Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CNOT6L_chr4_77708387_77824368	77714437	TTAAAAAA others(17): Show TTAAAAAAAAAAAAAAAAAAAAAAA	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA19075.hp2 NA19075.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0046 a0001c0001t0046	a0001c0001t0046g0246 a0001c0001t0046g0246	1	328	0.0031	-24	c.59 others(35): Show c.5970_*5993delTTTTTTTTTTTTTTTTTTTTTTTA	CNOT6L	ENSG00000138767.14	transcript	ENST00000504123.7	protein_coding	12/12	5970		chr4	TogoVar
CNOT6L_chr4_77708387_77824368	77743586	CTTTTTTT others(17): Show CTTTTTTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01993.hp1 HG01993.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0221 a0001c0001t0001g0221	1	328	0.0031	-24	c.717 others(41): Show c.717+1108_717+1131delAAAAAAAAAAAAAAAAAAAAAAAA	CNOT6L	ENSG00000138767.14	transcript	ENST00000504123.7	protein_coding	7/11			chr4	TogoVar
CNOT6L_chr4_77708387_77824368	77768470	AATAAATA others(17): Show AATAAATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00280.hp1 HG00280.hp2 others(236): Show HG00099.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG01069.hp1 HG01069.hp2 HG01081.hp1 HG01081.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01169.hp1 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp2 HG01891.hp1 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02015.hp1 HG02015.hp2 HG02055.hp1 HG02055.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp2 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp2 HG02258.hp2 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02572.hp1 HG02572.hp2 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02717.hp2 HG02735.hp2 HG02738.hp2 HG02809.hp1 HG02818.hp1 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03195.hp2 HG03225.hp1 HG03471.hp2 HG03486.hp2 HG03491.hp2 HG03516.hp2 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04204.hp1 HG04228.hp1 HG04228.hp2 HG06807.hp1 NA18522.hp1 NA18522.hp2 NA18747.hp2 NA18906.hp2 NA18939.hp2 NA18940.hp1 NA18941.hp1 NA18941.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp2 NA18950.hp2 NA18952.hp2 NA18953.hp2 NA18955.hp1 NA18955.hp2 NA18959.hp1 NA18959.hp2 NA18961.hp1 NA18963.hp1 NA18963.hp2 NA18964.hp2 NA18965.hp1 NA18965.hp2 NA18966.hp1 NA18966.hp2 NA18968.hp1 NA18968.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18974.hp2 NA18975.hp1 NA18975.hp2 NA18980.hp1 NA18980.hp2 NA18982.hp2 NA18984.hp1 NA18984.hp2 NA18989.hp1 NA18992.hp1 NA18992.hp2 NA18994.hp2 NA18995.hp1 NA18999.hp1 NA19002.hp1 NA19002.hp2 NA19004.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19030.hp1 NA19043.hp1 NA19043.hp2 NA19056.hp2 NA19058.hp1 NA19058.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19068.hp1 NA19075.hp2 NA19077.hp1 NA19077.hp2 NA19080.hp2 NA19086.hp2 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20752.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(28): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0010 a0001c0001t0013 a0001c0001t0016 a0001c0001t0018 a0001c0001t0019 a0001c0001t0021 a0001c0001t0022 a0001c0001t0023 a0001c0001t0024 a0001c0001t0025 a0001c0001t0026 a0001c0001t0027 a0001c0001t0028 a0001c0001t0031 a0001c0001t0042 a0001c0001t0043 a0001c0001t0044 a0001c0001t0045 a0001c0001t0046 a0001c0001t0047 a0001c0001t0048 a0001c0001t0049 a0001c0001t0050 a0001c0001t0054 a0001c0001t0055 a0002c0002t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0010 others(235): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0010 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0092 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0107 a0001c0001t0001g0109 a0001c0001t0001g0111 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0139 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0167 a0001c0001t0001g0173 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0189 a0001c0001t0001g0190 a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0001g0194 a0001c0001t0001g0195 a0001c0001t0001g0196 a0001c0001t0001g0199 a0001c0001t0001g0201 a0001c0001t0001g0204 a0001c0001t0001g0205 a0001c0001t0001g0209 a0001c0001t0001g0210 a0001c0001t0001g0214 a0001c0001t0001g0215 a0001c0001t0001g0216 a0001c0001t0001g0217 a0001c0001t0001g0219 a0001c0001t0001g0221 a0001c0001t0001g0224 a0001c0001t0001g0225 a0001c0001t0001g0226 a0001c0001t0001g0227 a0001c0001t0001g0229 a0001c0001t0001g0230 a0001c0001t0001g0231 a0001c0001t0001g0232 a0001c0001t0001g0233 a0001c0001t0001g0234 a0001c0001t0001g0235 a0001c0001t0001g0236 a0001c0001t0001g0237 a0001c0001t0001g0238 a0001c0001t0001g0239 a0001c0001t0001g0242 a0001c0001t0001g0243 a0001c0001t0001g0244 a0001c0001t0001g0245 a0001c0001t0001g0247 a0001c0001t0001g0248 a0001c0001t0001g0249 a0001c0001t0001g0252 a0001c0001t0001g0253 a0001c0001t0001g0254 a0001c0001t0001g0255 a0001c0001t0001g0256 a0001c0001t0001g0257 a0001c0001t0001g0259 a0001c0001t0001g0260 a0001c0001t0001g0262 a0001c0001t0001g0263 a0001c0001t0001g0265 a0001c0001t0001g0266 a0001c0001t0001g0267 a0001c0001t0001g0270 a0001c0001t0001g0271 a0001c0001t0001g0272 a0001c0001t0001g0273 a0001c0001t0001g0275 a0001c0001t0001g0276 a0001c0001t0001g0277 a0001c0001t0001g0278 a0001c0001t0001g0279 a0001c0001t0001g0280 a0001c0001t0001g0282 a0001c0001t0001g0283 a0001c0001t0001g0284 a0001c0001t0001g0285 a0001c0001t0001g0288 a0001c0001t0001g0292 a0001c0001t0001g0293 a0001c0001t0001g0294 a0001c0001t0001g0295 a0001c0001t0001g0296 a0001c0001t0001g0299 a0001c0001t0001g0304 a0001c0001t0001g0306 a0001c0001t0001g0308 a0001c0001t0001g0309 a0001c0001t0001g0314 a0001c0001t0001g0315 a0001c0001t0001g0316 a0001c0001t0001g0317 a0001c0001t0001g0321 a0001c0001t0001g0325 a0001c0001t0001g0326 a0001c0001t0003g0003 a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0003g0007 a0001c0001t0003g0008 a0001c0001t0003g0009 a0001c0001t0003g0093 a0001c0001t0003g0141 a0001c0001t0003g0142 a0001c0001t0003g0143 a0001c0001t0003g0144 a0001c0001t0003g0145 a0001c0001t0003g0146 a0001c0001t0003g0147 a0001c0001t0003g0148 a0001c0001t0003g0198 a0001c0001t0003g0322 a0001c0001t0004g0083 a0001c0001t0004g0115 a0001c0001t0004g0133 a0001c0001t0004g0134 a0001c0001t0004g0135 a0001c0001t0004g0136 a0001c0001t0004g0137 a0001c0001t0004g0156 a0001c0001t0004g0183 a0001c0001t0004g0197 a0001c0001t0004g0200 a0001c0001t0004g0324 a0001c0001t0005g0175 a0001c0001t0005g0176 a0001c0001t0005g0177 a0001c0001t0005g0178 a0001c0001t0005g0202 a0001c0001t0005g0203 a0001c0001t0005g0207 a0001c0001t0005g0208 a0001c0001t0005g0220 a0001c0001t0005g0240 a0001c0001t0006g0286 a0001c0001t0006g0290 a0001c0001t0006g0297 a0001c0001t0006g0298 a0001c0001t0006g0300 a0001c0001t0006g0301 a0001c0001t0006g0302 a0001c0001t0006g0303 a0001c0001t0006g0311 a0001c0001t0006g0312 a0001c0001t0010g0087 a0001c0001t0010g0088 a0001c0001t0010g0089 a0001c0001t0010g0090 a0001c0001t0010g0091 a0001c0001t0010g0157 a0001c0001t0013g0077 a0001c0001t0013g0168 a0001c0001t0013g0169 a0001c0001t0013g0170 a0001c0001t0016g0184 a0001c0001t0016g0185 a0001c0001t0016g0186 a0001c0001t0018g0250 a0001c0001t0018g0281 a0001c0001t0019g0106 a0001c0001t0019g0138 a0001c0001t0021g0287 a0001c0001t0021g0291 a0001c0001t0022g0289 a0001c0001t0023g0310 a0001c0001t0024g0319 a0001c0001t0025g0320 a0001c0001t0026g0181 a0001c0001t0027g0004 a0001c0001t0028g0211 a0001c0001t0031g0102 a0001c0001t0042g0251 a0001c0001t0043g0078 a0001c0001t0044g0112 a0001c0001t0045g0164 a0001c0001t0046g0246 a0001c0001t0047g0108 a0001c0001t0048g0258 a0001c0001t0049g0274 a0001c0001t0050g0182 a0001c0001t0054g0174 a0001c0001t0055g0305 a0002c0002t0001g0110	239	328	0.7287	-24	c.400 others(41): Show c.400+4587_400+4610delATATATATATATATATATATTTAT	CNOT6L	ENSG00000138767.14	transcript	ENST00000504123.7	protein_coding	4/11			chr4	TogoVar
CNOT6L_chr4_77708387_77824368	77768474	AATATATA others(17): Show AATATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG03453.hp2 HG03540.hp1 HG02451.hp1 HG03453.hp2 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0037 a0001c0001t0038 a0001c0001t0001 a0001c0001t0037 a0001c0001t0038	a0001c0001t0001g0140 a0001c0001t0037g0269 a0001c0001t0038g0223 a0001c0001t0001g0140 a0001c0001t0037g0269 a0001c0001t0038g0223	3	328	0.0092	-24	c.400 others(41): Show c.400+4583_400+4606delATATATATATATATATATATATAT	CNOT6L	ENSG00000138767.14	transcript	ENST00000504123.7	protein_coding	4/11			chr4	TogoVar
CNOT6_chr5_180489379_180583358	180539551	CTTTTTTT others(17): Show CTTTTTTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG01257.hp2 HG01358.hp2 others(14): Show HG00741.hp2 HG01257.hp2 HG01358.hp2 HG01516.hp2 HG01891.hp1 HG01993.hp1 HG02148.hp2 HG02257.hp1 HG02258.hp1 HG03225.hp2 HG03491.hp2 HG03942.hp1 NA18612.hp2 NA18947.hp1 NA18957.hp2 NA18961.hp2 NA18967.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0009 others(6): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0009 a0001c0001t0010 a0001c0001t0014 a0001c0001t0019 a0001c0001t0023 a0001c0001t0037 a0001c0001t0062	a0001c0001t0001g0265 a0001c0001t0003g0170 a0001c0001t0003g0181 others(14): Show a0001c0001t0001g0265 a0001c0001t0003g0170 a0001c0001t0003g0181 a0001c0001t0003g0184 a0001c0001t0003g0189 a0001c0001t0003g0191 a0001c0001t0009g0014 a0001c0001t0009g0173 a0001c0001t0009g0199 a0001c0001t0009g0210 a0001c0001t0010g0208 a0001c0001t0014g0175 a0001c0001t0019g0286 a0001c0001t0019g0292 a0001c0001t0023g0009 a0001c0001t0037g0171 a0001c0001t0062g0030	17	334	0.0509	-24	c.112 others(43): Show c.112+10196_112+10219delTTTTTTTTTTTTTTTTTTTTTTTT	CNOT6	ENSG00000113300.13	transcript	ENST00000261951.9	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr5	TogoVar
CNOT9_chr2_218563839_218602080	218583219	GTGTGTGT others(17): Show GTGTGTGTGTGTGTGTCTCTCTCTC	G G	intron_variant intron_variant	MODIFIER	NA18952.hp2 NA18952.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0213 a0001c0001t0004g0213	1	322	0.0031	-24	c.320 others(39): Show c.320+135_320+158delGTGTGTGTGTGTGTCTCTCTCTCT	CNOT9	ENSG00000144580.15	transcript	ENST00000273064.11	protein_coding	3/7		INFO_REALIGN_3_PRIME	chr2	TogoVar
CNOT9_chr2_218563839_218602080	218583221	GTGTGTGT others(17): Show GTGTGTGTGTGTGTCTCTCTCTCTC	G G	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG00621.hp1 HG02135.hp2 others(15): Show HG00558.hp2 HG00621.hp1 HG02135.hp2 HG02165.hp2 HG03017.hp1 HG03688.hp2 NA18957.hp1 NA18960.hp1 NA18966.hp2 NA18975.hp2 NA19009.hp2 NA19011.hp2 NA19056.hp1 NA19058.hp2 NA19084.hp1 NA19084.hp2 NA19088.hp2 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0010 a0001c0001t0048 others(1): Show a0001c0001t0004 a0001c0001t0010 a0001c0001t0048 a0001c0001t0049	a0001c0001t0004g0010 a0001c0001t0004g0038 a0001c0001t0004g0040 others(10): Show a0001c0001t0004g0010 a0001c0001t0004g0038 a0001c0001t0004g0040 a0001c0001t0004g0196 a0001c0001t0004g0197 a0001c0001t0004g0201 a0001c0001t0004g0202 a0001c0001t0004g0215 a0001c0001t0004g0217 a0001c0001t0004g0218 a0001c0001t0010g0214 a0001c0001t0048g0216 a0001c0001t0049g0212	18	322	0.0559	-24	c.320 others(39): Show c.320+137_320+160delGTGTGTGTGTGTCTCTCTCTCTCT	CNOT9	ENSG00000144580.15	transcript	ENST00000273064.11	protein_coding	3/7		INFO_REALIGN_3_PRIME	chr2	TogoVar
CNOT9_chr2_218563839_218602080	218583227	GTGTGTGT others(17): Show GTGTGTGTCTCTCTCTCTCTCTCTC	G G	intron_variant intron_variant	MODIFIER	HG02135.hp1 HG02135.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0076 a0001c0001t0003g0076	1	322	0.0031	-24	c.320 others(39): Show c.320+143_320+166delGTGTGTCTCTCTCTCTCTCTCTCT	CNOT9	ENSG00000144580.15	transcript	ENST00000273064.11	protein_coding	3/7		INFO_REALIGN_3_PRIME	chr2	TogoVar
CNOT9_chr2_218563839_218602080	218583231	GTGTCTCT others(17): Show GTGTCTCTCTCTCTCTCTCTCTCTC	G G	intron_variant intron_variant	MODIFIER	HG02155.hp1 HG03491.hp2 HG03492.hp2 others(2): Show HG02155.hp1 HG03491.hp2 HG03492.hp2 HG03927.hp1 NA18984.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0029 a0001c0001t0002 a0001c0001t0003 a0001c0001t0029	a0001c0001t0002g0026 a0001c0001t0003g0026 a0001c0001t0003g0027 others(1): Show a0001c0001t0002g0026 a0001c0001t0003g0026 a0001c0001t0003g0027 a0001c0001t0029g0082	5	322	0.0155	-24	c.320 others(39): Show c.320+147_320+170delGTCTCTCTCTCTCTCTCTCTCTCT	CNOT9	ENSG00000144580.15	transcript	ENST00000273064.11	protein_coding	3/7		INFO_REALIGN_3_PRIME	chr2	TogoVar
CNR1_chr6_88134864_88171347	88136582	GATTCATC others(17): Show GATTCATCTCATACTAAATGAGATA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00735.hp2 NA19043.hp1 HG00735.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0017 a0001c0001t0017	a0001c0001t0017g0070 a0001c0001t0017g0089 a0001c0001t0017g0070 a0001c0001t0017g0089	2	398	0.0050	-24	c.72 others(35): Show c.7250_*7273delTATCTCATTTAGTATGAGATGAAT	CNR1	ENSG00000118432.13	transcript	ENST00000369501.3	protein_coding		3281		chr6	TogoVar
CNRIP1_chr2_68288010_68324949	68305272	ATATGTGT others(17): Show ATATGTGTGTGTGTGTGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	HG02129.hp1 HG02735.hp1 HG02129.hp1 HG02735.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0025 a0001c0002t0001g0025	2	424	0.0047	-24	c.331 others(43): Show c.331-11270_331-11247delCACACACACACACACACACACATA	CNRIP1	ENSG00000119865.9	transcript	ENST00000263655.4	protein_coding	2/2			chr2	TogoVar
CNTLN_chr9_17130040_17508923	17237354	TACACACA others(17): Show TACACACACACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0020 a0020	a0020c0041 a0020c0041	a0020c0041t0001 a0020c0041t0001	a0020c0041t0001g0106 a0020c0041t0001g0106	1	218	0.0046	-24	c.849 others(39): Show c.849+795_849+818delACACACACACACACACACACACAC	CNTLN	ENSG00000044459.15	transcript	ENST00000380647.8	protein_coding	5/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
CNTLN_chr9_17130040_17508923	17295987	AGAGAGAG others(17): Show AGAGAGAGAGAGTGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG01109.hp2 NA18951.hp1 NA18978.hp2 HG01109.hp2 NA18951.hp1 NA18978.hp2	a0002 a0005 a0014 a0002 a0005 a0014	a0002c0006 a0005c0005 a0014c0034 a0002c0006 a0005c0005 a0014c0034	a0002c0006t0002 a0005c0005t0001 a0014c0034t0001 a0002c0006t0002 a0005c0005t0001 a0014c0034t0001	a0002c0006t0002g0144 a0005c0005t0001g0093 a0014c0034t0001g0088 a0002c0006t0002g0144 a0005c0005t0001g0093 a0014c0034t0001g0088	3	218	0.0138	-24	c.984 others(41): Show c.984-2201_984-2178delAGAGAGAGAGTGTGTGTGTGTGTG	CNTLN	ENSG00000044459.15	transcript	ENST00000380647.8	protein_coding	6/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
CNTN1_chr12_40687439_41077415	40767993	CATTTCTA others(17): Show CATTTCTATACTGATATACTTCTAA	C C	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(217): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00438.hp1 HG00438.hp2 HG00621.hp1 HG00621.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01074.hp1 HG01074.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01258.hp1 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01981.hp1 HG01981.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02055.hp1 HG02055.hp2 HG02071.hp1 HG02071.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02257.hp1 HG02257.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02300.hp1 HG02300.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02615.hp1 HG02622.hp1 HG02622.hp2 HG02717.hp1 HG02717.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp2 HG02895.hp1 HG02897.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03704.hp1 HG03704.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04115.hp2 NA18522.hp1 NA18747.hp1 NA18747.hp2 NA18906.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18950.hp1 NA18950.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18953.hp2 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18959.hp2 NA18961.hp1 NA18961.hp2 NA18964.hp1 NA18964.hp2 NA18970.hp1 NA18970.hp2 NA18972.hp1 NA18972.hp2 NA18973.hp1 NA18973.hp2 NA18974.hp1 NA18974.hp2 NA18977.hp1 NA18977.hp2 NA18980.hp1 NA18980.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18988.hp1 NA18988.hp2 NA18989.hp1 NA18989.hp2 NA19006.hp1 NA19006.hp2 NA19007.hp1 NA19007.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19062.hp1 NA19062.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19079.hp1 NA19079.hp2 NA19083.hp1 NA19083.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA21309.hp1 NA21309.hp2	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0005	a0001c0001 a0001c0002 a0001c0003 others(10): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0009 a0001c0012 a0001c0013 a0002c0007 a0003c0008 a0004c0011 a0005c0010	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(44): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0009 a0001c0001t0010 a0001c0001t0012 a0001c0001t0013 a0001c0001t0014 a0001c0001t0015 a0001c0001t0017 a0001c0001t0018 a0001c0001t0024 a0001c0001t0026 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0004 a0001c0002t0005 a0001c0002t0010 a0001c0002t0022 a0001c0002t0023 a0001c0002t0027 a0001c0003t0002 a0001c0003t0003 a0001c0003t0005 a0001c0003t0011 a0001c0003t0016 a0001c0003t0019 a0001c0003t0020 a0001c0004t0001 a0001c0004t0003 a0001c0004t0007 a0001c0005t0002 a0001c0005t0007 a0001c0005t0025 a0001c0006t0006 a0001c0009t0004 a0001c0012t0021 a0001c0013t0001 a0002c0007t0008 a0003c0008t0002 a0004c0011t0001 a0005c0010t0002	a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0042 others(217): Show a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0049 a0001c0001t0001g0063 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0095 a0001c0001t0001g0101 a0001c0001t0001g0105 a0001c0001t0001g0107 a0001c0001t0001g0114 a0001c0001t0001g0118 a0001c0001t0001g0152 a0001c0001t0001g0160 a0001c0001t0001g0177 a0001c0001t0001g0188 a0001c0001t0001g0201 a0001c0001t0001g0206 a0001c0001t0001g0208 a0001c0001t0001g0212 a0001c0001t0001g0218 a0001c0001t0001g0223 a0001c0001t0001g0228 a0001c0001t0001g0229 a0001c0001t0001g0230 a0001c0001t0002g0005 a0001c0001t0002g0016 a0001c0001t0002g0019 a0001c0001t0002g0027 a0001c0001t0002g0030 a0001c0001t0002g0045 a0001c0001t0002g0059 a0001c0001t0002g0067 a0001c0001t0002g0069 a0001c0001t0002g0087 a0001c0001t0002g0091 a0001c0001t0002g0094 a0001c0001t0002g0096 a0001c0001t0002g0100 a0001c0001t0002g0110 a0001c0001t0002g0113 a0001c0001t0002g0130 a0001c0001t0002g0131 a0001c0001t0002g0141 a0001c0001t0002g0146 a0001c0001t0002g0153 a0001c0001t0002g0158 a0001c0001t0002g0159 a0001c0001t0002g0175 a0001c0001t0002g0176 a0001c0001t0002g0180 a0001c0001t0002g0209 a0001c0001t0002g0220 a0001c0001t0003g0023 a0001c0001t0003g0084 a0001c0001t0003g0120 a0001c0001t0003g0150 a0001c0001t0003g0151 a0001c0001t0003g0154 a0001c0001t0003g0166 a0001c0001t0003g0200 a0001c0001t0003g0222 a0001c0001t0003g0224 a0001c0001t0004g0029 a0001c0001t0004g0054 a0001c0001t0004g0086 a0001c0001t0004g0093 a0001c0001t0004g0115 a0001c0001t0004g0134 a0001c0001t0004g0137 a0001c0001t0004g0170 a0001c0001t0004g0179 a0001c0001t0004g0184 a0001c0001t0004g0216 a0001c0001t0004g0225 a0001c0001t0005g0020 a0001c0001t0005g0135 a0001c0001t0006g0106 a0001c0001t0006g0138 a0001c0001t0006g0139 a0001c0001t0006g0140 a0001c0001t0007g0055 a0001c0001t0007g0058 a0001c0001t0009g0181 a0001c0001t0009g0182 a0001c0001t0009g0183 a0001c0001t0010g0202 a0001c0001t0012g0012 a0001c0001t0012g0125 a0001c0001t0013g0133 a0001c0001t0013g0211 a0001c0001t0014g0074 a0001c0001t0014g0185 a0001c0001t0015g0219 a0001c0001t0017g0187 a0001c0001t0018g0048 a0001c0001t0024g0167 a0001c0001t0026g0190 a0001c0002t0001g0001 a0001c0002t0001g0013 a0001c0002t0001g0014 a0001c0002t0001g0022 a0001c0002t0001g0024 a0001c0002t0001g0025 a0001c0002t0001g0028 a0001c0002t0001g0031 a0001c0002t0001g0032 a0001c0002t0001g0033 a0001c0002t0001g0034 a0001c0002t0001g0035 a0001c0002t0001g0036 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0044 a0001c0002t0001g0047 a0001c0002t0001g0068 a0001c0002t0001g0083 a0001c0002t0001g0085 a0001c0002t0001g0088 a0001c0002t0001g0089 a0001c0002t0001g0090 a0001c0002t0001g0092 a0001c0002t0001g0099 a0001c0002t0001g0102 a0001c0002t0001g0103 a0001c0002t0001g0109 a0001c0002t0001g0111 a0001c0002t0001g0112 a0001c0002t0001g0116 a0001c0002t0001g0121 a0001c0002t0001g0124 a0001c0002t0001g0129 a0001c0002t0001g0132 a0001c0002t0001g0136 a0001c0002t0001g0142 a0001c0002t0001g0145 a0001c0002t0001g0147 a0001c0002t0001g0149 a0001c0002t0001g0156 a0001c0002t0001g0157 a0001c0002t0001g0161 a0001c0002t0001g0162 a0001c0002t0001g0163 a0001c0002t0001g0164 a0001c0002t0001g0169 a0001c0002t0001g0174 a0001c0002t0001g0189 a0001c0002t0001g0194 a0001c0002t0001g0195 a0001c0002t0001g0196 a0001c0002t0001g0197 a0001c0002t0001g0198 a0001c0002t0001g0203 a0001c0002t0001g0205 a0001c0002t0001g0215 a0001c0002t0002g0221 a0001c0002t0003g0060 a0001c0002t0003g0075 a0001c0002t0004g0117 a0001c0002t0005g0098 a0001c0002t0010g0126 a0001c0002t0010g0127 a0001c0002t0022g0172 a0001c0002t0023g0144 a0001c0002t0027g0041 a0001c0003t0002g0108 a0001c0003t0002g0128 a0001c0003t0003g0061 a0001c0003t0003g0064 a0001c0003t0003g0065 a0001c0003t0003g0066 a0001c0003t0005g0070 a0001c0003t0005g0071 a0001c0003t0005g0072 a0001c0003t0005g0082 a0001c0003t0005g0104 a0001c0003t0005g0155 a0001c0003t0005g0178 a0001c0003t0005g0191 a0001c0003t0005g0193 a0001c0003t0011g0199 a0001c0003t0011g0227 a0001c0003t0016g0226 a0001c0003t0019g0056 a0001c0003t0020g0165 a0001c0004t0001g0217 a0001c0004t0003g0168 a0001c0004t0003g0171 a0001c0004t0007g0057 a0001c0004t0007g0213 a0001c0004t0007g0214 a0001c0005t0002g0053 a0001c0005t0002g0062 a0001c0005t0002g0081 a0001c0005t0002g0173 a0001c0005t0002g0207 a0001c0005t0002g0210 a0001c0005t0007g0148 a0001c0005t0025g0052 a0001c0006t0006g0015 a0001c0006t0006g0017 a0001c0006t0006g0018 a0001c0006t0006g0021 a0001c0006t0006g0051 a0001c0006t0006g0119 a0001c0009t0004g0046 a0001c0012t0021g0204 a0001c0013t0001g0050 a0002c0007t0008g0122 a0002c0007t0008g0123 a0002c0007t0008g0186 a0002c0007t0008g0192 a0003c0008t0002g0143 a0004c0011t0001g0097 a0005c0010t0002g0026	220	230	0.9565	-24	c.-77 others(43): Show c.-77+75403_-77+75426delTTTCTATACTGATATACTTCTAAA	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding	1/23		INFO_REALIGN_3_PRIME	chr12	TogoVar
CNTN1_chr12_40687439_41077415	40830791	GTATATAT others(17): Show GTATATATATATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00408.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0100 a0001c0001t0002g0100	1	230	0.0044	-24	c.-76 others(43): Show c.-76-77545_-76-77522delTATATATATATATATATATATATA	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding	1/23		INFO_REALIGN_3_PRIME	chr12	TogoVar
CNTN1_chr12_40687439_41077415	40836068	GTATATAT others(17): Show GTATATATACGTACATATACAGGTA	G G	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00280.hp1 HG00323.hp1 others(24): Show HG00099.hp1 HG00280.hp1 HG00323.hp1 HG00438.hp1 HG00642.hp1 HG01069.hp2 HG01099.hp1 HG01106.hp2 HG01255.hp1 HG01346.hp2 HG01361.hp1 HG02145.hp1 HG02273.hp1 HG02280.hp1 HG02300.hp1 HG02559.hp1 HG02572.hp2 HG02895.hp2 HG02897.hp1 HG03098.hp1 HG03209.hp2 HG03704.hp2 HG03834.hp2 NA18522.hp1 NA19030.hp2 NA21309.hp1 NA21309.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0001c0003 a0001c0004 others(3): Show a0001c0001 a0001c0003 a0001c0004 a0001c0006 a0001c0009 a0003c0008	a0001c0001t0002 a0001c0001t0007 a0001c0003t0005 others(7): Show a0001c0001t0002 a0001c0001t0007 a0001c0003t0005 a0001c0003t0011 a0001c0003t0016 a0001c0004t0001 a0001c0004t0007 a0001c0006t0006 a0001c0009t0004 a0003c0008t0002	a0001c0001t0002g0059 a0001c0001t0007g0058 a0001c0003t0005g0070 others(24): Show a0001c0001t0002g0059 a0001c0001t0007g0058 a0001c0003t0005g0070 a0001c0003t0005g0071 a0001c0003t0005g0072 a0001c0003t0005g0082 a0001c0003t0005g0104 a0001c0003t0005g0155 a0001c0003t0005g0178 a0001c0003t0005g0191 a0001c0003t0005g0193 a0001c0003t0011g0199 a0001c0003t0011g0227 a0001c0003t0016g0226 a0001c0004t0001g0217 a0001c0004t0007g0003 a0001c0004t0007g0004 a0001c0004t0007g0213 a0001c0004t0007g0214 a0001c0006t0006g0015 a0001c0006t0006g0017 a0001c0006t0006g0018 a0001c0006t0006g0021 a0001c0006t0006g0051 a0001c0006t0006g0119 a0001c0009t0004g0046 a0003c0008t0002g0143	27	230	0.1174	-24	c.-76 others(43): Show c.-76-72236_-76-72213delTATACGTACATATACAGGTATATA	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding	1/23		INFO_REALIGN_3_PRIME	chr12	TogoVar
CNTN1_chr12_40687439_41077415	40975178	TTATATAT others(17): Show TTATATATATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02257.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0004	a0001c0002t0004g0117 a0001c0002t0004g0117	1	230	0.0044	-24	c.180 others(43): Show c.1805-5709_1805-5686delATATATATATATATATATATATAT	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding	15/23		INFO_REALIGN_3_PRIME	chr12	TogoVar
CNTN3_chr3_74257568_74619659	74285790	GATATATA others(17): Show GATATATATATATATATATATATAT	G G	intron_variant intron_variant	MODIFIER	HG03017.hp1 HG03017.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0132 a0001c0002t0001g0132	1	174	0.0058	-24	c.251 others(41): Show c.2518-323_2518-300delATATATATATATATATATATATAT	CNTN3	ENSG00000113805.9	transcript	ENST00000263665.7	protein_coding	19/22			chr3	TogoVar
CNTN3_chr3_74257568_74619659	74344396	GGTTTTTT others(17): Show GGTTTTTTTTTTTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG01346.hp2 HG01884.hp1 HG01978.hp2 others(14): Show HG01346.hp2 HG01884.hp1 HG01978.hp2 HG02027.hp1 HG02129.hp1 HG02129.hp2 HG02257.hp2 HG02293.hp2 HG03098.hp1 HG03471.hp1 HG03669.hp2 HG03710.hp2 NA18951.hp2 NA18956.hp2 NA18977.hp1 NA18977.hp2 NA20905.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0004 a0001c0001 a0001c0002 a0002c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(10): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0006 a0001c0001t0009 a0001c0001t0017 a0001c0001t0018 a0001c0002t0001 a0001c0002t0005 a0001c0002t0006 a0001c0002t0021 a0001c0002t0025 a0002c0004t0006	a0001c0001t0001g0112 a0001c0001t0001g0140 a0001c0001t0002g0038 others(14): Show a0001c0001t0001g0112 a0001c0001t0001g0140 a0001c0001t0002g0038 a0001c0001t0002g0082 a0001c0001t0005g0169 a0001c0001t0006g0149 a0001c0001t0009g0084 a0001c0001t0009g0086 a0001c0001t0017g0171 a0001c0001t0018g0173 a0001c0002t0001g0107 a0001c0002t0005g0155 a0001c0002t0005g0166 a0001c0002t0006g0167 a0001c0002t0021g0010 a0001c0002t0025g0087 a0002c0004t0006g0145	17	174	0.0977	-24	c.136 others(43): Show c.1365-7762_1365-7739delAAAAAAAAAAAAAAAAAAAAAAAC	CNTN3	ENSG00000113805.9	transcript	ENST00000263665.7	protein_coding	11/22			chr3	TogoVar
CNTN3_chr3_74257568_74619659	74344397	GTTTTTTT others(17): Show GTTTTTTTTTTTTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG02293.hp1 HG02451.hp2 HG02922.hp1 others(1): Show HG02293.hp1 HG02451.hp2 HG02922.hp1 NA20300.hp1	a0001 a0003 a0001 a0003	a0001c0010 a0003c0003 a0003c0026 a0001c0010 a0003c0003 a0003c0026	a0001c0010t0003 a0003c0003t0002 a0003c0003t0007 others(1): Show a0001c0010t0003 a0003c0003t0002 a0003c0003t0007 a0003c0026t0010	a0001c0010t0003g0025 a0003c0003t0002g0079 a0003c0003t0007g0074 others(1): Show a0001c0010t0003g0025 a0003c0003t0002g0079 a0003c0003t0007g0074 a0003c0026t0010g0005	4	174	0.0230	-24	c.136 others(43): Show c.1365-7763_1365-7740delAAAAAAAAAAAAAAAAAAAAAAAA	CNTN3	ENSG00000113805.9	transcript	ENST00000263665.7	protein_coding	11/22			chr3	TogoVar
CNTN3_chr3_74257568_74619659	74614433	TCGCCGCC others(17): Show TCGCCGCCGCCGCCGCCGCCGCCGC	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02809.hp1 HG02965.hp2 HG02809.hp1 HG02965.hp2	a0001 a0003 a0001 a0003	a0001c0002 a0003c0003 a0001c0002 a0003c0003	a0001c0002t0012 a0003c0003t0012 a0001c0002t0012 a0003c0003t0012	a0001c0002t0012g0011 a0003c0003t0012g0012 a0001c0002t0012g0011 a0003c0003t0012g0012	2	174	0.0115	-24	c.-14 others(33): Show c.-147_-124delGCGGCGGCGGCGGCGGCGGCGGCG	CNTN3	ENSG00000113805.9	transcript	ENST00000263665.7	protein_coding	1/23	93322		chr3	TogoVar
CNTN4_chr3_2093866_3062959	2287626	GAGAAGGA others(17): Show GAGAAGGAGAAGAAGAAGAAGAAGA	G G	intron_variant intron_variant	MODIFIER	NA18990.hp2 NA18990.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0075 a0001c0003t0001g0075	1	116	0.0086	-24	c.-14 others(45): Show c.-144-51546_-144-51523delGAGAAGAAGAAGAAGAAGAAGAAG	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	2/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2287687	AGAAGAGG others(17): Show AGAAGAGGAAGAAGAAGAAGAAGAG	A A	intron_variant intron_variant	MODIFIER	HG01978.hp2 HG03130.hp1 HG03130.hp2 HG01978.hp2 HG03130.hp1 HG03130.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0001c0003 a0002c0016 a0001c0002 a0001c0003 a0002c0016	a0001c0002t0001 a0001c0003t0002 a0002c0016t0003 a0001c0002t0001 a0001c0003t0002 a0002c0016t0003	a0001c0002t0001g0108 a0001c0003t0002g0073 a0002c0016t0003g0079 a0001c0002t0001g0108 a0001c0003t0002g0073 a0002c0016t0003g0079	3	116	0.0259	-24	c.-14 others(45): Show c.-144-51485_-144-51462delGGAAGAAGAAGAAGAAGAGGAAGA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	2/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2287693	GGAAGAAG others(17): Show GGAAGAAGAAGAAGAAGAGGAAGAA	G G	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG02074.hp1 HG02818.hp2 HG00438.hp1 HG02074.hp1 HG02818.hp2	a0001 a0001	a0001c0001 a0001c0009 a0001c0013 a0001c0001 a0001c0009 a0001c0013	a0001c0001t0002 a0001c0009t0004 a0001c0013t0007 a0001c0001t0002 a0001c0009t0004 a0001c0013t0007	a0001c0001t0002g0074 a0001c0009t0004g0005 a0001c0013t0007g0056 a0001c0001t0002g0074 a0001c0009t0004g0005 a0001c0013t0007g0056	3	116	0.0259	-24	c.-14 others(45): Show c.-144-51467_-144-51444delGGAAGAAGAAGAAGAAGAAGAAGA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	2/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2374018	AGGATTAG others(17): Show AGGATTAGGAGAACTTTTGTTCTCC	A A	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02647.hp2 HG02818.hp2 HG02257.hp2 HG02647.hp2 HG02818.hp2	a0001 a0001	a0001c0001 a0001c0010 a0001c0013 a0001c0001 a0001c0010 a0001c0013	a0001c0001t0008 a0001c0010t0003 a0001c0013t0007 a0001c0001t0008 a0001c0010t0003 a0001c0013t0007	a0001c0001t0008g0089 a0001c0010t0003g0011 a0001c0013t0007g0056 a0001c0001t0008g0089 a0001c0010t0003g0011 a0001c0013t0007g0056	3	116	0.0259	-24	c.-89 others(43): Show c.-89+34788_-89+34811delATTAGGAGAACTTTTGTTCTCCGG	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	3/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2547230	ATATTTAT others(17): Show ATATTTATTTATTTATTTATTTATT	A A	intron_variant intron_variant	MODIFIER	HG01257.hp1 HG01257.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0001 a0001c0004t0001	a0001c0004t0001g0106 a0001c0004t0001g0106	1	116	0.0086	-24	c.-88 others(43): Show c.-88-24160_-88-24137delATTTATTTATTTATTTATTTATTT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	3/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2708727	TCACACAC others(17): Show TCACACACACACACACACACACACA	T T	intron_variant intron_variant	MODIFIER	HG01175.hp2 HG01175.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0006 a0001c0003t0006	a0001c0003t0006g0040 a0001c0003t0006g0040	1	116	0.0086	-24	c.56- others(41): Show c.56-27470_56-27447delACACACACACACACACACACACAC	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	4/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2742556	ACAGCGAA others(17): Show ACAGCGAATCCTATAGATACCCTCC	A A	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00140.hp2 HG00438.hp2 others(101): Show HG00140.hp1 HG00140.hp2 HG00438.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01243.hp1 HG01243.hp2 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01261.hp2 HG01361.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01978.hp1 HG01978.hp2 HG02074.hp1 HG02074.hp2 HG02132.hp1 HG02132.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02717.hp1 HG02717.hp2 HG02738.hp1 HG02809.hp1 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02897.hp1 HG02897.hp2 HG02965.hp1 HG02965.hp2 HG03041.hp1 HG03041.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03209.hp1 HG03209.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03516.hp1 HG03540.hp1 HG03540.hp2 HG03654.hp1 HG03654.hp2 HG03831.hp1 HG03831.hp2 HG03927.hp1 HG03927.hp2 HG04184.hp1 HG04184.hp2 HG06807.hp1 HG06807.hp2 NA18906.hp1 NA18990.hp1 NA18990.hp2 NA19043.hp1 NA19043.hp2 NA20300.hp1 NA20300.hp2	a0001 a0002 a0003 others(5): Show a0001 a0002 a0003 a0004 a0006 a0007 a0008 a0009	a0001c0001 a0001c0002 a0001c0003 others(23): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0007 a0001c0009 a0001c0010 a0001c0013 a0001c0020 a0001c0021 a0001c0022 a0001c0023 a0001c0024 a0001c0025 a0002c0014 a0002c0015 a0002c0016 a0002c0017 a0003c0008 a0004c0011 a0006c0028 a0007c0018 a0008c0026 a0009c0027	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(49): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0008 a0001c0001t0009 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0005 a0001c0002t0006 a0001c0002t0007 a0001c0002t0012 a0001c0003t0001 a0001c0003t0002 a0001c0003t0003 a0001c0003t0006 a0001c0003t0011 a0001c0004t0001 a0001c0004t0002 a0001c0004t0006 a0001c0005t0001 a0001c0005t0006 a0001c0005t0009 a0001c0005t0010 a0001c0006t0002 a0001c0006t0003 a0001c0006t0004 a0001c0007t0003 a0001c0007t0016 a0001c0009t0004 a0001c0009t0014 a0001c0010t0003 a0001c0013t0007 a0001c0020t0002 a0001c0021t0002 a0001c0022t0003 a0001c0023t0004 a0001c0024t0015 a0001c0025t0001 a0002c0014t0001 a0002c0015t0003 a0002c0016t0003 a0002c0017t0008 a0003c0008t0001 a0003c0008t0013 a0004c0011t0003 a0006c0028t0001 a0007c0018t0003 a0008c0026t0017 a0009c0027t0001	a0001c0001t0001g0012 a0001c0001t0001g0033 a0001c0001t0001g0049 others(101): Show a0001c0001t0001g0012 a0001c0001t0001g0033 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0059 a0001c0001t0001g0099 a0001c0001t0002g0028 a0001c0001t0002g0030 a0001c0001t0002g0055 a0001c0001t0002g0086 a0001c0001t0003g0006 a0001c0001t0003g0008 a0001c0001t0003g0058 a0001c0001t0003g0095 a0001c0001t0003g0101 a0001c0001t0004g0081 a0001c0001t0005g0054 a0001c0001t0005g0098 a0001c0001t0005g0115 a0001c0001t0008g0043 a0001c0001t0008g0053 a0001c0001t0008g0089 a0001c0001t0009g0052 a0001c0002t0001g0021 a0001c0002t0001g0029 a0001c0002t0001g0038 a0001c0002t0001g0108 a0001c0002t0001g0110 a0001c0002t0002g0035 a0001c0002t0002g0063 a0001c0002t0002g0078 a0001c0002t0002g0102 a0001c0002t0003g0024 a0001c0002t0003g0114 a0001c0002t0005g0002 a0001c0002t0005g0003 a0001c0002t0006g0071 a0001c0002t0007g0009 a0001c0002t0007g0080 a0001c0002t0007g0087 a0001c0002t0012g0013 a0001c0003t0001g0014 a0001c0003t0001g0037 a0001c0003t0001g0045 a0001c0003t0001g0075 a0001c0003t0001g0094 a0001c0003t0001g0116 a0001c0003t0002g0061 a0001c0003t0002g0073 a0001c0003t0002g0107 a0001c0003t0003g0015 a0001c0003t0003g0046 a0001c0003t0003g0070 a0001c0003t0006g0040 a0001c0003t0011g0113 a0001c0004t0001g0020 a0001c0004t0001g0036 a0001c0004t0001g0097 a0001c0004t0001g0106 a0001c0004t0002g0022 a0001c0004t0002g0048 a0001c0004t0002g0064 a0001c0004t0002g0076 a0001c0004t0006g0044 a0001c0004t0006g0068 a0001c0005t0001g0090 a0001c0005t0001g0092 a0001c0005t0001g0096 a0001c0005t0001g0104 a0001c0005t0006g0010 a0001c0005t0006g0032 a0001c0005t0009g0091 a0001c0005t0010g0001 a0001c0005t0010g0085 a0001c0006t0002g0026 a0001c0006t0002g0051 a0001c0006t0002g0060 a0001c0006t0003g0069 a0001c0006t0004g0004 a0001c0007t0003g0034 a0001c0007t0016g0105 a0001c0009t0004g0005 a0001c0009t0014g0039 a0001c0010t0003g0011 a0001c0010t0003g0077 a0001c0013t0007g0056 a0001c0020t0002g0082 a0001c0021t0002g0025 a0001c0022t0003g0083 a0001c0023t0004g0041 a0001c0024t0015g0057 a0001c0025t0001g0100 a0002c0014t0001g0016 a0002c0015t0003g0103 a0002c0016t0003g0079 a0002c0017t0008g0067 a0003c0008t0001g0084 a0003c0008t0013g0109 a0004c0011t0003g0065 a0004c0011t0003g0111 a0006c0028t0001g0023 a0007c0018t0003g0062 a0008c0026t0017g0047 a0009c0027t0001g0007	104	116	0.8966	-24	c.183 others(41): Show c.183-2961_183-2938delGAATCCTATAGATACCCTCCCAGC	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	5/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN5_chr11_99015949_100363885	99284600	GGTGTGTG others(17): Show GGTGTGTGTGTGTGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG02735.hp1 HG02735.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0032 a0001c0001t0006g0032	1	66	0.0152	-24	c.-20 others(45): Show c.-209-40708_-209-40685delTGTGTGTGTGTGTGTGTGTGTGTG	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	1/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99422516	TTTTATAT others(17): Show TTTTATATATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG03130.hp2 HG03130.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0040 a0001c0001t0006g0040	1	66	0.0152	-24	c.-71 others(43): Show c.-71+97034_-71+97057delTTATATATATATATATATATATAT	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	2/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99889291	GGTGTGTG others(17): Show GGTGTGTGTGTGTGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	NA19000.hp1 NA19000.hp1	a0006 a0006	a0006c0006 a0006c0006	a0006c0006t0014 a0006c0006t0014	a0006c0006t0014g0058 a0006c0006t0014g0058	1	66	0.0152	-24	c.578 others(43): Show c.578-26720_578-26697delGTGTGTGTGTGTGTGTGTGTGTGT	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	6/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99923753	GTCTGTCT others(17): Show GTCTGTCTATCTATCTATCTATCTA	G G	intron_variant intron_variant	MODIFIER	NA19000.hp1 NA19000.hp1	a0006 a0006	a0006c0006 a0006c0006	a0006c0006t0014 a0006c0006t0014	a0006c0006t0014g0058 a0006c0006t0014g0058	1	66	0.0152	-24	c.673 others(41): Show c.673+7608_673+7631delGTCTATCTATCTATCTATCTATCT	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	7/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99934925	TATATATA others(17): Show TATATATATATATATATATATATAC	T T	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG01099.hp2 HG03130.hp1 others(1): Show HG00738.hp1 HG01099.hp2 HG03130.hp1 NA20300.hp2	a0002 a0005 a0012 a0002 a0005 a0012	a0002c0002 a0005c0005 a0012c0013 a0002c0002 a0005c0005 a0012c0013	a0002c0002t0003 a0005c0005t0001 a0012c0013t0008 a0002c0002t0003 a0005c0005t0001 a0012c0013t0008	a0002c0002t0003g0036 a0002c0002t0003g0037 a0005c0005t0001g0035 others(1): Show a0002c0002t0003g0036 a0002c0002t0003g0037 a0005c0005t0001g0035 a0012c0013t0008g0031	4	66	0.0606	-24	c.673 others(43): Show c.673+18778_673+18801delTATATATATATATATATATATACA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	7/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	100094765	AAAGGAAG others(17): Show AAAGGAAGGAAGGAAGGAAGGAAGG	A A	intron_variant intron_variant	MODIFIER	HG01169.hp1 HG01496.hp2 HG01934.hp1 others(1): Show HG01169.hp1 HG01496.hp2 HG01934.hp1 NA18957.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0009 a0001c0001t0012 a0001c0001t0001 a0001c0001t0009 a0001c0001t0012	a0001c0001t0001g0052 a0001c0001t0009g0043 a0001c0001t0012g0018 others(1): Show a0001c0001t0001g0052 a0001c0001t0009g0043 a0001c0001t0012g0018 a0001c0001t0012g0030	4	66	0.0606	-24	c.158 others(45): Show c.1580+20502_1580+20525delGGAAGGAAGGAAGGAAGGAAGGAA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	13/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	100155691	TTCCTTGA others(17): Show TTCCTTGAGCAGTGGTTTGTAGTTC	T T	intron_variant intron_variant	MODIFIER	HG03041.hp1 HG03041.hp1	a0009 a0009	a0009c0012 a0009c0012	a0009c0012t0008 a0009c0012t0008	a0009c0012t0008g0026 a0009c0012t0008g0026	1	66	0.0152	-24	c.158 others(45): Show c.1581-35426_1581-35403delCAGTGGTTTGTAGTTCTCCTTGAG	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	13/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN6_chr3_1088024_1409217	1300557	AAAAGAAA others(17): Show AAAAGAAAGAAAGAAAGAAAGAAAG	A A	intron_variant intron_variant	MODIFIER	HG01123.hp1 HG02896.hp2 HG03516.hp2 HG01123.hp1 HG02896.hp2 HG03516.hp2	a0001 a0001	a0001c0002 a0001c0003 a0001c0006 a0001c0002 a0001c0003 a0001c0006	a0001c0002t0001 a0001c0003t0001 a0001c0006t0001 a0001c0002t0001 a0001c0003t0001 a0001c0006t0001	a0001c0002t0001g0094 a0001c0003t0001g0219 a0001c0006t0001g0210 a0001c0002t0001g0094 a0001c0003t0001g0219 a0001c0006t0001g0210	3	232	0.0129	-24	c.761 others(41): Show c.761+2592_761+2615delAAGAAAGAAAGAAAGAAAGAAAGA	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding	7/22		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN6_chr3_1088024_1409217	1406922	TTCAGGCC others(17): Show TTCAGGCCTTCACCAGATTGGATGA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19000.hp1 NA19000.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0053 a0001c0002t0001g0053	1	232	0.0043	-24	c.35 others(35): Show c.3505_*3528delTCAGGCCTTCACCAGATTGGATGA	CNTN6	ENSG00000134115.13	transcript	ENST00000446702.7	protein_coding		2706		chr3	TogoVar
CNTNAP1_chr17_42677531_42704993	42685742	ATGAAATA others(17): Show ATGAAATAGAAGCAGCTCATGTGTT	A A	intron_variant intron_variant	MODIFIER	NA18968.hp2 NA18968.hp2	a0003 a0003	a0003c0012 a0003c0012	a0003c0012t0001 a0003c0012t0001	a0003c0012t0001g0062 a0003c0012t0001g0062	1	364	0.0028	-24	c.716 others(39): Show c.716-214_716-191delTGAAATAGAAGCAGCTCATGTGTT	CNTNAP1	ENSG00000108797.12	transcript	ENST00000264638.9	protein_coding	5/23			chr17	TogoVar
CNTNAP2_chr7_146111801_148425998	146151674	ATATATAT others(17): Show ATATATATGTATATATATATATATG	A A	intron_variant intron_variant	MODIFIER	HG03540.hp1 HG03540.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0010 a0001c0002t0010	a0001c0002t0010g0002 a0001c0002t0010g0002	1	40	0.0250	-24	c.97+ others(41): Show c.97+34709_97+34732delGTATATATATATATATGTATATAT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23		INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146457481	AATATATA others(17): Show AATATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02896.hp1 HG02451.hp2 HG02896.hp1	a0001 a0005 a0001 a0005	a0001c0001 a0005c0020 a0001c0001 a0005c0020	a0001c0001t0002 a0005c0020t0005 a0001c0001t0002 a0005c0020t0005	a0001c0001t0002g0006 a0005c0020t0005g0016 a0001c0001t0002g0006 a0005c0020t0005g0016	2	40	0.0500	-24	c.98- others(43): Show c.98-316758_98-316735delTATATATATATATATATATATATA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23		INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146477624	AACACACA others(17): Show AACACACACACACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG02717.hp1	a0002 a0002	a0002c0017 a0002c0017	a0002c0017t0015 a0002c0017t0015	a0002c0017t0015g0037 a0002c0017t0015g0037	1	40	0.0250	-24	c.98- others(43): Show c.98-296619_98-296596delCACACACACACACACACACACACA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23		INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146721562	CTATATAT others(17): Show CTATATATATTCTATATACATTCTA	C C	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02486.hp2 HG02717.hp1 others(7): Show HG02451.hp1 HG02486.hp2 HG02717.hp1 HG02897.hp1 HG02976.hp1 HG03139.hp1 NA19030.hp1 NA19030.hp2 NA21309.hp1 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(5): Show a0001c0001 a0001c0002 a0001c0003 a0001c0008 a0001c0010 a0001c0015 a0002c0016 a0002c0017	a0001c0001t0001 a0001c0001t0018 a0001c0002t0001 others(6): Show a0001c0001t0001 a0001c0001t0018 a0001c0002t0001 a0001c0003t0011 a0001c0008t0001 a0001c0010t0002 a0001c0015t0001 a0002c0016t0004 a0002c0017t0015	a0001c0001t0001g0038 a0001c0001t0018g0001 a0001c0002t0001g0007 others(7): Show a0001c0001t0001g0038 a0001c0001t0018g0001 a0001c0002t0001g0007 a0001c0002t0001g0008 a0001c0003t0011g0023 a0001c0008t0001g0025 a0001c0010t0002g0014 a0001c0015t0001g0011 a0002c0016t0004g0024 a0002c0017t0015g0037	10	40	0.2500	-24	c.98- others(41): Show c.98-52653_98-52630delATTCTATATACATTCTATATATAT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	1/23		INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	146855807	GTATATAT others(17): Show GTATATATATATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG03540.hp1 HG03540.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0010 a0001c0002t0010	a0001c0002t0010g0002 a0001c0002t0010g0002	1	40	0.0250	-24	c.402 others(43): Show c.402+15926_402+15949delTATATATATATATATATATATATA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	3/23		INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147062127	CAAAAAAA others(17): Show CAAAAAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG00735.hp2	a0001 a0001	a0001c0019 a0001c0019	a0001c0019t0006 a0001c0019t0006	a0001c0019t0006g0015 a0001c0019t0006g0015	1	40	0.0250	-24	c.550 others(43): Show c.550+18093_550+18116delAAAAAAAAAAAAAAAAAAAAAAAA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	4/23		INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147104873	CATATATA others(17): Show CATATATATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02886.hp2 HG02896.hp2 others(4): Show HG02451.hp2 HG02886.hp2 HG02896.hp2 HG02897.hp2 NA18522.hp1 NA19030.hp2 NA21309.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0004 a0001c0005 others(3): Show a0001c0001 a0001c0004 a0001c0005 a0001c0010 a0001c0013 a0002c0016	a0001c0001t0002 a0001c0004t0003 a0001c0005t0022 others(3): Show a0001c0001t0002 a0001c0004t0003 a0001c0005t0022 a0001c0010t0002 a0001c0013t0003 a0002c0016t0004	a0001c0001t0002g0006 a0001c0004t0003g0035 a0001c0004t0003g0036 others(4): Show a0001c0001t0002g0006 a0001c0004t0003g0035 a0001c0004t0003g0036 a0001c0005t0022g0032 a0001c0010t0002g0014 a0001c0013t0003g0039 a0002c0016t0004g0024	7	40	0.1750	-24	c.551 others(41): Show c.551-3253_551-3230delATATATATATATATATATATATAT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	4/23		INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147347433	TATATATG others(17): Show TATATATGCATATATATATATATGC	T T	intron_variant intron_variant	MODIFIER	HG03139.hp1 HG03139.hp1	a0001 a0001	a0001c0008 a0001c0008	a0001c0008t0001 a0001c0008t0001	a0001c0008t0001g0025 a0001c0008t0001g0025	1	40	0.0250	-24	c.149 others(45): Show c.1498+47150_1498+47173delGCATATATATATATATGCATATAT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	9/23		INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	147557030	GGGAGGCT others(17): Show GGGAGGCTGAGGCAGGCGGGGGTCA	G G	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG02717.hp1	a0002 a0002	a0002c0017 a0002c0017	a0002c0017t0015 a0002c0017t0015	a0002c0017t0015g0037 a0002c0017t0015g0037	1	40	0.0250	-24	c.177 others(43): Show c.1778-5104_1778-5081delGGCTGAGGCAGGCGGGGGTCAGGA	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	11/23		INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	148061954	TATAGATA others(17): Show TATAGATAGATAGATAGATAGATAG	T T	intron_variant intron_variant	MODIFIER	HG03139.hp2 HG03139.hp2	a0001 a0001	a0001c0011 a0001c0011	a0001c0011t0016 a0001c0011t0016	a0001c0011t0016g0019 a0001c0011t0016g0019	1	40	0.0250	-24	c.238 others(45): Show c.2384-56133_2384-56110delAGATAGATAGATAGATAGATAGAT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	15/23		INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	148283288	AAAGAAAG others(17): Show AAAGAAAGAAAGAAAGAAAGGAAGG	A A	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02630.hp1 HG02451.hp1 HG02630.hp1	a0001 a0001	a0001c0002 a0001c0012 a0001c0002 a0001c0012	a0001c0002t0001 a0001c0012t0004 a0001c0002t0001 a0001c0012t0004	a0001c0002t0001g0007 a0001c0012t0004g0026 a0001c0002t0001g0007 a0001c0012t0004g0026	2	40	0.0500	-24	c.347 others(45): Show c.3475+16166_3475+16189delAAAGAAAGAAAGAAAGGAAGGAAG	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	21/23		INFO_REALIGN_3_PRIME	chr7	TogoVar
CNTNAP2_chr7_146111801_148425998	148413424	ATATATAT others(17): Show ATATATATATATATATATATATATT	A A	intron_variant intron_variant	MODIFIER	HG02922.hp1 HG03540.hp1 HG02922.hp1 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0012 a0001c0002t0010 a0001c0001t0012 a0001c0002t0010	a0001c0001t0012g0034 a0001c0002t0010g0002 a0001c0001t0012g0034 a0001c0002t0010g0002	2	40	0.0500	-24	c.379 others(43): Show c.3797-1992_3797-1969delTATATATATATATATATATATATT	CNTNAP2	ENSG00000174469.23	transcript	ENST00000361727.8	protein_coding	23/23			chr7	TogoVar

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