Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
LIPG_chr18_49557057_49604185	49567979	TGAAGCAT others(18): Show TGAAGCATGGCTGTGCTGAGGGTGGG	T T	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG01074.hp2 HG01167.hp2 others(1): Show HG00642.hp1 HG01074.hp2 HG01167.hp2 HG01981.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0015 a0001c0001t0015	a0001c0001t0015g0001 a0001c0001t0015g0027 a0001c0001t0015g0028 a0001c0001t0015g0001 a0001c0001t0015g0027 a0001c0001t0015g0028	4	384	0.0104	-25	c.459 others(40): Show c.459+361_459+385delAGCATGGCTGTGCTGAGGGTGGGGA	LIPG	ENSG00000101670.12	transcript	ENST00000261292.9	protein_coding	3/9		INFO_REALIGN_3_PRIME	chr18	TogoVar
LIPG_chr18_49557057_49604185	49579759	CTTTCCTT others(18): Show CTTTCCTTTCTTTTCTTTTCTTTTCT	C C	intron_variant intron_variant	MODIFIER	NA19030.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0049 a0001c0001t0049	a0001c0001t0049g0292 a0001c0001t0049g0292	1	384	0.0026	-25	c.794 others(42): Show c.794-1651_794-1627delCTTTCTTTTCTTTTCTTTTCTTTTC	LIPG	ENSG00000101670.12	transcript	ENST00000261292.9	protein_coding	5/9		INFO_REALIGN_3_PRIME	chr18	TogoVar
LIPG_chr18_49557057_49604185	49579764	CTTTCTTT others(18): Show CTTTCTTTTCTTTTCTTTTCTTTTCT	C C	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00280.hp2 HG00423.hp2 others(44): Show HG00140.hp1 HG00280.hp2 HG00423.hp2 HG00642.hp2 HG01070.hp2 HG01071.hp1 HG01099.hp1 HG01106.hp2 HG01123.hp2 HG01167.hp1 HG01175.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01346.hp2 HG01993.hp1 HG02056.hp2 HG02109.hp2 HG02257.hp1 HG02280.hp2 HG02602.hp2 HG02615.hp1 HG02723.hp2 HG02886.hp1 HG03139.hp2 HG03225.hp1 HG03239.hp1 HG03491.hp1 HG03669.hp2 HG03927.hp1 HG04115.hp2 HG04184.hp1 HG04204.hp1 HG04228.hp2 NA18612.hp1 NA18947.hp1 NA18998.hp1 NA19010.hp1 NA19064.hp1 NA19080.hp1 NA19083.hp2 NA19084.hp1 NA20752.hp1 NA21309.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0002c0012 others(1): Show a0001c0001 a0002c0002 a0002c0012 a0003c0004	a0001c0001t0001 a0001c0001t0102 a0001c0001t0106 others(16): Show a0001c0001t0001 a0001c0001t0102 a0001c0001t0106 a0002c0002t0005 a0002c0002t0009 a0002c0002t0014 a0002c0002t0021 a0002c0002t0028 a0002c0002t0031 a0002c0002t0051 a0002c0002t0054 a0002c0002t0058 a0002c0002t0059 a0002c0002t0060 a0002c0002t0071 a0002c0002t0072 a0002c0002t0074 a0002c0012t0057 a0003c0004t0026	a0001c0001t0001g0092 a0001c0001t0102g0143 a0001c0001t0106g0144 others(43): Show a0001c0001t0001g0092 a0001c0001t0102g0143 a0001c0001t0106g0144 a0002c0002t0005g0003 a0002c0002t0005g0339 a0002c0002t0005g0340 a0002c0002t0005g0341 a0002c0002t0005g0346 a0002c0002t0005g0348 a0002c0002t0005g0349 a0002c0002t0005g0353 a0002c0002t0005g0364 a0002c0002t0005g0365 a0002c0002t0005g0366 a0002c0002t0005g0367 a0002c0002t0009g0291 a0002c0002t0009g0347 a0002c0002t0009g0351 a0002c0002t0009g0356 a0002c0002t0009g0357 a0002c0002t0009g0358 a0002c0002t0009g0360 a0002c0002t0009g0361 a0002c0002t0014g0332 a0002c0002t0014g0333 a0002c0002t0014g0334 a0002c0002t0014g0335 a0002c0002t0014g0336 a0002c0002t0014g0337 a0002c0002t0021g0376 a0002c0002t0021g0377 a0002c0002t0021g0378 a0002c0002t0028g0343 a0002c0002t0028g0354 a0002c0002t0031g0324 a0002c0002t0031g0325 a0002c0002t0051g0342 a0002c0002t0054g0344 a0002c0002t0058g0308 a0002c0002t0059g0352 a0002c0002t0060g0359 a0002c0002t0071g0362 a0002c0002t0072g0363 a0002c0002t0074g0373 a0002c0012t0057g0368 a0003c0004t0026g0168	47	384	0.1224	-25	c.794 others(42): Show c.794-1618_794-1594delTCTTTTCTTTTCTTTTCTTTTCTTT	LIPG	ENSG00000101670.12	transcript	ENST00000261292.9	protein_coding	5/9		INFO_REALIGN_3_PRIME	chr18	TogoVar
LIPI_chr21_14103813_14215955	14106195	AAAAAAAA others(18): Show AAAAAAAAAAATATATATATATATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00738.hp2 HG00738.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0110 a0001c0001t0001g0110	1	362	0.0028	-25	c.27 others(36): Show c.2773_*2797delATATATATATATATATTTTTTTTTT	LIPI	ENSG00000188992.12	transcript	ENST00000681601.1	protein_coding		2617		chr21	TogoVar
LIPI_chr21_14103813_14215955	14106197	AAAAAAAA others(18): Show AAAAAAAAATATATATATATATATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18747.hp1 NA18980.hp2 NA19090.hp1 NA18747.hp1 NA18980.hp2 NA19090.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0138 a0001c0001t0001g0150 a0001c0001t0001g0155 a0001c0001t0001g0138 a0001c0001t0001g0150 a0001c0001t0001g0155	3	362	0.0083	-25	c.27 others(36): Show c.2771_*2795delATATATATATATATATATTTTTTTT	LIPI	ENSG00000188992.12	transcript	ENST00000681601.1	protein_coding		2615		chr21	TogoVar
LIPI_chr21_14103813_14215955	14106199	AAAAAAAT others(18): Show AAAAAAATATATATATATATATATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01081.hp2 HG02080.hp2 NA18959.hp1 others(5): Show HG01081.hp2 HG02080.hp2 NA18959.hp1 NA18991.hp2 NA18994.hp1 NA19004.hp1 NA19060.hp2 homoSapiens_chm13v2.hp1	a0001 a0006 a0001 a0006	a0001c0001 a0006c0012 a0001c0001 a0006c0012	a0001c0001t0001 a0006c0012t0001 a0001c0001t0001 a0006c0012t0001	a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0163 others(4): Show a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0175 a0006c0012t0001g0281 a0006c0012t0001g0287	8	362	0.0221	-25	c.27 others(36): Show c.2769_*2793delATATATATATATATATATATTTTTT	LIPI	ENSG00000188992.12	transcript	ENST00000681601.1	protein_coding		2613		chr21	TogoVar
LIPM_chr10_88797730_88825546	88808910	CATTTTAT others(18): Show CATTTTATTTTATTTTATTTTATTTT	C C	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG02257.hp2 HG02280.hp1 others(2): Show HG01081.hp2 HG02257.hp2 HG02280.hp1 HG02630.hp2 HG03453.hp1	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0001 a0001c0007t0001	a0001c0007t0001g0058 a0001c0007t0001g0077 a0001c0007t0001g0083 others(1): Show a0001c0007t0001g0058 a0001c0007t0001g0077 a0001c0007t0001g0083 a0001c0007t0001g0117	5	462	0.0108	-25	c.265 others(40): Show c.265+531_265+555delATTTTATTTTATTTTATTTTATTTT	LIPM	ENSG00000173239.14	transcript	ENST00000404743.9	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr10	TogoVar
LITAF_chr16_11542722_11591919	11579459	AAAAATAA others(18): Show AAAAATAAAATAAAATAAAATAAAAT	A A	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00408.hp1 HG00438.hp2 others(32): Show HG00099.hp1 HG00408.hp1 HG00438.hp2 HG00597.hp1 HG00733.hp1 HG00741.hp1 HG01106.hp1 HG01243.hp2 HG01515.hp1 HG01943.hp2 HG02015.hp1 HG02165.hp1 HG02683.hp1 HG02738.hp1 HG03491.hp1 HG03492.hp1 HG03704.hp1 HG03710.hp2 HG04184.hp2 HG04228.hp2 NA18943.hp1 NA18961.hp1 NA18973.hp2 NA18986.hp1 NA18993.hp2 NA19007.hp1 NA19010.hp2 NA19011.hp1 NA19012.hp2 NA19064.hp2 NA19070.hp1 NA19074.hp2 NA19081.hp2 NA20805.hp2 NA20905.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 a0001c0001t0009 a0001c0001t0013 a0001c0001t0017 a0001c0001t0023 a0001c0001t0027 a0001c0001t0034 a0002c0002t0002	a0001c0001t0001g0015 a0001c0001t0001g0160 a0001c0001t0001g0343 others(32): Show a0001c0001t0001g0015 a0001c0001t0001g0160 a0001c0001t0001g0343 a0001c0001t0001g0345 a0001c0001t0001g0348 a0001c0001t0001g0349 a0001c0001t0001g0352 a0001c0001t0001g0356 a0001c0001t0001g0362 a0001c0001t0001g0364 a0001c0001t0001g0366 a0001c0001t0001g0367 a0001c0001t0002g0016 a0001c0001t0002g0023 a0001c0001t0002g0338 a0001c0001t0002g0357 a0001c0001t0002g0358 a0001c0001t0002g0360 a0001c0001t0002g0363 a0001c0001t0002g0368 a0001c0001t0002g0386 a0001c0001t0003g0159 a0001c0001t0003g0336 a0001c0001t0003g0351 a0001c0001t0003g0353 a0001c0001t0003g0365 a0001c0001t0003g0387 a0001c0001t0006g0359 a0001c0001t0009g0350 a0001c0001t0013g0346 a0001c0001t0017g0354 a0001c0001t0023g0347 a0001c0001t0027g0161 a0001c0001t0034g0361 a0002c0002t0002g0355	35	412	0.0850	-25	c.-6+ others(40): Show c.-6+7402_-6+7426delATTTTATTTTATTTTATTTTATTTT	LITAF	ENSG00000189067.14	transcript	ENST00000622633.5	protein_coding	1/3			chr16	TogoVar
LKAAEAR1_chr20_64078376_64089398	64086909	GGGTGGGA others(18): Show GGGTGGGAGTGGGGAGGACAAAAGAC	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA20905.hp2 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	102	0.0098	-25	c.-27 others(36): Show c.-2715_-2691delGTCTTTTGTCCTCCCCACTCCCACC	LKAAEAR1	ENSG00000171695.11	transcript	ENST00000302096.5	protein_coding		2512		chr20	TogoVar
LMAN1_chr18_59322823_59364265	59347320	CAAAAAAA others(18): Show CAAAAAAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG03139.hp1 HG03540.hp2 HG03139.hp1 HG03540.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0127 a0001c0001t0001g0128	2	386	0.0052	-25	c.822 others(40): Show c.822+168_822+192delTTTTTTTTTTTTTTTTTTTTTTTTT	LMAN1	ENSG00000074695.6	transcript	ENST00000251047.6	protein_coding	7/12			chr18	TogoVar
LMF1_chr16_848634_975984	858733	GGTGTCTC others(18): Show GGTGTCTCGGGACGGGTGTGACTGGT	G G	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02572.hp2	a0006 a0006	a0006c0049 a0006c0049	a0006c0049t0001 a0006c0049t0001	a0006c0049t0001g0243 a0006c0049t0001g0243	1	294	0.0034	-25	c.153 others(44): Show c.1530-4052_1530-4028delACCAGTCACACCCGTCCCGAGACAC	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	10/10			chr16	TogoVar
LMF1_chr16_848634_975984	858737	TCTCGGGA others(18): Show TCTCGGGACGGGTGTGACTGGTGTCA	T T	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02109.hp1 HG02486.hp1 others(1): Show HG01884.hp1 HG02109.hp1 HG02486.hp1 HG02976.hp2	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0001 a0001c0006t0001	a0001c0006t0001g0082 a0001c0006t0001g0285 a0001c0006t0001g0286 others(1): Show a0001c0006t0001g0082 a0001c0006t0001g0285 a0001c0006t0001g0286 a0001c0006t0001g0287	4	294	0.0136	-25	c.153 others(44): Show c.1530-4056_1530-4032delTGACACCAGTCACACCCGTCCCGAG	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	10/10			chr16	TogoVar
LMF1_chr16_848634_975984	858987	GCAGTGGT others(18): Show GCAGTGGTGTCACGGGACGCGTGTGC	G G	intron_variant intron_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0010 a0010	a0010c0047 a0010c0047	a0010c0047t0010 a0010c0047t0010	a0010c0047t0010g0281 a0010c0047t0010g0281	1	294	0.0034	-25	c.153 others(44): Show c.1530-4306_1530-4282delGCACACGCGTCCCGTGACACCACTG	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	10/10			chr16	TogoVar
LMF1_chr16_848634_975984	859552	GCAGTGAT others(18): Show GCAGTGATGTCACGGGACGGGTGTGC	G G	intron_variant intron_variant	MODIFIER	HG03453.hp1 HG03453.hp1	a0001 a0001	a0001c0026 a0001c0026	a0001c0026t0001 a0001c0026t0001	a0001c0026t0001g0234 a0001c0026t0001g0234	1	294	0.0034	-25	c.153 others(44): Show c.1530-4871_1530-4847delGCACACCCGTCCCGTGACATCACTG	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	10/10			chr16	TogoVar
LMF2_chr22_50497949_50512702	50510598	TTGTATTT others(18): Show TTGTATTTTTAGTAGAGATGGGTTTC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18944.hp1 NA18944.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0006 a0001c0001t0001g0006	1	414	0.0024	-25	c.-29 others(36): Show c.-2948_-2924delGAAACCCATCTCTACTAAAAATACA	LMF2	ENSG00000100258.18	transcript	ENST00000474879.7	protein_coding		2897		chr22	TogoVar
LMO1_chr11_8219309_8268878	8262870	GGAGCCCG others(18): Show GGAGCCCGATTCTCCCCGAAGCCGCT	G G	intron_variant intron_variant	MODIFIER	HG03041.hp2 HG03041.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0046 a0001c0003t0001g0046	1	424	0.0024	-25	c.25+ others(38): Show c.25+443_25+467delAGCGGCTTCGGGGAGAATCGGGCTC	LMO1	ENSG00000166407.14	transcript	ENST00000335790.8	protein_coding	1/3			chr11	TogoVar
LMOD3_chr3_69101065_69127595	69107453	GTTTTTTT others(18): Show GTTTTTTTTTTTTTTTTTTTTTTTTT	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA18906.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0083 a0001c0001t0083	a0001c0001t0083g0311 a0001c0001t0083g0311	1	428	0.0023	-25	c.16 others(36): Show c.1617_*1641delAAAAAAAAAAAAAAAAAAAAAAAAA	LMOD3	ENSG00000163380.16	transcript	ENST00000420581.7	protein_coding	3/3	1617		chr3	TogoVar
LMTK3_chr19_48480271_48516835	48497366	CCTGACTG others(18): Show CCTGACTGTGCCCCGCAGCCTCCTCA	C C	splice_donor_variant others(2): Show splice_donor_variant splice_region_variant intron_variant	HIGH	NA18985.hp2 NA18985.hp2	a0006 a0006	a0006c0025 a0006c0025	a0006c0025t0001 a0006c0025t0001	a0006c0025t0001g0072 a0006c0025t0001g0072	1	314	0.0032	-25	c.367 others(39): Show c.3676+2_3676+26delTGAGGAGGCTGCGGGGCACAGTCAG	LMTK3	ENSG00000142235.13	transcript	ENST00000600059.6	protein_coding	11/14			chr19	TogoVar
LOC128462377_chr16_89312046_89423292	89339455	GAGCCCAT others(18): Show GAGCCCATCCTGCCCTGAGTGCACGC	G G	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00423.hp2 HG00609.hp2 others(32): Show HG00323.hp1 HG00423.hp2 HG00609.hp2 HG00621.hp2 HG00642.hp1 HG01243.hp2 HG01346.hp2 HG02040.hp1 HG02148.hp2 HG02165.hp1 HG02300.hp2 HG02523.hp1 HG02647.hp2 HG03490.hp2 HG03492.hp2 HG03704.hp2 HG03927.hp1 NA18942.hp2 NA18945.hp1 NA18952.hp1 NA18959.hp1 NA18966.hp2 NA18977.hp1 NA18978.hp2 NA18982.hp2 NA18986.hp2 NA18995.hp1 NA18998.hp2 NA19005.hp1 NA19062.hp2 NA19067.hp1 NA19077.hp2 NA19079.hp1 NA19086.hp1 NA19087.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0000 a0001c0001t0000	a0001c0001t0000g0010 a0001c0001t0000g0027 a0001c0001t0000g0036 others(32): Show a0001c0001t0000g0010 a0001c0001t0000g0027 a0001c0001t0000g0036 a0001c0001t0000g0037 a0001c0001t0000g0039 a0001c0001t0000g0047 a0001c0001t0000g0050 a0001c0001t0000g0065 a0001c0001t0000g0084 a0001c0001t0000g0100 a0001c0001t0000g0101 a0001c0001t0000g0103 a0001c0001t0000g0121 a0001c0001t0000g0122 a0001c0001t0000g0123 a0001c0001t0000g0124 a0001c0001t0000g0125 a0001c0001t0000g0133 a0001c0001t0000g0134 a0001c0001t0000g0135 a0001c0001t0000g0145 a0001c0001t0000g0146 a0001c0001t0000g0147 a0001c0001t0000g0148 a0001c0001t0000g0155 a0001c0001t0000g0166 a0001c0001t0000g0170 a0001c0001t0000g0177 a0001c0001t0000g0183 a0001c0001t0000g0187 a0001c0001t0000g0196 a0001c0001t0000g0228 a0001c0001t0000g0257 a0001c0001t0000g0258 a0001c0001t0000g0357	35	366	0.0956	-25	c.10- others(42): Show c.10-22405_10-22381delGCGTGCACTCAGGGCAGGATGGGCT	LOC128462377	ENSG00000288715.2	transcript	ENST00000711617.1	protein_coding	1/1			chr16	TogoVar
LOC128462377_chr16_89312046_89423292	89394686	GTCTCAAT others(18): Show GTCTCAATAAAACCTGCGAAGACTGC	G G	intron_variant intron_variant	MODIFIER	NA19077.hp1 NA19077.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0000 a0001c0001t0000	a0001c0001t0000g0344 a0001c0001t0000g0344	1	366	0.0027	-25	c.9+2 others(40): Show c.9+23573_9+23597delGCAGTCTTCGCAGGTTTTATTGAGA	LOC128462377	ENSG00000288715.2	transcript	ENST00000711617.1	protein_coding	1/1			chr16	TogoVar
LOC128706665_chr20_10408708_10439222	10431527	AAAACCAA others(18): Show AAAACCAAACCAAACCAAACCAAACC	A A	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG03540.hp2 HG02630.hp2 HG03540.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0048 a0001c0001t0001g0067 a0001c0001t0001g0048 a0001c0001t0001g0067	2	408	0.0049	-25	c.-22 others(42): Show c.-22+2556_-22+2580delGGTTTGGTTTGGTTTGGTTTGGTTT	LOC128706665	ENSG00000285723.2	transcript	ENST00000649912.2	protein_coding	1/2			chr20	TogoVar
LOC128706666_chr20_10408708_10439222	10431527	AAAACCAA others(18): Show AAAACCAAACCAAACCAAACCAAACC	A A	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG03540.hp2 HG02630.hp2 HG03540.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0048 a0001c0001t0001g0067 a0001c0001t0001g0048 a0001c0001t0001g0067	2	408	0.0049	-25	c.-27 others(44): Show c.-276+2556_-276+2580delGGTTTGGTTTGGTTTGGTTTGGTTT	LOC128706666	ENSG00000285508.2	transcript	ENST00000713549.1	protein_coding	1/2			chr20	TogoVar
LOC400499_chr16_11367015_11532247	11382549	CATTTGGT others(18): Show CATTTGGTCACAGAAGTCATCTGCTG	C C	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG03098.hp2 HG03453.hp2 others(1): Show HG02145.hp2 HG03098.hp2 HG03453.hp2 HG06807.hp1	a0149 a0154 a0159 others(1): Show a0149 a0154 a0159 a0205	a0149c0167 a0154c0269 a0159c0230 others(1): Show a0149c0167 a0154c0269 a0159c0230 a0205c0189	a0149c0167t0010 a0154c0269t0010 a0159c0230t0012 others(1): Show a0149c0167t0010 a0154c0269t0010 a0159c0230t0012 a0205c0189t0010	a0149c0167t0010g0041 a0154c0269t0010g0290 a0159c0230t0012g0224 others(1): Show a0149c0167t0010g0041 a0154c0269t0010g0290 a0159c0230t0012g0224 a0205c0189t0010g0046	4	310	0.0129	-25	c.995 others(44): Show c.9958+1068_9958+1092delCAGCAGATGACTTCTGTGACCAAAT	LOC400499	ENSG00000188897.10	transcript	ENST00000696174.1	protein_coding	66/66			chr16	TogoVar
LOC400499_chr16_11367015_11532247	11515869	CAGCCCAG others(18): Show CAGCCCAGCCCAGCCCAGCCCAGCCT	C C	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG02970.hp2 HG00741.hp1 HG02970.hp2	a0072 a0078 a0072 a0078	a0072c0063 a0078c0083 a0072c0063 a0078c0083	a0072c0063t0002 a0078c0083t0002 a0072c0063t0002 a0078c0083t0002	a0072c0063t0002g0074 a0078c0083t0002g0020 a0072c0063t0002g0074 a0078c0083t0002g0020	2	310	0.0065	-25	c.654 others(38): Show c.654+35_654+59delAGGCTGGGCTGGGCTGGGCTGGGCT	LOC400499	ENSG00000188897.10	transcript	ENST00000696174.1	protein_coding	6/66			chr16	TogoVar
LOXHD1_chr18_46472273_46662220	46607443	CACATATA others(18): Show CACATATATATGGGTGATAATATGAT	C C	intron_variant intron_variant	MODIFIER	HG04228.hp2 HG04228.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0222 a0003c0003t0001g0222	1	270	0.0037	-25	c.760 others(42): Show c.760-3239_760-3215delATCATATTATCACCCATATATATGT	LOXHD1	ENSG00000167210.17	transcript	ENST00000642948.1	protein_coding	6/40			chr18	TogoVar
LOXL2_chr8_23291897_23409120	23386673	CAAGGGTG others(18): Show CAAGGGTGTCTCAACATTGACAGTCT	C C	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp2 HG00423.hp2 others(52): Show HG00099.hp2 HG00140.hp2 HG00423.hp2 HG00558.hp1 HG00609.hp1 HG00673.hp2 HG01070.hp1 HG01106.hp1 HG01109.hp2 HG01243.hp1 HG01255.hp1 HG01496.hp1 HG01496.hp2 HG01884.hp1 HG02004.hp2 HG02015.hp2 HG02027.hp2 HG02071.hp2 HG02083.hp1 HG02129.hp2 HG02145.hp1 HG02148.hp1 HG02451.hp2 HG02615.hp2 HG02735.hp1 HG03239.hp2 HG03669.hp2 HG06807.hp2 NA18747.hp1 NA18939.hp1 NA18939.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18944.hp1 NA18947.hp1 NA18950.hp1 NA18954.hp1 NA18960.hp2 NA18961.hp1 NA18969.hp2 NA18979.hp1 NA18990.hp2 NA18993.hp2 NA19054.hp2 NA19056.hp2 NA19060.hp1 NA19063.hp1 NA19064.hp2 NA19065.hp1 NA19072.hp2 NA19079.hp2 NA19081.hp1 NA19086.hp2 NA19091.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0002 a0001c0003 others(14): Show a0001c0001 a0001c0002 a0001c0003 a0001c0008 a0001c0011 a0001c0017 a0001c0018 a0001c0020 a0001c0028 a0001c0053 a0001c0056 a0002c0004 a0002c0009 a0002c0014 a0002c0022 a0002c0051 a0003c0048	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(26): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0002t0002 a0001c0002t0003 a0001c0002t0004 a0001c0003t0001 a0001c0003t0002 a0001c0003t0003 a0001c0008t0005 a0001c0011t0005 a0001c0017t0002 a0001c0017t0004 a0001c0018t0001 a0001c0020t0001 a0001c0028t0001 a0001c0028t0002 a0001c0053t0004 a0001c0056t0001 a0002c0004t0004 a0002c0009t0002 a0002c0014t0004 a0002c0014t0005 a0002c0022t0001 a0002c0022t0003 a0002c0051t0003 a0003c0048t0001	a0001c0001t0001g0090 a0001c0001t0001g0094 a0001c0001t0001g0099 others(52): Show a0001c0001t0001g0090 a0001c0001t0001g0094 a0001c0001t0001g0099 a0001c0001t0001g0104 a0001c0001t0001g0112 a0001c0001t0001g0115 a0001c0001t0001g0118 a0001c0001t0001g0130 a0001c0001t0002g0101 a0001c0001t0002g0120 a0001c0001t0002g0145 a0001c0001t0002g0146 a0001c0001t0002g0148 a0001c0001t0003g0124 a0001c0001t0003g0132 a0001c0001t0004g0129 a0001c0001t0005g0092 a0001c0001t0005g0102 a0001c0001t0005g0103 a0001c0002t0002g0114 a0001c0002t0002g0151 a0001c0002t0003g0093 a0001c0002t0003g0168 a0001c0002t0004g0096 a0001c0003t0001g0087 a0001c0003t0001g0110 a0001c0003t0001g0252 a0001c0003t0002g0105 a0001c0003t0002g0107 a0001c0003t0002g0116 a0001c0003t0003g0108 a0001c0008t0005g0111 a0001c0011t0005g0119 a0001c0017t0002g0097 a0001c0017t0004g0131 a0001c0018t0001g0109 a0001c0020t0001g0125 a0001c0020t0001g0126 a0001c0020t0001g0127 a0001c0028t0001g0142 a0001c0028t0002g0141 a0001c0053t0004g0100 a0001c0056t0001g0091 a0002c0004t0004g0122 a0002c0009t0002g0095 a0002c0009t0002g0098 a0002c0009t0002g0123 a0002c0009t0002g0128 a0002c0009t0002g0144 a0002c0014t0004g0121 a0002c0014t0005g0117 a0002c0022t0001g0106 a0002c0022t0003g0149 a0002c0051t0003g0113 a0003c0048t0001g0143	55	348	0.1581	-25	c.-84 others(44): Show c.-84+17256_-84+17280delAGACTGTCAATGTTGAGACACCCTT	LOXL2	ENSG00000134013.16	transcript	ENST00000389131.8	protein_coding	1/13			chr8	TogoVar
LPAR4_chrX_78742720_78763714	78761643	ACACTTGG others(18): Show ACACTTGGACACAGGAAGGGGAATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03516.hp2 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0035 a0001c0001t0035	a0001c0001t0035g0025 a0001c0001t0035g0025	1	324	0.0031	-25	c.56 others(36): Show c.5662_*5686delCACTTGGACACAGGAAGGGGAATAT	LPAR4	ENSG00000147145.14	transcript	ENST00000614823.5	protein_coding		2930		chrX	TogoVar
LPA_chr6_160526482_160669275	160654035	TTATATAT others(18): Show TTATATATAATATATAATATATTATA	T T	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00639.hp1 HG00642.hp2 others(13): Show HG00323.hp1 HG00639.hp1 HG00642.hp2 HG00733.hp1 HG00738.hp2 HG00741.hp2 HG01261.hp2 HG01361.hp1 HG02257.hp1 HG02486.hp1 HG02602.hp2 HG02698.hp1 HG02970.hp2 HG03492.hp1 NA20129.hp2 NA20905.hp1	a0001 a0003 a0004 others(1): Show a0001 a0003 a0004 a0021	a0001c0001 a0003c0003 a0003c0032 others(2): Show a0001c0001 a0003c0003 a0003c0032 a0004c0004 a0021c0036	a0001c0001t0001 a0003c0003t0001 a0003c0032t0001 others(2): Show a0001c0001t0001 a0003c0003t0001 a0003c0032t0001 a0004c0004t0001 a0021c0036t0001	a0001c0001t0001g0048 a0001c0001t0001g0050 a0001c0001t0001g0051 others(13): Show a0001c0001t0001g0048 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0063 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0068 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0003c0003t0001g0058 a0003c0032t0001g0069 a0004c0004t0001g0067 a0021c0036t0001g0112	16	148	0.1081	-25	c.50- others(40): Show c.50-3563_50-3539delTATAATATATTATATATTATATATA	LPA	ENSG00000198670.13	transcript	ENST00000316300.10	protein_coding	1/38			chr6	TogoVar
LPP_chr3_188149157_188895671	188250920	CTCCCTTC others(18): Show CTCCCTTCCCTTCCCTTCCCTTCCCT	C C	intron_variant intron_variant	MODIFIER	HG03195.hp1 HG03195.hp1	a0002 a0002	a0002c0015 a0002c0015	a0002c0015t0037 a0002c0015t0037	a0002c0015t0037g0051 a0002c0015t0037g0051	1	76	0.0132	-25	c.-67 others(44): Show c.-67+25429_-67+25453delTCCCTTCCCTTCCCTTCCCTTCCCT	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	2/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188371268	TATTTATA others(18): Show TATTTATATATGAATTATCTACATTC	T T	intron_variant intron_variant	MODIFIER	HG03195.hp1 NA19043.hp1 HG03195.hp1 NA19043.hp1	a0002 a0004 a0002 a0004	a0002c0015 a0004c0017 a0002c0015 a0004c0017	a0002c0015t0037 a0004c0017t0044 a0002c0015t0037 a0004c0017t0044	a0002c0015t0037g0051 a0004c0017t0044g0043 a0002c0015t0037g0051 a0004c0017t0044g0043	2	76	0.0263	-25	c.-10 others(44): Show c.-10+29567_-10+29591delCTACATTCATTTATATATGAATTAT	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	3/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188607391	ATATATAT others(18): Show ATATATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG03540.hp1 HG02896.hp2 HG03540.hp1	a0002 a0002	a0002c0003 a0002c0004 a0002c0003 a0002c0004	a0002c0003t0028 a0002c0004t0045 a0002c0003t0028 a0002c0004t0045	a0002c0003t0028g0061 a0002c0004t0045g0026 a0002c0003t0028g0061 a0002c0004t0045g0026	2	76	0.0263	-25	c.430 others(42): Show c.430-1769_430-1745delTATATATATATATATATATATATAT	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	6/11			chr3	TogoVar
LPP_chr3_188149157_188895671	188755809	CAAAAAAA others(18): Show CAAAAAAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01074.hp2 HG01978.hp1 HG02896.hp1 others(4): Show HG01074.hp2 HG01978.hp1 HG02896.hp1 HG03017.hp1 HG03239.hp2 HG03704.hp1 NA20752.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0006 a0002c0007 a0001c0001 a0001c0006 a0002c0007	a0001c0001t0005 a0001c0001t0017 a0001c0001t0025 others(4): Show a0001c0001t0005 a0001c0001t0017 a0001c0001t0025 a0001c0006t0034 a0001c0006t0041 a0001c0006t0064 a0002c0007t0021	a0001c0001t0005g0024 a0001c0001t0017g0064 a0001c0001t0025g0068 others(4): Show a0001c0001t0005g0024 a0001c0001t0017g0064 a0001c0001t0025g0068 a0001c0006t0034g0039 a0001c0006t0041g0002 a0001c0006t0064g0007 a0002c0007t0021g0063	7	76	0.0921	-25	c.124 others(44): Show c.1241-4272_1241-4248delAAAAAAAAAAAAAAAAAAAAAAAAA	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	8/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188843654	GGGGGCGC others(18): Show GGGGGCGCCTGTAGTCCCAGCTACTC	G G	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02630.hp2 NA19043.hp1 HG02622.hp2 HG02630.hp2 NA19043.hp1	a0001 a0003 a0004 a0001 a0003 a0004	a0001c0001 a0003c0009 a0004c0017 a0001c0001 a0003c0009 a0004c0017	a0001c0001t0008 a0003c0009t0015 a0004c0017t0044 a0001c0001t0008 a0003c0009t0015 a0004c0017t0044	a0001c0001t0008g0065 a0003c0009t0015g0066 a0004c0017t0044g0043 a0001c0001t0008g0065 a0003c0009t0015g0066 a0004c0017t0044g0043	3	76	0.0395	-25	c.141 others(46): Show c.1411-22542_1411-22518delGCGCCTGTAGTCCCAGCTACTCGG G	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	9/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LRBA_chr4_150259435_151020284	150650857	GAATCATT others(18): Show GAATCATTAGAACTTGGGGAGAGAAC	G G	intron_variant intron_variant	MODIFIER	HG01515.hp1 HG01515.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0012 a0001c0001t0002g0012	1	180	0.0056	-25	c.592 others(46): Show c.5921+32669_5921+32693delGTTCTCTCCCCAAGTTCTAATGAT T	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	37/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150805580	GGAAAGGA others(18): Show GGAAAGGAAAGGAAAGGAAAGGAAAA	G G	intron_variant intron_variant	MODIFIER	HG03209.hp1 NA20129.hp1 HG03209.hp1 NA20129.hp1	a0001 a0023 a0001 a0023	a0001c0037 a0023c0041 a0001c0037 a0023c0041	a0001c0037t0003 a0023c0041t0003 a0001c0037t0003 a0023c0041t0003	a0001c0037t0003g0175 a0023c0041t0003g0173 a0001c0037t0003g0175 a0023c0041t0003g0173	2	180	0.0111	-25	c.551 others(42): Show c.5518+666_5518+690delTTTTCCTTTCCTTTCCTTTCCTTTC	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	33/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150809850	AATACGAT others(18): Show AATACGATACGATACGATACGATACG	A A	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG00738.hp1 HG01167.hp1 others(5): Show HG00735.hp2 HG00738.hp1 HG01167.hp1 HG02071.hp1 HG02723.hp2 HG02886.hp2 NA19060.hp2 NA19091.hp1	a0001 a0003 a0016 a0001 a0003 a0016	a0001c0001 a0003c0004 a0016c0028 a0001c0001 a0003c0004 a0016c0028	a0001c0001t0001 a0001c0001t0004 a0003c0004t0009 others(1): Show a0001c0001t0001 a0001c0001t0004 a0003c0004t0009 a0016c0028t0003	a0001c0001t0001g0015 a0001c0001t0001g0055 a0001c0001t0001g0082 others(5): Show a0001c0001t0001g0015 a0001c0001t0001g0055 a0001c0001t0001g0082 a0001c0001t0001g0085 a0001c0001t0001g0088 a0001c0001t0004g0065 a0003c0004t0009g0157 a0016c0028t0003g0118	8	180	0.0444	-25	c.530 others(44): Show c.5306-1477_5306-1453delCGTATCGTATCGTATCGTATCGTAT	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	31/56			chr4	TogoVar
LRCH2_chrX_115105616_115239096	115221193	AAAAAAAA others(18): Show AAAAAAAAAAAAAAAAAAATATATAT	A A	intron_variant intron_variant	MODIFIER	HG04115.hp1 NA18953.hp1 NA19009.hp1 others(1): Show HG04115.hp1 NA18953.hp1 NA19009.hp1 NA19070.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0052 others(1): Show a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0210	4	238	0.0168	-25	c.349 others(44): Show c.349+12475_349+12499delATATATATTTTTTTTTTTTTTTTTT	LRCH2	ENSG00000130224.15	transcript	ENST00000317135.13	protein_coding	1/20			chrX	TogoVar
LRCH2_chrX_115105616_115239096	115221195	AAAAAAAA others(18): Show AAAAAAAAAAAAAAAAATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG01081.hp1 HG01081.hp2 others(5): Show HG00280.hp1 HG01081.hp1 HG01081.hp2 HG01255.hp1 HG01515.hp1 HG01943.hp1 HG02083.hp1 HG02738.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 others(5): Show a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0142 a0001c0001t0001g0153 a0001c0001t0001g0222	8	238	0.0336	-25	c.349 others(44): Show c.349+12473_349+12497delATATATATATTTTTTTTTTTTTTTT	LRCH2	ENSG00000130224.15	transcript	ENST00000317135.13	protein_coding	1/20			chrX	TogoVar
LRCH2_chrX_115105616_115239096	115221197	AAAAAAAA others(18): Show AAAAAAAAAAAAAAATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01952.hp1 HG01952.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0154 a0001c0001t0001g0154	1	238	0.0042	-25	c.349 others(44): Show c.349+12471_349+12495delATATATATATATTTTTTTTTTTTTT	LRCH2	ENSG00000130224.15	transcript	ENST00000317135.13	protein_coding	1/20			chrX	TogoVar
LRFN5_chr14_41601876_41909549	41826848	TAATAAGT others(18): Show TAATAAGTAATTATTTTGATTCACAA	T T	intron_variant intron_variant	MODIFIER	HG02818.hp2 HG03225.hp2 HG03579.hp2 HG02818.hp2 HG03225.hp2 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0006 a0001c0001 a0001c0006	a0001c0001t0004 a0001c0006t0001 a0001c0001t0004 a0001c0006t0001	a0001c0001t0004g0035 a0001c0001t0004g0036 a0001c0006t0001g0111 a0001c0001t0004g0035 a0001c0001t0004g0036 a0001c0006t0001g0111	3	280	0.0107	-25	c.-20 others(44): Show c.-20-59658_-20-59634delAAATAAGTAATTATTTTGATTCACA	LRFN5	ENSG00000165379.14	transcript	ENST00000298119.9	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr14	TogoVar
LRIT3_chr4_109843107_109877315	109850415	CTTCCTTC others(18): Show CTTCCTTCCTTTCTTTCTTTCTTTCT	C C	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG01255.hp1	a0003 a0003	a0003c0006 a0003c0006	a0003c0006t0008 a0003c0006t0008	a0003c0006t0008g0208 a0003c0006t0008g0208	1	332	0.0030	-25	c.117 others(42): Show c.117-1085_117-1061delCTTCCTTTCTTTCTTTCTTTCTTTC	LRIT3	ENSG00000183423.12	transcript	ENST00000594814.6	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr4	TogoVar
LRIT3_chr4_109843107_109877315	109876947	CCCCTCCC others(18): Show CCCCTCCCCTCCTCTCTCCTCTCCTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00738.hp2 HG02886.hp2 HG00738.hp2 HG02886.hp2	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0005 a0002c0001t0005	a0002c0001t0005g0212 a0002c0001t0005g0262 a0002c0001t0005g0212 a0002c0001t0005g0262	2	332	0.0060	-25	c.61 others(36): Show c.6159_*6183delCCCTCCCCTCCTCTCTCCTCTCCTT	LRIT3	ENSG00000183423.12	transcript	ENST00000594814.6	protein_coding		4633		chr4	TogoVar
LRP1B_chr2_140226423_142136016	140264434	GGCCAGGC others(18): Show GGCCAGGCTAGTCTTGAACTATGTTA	G G	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0003 a0003	a0003c0021 a0003c0021	a0003c0021t0001 a0003c0021t0001	a0003c0021t0001g0026 a0003c0021t0001g0026	1	28	0.0357	-25	c.132 others(46): Show c.13247+5783_13247+5807delTAACATAGTTCAAGACTAGCCTGG C	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	86/90			chr2	TogoVar
LRP1B_chr2_140226423_142136016	140318614	TGCTAGAA others(18): Show TGCTAGAATTTCCAATAACTCTGGAA	T T	intron_variant intron_variant	MODIFIER	HG03516.hp2 HG03516.hp2	a0004 a0004	a0004c0009 a0004c0009	a0004c0009t0001 a0004c0009t0001	a0004c0009t0001g0007 a0004c0009t0001g0007	1	28	0.0357	-25	c.126 others(46): Show c.12640+3324_12640+3348delTTCCAGAGTTATTGGAAATTCTAG C	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	82/90			chr2	TogoVar
LRP1B_chr2_140226423_142136016	140572199	GAAGAGAC others(18): Show GAAGAGACAATCTACAGAGAAGAAAA	G G	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02486.hp2	a0001 a0001	a0001c0024 a0001c0024	a0001c0024t0005 a0001c0024t0005	a0001c0024t0005g0009 a0001c0024t0005g0009	1	28	0.0357	-25	c.719 others(46): Show c.7194+26407_7194+26431delTTTTCTTCTCTGTAGATTGTCTCT T	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	43/90			chr2	TogoVar
LRP1B_chr2_140226423_142136016	141212249	ATTTTTTT others(18): Show ATTTTTTTTTTTTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01261.hp1 HG01261.hp1	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0003 a0001c0007t0003	a0001c0007t0003g0003 a0001c0007t0003g0003	1	28	0.0357	-25	c.850 others(44): Show c.850+16909_850+16933delAAAAAAAAAAAAAAAAAAAAAAAAA	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	6/90			chr2	TogoVar
LRP1B_chr2_140226423_142136016	141364317	GATTAAAT others(18): Show GATTAAATCACATACACAGTGGAATA	G G	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02145.hp2	a0001 a0001	a0001c0019 a0001c0019	a0001c0019t0001 a0001c0019t0001	a0001c0019t0001g0016 a0001c0019t0001g0016	1	28	0.0357	-25	c.344 others(46): Show c.344-109701_344-109677delTATTCCACTGTGTATGTGATTTAA T	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	3/90			chr2	TogoVar
LRP1B_chr2_140226423_142136016	141519380	TATATATA others(18): Show TATATATATATATATATATATATGAA	T T	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02451.hp2 HG02486.hp1 others(4): Show HG02145.hp2 HG02451.hp2 HG02486.hp1 HG02559.hp2 HG02723.hp2 HG02922.hp1 NA18522.hp2	a0001 a0001	a0001c0002 a0001c0005 a0001c0012 others(4): Show a0001c0002 a0001c0005 a0001c0012 a0001c0014 a0001c0015 a0001c0019 a0001c0028	a0001c0002t0010 a0001c0005t0008 a0001c0012t0003 others(4): Show a0001c0002t0010 a0001c0005t0008 a0001c0012t0003 a0001c0014t0004 a0001c0015t0009 a0001c0019t0001 a0001c0028t0002	a0001c0002t0010g0022 a0001c0005t0008g0010 a0001c0012t0003g0005 others(4): Show a0001c0002t0010g0022 a0001c0005t0008g0010 a0001c0012t0003g0005 a0001c0014t0004g0002 a0001c0015t0009g0017 a0001c0019t0001g0016 a0001c0028t0002g0020	7	28	0.2500	-25	c.206 others(44): Show c.206-38872_206-38848delTTCATATATATATATATATATATAT	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	2/90			chr2	TogoVar
LRP2_chr2_169122109_169367534	169181725	CAGACTGC others(18): Show CAGACTGCATTCTGAATTCTTTTCTG	C C	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00280.hp2 HG00323.hp2 others(159): Show HG00099.hp2 HG00280.hp2 HG00323.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00621.hp2 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00738.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01255.hp2 HG01257.hp1 HG01258.hp1 HG01261.hp1 HG01261.hp2 HG01361.hp1 HG01361.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01952.hp1 HG01952.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp2 HG02071.hp1 HG02080.hp2 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02451.hp2 HG02523.hp2 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02622.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02698.hp2 HG02735.hp1 HG02735.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp2 HG02897.hp1 HG02922.hp2 HG02965.hp2 HG02970.hp1 HG02976.hp2 HG03041.hp1 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03139.hp2 HG03195.hp1 HG03225.hp1 HG03453.hp1 HG03471.hp1 HG03490.hp2 HG03491.hp2 HG03516.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03669.hp1 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03942.hp1 HG03942.hp2 HG04115.hp2 HG04199.hp1 HG04204.hp1 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18941.hp1 NA18941.hp2 NA18946.hp1 NA18949.hp2 NA18950.hp2 NA18953.hp1 NA18953.hp2 NA18954.hp1 NA18956.hp2 NA18961.hp2 NA18962.hp1 NA18964.hp2 NA18966.hp1 NA18968.hp2 NA18969.hp1 NA18969.hp2 NA18971.hp1 NA18971.hp2 NA18979.hp1 NA18979.hp2 NA18982.hp2 NA18983.hp2 NA18989.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp2 NA19007.hp2 NA19009.hp2 NA19030.hp1 NA19043.hp2 NA19060.hp1 NA19060.hp2 NA19074.hp2 NA19079.hp1 NA19084.hp2 NA19086.hp1 NA19088.hp1 NA19088.hp2 NA19090.hp2 NA19091.hp2 NA19240.hp2 NA20129.hp1 NA20752.hp1 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(39): Show a0001 a0002 a0003 a0005 a0008 a0009 a0011 a0012 a0013 a0014 a0015 a0016 a0019 a0021 a0022 a0023 a0024 a0026 a0028 a0029 a0030 a0031 a0032 a0033 a0034 a0035 a0037 a0038 a0040 a0044 a0046 a0052 a0054 a0055 a0056 a0059 a0062 a0064 a0065 a0068 a0069 a0070	a0001c0001 a0001c0002 a0001c0005 others(116): Show a0001c0001 a0001c0002 a0001c0005 a0001c0009 a0001c0010 a0001c0013 a0001c0017 a0001c0018 a0001c0027 a0001c0039 a0001c0048 a0001c0049 a0001c0050 a0001c0068 a0001c0069 a0001c0074 a0001c0075 a0001c0090 a0001c0099 a0001c0100 a0001c0105 a0001c0106 a0001c0182 a0002c0003 a0002c0033 a0002c0034 a0002c0036 a0002c0117 a0002c0119 a0002c0126 a0002c0130 a0002c0132 a0002c0141 a0002c0152 a0002c0153 a0002c0162 a0002c0163 a0002c0166 a0002c0167 a0002c0173 a0002c0174 a0003c0016 a0003c0019 a0003c0023 a0003c0028 a0003c0043 a0003c0056 a0003c0057 a0003c0059 a0003c0061 a0003c0063 a0003c0067 a0003c0073 a0003c0078 a0003c0089 a0003c0091 a0003c0094 a0003c0098 a0003c0110 a0005c0014 a0005c0031 a0005c0115 a0005c0129 a0005c0131 a0005c0135 a0005c0137 a0005c0160 a0008c0012 a0008c0020 a0008c0064 a0009c0051 a0009c0052 a0009c0070 a0011c0054 a0011c0055 a0011c0092 a0011c0111 a0012c0095 a0013c0144 a0013c0170 a0014c0026 a0014c0072 a0015c0120 a0015c0146 a0016c0037 a0016c0178 a0019c0030 a0021c0087 a0022c0040 a0022c0085 a0023c0125 a0023c0180 a0024c0139 a0024c0155 a0026c0157 a0028c0113 a0029c0112 a0030c0097 a0031c0053 a0032c0038 a0033c0071 a0034c0108 a0035c0081 a0037c0079 a0038c0080 a0040c0086 a0044c0168 a0046c0181 a0052c0133 a0054c0138 a0055c0121 a0056c0154 a0059c0156 a0062c0136 a0064c0116 a0065c0176 a0068c0122 a0069c0114 a0070c0177	a0001c0001t0001 a0001c0001t0004 a0001c0002t0001 others(130): Show a0001c0001t0001 a0001c0001t0004 a0001c0002t0001 a0001c0005t0002 a0001c0009t0001 a0001c0010t0001 a0001c0010t0007 a0001c0013t0001 a0001c0013t0002 a0001c0017t0001 a0001c0018t0001 a0001c0018t0007 a0001c0027t0001 a0001c0039t0001 a0001c0048t0002 a0001c0049t0001 a0001c0050t0003 a0001c0068t0002 a0001c0069t0007 a0001c0074t0001 a0001c0075t0001 a0001c0090t0007 a0001c0099t0001 a0001c0100t0003 a0001c0105t0001 a0001c0106t0001 a0001c0182t0001 a0002c0003t0001 a0002c0003t0003 a0002c0033t0001 a0002c0034t0001 a0002c0034t0004 a0002c0036t0001 a0002c0117t0001 a0002c0119t0002 a0002c0126t0008 a0002c0130t0003 a0002c0132t0003 a0002c0141t0001 a0002c0152t0001 a0002c0153t0002 a0002c0162t0003 a0002c0163t0001 a0002c0166t0014 a0002c0167t0006 a0002c0173t0001 a0002c0174t0001 a0003c0016t0004 a0003c0019t0004 a0003c0023t0001 a0003c0023t0002 a0003c0028t0004 a0003c0028t0006 a0003c0043t0018 a0003c0056t0008 a0003c0057t0004 a0003c0059t0013 a0003c0061t0001 a0003c0063t0009 a0003c0067t0006 a0003c0073t0001 a0003c0078t0009 a0003c0089t0002 a0003c0091t0005 a0003c0094t0003 a0003c0098t0002 a0003c0110t0005 a0005c0014t0001 a0005c0014t0007 a0005c0014t0009 a0005c0031t0002 a0005c0115t0008 a0005c0129t0004 a0005c0131t0003 a0005c0135t0006 a0005c0137t0004 a0005c0160t0008 a0008c0012t0002 a0008c0012t0008 a0008c0012t0011 a0008c0020t0011 a0008c0020t0012 a0008c0064t0001 a0009c0051t0003 a0009c0052t0001 a0009c0070t0001 a0011c0054t0002 a0011c0055t0001 a0011c0092t0006 a0011c0111t0008 a0012c0095t0001 a0013c0144t0001 a0013c0170t0011 a0014c0026t0005 a0014c0072t0004 a0015c0120t0002 a0015c0146t0004 a0016c0037t0001 a0016c0178t0001 a0019c0030t0001 a0019c0030t0020 a0021c0087t0005 a0022c0040t0003 a0022c0085t0001 a0023c0125t0001 a0023c0180t0001 a0024c0139t0003 a0024c0155t0001 a0026c0157t0002 a0028c0113t0001 a0029c0112t0001 a0030c0097t0008 a0031c0053t0003 a0032c0038t0017 a0033c0071t0001 a0034c0108t0001 a0035c0081t0010 a0037c0079t0003 a0038c0080t0009 a0040c0086t0005 a0044c0168t0006 a0046c0181t0002 a0052c0133t0001 a0054c0138t0006 a0055c0121t0001 a0056c0154t0006 a0059c0156t0006 a0062c0136t0006 a0064c0116t0007 a0065c0176t0015 a0068c0122t0001 a0069c0114t0006 a0070c0177t0001	a0001c0001t0001g0042 a0001c0001t0001g0089 a0001c0001t0001g0104 others(159): Show a0001c0001t0001g0042 a0001c0001t0001g0089 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0230 a0001c0001t0001g0239 a0001c0001t0004g0209 a0001c0002t0001g0019 a0001c0002t0001g0067 a0001c0002t0001g0091 a0001c0002t0001g0222 a0001c0002t0001g0228 a0001c0005t0002g0006 a0001c0005t0002g0045 a0001c0005t0002g0058 a0001c0005t0002g0189 a0001c0009t0001g0016 a0001c0009t0001g0024 a0001c0009t0001g0161 a0001c0009t0001g0215 a0001c0010t0001g0039 a0001c0010t0001g0129 a0001c0010t0001g0168 a0001c0010t0007g0167 a0001c0013t0001g0063 a0001c0013t0002g0183 a0001c0013t0002g0200 a0001c0017t0001g0021 a0001c0017t0001g0022 a0001c0018t0001g0208 a0001c0018t0007g0084 a0001c0027t0001g0048 a0001c0027t0001g0135 a0001c0039t0001g0020 a0001c0048t0002g0041 a0001c0049t0001g0207 a0001c0050t0003g0113 a0001c0068t0002g0085 a0001c0069t0007g0100 a0001c0074t0001g0047 a0001c0075t0001g0102 a0001c0090t0007g0040 a0001c0099t0001g0107 a0001c0100t0003g0083 a0001c0105t0001g0244 a0001c0106t0001g0055 a0001c0182t0001g0249 a0002c0003t0001g0179 a0002c0003t0001g0185 a0002c0003t0001g0194 a0002c0003t0001g0196 a0002c0003t0003g0198 a0002c0033t0001g0165 a0002c0033t0001g0203 a0002c0034t0001g0235 a0002c0034t0004g0236 a0002c0036t0001g0111 a0002c0036t0001g0118 a0002c0117t0001g0171 a0002c0119t0002g0172 a0002c0126t0008g0234 a0002c0130t0003g0177 a0002c0132t0003g0176 a0002c0141t0001g0160 a0002c0152t0001g0164 a0002c0153t0002g0184 a0002c0162t0003g0036 a0002c0163t0001g0195 a0002c0166t0014g0112 a0002c0167t0006g0119 a0002c0173t0001g0187 a0002c0174t0001g0193 a0003c0016t0004g0054 a0003c0016t0004g0126 a0003c0019t0004g0224 a0003c0023t0001g0062 a0003c0023t0002g0044 a0003c0028t0004g0227 a0003c0028t0006g0153 a0003c0043t0018g0150 a0003c0056t0008g0068 a0003c0057t0004g0125 a0003c0059t0013g0223 a0003c0061t0001g0205 a0003c0063t0009g0204 a0003c0067t0006g0072 a0003c0073t0001g0229 a0003c0078t0009g0241 a0003c0089t0002g0140 a0003c0091t0005g0143 a0003c0094t0003g0120 a0003c0098t0002g0136 a0003c0110t0005g0220 a0005c0014t0001g0027 a0005c0014t0007g0139 a0005c0014t0009g0028 a0005c0031t0002g0029 a0005c0031t0002g0032 a0005c0115t0008g0144 a0005c0129t0004g0163 a0005c0131t0003g0157 a0005c0135t0006g0002 a0005c0137t0004g0005 a0005c0160t0008g0169 a0008c0012t0002g0053 a0008c0012t0008g0213 a0008c0012t0011g0237 a0008c0020t0011g0070 a0008c0020t0012g0110 a0008c0064t0001g0134 a0009c0051t0003g0061 a0009c0052t0001g0216 a0009c0070t0001g0233 a0011c0054t0002g0090 a0011c0055t0001g0219 a0011c0092t0006g0059 a0011c0111t0008g0221 a0012c0095t0001g0007 a0013c0144t0001g0158 a0013c0170t0011g0191 a0014c0026t0005g0008 a0014c0026t0005g0010 a0014c0072t0004g0009 a0015c0120t0002g0197 a0015c0146t0004g0175 a0016c0037t0001g0094 a0016c0037t0001g0115 a0016c0178t0001g0088 a0019c0030t0001g0212 a0019c0030t0020g0086 a0021c0087t0005g0117 a0022c0040t0003g0127 a0022c0085t0001g0092 a0023c0125t0001g0034 a0023c0180t0001g0248 a0024c0139t0003g0015 a0024c0155t0001g0033 a0026c0157t0002g0162 a0028c0113t0001g0132 a0029c0112t0001g0080 a0030c0097t0008g0071 a0031c0053t0003g0096 a0032c0038t0017g0023 a0033c0071t0001g0156 a0034c0108t0001g0123 a0035c0081t0010g0245 a0037c0079t0003g0225 a0038c0080t0009g0206 a0040c0086t0005g0148 a0044c0168t0006g0152 a0046c0181t0002g0247 a0052c0133t0001g0232 a0054c0138t0006g0014 a0055c0121t0001g0173 a0056c0154t0006g0146 a0059c0156t0006g0155 a0062c0136t0006g0003 a0064c0116t0007g0147 a0065c0176t0015g0076 a0068c0122t0001g0188 a0069c0114t0006g0037 a0070c0177t0001g0087	162	250	0.6480	-25	c.999 others(42): Show c.9999-132_9999-108delCAGAAAAGAATTCAGAATGCAGTCT	LRP2	ENSG00000081479.15	transcript	ENST00000649046.1	protein_coding	51/78			chr2	TogoVar
LRP2_chr2_169122109_169367534	169357289	TTTTTATT others(18): Show TTTTTATTTTATTTTATTTTATTTTA	T T	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG01255.hp1 HG02080.hp2 others(9): Show HG00558.hp2 HG01255.hp1 HG02080.hp2 HG02109.hp1 HG03225.hp2 HG03471.hp2 NA18971.hp1 NA19007.hp1 NA19060.hp1 NA19074.hp2 NA19079.hp1 NA19240.hp2	a0001 a0005 a0006 others(7): Show a0001 a0005 a0006 a0010 a0016 a0035 a0049 a0053 a0063 a0070	a0001c0001 a0001c0005 a0005c0014 others(9): Show a0001c0001 a0001c0005 a0005c0014 a0006c0004 a0010c0029 a0016c0037 a0016c0178 a0035c0081 a0049c0151 a0053c0134 a0063c0161 a0070c0177	a0001c0001t0001 a0001c0005t0002 a0005c0014t0007 others(9): Show a0001c0001t0001 a0001c0005t0002 a0005c0014t0007 a0006c0004t0003 a0010c0029t0002 a0016c0037t0001 a0016c0178t0001 a0035c0081t0010 a0049c0151t0010 a0053c0134t0001 a0063c0161t0016 a0070c0177t0001	a0001c0001t0001g0104 a0001c0005t0002g0006 a0005c0014t0007g0139 others(9): Show a0001c0001t0001g0104 a0001c0005t0002g0006 a0005c0014t0007g0139 a0006c0004t0003g0103 a0010c0029t0002g0106 a0016c0037t0001g0115 a0016c0178t0001g0088 a0035c0081t0010g0245 a0049c0151t0010g0138 a0053c0134t0001g0137 a0063c0161t0016g0242 a0070c0177t0001g0087	12	250	0.0480	-25	c.79+ others(40): Show c.79+5007_79+5031delTAAAATAAAATAAAATAAAATAAAA	LRP2	ENSG00000081479.15	transcript	ENST00000649046.1	protein_coding	1/78			chr2	TogoVar

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