view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SMOC2_chr6_168436184_168672992 | 168537803 | TGGATGCA others(18): Show |
T | intron_variant | MODIFIER | NA18945.hp1 NA19000.hp2 |
a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0007 a0001c0002t0002g0013 |
2 | 180 | 0.0111 | -25 | c.464 others(42): Show |
SMOC2 | ENSG00000112562.20 | transcript | ENST00000356284.7 | protein_coding | 4/12 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | ||||||
SMOC2_chr6_168436184_168672992 | 168610757 | CATCATTT others(18): Show |
C | intron_variant | MODIFIER | HG01891.hp2 NA18522.hp2 |
a0001a0002 | a0001c0002a0002c0010 | a0001c0002t0002a0002c0010t0001 | a0001c0002t0002g0038 a0002c0010t0001g0130 |
2 | 180 | 0.0111 | -25 | c.907 others(42): Show |
SMOC2 | ENSG00000112562.20 | transcript | ENST00000356284.7 | protein_coding | 9/12 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | ||||||
SMOX_chr20_4143828_4192727 | 4168883 | CTATTTTA others(18): Show |
C | intron_variant | MODIFIER | HG02280.hp1 HG02965.hp1 HG02965.hp2 others(19): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0001a0001c0002t0001a0001c0003t0001others(3): Show | a0001c0001t0001g0020 a0001c0001t0001g0358 a0001c0001t0001g0384 others(19): Show |
22 | 428 | 0.0514 | -25 | c.-26 others(42): Show |
SMOX | ENSG00000088826.18 | transcript | ENST00000305958.9 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
SMTNL2_chr17_4579529_4613319 | 4589938 | CTTTTTTT others(18): Show |
C | intron_variant | MODIFIER | NA18946.hp1 NA18957.hp2 NA18962.hp2 others(6): Show |
a0001 | a0001c0002a0001c0004a0001c0005others(1): Show | a0001c0002t0001a0001c0004t0001a0001c0004t0002others(2): Show | a0001c0002t0001g0085 a0001c0002t0001g0086 a0001c0002t0001g0087 others(6): Show |
9 | 442 | 0.0204 | -25 | c.400 others(42): Show |
SMTNL2 | ENSG00000188176.12 | transcript | ENST00000389313.9 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SMUG1_chr12_54175366_54193985 | 54185472 | AAAAATAA others(18): Show |
A | intron_variant | MODIFIER | HG00423.hp1 NA18969.hp2 NA19076.hp1 |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0003 | a0001c0001t0002g0057 a0001c0001t0003g0134 |
3 | 438 | 0.0069 | -25 | c.-19 others(42): Show |
SMUG1 | ENSG00000123415.16 | transcript | ENST00000682136.1 | protein_coding | 2/3 | chr12 | TogoVar | |||||||
SMUG1_chr12_54175366_54193985 | 54185488 | ATAAATAA others(18): Show |
A | intron_variant | MODIFIER | HG00597.hp2 HG00735.hp1 HG01069.hp1 others(29): Show |
a0001a0005 | a0001c0001a0005c0006 | a0001c0001t0001a0001c0001t0004a0001c0001t0012others(2): Show | a0001c0001t0001g0011 a0001c0001t0001g0018 a0001c0001t0001g0066 others(14): Show |
32 | 438 | 0.0731 | -25 | c.-19 others(42): Show |
SMUG1 | ENSG00000123415.16 | transcript | ENST00000682136.1 | protein_coding | 2/3 | chr12 | TogoVar | |||||||
SMUG1_chr12_54175366_54193985 | 54188270 | TAATAATA others(18): Show |
T | intron_variant | MODIFIER | HG01975.hp1 HG02083.hp1 HG02165.hp2 others(7): Show |
a0001a0005 | a0001c0001a0005c0006 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(2): Show | a0001c0001t0001g0035 a0001c0001t0001g0156 a0001c0001t0001g0157 others(5): Show |
10 | 438 | 0.0228 | -25 | c.-10 others(42): Show |
SMUG1 | ENSG00000123415.16 | transcript | ENST00000682136.1 | protein_coding | 1/3 | chr12 | TogoVar | |||||||
SMURF1_chr7_99022440_99149108 | 99059402 | AAAAATAA others(18): Show |
A | intron_variant | MODIFIER | HG00140.hp1 HG01243.hp2 HG01346.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0014a0001c0001t0039 | a0001c0001t0014g0197 a0001c0001t0014g0198 a0001c0001t0014g0199 others(1): Show |
4 | 264 | 0.0152 | -25 | c.203 others(42): Show |
SMURF1 | ENSG00000198742.10 | transcript | ENST00000361368.7 | protein_coding | 3/17 | chr7 | TogoVar | |||||||
SMURF1_chr7_99022440_99149108 | 99119003 | ATTTTTTT others(18): Show |
A | intron_variant | MODIFIER | HG00544.hp1 HG00738.hp2 HG01934.hp1 others(3): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0004a0001c0001t0013a0001c0002t0001others(1): Show | a0001c0001t0004g0095 a0001c0001t0013g0093 a0001c0002t0001g0024 others(3): Show |
6 | 264 | 0.0227 | -25 | c.55+ others(42): Show |
SMURF1 | ENSG00000198742.10 | transcript | ENST00000361368.7 | protein_coding | 1/17 | chr7 | TogoVar | |||||||
SMYD1_chr2_88062825_88118384 | 88065214 | TCCCCTCC others(18): Show |
T | upstream_gene_variant | MODIFIER | HG03453.hp2 HG03471.hp2 |
a0001a0002 | a0001c0004a0002c0006 | a0001c0004t0001a0002c0006t0001 | a0001c0004t0001g0246 a0002c0006t0001g0245 |
2 | 338 | 0.0059 | -25 | c.-26 others(36): Show |
SMYD1 | ENSG00000115593.15 | transcript | ENST00000419482.7 | protein_coding | 2610 | chr2 | TogoVar | |||||||
SND1_chr7_127647194_128097593 | 127837363 | GACACGAT others(18): Show |
G | intron_variant | MODIFIER | NA18966.hp1 NA19012.hp2 NA19057.hp2 |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0001a0002c0003t0001 | a0001c0001t0001g0154 a0001c0001t0001g0156 a0002c0003t0001g0155 |
3 | 262 | 0.0115 | -25 | c.124 others(44): Show |
SND1 | ENSG00000197157.11 | transcript | ENST00000354725.8 | protein_coding | 11/23 | chr7 | TogoVar | |||||||
SNED1_chr2_240993618_241100568 | 241009793 | TGTCCCAT others(18): Show |
T | intron_variant | MODIFIER | HG01884.hp1 HG02083.hp1 HG02109.hp1 others(39): Show |
a0001a0002a0003others(7): Show | a0001c0002a0001c0016a0001c0037others(28): Show | a0001c0002t0001a0001c0016t0003a0001c0037t0020others(35): Show | a0001c0002t0001g0075 a0001c0016t0003g0216 a0001c0037t0020g0030 others(39): Show |
42 | 344 | 0.1221 | -25 | c.213 others(44): Show |
SNED1 | ENSG00000162804.15 | transcript | ENST00000310397.13 | protein_coding | 1/31 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SNRNP25_chr16_48828_62669 | 52446 | CAAAAAAA others(18): Show |
C | upstream_gene_variant | MODIFIER | HG01169.hp2 NA18981.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003 | a0001c0001t0001g0001 a0001c0001t0003g0016 |
2 | 424 | 0.0047 | -25 | c.-15 others(36): Show |
SNRNP25 | ENSG00000161981.11 | transcript | ENST00000293861.8 | protein_coding | 1381 | chr16 | TogoVar | |||||||
SNTB2_chr16_69182164_69314052 | 69292412 | TATATATT others(18): Show |
T | intron_variant | MODIFIER | HG01346.hp2 HG01361.hp2 HG02257.hp1 others(10): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0005a0001c0003t0005 | a0001c0001t0005g0112 a0001c0001t0005g0146 a0001c0001t0005g0147 others(10): Show |
13 | 218 | 0.0596 | -25 | c.134 others(44): Show |
SNTB2 | ENSG00000168807.17 | transcript | ENST00000336278.9 | protein_coding | 5/6 | chr16 | TogoVar | |||||||
SNTG1_chr8_49906407_50801692 | 50069583 | ATTTTTTT others(18): Show |
A | intron_variant | MODIFIER | HG02109.hp1 HG03041.hp2 |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0027a0002c0003t0018 | a0001c0001t0027g0070 a0002c0003t0018g0045 |
2 | 106 | 0.0189 | -25 | c.-10 others(48): Show |
SNTG1 | ENSG00000147481.17 | transcript | ENST00000642720.2 | protein_coding | 1/18 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
SNTG1_chr8_49906407_50801692 | 50259511 | AGAAAGAA others(18): Show |
A | intron_variant | MODIFIER | HG03098.hp1 HG03209.hp1 |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0049 | a0001c0001t0004g0074 a0001c0001t0049g0106 |
2 | 106 | 0.0189 | -25 | c.-28 others(44): Show |
SNTG1 | ENSG00000147481.17 | transcript | ENST00000642720.2 | protein_coding | 2/18 | chr8 | TogoVar | |||||||
SNX16_chr8_81794583_81847185 | 81841791 | GAGGAAAG others(18): Show |
G | intron_variant | MODIFIER | HG03239.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0143 | 1 | 306 | 0.0033 | -25 | c.-97 others(40): Show |
SNX16 | ENSG00000104497.15 | transcript | ENST00000345957.9 | protein_coding | 1/7 | chr8 | TogoVar | |||||||
SNX18_chr5_54512759_54551586 | 54512808 | TCCTTCCT others(18): Show |
T | upstream_gene_variant | MODIFIER | HG00673.hp2 HG00741.hp1 HG01192.hp2 others(20): Show |
a0001a0005 | a0001c0002a0001c0006a0005c0013 | a0001c0002t0001a0001c0002t0002a0001c0002t0008others(4): Show | a0001c0002t0001g0002 a0001c0002t0001g0004 a0001c0002t0001g0029 others(16): Show |
23 | 390 | 0.0590 | -25 | c.-51 others(36): Show |
SNX18 | ENSG00000178996.14 | transcript | ENST00000381410.5 | protein_coding | 4950 | chr5 | TogoVar | |||||||
SNX27_chr1_151607050_151704080 | 151676270 | ATTTTTTT others(18): Show |
A | intron_variant | MODIFIER | HG02572.hp1 HG02698.hp2 NA20752.hp2 |
a0001 | a0001c0001 | a0001c0001t0130a0001c0001t0144a0001c0001t0154 | a0001c0001t0130g0267 a0001c0001t0144g0011 a0001c0001t0154g0090 |
3 | 366 | 0.0082 | -25 | c.115 others(44): Show |
SNX27 | ENSG00000143376.14 | transcript | ENST00000458013.7 | protein_coding | 7/11 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SNX29_chr16_11971734_12579287 | 12476378 | AAAAAAAT others(18): Show |
A | intron_variant | MODIFIER | HG01884.hp1 NA20129.hp1 |
a0001 | a0001c0001a0001c0022 | a0001c0001t0013a0001c0022t0049 | a0001c0001t0013g0016 a0001c0022t0049g0061 |
2 | 176 | 0.0114 | -25 | c.203 others(44): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 18/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
SNX29_chr16_11971734_12579287 | 12512393 | TATATATA others(18): Show |
T | intron_variant | MODIFIER | HG00733.hp2 HG01175.hp1 HG01496.hp1 others(8): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0003others(5): Show | a0001c0001t0012a0001c0001t0017a0001c0001t0063others(8): Show | a0001c0001t0012g0056 a0001c0001t0017g0025 a0001c0001t0063g0039 others(8): Show |
11 | 176 | 0.0625 | -25 | c.217 others(46): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 19/20 | chr16 | TogoVar | |||||||
SNX29_chr16_11971734_12579287 | 12575844 | TTTTGTTT others(18): Show |
T | downstream_gene_variant | MODIFIER | HG00741.hp2 HG01074.hp1 HG01167.hp1 others(6): Show |
a0001a0002a0004 | a0001c0001a0001c0003a0001c0004others(4): Show | a0001c0001t0009a0001c0003t0002a0001c0003t0062others(5): Show | a0001c0001t0009g0090 a0001c0001t0009g0111 a0001c0003t0002g0077 others(6): Show |
9 | 176 | 0.0511 | -25 | c.*72 others(36): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 1558 | chr16 | TogoVar | |||||||
SNX32_chr11_65828963_65858701 | 65834173 | GGTGGTGT others(18): Show |
G | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(102): Show |
a0001a0002 | a0001c0001a0001c0006a0002c0005 | a0001c0001t0001a0001c0001t0002a0001c0006t0001others(1): Show | a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0006 others(73): Show |
105 | 390 | 0.2692 | -25 | c.36+ others(37): Show |
SNX32 | ENSG00000172803.18 | transcript | ENST00000308342.7 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
SNX6_chr14_34556093_34635148 | 34560278 | TTTTTATT others(18): Show |
T | downstream_gene_variant | MODIFIER | HG02602.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0139 | 1 | 322 | 0.0031 | -25 | c.*28 others(36): Show |
SNX6 | ENSG00000129515.20 | transcript | ENST00000362031.10 | protein_coding | 814 | chr14 | TogoVar | |||||||
SNX8_chr7_2246770_2319441 | 2252711 | GCTCTCCT others(18): Show |
G | 3_prime_UTR_variant | MODIFIER | HG01109.hp2 HG01884.hp1 HG02602.hp2 others(6): Show |
a0001a0002 | a0001c0001a0002c0004 | a0001c0001t0017a0001c0001t0031a0002c0004t0018 | a0001c0001t0017g0196 a0001c0001t0017g0205 a0001c0001t0017g0209 others(6): Show |
9 | 370 | 0.0243 | -25 | c.*23 others(36): Show |
SNX8 | ENSG00000106266.11 | transcript | ENST00000222990.8 | protein_coding | 11/11 | 2320 | chr7 | TogoVar | ||||||
SNX8_chr7_2246770_2319441 | 2278792 | CACTCACA others(18): Show |
C | intron_variant | MODIFIER | HG00099.hp2 HG00280.hp1 HG00423.hp1 others(131): Show |
a0001a0002a0006others(3): Show | a0001c0001a0001c0005a0001c0006others(7): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(24): Show | a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0031 others(131): Show |
134 | 370 | 0.3622 | -25 | c.95- others(38): Show |
SNX8 | ENSG00000106266.11 | transcript | ENST00000222990.8 | protein_coding | 1/10 | chr7 | TogoVar | |||||||
SNX8_chr7_2246770_2319441 | 2278962 | CACTCACA others(18): Show |
C | intron_variant | MODIFIER | HG02572.hp1 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0037 | 1 | 370 | 0.0027 | -25 | c.95- others(38): Show |
SNX8 | ENSG00000106266.11 | transcript | ENST00000222990.8 | protein_coding | 1/10 | chr7 | TogoVar | |||||||
SNX8_chr7_2246770_2319441 | 2302106 | GACGGTCT others(18): Show |
G | intron_variant | MODIFIER | HG01109.hp1 HG02258.hp1 HG02280.hp2 others(2): Show |
a0001a0002a0004 | a0001c0001a0002c0004a0004c0013 | a0001c0001t0005a0001c0001t0008a0002c0004t0008others(1): Show | a0001c0001t0005g0011 a0001c0001t0005g0012 a0001c0001t0008g0270 others(2): Show |
5 | 370 | 0.0135 | -25 | c.94+ others(42): Show |
SNX8 | ENSG00000106266.11 | transcript | ENST00000222990.8 | protein_coding | 1/10 | chr7 | TogoVar | |||||||
SNX8_chr7_2246770_2319441 | 2317251 | CTTTTTTT others(18): Show |
C | upstream_gene_variant | MODIFIER | HG00639.hp1 HG01099.hp1 HG02040.hp1 others(26): Show |
a0001a0003 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(9): Show | a0001c0001t0001g0340 a0001c0001t0001g0341 a0001c0001t0001g0342 others(26): Show |
29 | 370 | 0.0784 | -25 | c.-28 others(36): Show |
SNX8 | ENSG00000106266.11 | transcript | ENST00000222990.8 | protein_coding | 2811 | chr7 | TogoVar | |||||||
SOGA1_chr20_36772447_36868538 | 36773873 | ACATGCGT others(18): Show |
A | downstream_gene_variant | MODIFIER | HG00140.hp2 HG01074.hp2 HG01517.hp2 others(6): Show |
a0001a0006 | a0001c0001a0001c0002a0006c0010 | a0001c0001t0005a0001c0001t0024a0001c0002t0003others(2): Show | a0001c0001t0005g0197 a0001c0001t0005g0232 a0001c0001t0005g0237 others(6): Show |
9 | 282 | 0.0319 | -25 | c.*12 others(38): Show |
SOGA1 | ENSG00000149639.15 | transcript | ENST00000237536.9 | protein_coding | 3573 | chr20 | TogoVar | |||||||
SOGA1_chr20_36772447_36868538 | 36789834 | TATTTTTG others(18): Show |
T | intron_variant | MODIFIER | NA18940.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0098 | 1 | 282 | 0.0036 | -25 | c.483 others(44): Show |
SOGA1 | ENSG00000149639.15 | transcript | ENST00000237536.9 | protein_coding | 14/14 | chr20 | TogoVar | |||||||
SON_chr21_33538038_33582481 | 33577677 | ACACACAC others(18): Show |
A | downstream_gene_variant | MODIFIER | NA19000.hp1 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0140 | 1 | 364 | 0.0028 | -25 | c.*12 others(36): Show |
SON | ENSG00000159140.23 | transcript | ENST00000356577.10 | protein_coding | 197 | chr21 | TogoVar | |||||||
SORBS1_chr10_95306773_95566371 | 95340829 | TGGGATTA others(18): Show |
T | intron_variant | MODIFIER | HG04115.hp1 | a0001 | a0001c0001 | a0001c0001t0006 | a0001c0001t0006g0199 | 1 | 300 | 0.0033 | -25 | c.267 others(42): Show |
SORBS1 | ENSG00000095637.23 | transcript | ENST00000371247.7 | protein_coding | 28/32 | chr10 | TogoVar | |||||||
SORCS2_chr4_7187538_7747827 | 7289632 | GGCAAAGG others(18): Show |
G | intron_variant | MODIFIER | NA18962.hp1 | a0001 | a0001c0002 | a0001c0002t0065 | a0001c0002t0065g0004 | 1 | 168 | 0.0060 | -25 | c.480 others(44): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7587011 | CAGCTAAA others(18): Show |
C | intron_variant | MODIFIER | HG02970.hp2 HG03225.hp1 HG03453.hp1 |
a0001 | a0001c0005a0001c0038 | a0001c0005t0004a0001c0005t0019a0001c0038t0038 | a0001c0005t0004g0101 a0001c0005t0019g0104 a0001c0038t0038g0128 |
3 | 168 | 0.0179 | -25 | c.649 others(44): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 3/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7650724 | CGCCCAGC others(18): Show |
C | intron_variant | MODIFIER | HG02970.hp2 | a0001 | a0001c0005 | a0001c0005t0004 | a0001c0005t0004g0101 | 1 | 168 | 0.0060 | -25 | c.814 others(42): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 4/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS3_chr10_104636290_105270242 | 104684779 | GTTTTTTT others(18): Show |
G | intron_variant | MODIFIER | HG00140.hp2 HG01070.hp2 HG01123.hp1 others(16): Show |
a0001a0010 | a0001c0001a0001c0002a0010c0021 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(4): Show | a0001c0001t0001g0049 a0001c0001t0001g0098 a0001c0001t0002g0084 others(16): Show |
19 | 134 | 0.1418 | -25 | c.627 others(44): Show |
SORCS3 | ENSG00000156395.14 | transcript | ENST00000369701.8 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
SORCS3_chr10_104636290_105270242 | 105242807 | TTATATAT others(18): Show |
T | intron_variant | MODIFIER | HG00609.hp1 HG00741.hp2 HG01070.hp1 others(34): Show |
a0001a0003a0007 | a0001c0001a0001c0002a0001c0003others(5): Show | a0001c0001t0002a0001c0001t0010a0001c0002t0002others(6): Show | a0001c0001t0002g0011 a0001c0001t0002g0014 a0001c0001t0002g0016 others(34): Show |
37 | 134 | 0.2761 | -25 | c.286 others(44): Show |
SORCS3 | ENSG00000156395.14 | transcript | ENST00000369701.8 | protein_coding | 20/26 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
SORD_chr15_45018195_45082185 | 45080307 | TGCATTTG others(18): Show |
T | downstream_gene_variant | MODIFIER | HG00642.hp2 HG01891.hp1 HG02145.hp1 others(16): Show |
a0002a0004 | a0002c0002a0004c0006 | a0002c0002t0003a0002c0002t0040a0004c0006t0039 | a0002c0002t0003g0001 a0002c0002t0003g0027 a0002c0002t0003g0091 others(14): Show |
19 | 308 | 0.0617 | -25 | c.*67 others(36): Show |
SORD | ENSG00000140263.15 | transcript | ENST00000267814.14 | protein_coding | 3123 | chr15 | TogoVar | |||||||
SORT1_chr1_109304575_109402918 | 109378737 | TATATATA others(18): Show |
T | intron_variant | MODIFIER | HG02132.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0076 | 1 | 240 | 0.0042 | -25 | c.307 others(42): Show |
SORT1 | ENSG00000134243.12 | transcript | ENST00000256637.8 | protein_coding | 1/19 | chr1 | TogoVar | |||||||
SOWAHB_chr4_76889152_76903144 | 76897116 | GCGCCTTC others(18): Show |
G | frameshift_variant | HIGH | NA19077.hp1 | a0014 | a0014c0012 | a0014c0012t0027 | a0014c0012t0027g0000 | 1 | 438 | 0.0023 | -25 | c.709 others(32): Show |
p.Ala others(5): Show |
SOWAHB | ENSG00000186212.4 | transcript | ENST00000334306.4 | protein_coding | 1/1 | 1028/3993 | 709/2382 | 237/793 | chr4 | TogoVar | |||
SOWAHB_chr4_76889152_76903144 | 76900842 | AAAAAAAA others(18): Show |
A | upstream_gene_variant | MODIFIER | HG00735.hp2 HG01243.hp1 HG01257.hp2 others(7): Show |
a0003a0007 | a0003c0003a0007c0008 | a0003c0003t0004a0003c0003t0008a0007c0008t0005 | a0003c0003t0004g0000 a0003c0003t0008g0000 a0007c0008t0005g0000 |
10 | 438 | 0.0228 | -25 | c.-30 others(36): Show |
SOWAHB | ENSG00000186212.4 | transcript | ENST00000334306.4 | protein_coding | 2699 | chr4 | TogoVar | |||||||
SOX2_chr3_181706925_181719436 | 181715433 | GTTTTTTT others(18): Show |
G | downstream_gene_variant | MODIFIER | HG00544.hp1 HG00558.hp1 HG00597.hp1 others(75): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(6): Show | a0001c0001t0001g0000 a0001c0001t0002g0000 a0001c0001t0003g0000 others(6): Show |
78 | 412 | 0.1893 | -25 | c.*21 others(36): Show |
SOX2 | ENSG00000181449.4 | transcript | ENST00000325404.3 | protein_coding | 998 | chr3 | TogoVar | |||||||
SOX5_chr12_23524504_23954670 | 23570923 | AAAAAAAA others(18): Show |
A | intron_variant | MODIFIER | HG03209.hp2 | a0001 | a0001c0001 | a0001c0001t0114 | a0001c0001t0114g0119 | 1 | 212 | 0.0047 | -25 | c.134 others(44): Show |
SOX5 | ENSG00000134532.20 | transcript | ENST00000451604.7 | protein_coding | 10/14 | chr12 | TogoVar | |||||||
SOX5_chr12_23524504_23954670 | 23570925 | AAAAAAAT others(18): Show |
A | intron_variant | MODIFIER | HG02970.hp1 NA18522.hp2 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0006a0001c0002t0053 | a0001c0001t0006g0068 a0001c0002t0053g0095 |
2 | 212 | 0.0094 | -25 | c.134 others(44): Show |
SOX5 | ENSG00000134532.20 | transcript | ENST00000451604.7 | protein_coding | 10/14 | chr12 | TogoVar | |||||||
SOX5_chr12_23524504_23954670 | 23570927 | AAAAATAT others(18): Show |
A | intron_variant | MODIFIER | HG01069.hp1 HG01071.hp1 HG01071.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0012a0001c0001t0055others(1): Show | a0001c0001t0002g0105 a0001c0001t0012g0110 a0001c0001t0012g0111 others(2): Show |
5 | 212 | 0.0236 | -25 | c.134 others(44): Show |
SOX5 | ENSG00000134532.20 | transcript | ENST00000451604.7 | protein_coding | 10/14 | chr12 | TogoVar | |||||||
SOX5_chr12_23524504_23954670 | 23770902 | TTTTATAA others(18): Show |
T | intron_variant | MODIFIER | HG03942.hp1 HG04184.hp1 |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0026 | a0001c0001t0002g0006 a0001c0001t0026g0127 |
2 | 212 | 0.0094 | -25 | c.482 others(44): Show |
SOX5 | ENSG00000134532.20 | transcript | ENST00000451604.7 | protein_coding | 3/14 | chr12 | TogoVar | |||||||
SOX6_chr11_15961449_16361546 | 16132398 | GAAAAAAG others(18): Show |
G | intron_variant | MODIFIER | HG04115.hp1 NA18998.hp1 NA19090.hp2 |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0004a0001c0001t0024 | a0001c0001t0002g0083 a0001c0001t0004g0084 a0001c0001t0024g0104 |
3 | 218 | 0.0138 | -25 | c.778 others(44): Show |
SOX6 | ENSG00000110693.19 | transcript | ENST00000683767.1 | protein_coding | 6/15 | chr11 | TogoVar | |||||||
SP100_chr2_230411201_230550606 | 230497488 | GGAGGAGA others(18): Show |
G | intron_variant | MODIFIER | HG02572.hp1 HG03139.hp2 |
a0001 | a0001c0001 | a0001c0001t0008a0001c0001t0020 | a0001c0001t0008g0053 a0001c0001t0020g0125 |
2 | 290 | 0.0069 | -25 | c.164 others(42): Show |
SP100 | ENSG00000067066.17 | transcript | ENST00000340126.9 | protein_coding | 18/28 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SP100_chr2_230411201_230550606 | 230497534 | GAGGAGAG others(18): Show |
G | intron_variant | MODIFIER | HG01346.hp1 HG01981.hp1 HG02257.hp1 others(8): Show |
a0001a0002 | a0001c0001a0002c0005 | a0001c0001t0002a0001c0001t0005a0001c0001t0010others(2): Show | a0001c0001t0002g0071 a0001c0001t0002g0200 a0001c0001t0005g0211 others(8): Show |
11 | 290 | 0.0379 | -25 | c.164 others(42): Show |
SP100 | ENSG00000067066.17 | transcript | ENST00000340126.9 | protein_coding | 18/28 | INFO_REALIGN_3_PRIME | chr2 | TogoVar |