Joint Open Genome and Omics Platform (JoGo)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
ZNF804B_chr7_88754700_89343528	89221691	TTTCTATT others(18): Show TTTCTATTCTATTCTATTCTATTCTA	T T	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG02922.hp2 HG02970.hp1 HG01081.hp1 HG02922.hp2 HG02970.hp1	a0001 a0011 a0001 a0011	a0001c0001 a0011c0013 a0001c0001 a0011c0013	a0001c0001t0002 a0011c0013t0001 a0001c0001t0002 a0011c0013t0001	a0001c0001t0002g0099 a0011c0013t0001g0129 a0011c0013t0001g0130 a0001c0001t0002g0099 a0011c0013t0001g0129 a0011c0013t0001g0130	3	42	0.0714	-25	c.249 others(42): Show c.249+3433_249+3457delTCTATTCTATTCTATTCTATTCTAT	ZNF804B	ENSG00000182348.7	transcript	ENST00000333190.5	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr7	TogoVar
ZNF831_chr20_59158821_59264113	59260766	CACCTGGG others(18): Show CACCTGGGAAAGAGTGGCCCAGTTCT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18953.hp1 NA18953.hp1	a0005 a0005	a0005c0005 a0005c0005	a0005c0005t0034 a0005c0005t0034	a0005c0005t0034g0274 a0005c0005t0034g0274	1	310	0.0032	-25	c.60 others(36): Show c.6024_*6048delACCTGGGAAAGAGTGGCCCAGTTCT	ZNF831	ENSG00000124203.7	transcript	ENST00000371030.4	protein_coding		1654		chr20	TogoVar
ZNF837_chr19_58362623_58386030	58375268	AAGTATAT others(18): Show AAGTATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02056.hp1 HG02056.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0062 a0002c0002t0001g0062	1	301	0.0033	-25	c.-13 others(44): Show c.-139-5365_-139-5341delATATATATATATATATATATATACT	ZNF837	ENSG00000152475.7	transcript	ENST00000597582.2	protein_coding	1/2			chr19	TogoVar
ZNF845_chr19_53328749_53361906	53358111	TCTGTTCT others(18): Show TCTGTTCTGTGGGCCTTCAGCATAAA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00639.hp2 HG00639.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0018 a0001c0001t0018	a0001c0001t0018g0288 a0001c0001t0018g0288	1	474	0.0021	-25	c.45 others(36): Show c.4524_*4548delCTGTTCTGTGGGCCTTCAGCATAAA	ZNF845	ENSG00000213799.13	transcript	ENST00000458035.3	protein_coding		1206		chr19	TogoVar
ZNF845_chr19_53328749_53361906	53358493	ACCTCAGT others(18): Show ACCTCAGTGAAGGTCACACTGCAGCG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01069.hp2 HG03139.hp2 HG06807.hp2 HG01069.hp2 HG03139.hp2 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0056 a0001c0001t0007 a0001c0001t0056	a0001c0001t0007g0021 a0001c0001t0056g0109 a0001c0001t0007g0021 a0001c0001t0056g0109	3	474	0.0063	-25	c.49 others(36): Show c.4906_*4930delCCTCAGTGAAGGTCACACTGCAGCG	ZNF845	ENSG00000213799.13	transcript	ENST00000458035.3	protein_coding		1588		chr19	TogoVar
ZNF880_chr19_52364923_52390795	52371382	TCTTTGTC others(18): Show TCTTTGTCACCCAGGCTGGAGTCTCG	T T	intron_variant intron_variant	MODIFIER	HG03486.hp2 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0229 a0001c0001t0001g0229	1	456	0.0022	-25	c.12+ others(40): Show c.12+1427_12+1451delCTCGCTTTGTCACCCAGGCTGGAGT	ZNF880	ENSG00000221923.9	transcript	ENST00000422689.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr19	TogoVar
ZNF888_chr19_52899415_52928428	52920508	AAAAAAAA others(18): Show AAAAAAAAAGAAAAAAAAAGAAAAGG	A A	intron_variant intron_variant	MODIFIER	HG03098.hp1 HG03098.hp1	a0007 a0007	a0007c0012 a0007c0012	a0007c0012t0013 a0007c0012t0013	a0007c0012t0013g0124 a0007c0012t0013g0124	1	424	0.0024	-25	c.-17 others(44): Show c.-177-1596_-177-1572delCCTTTTCTTTTTTTTTCTTTTTTTT	ZNF888	ENSG00000213793.6	transcript	ENST00000638862.2	protein_coding	1/4			chr19	TogoVar
ZNRF3_chr22_28878572_29062488	28937199	ATATATAT others(18): Show ATATATATATATATATATTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG03491.hp2 HG03492.hp1 HG03491.hp2 HG03492.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0030 a0001c0003t0001g0031 a0001c0003t0001g0030 a0001c0003t0001g0031	2	262	0.0076	-25	c.301 others(44): Show c.301-49875_301-49851delATATATATATATATATTTTTTTTTT	ZNRF3	ENSG00000183579.16	transcript	ENST00000544604.7	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr22	TogoVar
ZP3_chr7_76419950_76447069	76436030	CTTTTTTT others(18): Show CTTTTTTTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00140.hp1 HG00733.hp1 others(31): Show HG00099.hp1 HG00140.hp1 HG00733.hp1 HG00735.hp1 HG01099.hp1 HG01123.hp2 HG01167.hp2 HG01168.hp2 HG01169.hp1 HG01175.hp2 HG01255.hp1 HG01261.hp2 HG01358.hp2 HG01517.hp2 HG01993.hp2 HG02055.hp2 HG02135.hp1 HG02735.hp1 HG02809.hp1 HG02895.hp2 HG03490.hp1 HG03704.hp1 HG03927.hp2 HG04199.hp1 HG06807.hp1 NA18747.hp1 NA18906.hp2 NA18956.hp1 NA19054.hp1 NA19063.hp1 NA19090.hp2 NA20129.hp2 NA20752.hp1 NA20905.hp1	a0002 a0003 a0011 a0002 a0003 a0011	a0002c0001 a0003c0004 a0003c0013 others(1): Show a0002c0001 a0003c0004 a0003c0013 a0011c0012	a0002c0001t0001 a0003c0004t0001 a0003c0013t0001 others(1): Show a0002c0001t0001 a0003c0004t0001 a0003c0013t0001 a0011c0012t0001	a0002c0001t0001g0156 a0002c0001t0001g0157 a0002c0001t0001g0162 others(29): Show a0002c0001t0001g0156 a0002c0001t0001g0157 a0002c0001t0001g0162 a0003c0004t0001g0016 a0003c0004t0001g0017 a0003c0004t0001g0344 a0003c0004t0001g0347 a0003c0004t0001g0348 a0003c0004t0001g0349 a0003c0004t0001g0353 a0003c0004t0001g0355 a0003c0004t0001g0356 a0003c0004t0001g0357 a0003c0004t0001g0358 a0003c0004t0001g0359 a0003c0004t0001g0360 a0003c0004t0001g0361 a0003c0004t0001g0362 a0003c0004t0001g0363 a0003c0004t0001g0364 a0003c0004t0001g0365 a0003c0004t0001g0366 a0003c0004t0001g0367 a0003c0004t0001g0368 a0003c0004t0001g0369 a0003c0004t0001g0370 a0003c0004t0001g0371 a0003c0004t0001g0372 a0003c0004t0001g0373 a0003c0004t0001g0374 a0003c0013t0001g0350 a0011c0012t0001g0346	34	45	0.7556	-25	c.831 others(42): Show c.831+1896_831+1920delTTTTTTTTTTTTTTTTTTTTTTTTT	ZP3	ENSG00000188372.15	transcript	ENST00000394857.8	protein_coding	5/7		INFO_REALIGN_3_PRIME	chr7	TogoVar
ZPBP_chr7_49932441_50098246	49970466	CTTTTTTT others(18): Show CTTTTTTTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG03239.hp1 HG03239.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0037 a0001c0001t0001g0037	1	4	0.2500	-25	c.961 others(44): Show c.961+12851_961+12875delAAAAAAAAAAAAAAAAAAAAAAAAA	ZPBP	ENSG00000042813.8	transcript	ENST00000046087.7	protein_coding	7/7			chr7	TogoVar
ZPBP_chr7_49932441_50098246	49982047	GATTATAT others(18): Show GATTATATAATTATATGAATTATATA	G G	intron_variant intron_variant	MODIFIER	HG03471.hp2 HG03688.hp2 NA18522.hp2 others(2): Show HG03471.hp2 HG03688.hp2 NA18522.hp2 NA18954.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0088 a0001c0001t0001g0107 a0001c0001t0001g0112 others(2): Show a0001c0001t0001g0088 a0001c0001t0001g0107 a0001c0001t0001g0112 a0001c0001t0001g0212 a0001c0001t0001g0224	5	259	0.0193	-25	c.961 others(42): Show c.961+1270_961+1294delTATATAATTCATATAATTATATAAT	ZPBP	ENSG00000042813.8	transcript	ENST00000046087.7	protein_coding	7/7			chr7	TogoVar
ZPBP_chr7_49932441_50098246	50062781	TAAAAAAA others(18): Show TAAAAAAATACCTTCTCTTAATAACA	T T	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02886.hp1 HG02895.hp2 others(2): Show HG02630.hp2 HG02886.hp1 HG02895.hp2 NA18522.hp1 NA20129.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0231 a0001c0003t0001g0232 a0001c0003t0001g0233 others(2): Show a0001c0003t0001g0231 a0001c0003t0001g0232 a0001c0003t0001g0233 a0001c0003t0001g0234 a0001c0003t0001g0235	5	276	0.0181	-25	c.335 others(42): Show c.335-4665_335-4641delTGTTATTAAGAGAAGGTATTTTTTT	ZPBP	ENSG00000042813.8	transcript	ENST00000046087.7	protein_coding	3/7			chr7	TogoVar
ZRANB3_chr2_135191969_135536218	135426862	AAATATAT others(18): Show AAATATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG03579.hp1 HG03579.hp1	a0002 a0002	a0002c0007 a0002c0007	a0002c0007t0026 a0002c0007t0026	a0002c0007t0026g0004 a0002c0007t0026g0004	1	201	0.0050	-25	c.162 others(44): Show c.162-36067_162-36043delATATATATATATATATATATATATT	ZRANB3	ENSG00000121988.18	transcript	ENST00000264159.11	protein_coding	2/20			chr2	TogoVar
ZSCAN26_chr6_28262143_28283204	28281635	GCTCTGGG others(18): Show GCTCTGGGGAAACCGGCGCTCCCGAC	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01243.hp1 HG02572.hp2 HG02622.hp2 others(4): Show HG01243.hp1 HG02572.hp2 HG02622.hp2 HG02723.hp2 HG02886.hp1 HG03139.hp1 HG03486.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0003 a0002c0002t0001g0023 a0002c0002t0001g0003 a0002c0002t0001g0023	7	422	0.0166	-25	c.45 others(36): Show c.4540_*4564delCTCTGGGGAAACCGGCGCTCCCGAC	ZSCAN26	ENSG00000197062.12	transcript	ENST00000421553.7	protein_coding		3432		chr6	TogoVar
ZSWIM7_chr17_15971560_16004704	15976122	TATATATA others(18): Show TATATATATATATATATATAAATAAA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01123.hp1 HG02027.hp2 HG02056.hp1 others(5): Show HG01123.hp1 HG02027.hp2 HG02056.hp1 HG02080.hp1 HG02523.hp1 HG03942.hp1 NA18985.hp1 NA18995.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0002 a0001c0001t0004	a0001c0001t0002g0001 a0001c0001t0002g0053 a0001c0001t0004g0010 others(3): Show a0001c0001t0002g0001 a0001c0001t0002g0053 a0001c0001t0004g0010 a0001c0001t0004g0016 a0001c0001t0004g0127 a0001c0001t0004g0172	8	340	0.0235	-25	c.19 others(36): Show c.1900_*1924delTTTATTTATATATATATATATATAT	ZSWIM7	ENSG00000214941.8	transcript	ENST00000399277.6	protein_coding		437		chr17	TogoVar
ZYG11B_chr1_52721453_52832336	52817795	ATATATAT others(18): Show ATATATATATATATATATATATTTTT	A A	intron_variant intron_variant	MODIFIER	HG03834.hp1 HG03834.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0102 a0001c0002t0003g0102	1	337	0.0030	-25	c.204 others(44): Show c.2044+1168_2044+1192delATATATATATATATATATATTTTTT	ZYG11B	ENSG00000162378.13	transcript	ENST00000294353.7	protein_coding	13/13		INFO_REALIGN_3_PRIME	chr1	TogoVar
ZYG11B_chr1_52721453_52832336	52817797	ATATATAT others(18): Show ATATATATATATATATATATTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01943.hp1 HG02280.hp1 HG00639.hp2 HG01943.hp1 HG02280.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0006 a0001c0002t0003 a0001c0001t0006 a0001c0002t0003	a0001c0001t0006g0002 a0001c0001t0006g0003 a0001c0002t0003g0103 a0001c0001t0006g0002 a0001c0001t0006g0003 a0001c0002t0003g0103	3	305	0.0098	-25	c.204 others(44): Show c.2044+1170_2044+1194delATATATATATATATATATTTTTTTT	ZYG11B	ENSG00000162378.13	transcript	ENST00000294353.7	protein_coding	13/13		INFO_REALIGN_3_PRIME	chr1	TogoVar
ZYG11B_chr1_52721453_52832336	52817801	ATATATAT others(18): Show ATATATATATATATATTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG03927.hp2 HG03927.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0037 a0001c0001t0037	a0001c0001t0037g0166 a0001c0001t0037g0166	1	342	0.0029	-25	c.204 others(44): Show c.2044+1174_2044+1198delATATATATATATATTTTTTTTTTTT	ZYG11B	ENSG00000162378.13	transcript	ENST00000294353.7	protein_coding	13/13		INFO_REALIGN_3_PRIME	chr1	TogoVar
ZYG11B_chr1_52721453_52832336	52817807	ATATATAT others(18): Show ATATATATATTTTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	NA19070.hp2 NA19070.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0311 a0001c0001t0002g0311	1	324	0.0031	-25	c.204 others(44): Show c.2044+1180_2044+1204delATATATATTTTTTTTTTTTTTTTTT	ZYG11B	ENSG00000162378.13	transcript	ENST00000294353.7	protein_coding	13/13		INFO_REALIGN_3_PRIME	chr1	TogoVar
ZYG11B_chr1_52721453_52832336	52817811	ATATATTT others(18): Show ATATATTTTTTTTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02280.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0218 a0001c0001t0005g0218	1	335	0.0030	-25	c.204 others(44): Show c.2044+1184_2044+1208delATATTTTTTTTTTTTTTTTTTTTTT	ZYG11B	ENSG00000162378.13	transcript	ENST00000294353.7	protein_coding	13/13		INFO_REALIGN_3_PRIME	chr1	TogoVar

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