view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SORCS1_chr10_106568663_107169706 | 106700442 | AAACAAAC others(19): Show |
A | intron_variant | MODIFIER | HG00408.hp1 HG00408.hp2 HG00438.hp2 others(72): Show |
a0001a0002a0003others(7): Show | a0001c0001a0001c0002a0001c0003others(16): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(31): Show | a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0110 others(72): Show |
75 | 130 | 0.5769 | -26 | c.123 others(45): Show |
SORCS1 | ENSG00000108018.17 | transcript | ENST00000263054.11 | protein_coding | 8/25 | chr10 | TogoVar | |||||||
SORCS2_chr4_7187538_7747827 | 7387725 | TACACATT others(19): Show |
T | intron_variant | MODIFIER | HG03195.hp2 | a0001 | a0001c0009 | a0001c0009t0001 | a0001c0009t0001g0151 | 1 | 168 | 0.0060 | -26 | c.481 others(43): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7441812 | CACCCTCC others(19): Show |
C | intron_variant | MODIFIER | HG01934.hp2 HG02970.hp1 NA18906.hp2 |
a0001a0003 | a0001c0001a0001c0002a0003c0012 | a0001c0001t0054a0001c0002t0003a0003c0012t0046 | a0001c0001t0054g0007 a0001c0002t0003g0082 a0003c0012t0046g0033 |
3 | 166 | 0.0181 | -26 | c.548 others(45): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 2/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS2_chr4_7187538_7747827 | 7461896 | GTGCTGTC others(19): Show |
G | intron_variant | MODIFIER | HG00099.hp1 HG00438.hp1 HG01109.hp1 others(33): Show |
a0001a0002a0003others(5): Show | a0001c0001a0001c0002a0001c0003others(11): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(30): Show | a0001c0001t0002g0130 a0001c0001t0003g0097 a0001c0001t0004g0048 others(33): Show |
36 | 168 | 0.2143 | -26 | c.548 others(45): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 2/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SORCS3_chr10_104636290_105270242 | 104684779 | GTTTTTTT others(19): Show |
G | intron_variant | MODIFIER | HG02970.hp2 HG03927.hp2 NA18988.hp2 |
a0001 | a0001c0001a0001c0002a0001c0006 | a0001c0001t0002a0001c0002t0001a0001c0006t0004 | a0001c0001t0002g0062 a0001c0002t0001g0064 a0001c0006t0004g0058 |
3 | 23 | 0.1304 | -26 | c.627 others(45): Show |
SORCS3 | ENSG00000156395.14 | transcript | ENST00000369701.8 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
SORCS3_chr10_104636290_105270242 | 105242468 | TTATATAT others(19): Show |
T | intron_variant | MODIFIER | HG02647.hp2 HG02922.hp1 HG02965.hp2 others(1): Show |
a0001 | a0001c0002a0001c0003 | a0001c0002t0003a0001c0003t0003 | a0001c0002t0003g0059 a0001c0002t0003g0070 a0001c0003t0003g0054 others(1): Show |
4 | 127 | 0.0315 | -26 | c.286 others(45): Show |
SORCS3 | ENSG00000156395.14 | transcript | ENST00000369701.8 | protein_coding | 20/26 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
SORT1_chr1_109304575_109402918 | 109378699 | GATATATA others(19): Show |
G | intron_variant | MODIFIER | HG00140.hp2 HG01074.hp1 HG01952.hp2 others(17): Show |
a0001a0002 | a0001c0002a0001c0003a0001c0004others(2): Show | a0001c0002t0003a0001c0002t0006a0001c0003t0008others(5): Show | a0001c0002t0003g0205 a0001c0002t0003g0208 a0001c0002t0003g0209 others(17): Show |
20 | 38 | 0.5263 | -26 | c.307 others(43): Show |
SORT1 | ENSG00000134243.12 | transcript | ENST00000256637.8 | protein_coding | 1/19 | chr1 | TogoVar | |||||||
SOS2_chr14_50112130_50236578 | 50178664 | GTGTGTGC others(19): Show |
G | intron_variant | MODIFIER | NA18977.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0251 | 1 | 377 | 0.0027 | -26 | c.969 others(43): Show |
SOS2 | ENSG00000100485.12 | transcript | ENST00000216373.10 | protein_coding | 7/22 | chr14 | TogoVar | |||||||
SOS2_chr14_50112130_50236578 | 50178666 | GTGTGCAT others(19): Show |
G | intron_variant | MODIFIER | HG01255.hp2 HG01433.hp2 HG01496.hp1 others(6): Show |
a0001a0002 | a0001c0001a0002c0004a0002c0016 | a0001c0001t0001a0002c0004t0001a0002c0016t0001 | a0001c0001t0001g0239 a0001c0001t0001g0257 a0001c0001t0001g0258 others(6): Show |
9 | 303 | 0.0297 | -26 | c.969 others(43): Show |
SOS2 | ENSG00000100485.12 | transcript | ENST00000216373.10 | protein_coding | 7/22 | chr14 | TogoVar | |||||||
SOSTDC1_chr7_16456481_16470738 | 16470044 | TTATATAT others(19): Show |
T | upstream_gene_variant | MODIFIER | HG00140.hp2 HG00408.hp1 HG00438.hp2 others(176): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(4): Show | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0007 others(26): Show |
179 | 226 | 0.7920 | -26 | c.-44 others(37): Show |
SOSTDC1 | ENSG00000171243.8 | transcript | ENST00000307068.5 | protein_coding | 4307 | chr7 | TogoVar | |||||||
SOST_chr17_43748738_43763791 | 43751389 | GAGAGAGA others(19): Show |
G | downstream_gene_variant | MODIFIER | HG01928.hp1 HG01934.hp1 HG01978.hp1 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0001 a0001c0001t0002g0035 |
9 | 420 | 0.0214 | -26 | c.*39 others(37): Show |
SOST | ENSG00000167941.3 | transcript | ENST00000301691.3 | protein_coding | 2348 | chr17 | TogoVar | |||||||
SOWAHB_chr4_76889152_76903144 | 76900841 | AAAAAAAA others(19): Show |
A | upstream_gene_variant | MODIFIER | HG02895.hp2 HG02897.hp2 HG03516.hp1 others(1): Show |
a0004 | a0004c0006 | a0004c0006t0008a0004c0006t0014 | a0004c0006t0008g0000 a0004c0006t0014g0000 |
4 | 436 | 0.0092 | -26 | c.-30 others(37): Show |
SOWAHB | ENSG00000186212.4 | transcript | ENST00000334306.4 | protein_coding | 2698 | chr4 | TogoVar | |||||||
SOX2_chr3_181706925_181719436 | 181715433 | GTTTTTTT others(19): Show |
G | downstream_gene_variant | MODIFIER | HG00099.hp2 HG00280.hp2 HG00323.hp1 others(156): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(5): Show | a0001c0001t0001g0000 a0001c0001t0002g0000 a0001c0001t0003g0000 others(5): Show |
159 | 164 | 0.9695 | -26 | c.*21 others(37): Show |
SOX2 | ENSG00000181449.4 | transcript | ENST00000325404.3 | protein_coding | 998 | chr3 | TogoVar | |||||||
SOX5_chr12_23524504_23954670 | 23570924 | AAAAAAAA others(19): Show |
A | intron_variant | MODIFIER | HG01891.hp1 HG02258.hp2 HG03098.hp1 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0117a0001c0001t0119a0001c0002t0048 | a0001c0001t0117g0083 a0001c0001t0119g0020 a0001c0002t0048g0113 |
3 | 203 | 0.0148 | -26 | c.134 others(45): Show |
SOX5 | ENSG00000134532.20 | transcript | ENST00000451604.7 | protein_coding | 10/14 | chr12 | TogoVar | |||||||
SOX5_chr12_23524504_23954670 | 23570926 | AAAAAATA others(19): Show |
A | intron_variant | MODIFIER | HG00735.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0047 | 1 | 193 | 0.0052 | -26 | c.134 others(45): Show |
SOX5 | ENSG00000134532.20 | transcript | ENST00000451604.7 | protein_coding | 10/14 | chr12 | TogoVar | |||||||
SOX5_chr12_23524504_23954670 | 23726117 | CCGAGAGA others(19): Show |
C | intron_variant | MODIFIER | HG02109.hp1 HG02257.hp2 HG03195.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0007a0001c0001t0018a0001c0001t0081others(1): Show | a0001c0001t0007g0023 a0001c0001t0007g0198 a0001c0001t0018g0022 others(2): Show |
5 | 210 | 0.0238 | -26 | c.810 others(43): Show |
SOX5 | ENSG00000134532.20 | transcript | ENST00000451604.7 | protein_coding | 6/14 | chr12 | TogoVar | |||||||
SOX5_chr12_23524504_23954670 | 23804915 | TTATATAT others(19): Show |
T | intron_variant | MODIFIER | HG02486.hp1 HG02970.hp2 HG03130.hp2 others(2): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0003a0001c0001t0036a0001c0001t0112others(2): Show | a0001c0001t0003g0086 a0001c0001t0036g0117 a0001c0001t0112g0001 others(2): Show |
5 | 13 | 0.3846 | -26 | c.481 others(45): Show |
SOX5 | ENSG00000134532.20 | transcript | ENST00000451604.7 | protein_coding | 3/14 | chr12 | TogoVar | |||||||
SOX6_chr11_15961449_16361546 | 16063496 | TTATATAT others(19): Show |
T | intron_variant | MODIFIER | HG02622.hp1 HG02630.hp2 HG02818.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0005a0001c0001t0009 | a0001c0001t0004g0094 a0001c0001t0005g0034 a0001c0001t0009g0038 others(1): Show |
4 | 32 | 0.1250 | -26 | c.110 others(45): Show |
SOX6 | ENSG00000110693.19 | transcript | ENST00000683767.1 | protein_coding | 9/15 | chr11 | TogoVar | |||||||
SOX6_chr11_15961449_16361546 | 16231695 | AAATAGGT others(19): Show |
A | intron_variant | MODIFIER | HG01106.hp2 HG02572.hp2 HG02615.hp2 others(5): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0003a0001c0001t0009others(4): Show | a0001c0001t0001g0047 a0001c0001t0003g0003 a0001c0001t0009g0045 others(5): Show |
8 | 216 | 0.0370 | -26 | c.535 others(43): Show |
SOX6 | ENSG00000110693.19 | transcript | ENST00000683767.1 | protein_coding | 4/15 | chr11 | TogoVar | |||||||
SOX6_chr11_15961449_16361546 | 16291229 | TTATATAT others(19): Show |
T | intron_variant | MODIFIER | HG03579.hp1 | a0001 | a0001c0001 | a0001c0001t0018 | a0001c0001t0018g0122 | 1 | 2 | 0.5000 | -26 | c.445 others(45): Show |
SOX6 | ENSG00000110693.19 | transcript | ENST00000683767.1 | protein_coding | 3/15 | chr11 | TogoVar | |||||||
SP100_chr2_230411201_230550606 | 230510473 | CTTTTTTT others(19): Show |
C | intron_variant | MODIFIER | HG03486.hp1 | a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0096 | 1 | 2 | 0.5000 | -26 | c.205 others(43): Show |
SP100 | ENSG00000067066.17 | transcript | ENST00000340126.9 | protein_coding | 23/28 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SP9_chr2_174329954_174343500 | 174330089 | TTGCTTAG others(19): Show |
T | upstream_gene_variant | MODIFIER | NA18957.hp1 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0001 | 1 | 402 | 0.0025 | -26 | c.-50 others(37): Show |
SP9 | ENSG00000217236.2 | transcript | ENST00000394967.3 | protein_coding | 4864 | chr2 | TogoVar | |||||||
SPACA4_chr19_48601742_48612714 | 48602702 | AAAATATA others(19): Show |
A | upstream_gene_variant | MODIFIER | HG01358.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0000 | 1 | 378 | 0.0026 | -26 | c.-42 others(37): Show |
SPACA4 | ENSG00000177202.3 | transcript | ENST00000321762.3 | protein_coding | 4039 | chr19 | TogoVar | |||||||
SPACA7_chr13_112371355_112439689 | 112383111 | AAAAGAAA others(19): Show |
A | intron_variant | MODIFIER | HG00140.hp1 HG00323.hp2 HG00673.hp1 others(29): Show |
a0001a0002 | a0001c0001a0001c0004a0002c0002 | a0001c0001t0001a0001c0004t0001a0002c0002t0001 | a0001c0001t0001g0333 a0001c0001t0001g0339 a0001c0001t0001g0340 others(29): Show |
32 | 259 | 0.1236 | -26 | c.94+ others(41): Show |
SPACA7 | ENSG00000153498.12 | transcript | ENST00000283550.8 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | ||||||
SPACDR_chr7_100451620_100469260 | 100458195 | GGTGTGTG others(19): Show |
G | intron_variant | MODIFIER | HG01517.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0211 | 1 | 63 | 0.0159 | -26 | c.388 others(43): Show |
SPACDR | ENSG00000185955.5 | transcript | ENST00000332375.4 | protein_coding | 2/2 | chr7 | TogoVar | |||||||
SPAG16_chr2_213279464_214415501 | 213310319 | AACACACA others(19): Show |
A | intron_variant | MODIFIER | HG02109.hp1 | a0003 | a0003c0003 | a0003c0003t0003 | a0003c0003t0003g0019 | 1 | 2 | 0.5000 | -26 | c.398 others(41): Show |
SPAG16 | ENSG00000144451.20 | transcript | ENST00000331683.10 | protein_coding | 4/15 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPAG16_chr2_213279464_214415501 | 213468461 | CTCTATGT others(19): Show |
C | intron_variant | MODIFIER | HG02015.hp1 HG02922.hp1 NA19087.hp1 |
a0007a0009a0011 | a0007c0007a0009c0008a0011c0009 | a0007c0007t0001a0009c0008t0001a0011c0009t0001 | a0007c0007t0001g0083 a0009c0008t0001g0084 a0011c0009t0001g0085 |
3 | 85 | 0.0353 | -26 | c.943 others(45): Show |
SPAG16 | ENSG00000144451.20 | transcript | ENST00000331683.10 | protein_coding | 9/15 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPAG16_chr2_213279464_214415501 | 213468517 | CTATGTAT others(19): Show |
C | intron_variant | MODIFIER | HG02015.hp1 HG02922.hp1 NA19087.hp1 |
a0007a0009a0011 | a0007c0007a0009c0008a0011c0009 | a0007c0007t0001a0009c0008t0001a0011c0009t0001 | a0007c0007t0001g0083 a0009c0008t0001g0084 a0011c0009t0001g0085 |
3 | 86 | 0.0349 | -26 | c.943 others(45): Show |
SPAG16 | ENSG00000144451.20 | transcript | ENST00000331683.10 | protein_coding | 9/15 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPAG16_chr2_213279464_214415501 | 213468536 | TATATATA others(19): Show |
T | intron_variant | MODIFIER | HG02886.hp2 HG03225.hp1 HG03579.hp2 others(1): Show |
a0001a0002a0005 | a0001c0001a0002c0002a0005c0005 | a0001c0001t0002a0002c0002t0002a0005c0005t0001 | a0001c0001t0002g0072 a0002c0002t0002g0073 a0002c0002t0002g0074 others(1): Show |
4 | 86 | 0.0465 | -26 | c.943 others(45): Show |
SPAG16 | ENSG00000144451.20 | transcript | ENST00000331683.10 | protein_coding | 9/15 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPAG16_chr2_213279464_214415501 | 213593746 | CTTTTTTT others(19): Show |
C | intron_variant | MODIFIER | HG02015.hp1 NA19087.hp1 |
a0007a0011 | a0007c0007a0011c0009 | a0007c0007t0001a0011c0009t0001 | a0007c0007t0001g0083 a0011c0009t0001g0085 |
2 | 7 | 0.2857 | -26 | c.107 others(49): Show |
SPAG16 | ENSG00000144451.20 | transcript | ENST00000331683.10 | protein_coding | 10/15 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPAG16_chr2_213279464_214415501 | 213871865 | CACACACA others(19): Show |
C | intron_variant | MODIFIER | HG02109.hp1 HG02647.hp1 HG03239.hp2 |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0001a0003c0003t0003 | a0001c0001t0001g0048 a0001c0001t0001g0066 a0003c0003t0003g0019 |
3 | 74 | 0.0405 | -26 | c.121 others(45): Show |
SPAG16 | ENSG00000144451.20 | transcript | ENST00000331683.10 | protein_coding | 11/15 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPAG16_chr2_213279464_214415501 | 213932147 | CATATATA others(19): Show |
C | intron_variant | MODIFIER | HG02015.hp1 HG02293.hp1 |
a0002a0007 | a0002c0002a0007c0007 | a0002c0002t0001a0007c0007t0001 | a0002c0002t0001g0001 a0007c0007t0001g0083 |
2 | 10 | 0.2000 | -26 | c.140 others(45): Show |
SPAG16 | ENSG00000144451.20 | transcript | ENST00000331683.10 | protein_coding | 12/15 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPAG16_chr2_213279464_214415501 | 214126033 | TCCTTCCT others(19): Show |
T | intron_variant | MODIFIER | HG02895.hp1 HG02895.hp2 HG03130.hp2 others(7): Show |
a0001a0002a0003others(1): Show | a0001c0001a0002c0002a0003c0003others(1): Show | a0001c0001t0001a0002c0002t0001a0003c0003t0001others(1): Show | a0001c0001t0001g0025 a0001c0001t0001g0039 a0001c0001t0001g0061 others(7): Show |
10 | 77 | 0.1299 | -26 | c.159 others(47): Show |
SPAG16 | ENSG00000144451.20 | transcript | ENST00000331683.10 | protein_coding | 14/15 | chr2 | TogoVar | |||||||
SPAG16_chr2_213279464_214415501 | 214126035 | CTTCCTTC others(19): Show |
C | intron_variant | MODIFIER | HG01516.hp1 HG03490.hp2 |
a0003 | a0003c0003 | a0003c0003t0001 | a0003c0003t0001g0040 a0003c0003t0001g0059 |
2 | 86 | 0.0233 | -26 | c.159 others(47): Show |
SPAG16 | ENSG00000144451.20 | transcript | ENST00000331683.10 | protein_coding | 14/15 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPAG16_chr2_213279464_214415501 | 214261107 | CAAAAAAA others(19): Show |
C | intron_variant | MODIFIER | HG03130.hp1 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0075 | 1 | 46 | 0.0217 | -26 | c.172 others(49): Show |
SPAG16 | ENSG00000144451.20 | transcript | ENST00000331683.10 | protein_coding | 15/15 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPAG1_chr8_100153587_100246904 | 100214988 | CATATATA others(19): Show |
C | intron_variant | MODIFIER | HG02559.hp1 | a0001 | a0001c0003 | a0001c0003t0001 | a0001c0003t0001g0077 | 1 | 66 | 0.0152 | -26 | c.153 others(45): Show |
SPAG1 | ENSG00000104450.13 | transcript | ENST00000388798.7 | protein_coding | 12/18 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
SPATA31C1_chr9_87912962_87928657 | 87915016 | GGAGGTCT others(19): Show |
G | upstream_gene_variant | MODIFIER | NA20300.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 1 | 386 | 0.0026 | -26 | c.-29 others(37): Show |
SPATA31C1 | ENSG00000230246.9 | transcript | ENST00000706933.1 | protein_coding | 2945 | chr9 | TogoVar | |||||||
SPATA31D3_chr9_81938500_81955093 | 81945273 | CTTTTTTT others(19): Show |
C | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp1 HG02451.hp2 others(8): Show |
a0001a0004a0011others(4): Show | a0001c0001a0004c0031a0011c0015others(4): Show | a0001c0001t0002a0004c0031t0002a0011c0015t0010others(4): Show | a0001c0001t0002g0076 a0004c0031t0002g0058 a0011c0015t0010g0013 others(4): Show |
11 | 74 | 0.1486 | -26 | c.293 others(39): Show |
SPATA31D3 | ENSG00000186788.14 | transcript | ENST00000445385.3 | protein_coding | 3/3 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
SPATA5_chr4_122918078_123324433 | 123007542 | GTGTATGT others(19): Show |
G | intron_variant | MODIFIER | HG01346.hp2 HG02738.hp1 NA18961.hp1 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(1): Show | a0001c0001t0001g0050 a0001c0001t0002g0020 a0001c0001t0002g0030 others(4): Show |
7 | 260 | 0.0269 | -26 | c.187 others(47): Show |
SPATA5 | ENSG00000145375.9 | transcript | ENST00000274008.5 | protein_coding | 10/15 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SPATA5_chr4_122918078_123324433 | 123007550 | ATGTGTGT others(19): Show |
A | intron_variant | MODIFIER | HG02257.hp2 HG02559.hp2 HG03130.hp1 |
a0001a0005 | a0001c0001a0005c0008 | a0001c0001t0012a0005c0008t0015a0005c0008t0029 | a0001c0001t0012g0244 a0005c0008t0015g0243 a0005c0008t0029g0242 |
3 | 232 | 0.0129 | -26 | c.187 others(47): Show |
SPATA5 | ENSG00000145375.9 | transcript | ENST00000274008.5 | protein_coding | 10/15 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SPATA5_chr4_122918078_123324433 | 123007568 | ATGTGTGT others(19): Show |
A | intron_variant | MODIFIER | HG00408.hp2 HG00438.hp2 HG00639.hp1 others(71): Show |
a0001a0003a0004others(1): Show | a0001c0001a0001c0004a0003c0003others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(21): Show | a0001c0001t0001g0100 a0001c0001t0001g0107 a0001c0001t0001g0185 others(71): Show |
74 | 226 | 0.3274 | -26 | c.187 others(47): Show |
SPATA5 | ENSG00000145375.9 | transcript | ENST00000274008.5 | protein_coding | 10/15 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SPATA5_chr4_122918078_123324433 | 123007584 | GTGTGTGT others(19): Show |
G | intron_variant | MODIFIER | HG01928.hp1 HG03041.hp2 HG03209.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0033 | a0001c0001t0001g0231 a0001c0001t0002g0255 a0001c0001t0033g0262 |
3 | 260 | 0.0115 | -26 | c.187 others(47): Show |
SPATA5 | ENSG00000145375.9 | transcript | ENST00000274008.5 | protein_coding | 10/15 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SPATA5_chr4_122918078_123324433 | 123323070 | CACATATA others(19): Show |
C | downstream_gene_variant | MODIFIER | HG01975.hp1 HG02965.hp1 |
a0001 | a0001c0001a0001c0004 | a0001c0001t0034a0001c0004t0002 | a0001c0001t0034g0261 a0001c0004t0002g0142 |
2 | 221 | 0.0090 | -26 | c.*90 others(37): Show |
SPATA5 | ENSG00000145375.9 | transcript | ENST00000274008.5 | protein_coding | 3638 | chr4 | TogoVar | |||||||
SPATA5_chr4_122918078_123324433 | 123323160 | CACACATA others(19): Show |
C | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00323.hp1 others(115): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0004a0001c0009others(3): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(31): Show | a0001c0001t0001g0031 a0001c0001t0001g0043 a0001c0001t0001g0050 others(115): Show |
118 | 260 | 0.4538 | -26 | c.*90 others(37): Show |
SPATA5 | ENSG00000145375.9 | transcript | ENST00000274008.5 | protein_coding | 3728 | chr4 | TogoVar | |||||||
SPATC1L_chr21_46156160_46189459 | 46156358 | GATACACA others(19): Show |
G | downstream_gene_variant | MODIFIER | HG00735.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0012 | 1 | 250 | 0.0040 | -26 | c.*49 others(37): Show |
SPATC1L | ENSG00000160284.15 | transcript | ENST00000291672.6 | protein_coding | 4801 | chr21 | TogoVar | |||||||
SPC25_chr2_168865891_168895430 | 168889024 | CATATATA others(19): Show |
C | intron_variant | MODIFIER | HG01081.hp2 HG01106.hp1 |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0041 | 2 | 360 | 0.0056 | -26 | c.199 others(41): Show |
SPC25 | ENSG00000152253.9 | transcript | ENST00000282074.7 | protein_coding | 3/6 | chr2 | TogoVar | |||||||
SPC25_chr2_168865891_168895430 | 168889034 | CATATATA others(19): Show |
C | intron_variant | MODIFIER | HG00733.hp1 HG01361.hp2 HG02886.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0008others(1): Show | a0001c0001t0001g0179 a0001c0001t0002g0114 a0001c0001t0008g0097 others(1): Show |
4 | 355 | 0.0113 | -26 | c.199 others(41): Show |
SPC25 | ENSG00000152253.9 | transcript | ENST00000282074.7 | protein_coding | 3/6 | chr2 | TogoVar | |||||||
SPC25_chr2_168865891_168895430 | 168889058 | CATATATA others(19): Show |
C | intron_variant | MODIFIER | HG00140.hp1 HG00280.hp1 HG00280.hp2 others(118): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(4): Show | a0001c0001t0001g0012 a0001c0001t0001g0048 a0001c0001t0001g0139 others(52): Show |
121 | 335 | 0.3612 | -26 | c.199 others(41): Show |
SPC25 | ENSG00000152253.9 | transcript | ENST00000282074.7 | protein_coding | 3/6 | chr2 | TogoVar | |||||||
SPDYA_chr2_28805834_28855610 | 28819837 | AAAAAAAA others(19): Show |
A | intron_variant | MODIFIER | HG03540.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0011 | 1 | 335 | 0.0030 | -26 | c.294 others(41): Show |
SPDYA | ENSG00000163806.16 | transcript | ENST00000334056.10 | protein_coding | 4/7 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPDYA_chr2_28805834_28855610 | 28819839 | AAAAAAAA others(19): Show |
A | intron_variant | MODIFIER | HG02280.hp1 HG03453.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 a0001c0001t0001g0012 |
2 | 329 | 0.0061 | -26 | c.294 others(41): Show |
SPDYA | ENSG00000163806.16 | transcript | ENST00000334056.10 | protein_coding | 4/7 | INFO_REALIGN_3_PRIME | chr2 | TogoVar |