Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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Select column to sort.

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Results per page.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
TRPC5_chrX_111763011_112087776	112082809	GAGAGAGA others(19): Show GAGAGAGAGAGAGAGAGAGAGAGAGAA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01109.hp1 HG01243.hp1 HG02055.hp1 others(9): Show HG01109.hp1 HG01243.hp1 HG02055.hp1 HG02451.hp2 HG02486.hp1 HG02559.hp2 HG02818.hp2 HG02895.hp1 HG02897.hp1 HG02976.hp2 HG03486.hp2 HG03540.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 others(7): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0012 a0001c0001t0020 a0001c0001t0021 a0001c0001t0023 a0001c0001t0034 a0002c0003t0002	a0001c0001t0002g0023 a0001c0001t0002g0028 a0001c0001t0004g0006 others(9): Show a0001c0001t0002g0023 a0001c0001t0002g0028 a0001c0001t0004g0006 a0001c0001t0005g0008 a0001c0001t0005g0020 a0001c0001t0006g0026 a0001c0001t0012g0027 a0001c0001t0020g0007 a0001c0001t0021g0021 a0001c0001t0023g0019 a0001c0001t0034g0024 a0002c0003t0002g0029	12	161	0.0745	-26	c.-97 others(35): Show c.-978_-953delTTCTCTCTCTCTCTCTCTCTCTCTCT	TRPC5	ENSG00000072315.4	transcript	ENST00000262839.3	protein_coding		34		chrX	TogoVar
TRPC7_chr5_136207745_136370545	136220645	TTTTGCCC others(19): Show TTTTGCCCTTTGCCTTGTGATCTTTGC	T T	intron_variant intron_variant	MODIFIER	HG02273.hp1 HG02273.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0122 a0001c0001t0001g0122	1	258	0.0039	-26	c.234 others(45): Show c.2344-4396_2344-4371delGCAAAGATCACAAGGCAAAGGGCAAA	TRPC7	ENSG00000069018.19	transcript	ENST00000513104.6	protein_coding	10/11			chr5	TogoVar
TRPM1_chr15_30996065_31106725	31072002	TATATATA others(19): Show TATATATATATATATATAGAGAGAGAG	T T	intron_variant intron_variant	MODIFIER	NA18979.hp1 NA18979.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0209 a0001c0001t0002g0209	1	255	0.0039	-26	c.84- others(41): Show c.84-1802_84-1777delCTCTCTCTCTATATATATATATATAT	TRPM1	ENSG00000134160.17	transcript	ENST00000256552.11	protein_coding	3/27			chr15	TogoVar
TRPM3_chr9_70524060_71126621	70752027	TGTGTGTG others(19): Show TGTGTGTGTGTGTGTGTGTGTGTGCGC	T T	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG01168.hp2 HG02148.hp1 others(6): Show HG00642.hp1 HG01168.hp2 HG02148.hp1 HG02257.hp2 HG04184.hp1 NA18955.hp2 NA18977.hp1 NA18978.hp1 NA20752.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0008 others(1): Show a0001c0001 a0001c0002 a0001c0008 a0002c0003	a0001c0001t0001 a0001c0001t0011 a0001c0002t0007 others(4): Show a0001c0001t0001 a0001c0001t0011 a0001c0002t0007 a0001c0002t0016 a0001c0008t0004 a0002c0003t0003 a0002c0003t0008	a0001c0001t0001g0123 a0001c0001t0001g0125 a0001c0001t0011g0020 others(6): Show a0001c0001t0001g0123 a0001c0001t0001g0125 a0001c0001t0011g0020 a0001c0002t0007g0188 a0001c0002t0016g0194 a0001c0008t0004g0089 a0002c0003t0003g0066 a0002c0003t0003g0132 a0002c0003t0008g0015	9	214	0.0421	-26	c.127 others(45): Show c.1272+9548_1272+9573delGCGCACACACACACACACACACACAC	TRPM3	ENSG00000083067.26	transcript	ENST00000677713.2	protein_coding	8/25			chr9	TogoVar
TRPM4_chr19_49152792_49216836	49197296	CTCTTTCT others(19): Show CTCTTTCTTTCTTTTTCTTTCTTTCTT	C C	intron_variant intron_variant	MODIFIER	HG01175.hp2 HG01175.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0048 a0001c0003t0002g0048	1	312	0.0032	-26	c.264 others(43): Show c.2645+436_2645+461delTTCTTTCTTTCTTTCTTTCTTTCTTT	TRPM4	ENSG00000130529.16	transcript	ENST00000252826.10	protein_coding	17/24		INFO_REALIGN_3_PRIME	chr19	TogoVar
TRPM4_chr19_49152792_49216836	49197336	CTTTCTTT others(19): Show CTTTCTTTCTTTCTTTCTTTCTTTCTT	C C	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02258.hp2	a0001 a0001	a0001c0021 a0001c0021	a0001c0021t0002 a0001c0021t0002	a0001c0021t0002g0060 a0001c0021t0002g0060	1	312	0.0032	-26	c.264 others(43): Show c.2645+464_2645+489delTTCTTTCTTTCTTTCTTTCTTTCTTT	TRPM4	ENSG00000130529.16	transcript	ENST00000252826.10	protein_coding	17/24		INFO_REALIGN_3_PRIME	chr19	TogoVar
TRPM6_chr9_74717495_74892921	74841047	TATTGTAA others(19): Show TATTGTAAATTTTACCTTCTAATTAAA	T T	intron_variant intron_variant	MODIFIER	HG03195.hp1 HG03195.hp1	a0002 a0002	a0002c0042 a0002c0042	a0002c0042t0006 a0002c0042t0006	a0002c0042t0006g0219 a0002c0042t0006g0219	1	286	0.0035	-26	c.331 others(41): Show c.331-836_331-811delTTTAATTAGAAGGTAAAATTTACAAT	TRPM6	ENSG00000119121.22	transcript	ENST00000360774.6	protein_coding	4/38			chr9	TogoVar
TRPM8_chr2_233912373_234024522	233927900	TTCTTTCT others(19): Show TTCTTTCTTTCTCTCTCTCTCTCTTTC	T T	intron_variant intron_variant	MODIFIER	HG03225.hp1 HG03225.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0007 a0002c0002t0007	a0002c0002t0007g0008 a0002c0002t0007g0008	1	322	0.0031	-26	c.117 others(43): Show c.117+1250_117+1275delTTCTTTCTCTCTCTCTCTCTTTCTCT	TRPM8	ENSG00000144481.17	transcript	ENST00000324695.9	protein_coding	2/25		INFO_REALIGN_3_PRIME	chr2	TogoVar
TRPM8_chr2_233912373_234024522	234018262	ATATCAAT others(19): Show ATATCAATAATTGCATAATAGGCAACC	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00099.hp1 HG00099.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0035 a0001c0003t0035	a0001c0003t0035g0217 a0001c0003t0035g0217	1	322	0.0031	-26	c.10 others(37): Show c.1008_*1033delATCAATAATTGCATAATAGGCAACCT	TRPM8	ENSG00000144481.17	transcript	ENST00000324695.9	protein_coding	26/26	3652	INFO_REALIGN_3_PRIME	chr2	TogoVar
TRPS1_chr8_115403496_115673975	115408370	GTATATAT others(19): Show GTATATATATATATATATATATATATA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00140.hp1 HG02109.hp2 NA18971.hp2 HG00140.hp1 HG02109.hp2 NA18971.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0003 a0001c0001t0085 a0001c0002t0037 a0001c0001t0003 a0001c0001t0085 a0001c0002t0037	a0001c0001t0003g0033 a0001c0001t0085g0180 a0001c0002t0037g0047 a0001c0001t0003g0033 a0001c0001t0085g0180 a0001c0002t0037g0047	3	192	0.0156	-26	c.56 others(37): Show c.5627_*5652delTATATATATATATATATATATATATA	TRPS1	ENSG00000104447.13	transcript	ENST00000395715.8	protein_coding		125		chr8	TogoVar
TRPS1_chr8_115403496_115673975	115475266	TTATATAT others(19): Show TTATATATATATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG02630.hp1 HG03130.hp1 HG02486.hp1 HG02630.hp1 HG03130.hp1	a0001 a0001	a0001c0002 a0001c0005 a0001c0002 a0001c0005	a0001c0002t0013 a0001c0002t0089 a0001c0005t0029 a0001c0002t0013 a0001c0002t0089 a0001c0005t0029	a0001c0002t0013g0152 a0001c0002t0089g0187 a0001c0005t0029g0151 a0001c0002t0013g0152 a0001c0002t0089g0187 a0001c0005t0029g0151	3	192	0.0156	-26	c.270 others(47): Show c.2701-56840_2701-56815delTATATATATATATATATATATATA TA	TRPS1	ENSG00000104447.13	transcript	ENST00000395715.8	protein_coding	5/6			chr8	TogoVar
TRPS1_chr8_115403496_115673975	115498399	CTCTCTCT others(19): Show CTCTCTCTCTCTCTCTCTATATATATA	C C	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG02615.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0066 a0001c0003t0066	a0001c0003t0066g0116 a0001c0003t0066g0116	1	192	0.0052	-26	c.270 others(47): Show c.2701-79973_2701-79948delTATATATATAGAGAGAGAGAGAGA GA	TRPS1	ENSG00000104447.13	transcript	ENST00000395715.8	protein_coding	5/6			chr8	TogoVar
TRPS1_chr8_115403496_115673975	115498401	CTCTCTCT others(19): Show CTCTCTCTCTCTCTCTATATATATATA	C C	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02976.hp1 HG03139.hp1 others(1): Show HG01891.hp1 HG02976.hp1 HG03139.hp1 HG03579.hp1	a0001 a0001	a0001c0002 a0001c0003 a0001c0002 a0001c0003	a0001c0002t0040 a0001c0003t0007 a0001c0003t0013 a0001c0002t0040 a0001c0003t0007 a0001c0003t0013	a0001c0002t0040g0015 a0001c0003t0007g0002 a0001c0003t0013g0158 others(1): Show a0001c0002t0040g0015 a0001c0003t0007g0002 a0001c0003t0013g0158 a0001c0003t0013g0159	4	192	0.0208	-26	c.270 others(47): Show c.2701-79975_2701-79950delTATATATATATAGAGAGAGAGAGA GA	TRPS1	ENSG00000104447.13	transcript	ENST00000395715.8	protein_coding	5/6			chr8	TogoVar
TRPS1_chr8_115403496_115673975	115498403	CTCTCTCT others(19): Show CTCTCTCTCTCTCTATATATATATATA	C C	intron_variant intron_variant	MODIFIER	HG04184.hp1 HG04184.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0006 a0001c0002t0006	a0001c0002t0006g0058 a0001c0002t0006g0058	1	192	0.0052	-26	c.270 others(47): Show c.2701-79977_2701-79952delTATATATATATATAGAGAGAGAGA GA	TRPS1	ENSG00000104447.13	transcript	ENST00000395715.8	protein_coding	5/6			chr8	TogoVar
TRPS1_chr8_115403496_115673975	115499943	CTTTCTTT others(19): Show CTTTCTTTCTTTCTTTCTTTCTTTTCT	C C	intron_variant intron_variant	MODIFIER	HG02698.hp1 NA19063.hp1 HG02698.hp1 NA19063.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0065 a0001c0001t0003 a0001c0001t0065	a0001c0001t0003g0029 a0001c0001t0065g0082 a0001c0001t0003g0029 a0001c0001t0065g0082	2	192	0.0104	-26	c.270 others(47): Show c.2701-81517_2701-81492delAGAAAAGAAAGAAAGAAAGAAAGA AA	TRPS1	ENSG00000104447.13	transcript	ENST00000395715.8	protein_coding	5/6			chr8	TogoVar
TRPV1_chr17_3560446_3614411	3579916	AGACTGGG others(19): Show AGACTGGGGGATGGGGAAGCTCCAGGC	A A	intron_variant intron_variant	MODIFIER	HG01168.hp1 HG01168.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0165 a0001c0001t0002g0165	1	392	0.0026	-26	c.154 others(43): Show c.1547+515_1547+540delGCCTGGAGCTTCCCCATCCCCCAGTC	TRPV1	ENSG00000196689.13	transcript	ENST00000572705.2	protein_coding	11/16			chr17	TogoVar
TSEN34_chr19_54186308_54199532	54188035	AAGAAAGA others(19): Show AAGAAAGAAAGAAAGAAAGAAAGAAAG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp2 HG00140.hp2 HG00323.hp1 others(177): Show HG00099.hp2 HG00140.hp2 HG00323.hp1 HG00323.hp2 HG00438.hp2 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00639.hp2 HG00673.hp1 HG00733.hp1 HG00738.hp1 HG00738.hp2 HG01069.hp2 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01109.hp1 HG01123.hp2 HG01167.hp2 HG01169.hp1 HG01192.hp1 HG01192.hp2 HG01255.hp2 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01361.hp1 HG01361.hp2 HG01496.hp2 HG01515.hp2 HG01516.hp2 HG01891.hp1 HG01928.hp1 HG01934.hp1 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp2 HG01978.hp1 HG01981.hp2 HG01993.hp2 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp2 HG02071.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp2 HG02129.hp1 HG02129.hp2 HG02155.hp2 HG02165.hp1 HG02273.hp2 HG02293.hp2 HG02300.hp2 HG02451.hp1 HG02486.hp2 HG02630.hp1 HG02647.hp1 HG02735.hp1 HG02738.hp2 HG02809.hp2 HG02818.hp2 HG02886.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03139.hp2 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03486.hp2 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03669.hp1 HG03669.hp2 HG04184.hp1 HG04184.hp2 HG04204.hp2 HG04228.hp2 HG06807.hp2 NA18612.hp2 NA18939.hp2 NA18940.hp1 NA18940.hp2 NA18942.hp1 NA18943.hp1 NA18945.hp2 NA18946.hp1 NA18947.hp1 NA18947.hp2 NA18948.hp2 NA18950.hp1 NA18950.hp2 NA18952.hp1 NA18952.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18955.hp2 NA18959.hp2 NA18960.hp1 NA18960.hp2 NA18963.hp2 NA18965.hp1 NA18966.hp2 NA18967.hp1 NA18967.hp2 NA18968.hp2 NA18970.hp1 NA18970.hp2 NA18973.hp1 NA18973.hp2 NA18976.hp1 NA18978.hp2 NA18979.hp2 NA18982.hp1 NA18983.hp2 NA18985.hp2 NA18989.hp1 NA18990.hp1 NA18991.hp1 NA18991.hp2 NA18994.hp2 NA18995.hp2 NA18998.hp1 NA19000.hp1 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19004.hp1 NA19004.hp2 NA19010.hp1 NA19011.hp2 NA19043.hp1 NA19054.hp1 NA19054.hp2 NA19056.hp2 NA19058.hp1 NA19060.hp2 NA19065.hp1 NA19066.hp1 NA19067.hp1 NA19070.hp2 NA19074.hp1 NA19077.hp2 NA19079.hp1 NA19080.hp1 NA19080.hp2 NA19082.hp1 NA19082.hp2 NA19083.hp1 NA19084.hp1 NA19085.hp2 NA19086.hp1 NA19086.hp2 NA19087.hp2 NA19088.hp1 NA19088.hp2 NA19090.hp1 NA20129.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(2): Show a0001c0001 a0001c0002 a0001c0003 a0001c0007 a0002c0004	a0001c0001t0001 a0001c0001t0003 a0001c0001t0014 others(15): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0014 a0001c0001t0021 a0001c0001t0023 a0001c0002t0002 a0001c0002t0009 a0001c0002t0010 a0001c0002t0015 a0001c0002t0016 a0001c0002t0017 a0001c0002t0033 a0001c0002t0034 a0001c0002t0035 a0001c0002t0036 a0001c0003t0013 a0001c0007t0002 a0002c0004t0002	a0001c0001t0001g0002 a0001c0001t0003g0004 a0001c0001t0003g0005 others(28): Show a0001c0001t0001g0002 a0001c0001t0003g0004 a0001c0001t0003g0005 a0001c0001t0003g0007 a0001c0001t0003g0012 a0001c0001t0014g0004 a0001c0001t0014g0007 a0001c0001t0021g0004 a0001c0001t0023g0017 a0001c0002t0002g0001 a0001c0002t0002g0008 a0001c0002t0002g0011 a0001c0002t0002g0015 a0001c0002t0009g0001 a0001c0002t0010g0001 a0001c0002t0010g0011 a0001c0002t0015g0001 a0001c0002t0016g0001 a0001c0002t0016g0011 a0001c0002t0016g0015 a0001c0002t0017g0001 a0001c0002t0017g0008 a0001c0002t0033g0001 a0001c0002t0034g0001 a0001c0002t0035g0008 a0001c0002t0036g0008 a0001c0003t0013g0003 a0001c0003t0013g0006 a0001c0003t0013g0022 a0001c0007t0002g0001 a0002c0004t0002g0001	180	431	0.4176	-26	c.-33 others(37): Show c.-3329_-3304delAGAAAGAAAGAAAGAAAGAAAGAAAG	TSEN34	ENSG00000170892.13	transcript	ENST00000396388.3	protein_coding		3272		chr19	TogoVar
TSGA13_chr7_130663643_130691545	130690424	TTCTTTCT others(19): Show TTCTTTCTTTCCTTCTCTCTCTCTCTC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0134 a0001c0001t0001g0134	1	386	0.0026	-26	c.-43 others(37): Show c.-4339_-4314delGAGAGAGAGAGAGAAGGAAAGAAAGA	TSGA13	ENSG00000213265.9	transcript	ENST00000356588.8	protein_coding		3880		chr7	TogoVar
TSGA13_chr7_130663643_130691545	130690436	TTCTCTCT others(19): Show TTCTCTCTCTCTCTCTCTCTCTCTCTC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00609.hp2 HG03710.hp1 NA18991.hp2 others(4): Show HG00609.hp2 HG03710.hp1 NA18991.hp2 NA19003.hp1 NA19057.hp2 NA19070.hp2 NA19086.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0001c0001t0001 a0002c0002t0001	a0001c0001t0001g0001 a0002c0002t0001g0027 a0002c0002t0001g0171 a0001c0001t0001g0001 a0002c0002t0001g0027 a0002c0002t0001g0171	7	386	0.0181	-26	c.-43 others(37): Show c.-4351_-4326delGAGAGAGAGAGAGAGAGAGAGAGAGA	TSGA13	ENSG00000213265.9	transcript	ENST00000356588.8	protein_coding		3892		chr7	TogoVar
TSHZ1_chr18_75205797_75294944	75211460	GGGAGCGC others(19): Show GGGAGCGCCCGGAGCGGCGCGCCGGGA	G G	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG02080.hp2 HG02698.hp1 HG02080.hp2 HG02698.hp1	a0001 a0002 a0001 a0002	a0001c0004 a0002c0003 a0001c0004 a0002c0003	a0001c0004t0048 a0002c0003t0031 a0001c0004t0048 a0002c0003t0031	a0001c0004t0048g0100 a0002c0003t0031g0021 a0001c0004t0048g0100 a0002c0003t0031g0021	2	326	0.0061	-26	c.-40 others(35): Show c.-406_-381delGAGCGGCGCGCCGGGAGGAGCGCCCG	TSHZ1	ENSG00000179981.11	transcript	ENST00000580243.3	protein_coding	1/2	381	INFO_REALIGN_3_PRIME	chr18	TogoVar
TSHZ2_chr20_52967358_53500330	53008980	CCTCTCTC others(19): Show CCTCTCTCTCTCTCTCTCTCTCTCTCT	C C	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG02055.hp1 HG02109.hp1 others(5): Show HG01106.hp2 HG02055.hp1 HG02109.hp1 HG02809.hp1 HG02818.hp2 HG02976.hp1 HG03579.hp2 NA19030.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0011 a0002c0003 a0001c0001 a0001c0011 a0002c0003	a0001c0001t0011 a0001c0001t0014 a0001c0001t0041 others(5): Show a0001c0001t0011 a0001c0001t0014 a0001c0001t0041 a0001c0001t0069 a0001c0011t0035 a0001c0011t0081 a0002c0003t0006 a0002c0003t0044	a0001c0001t0011g0100 a0001c0001t0014g0004 a0001c0001t0041g0092 others(5): Show a0001c0001t0011g0100 a0001c0001t0014g0004 a0001c0001t0041g0092 a0001c0001t0069g0033 a0001c0011t0035g0174 a0001c0011t0081g0032 a0002c0003t0006g0143 a0002c0003t0044g0101	8	174	0.0460	-26	c.40+ others(43): Show c.40+35673_40+35698delTCTCTCTCTCTCTCTCTCTCTCTCTC	TSHZ2	ENSG00000182463.17	transcript	ENST00000371497.10	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr20	TogoVar
TSHZ2_chr20_52967358_53500330	53069662	TACACACA others(19): Show TACACACACACACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG03579.hp1 HG03579.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0072 a0001c0001t0072	a0001c0001t0072g0142 a0001c0001t0072g0142	1	174	0.0058	-26	c.40+ others(43): Show c.40+96352_40+96377delACACACACACACACACACACACACAC	TSHZ2	ENSG00000182463.17	transcript	ENST00000371497.10	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr20	TogoVar
TSHZ2_chr20_52967358_53500330	53190086	AATATATA others(19): Show AATATATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG01891.hp1	a0003 a0003	a0003c0006 a0003c0006	a0003c0006t0015 a0003c0006t0015	a0003c0006t0015g0008 a0003c0006t0015g0008	1	174	0.0058	-26	c.41- others(43): Show c.41-63386_41-63361delATATATATATATATATATATATATAT	TSHZ2	ENSG00000182463.17	transcript	ENST00000371497.10	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr20	TogoVar
TSHZ2_chr20_52967358_53500330	53203967	TTGAAAGG others(19): Show TTGAAAGGCTTAGTCCAAAAACCGTAG	T T	intron_variant intron_variant	MODIFIER	NA18957.hp1 NA18957.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0062 a0001c0001t0062	a0001c0001t0062g0022 a0001c0001t0062g0022	1	174	0.0058	-26	c.41- others(43): Show c.41-49529_41-49504delAAAGGCTTAGTCCAAAAACCGTAGTG	TSHZ2	ENSG00000182463.17	transcript	ENST00000371497.10	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr20	TogoVar
TSHZ2_chr20_52967358_53500330	53226119	AACACACA others(19): Show AACACACACACACACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01255.hp2 HG01891.hp2 others(34): Show HG01099.hp1 HG01255.hp2 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG02056.hp2 HG02300.hp1 HG02523.hp2 HG02572.hp2 HG02602.hp2 HG02630.hp1 HG02647.hp2 HG02683.hp1 HG02723.hp1 HG02738.hp2 HG02897.hp2 HG02922.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03130.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp2 HG03471.hp2 HG03579.hp2 HG03688.hp1 HG03927.hp1 NA18906.hp2 NA18995.hp1 NA18995.hp2 NA19057.hp1 NA19077.hp1 NA19085.hp2 NA19090.hp1 NA20805.hp1 NA20805.hp2	a0001 a0002 a0006 others(1): Show a0001 a0002 a0006 a0009	a0001c0001 a0001c0002 a0002c0003 others(2): Show a0001c0001 a0001c0002 a0002c0003 a0006c0008 a0009c0014	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(30): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0001t0008 a0001c0001t0011 a0001c0001t0016 a0001c0001t0022 a0001c0001t0026 a0001c0001t0043 a0001c0001t0045 a0001c0001t0051 a0001c0001t0055 a0001c0001t0076 a0001c0001t0077 a0001c0002t0001 a0001c0002t0002 a0001c0002t0006 a0001c0002t0007 a0001c0002t0013 a0001c0002t0028 a0001c0002t0092 a0002c0003t0005 a0002c0003t0010 a0002c0003t0017 a0002c0003t0027 a0002c0003t0038 a0002c0003t0044 a0002c0003t0085 a0002c0003t0088 a0006c0008t0063 a0009c0014t0079	a0001c0001t0001g0035 a0001c0001t0001g0108 a0001c0001t0002g0115 others(34): Show a0001c0001t0001g0035 a0001c0001t0001g0108 a0001c0001t0002g0115 a0001c0001t0003g0090 a0001c0001t0004g0075 a0001c0001t0006g0087 a0001c0001t0008g0124 a0001c0001t0011g0100 a0001c0001t0016g0015 a0001c0001t0022g0147 a0001c0001t0026g0072 a0001c0001t0043g0169 a0001c0001t0045g0168 a0001c0001t0051g0012 a0001c0001t0055g0021 a0001c0001t0076g0162 a0001c0001t0077g0068 a0001c0002t0001g0133 a0001c0002t0002g0042 a0001c0002t0002g0074 a0001c0002t0006g0114 a0001c0002t0006g0122 a0001c0002t0007g0103 a0001c0002t0013g0050 a0001c0002t0028g0095 a0001c0002t0092g0165 a0002c0003t0005g0014 a0002c0003t0005g0019 a0002c0003t0010g0078 a0002c0003t0017g0150 a0002c0003t0027g0139 a0002c0003t0038g0031 a0002c0003t0044g0101 a0002c0003t0085g0047 a0002c0003t0088g0066 a0006c0008t0063g0044 a0009c0014t0079g0067	37	174	0.2126	-26	c.41- others(43): Show c.41-27364_41-27339delCACACACACACACACACACACACACA	TSHZ2	ENSG00000182463.17	transcript	ENST00000371497.10	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr20	TogoVar
TSHZ2_chr20_52967358_53500330	53466260	TAAAAAAA others(19): Show TAAAAAAAAAAAAAGAAAGAGAAAAAG	T T	intron_variant intron_variant	MODIFIER	HG03225.hp1 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0055 a0001c0001t0055	a0001c0001t0055g0021 a0001c0001t0055g0021	1	174	0.0058	-26	c.9- others(43): Show c.9-20883_*9-20858delAAAAAAAAAAAAAGAAAGAGAAAAAG	TSHZ2	ENSG00000182463.17	transcript	ENST00000371497.10	protein_coding	2/2			chr20	TogoVar
TSNAX_chr1_231523669_231571524	231532131	AACACACA others(19): Show AACACACACACACACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0336 a0001c0001t0001g0336	1	392	0.0026	-26	c.121 others(43): Show c.121+2802_121+2827delCACACACACACACACACACACACACA	TSNAX	ENSG00000116918.15	transcript	ENST00000366639.9	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr1	TogoVar
TSPAN12_chr7_120782320_120863144	120799520	TTAATTAT others(19): Show TTAATTATATATAATTATATATAATTA	T T	intron_variant intron_variant	MODIFIER	NA19030.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0036 a0001c0001t0001g0036	1	294	0.0034	-26	c.612 others(43): Show c.612+7003_612+7028delTAATTATATATAATTATATATAATTA	TSPAN12	ENSG00000106025.9	transcript	ENST00000222747.8	protein_coding	7/7			chr7	TogoVar
TSPAN15_chr10_69446465_69512666	69447633	TGAAGTGA others(19): Show TGAAGTGAAGTTGGTAACTTAAAATCA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02559.hp1 HG02965.hp2 HG02559.hp1 HG02965.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0062 a0002c0002t0002g0237 a0002c0002t0002g0062 a0002c0002t0002g0237	2	340	0.0059	-26	c.-39 others(37): Show c.-3961_-3936delGAAGTGAAGTTGGTAACTTAAAATCA	TSPAN15	ENSG00000099282.10	transcript	ENST00000373290.7	protein_coding		3831		chr10	TogoVar
TSPAN9_chr12_3072379_3291559	3226652	ATGTGTGT others(19): Show ATGTGTGTGTGTGTGTGTGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	NA18943.hp1 NA18944.hp1 NA18952.hp2 others(2): Show NA18943.hp1 NA18944.hp1 NA18952.hp2 NA18989.hp1 NA19002.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0003 a0001c0001t0004 a0001c0001t0051 others(1): Show a0001c0001t0003 a0001c0001t0004 a0001c0001t0051 a0001c0002t0066	a0001c0001t0003g0104 a0001c0001t0004g0152 a0001c0001t0004g0159 others(2): Show a0001c0001t0003g0104 a0001c0001t0004g0152 a0001c0001t0004g0159 a0001c0001t0051g0083 a0001c0002t0066g0103	5	288	0.0174	-26	c.63+ others(43): Show c.63+25426_63+25451delGTGTGTGTGTGTGTGTGTGTGTGTGT	TSPAN9	ENSG00000011105.14	transcript	ENST00000011898.10	protein_coding	3/8		INFO_REALIGN_3_PRIME	chr12	TogoVar
TSPAN9_chr12_3072379_3291559	3226688	GTGTGTGT others(19): Show GTGTGTGTGTGTGTGTGTGTATGTGTA	G G	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02257.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0240 a0001c0001t0001g0240	1	288	0.0035	-26	c.63+ others(43): Show c.63+25436_63+25461delGTGTGTGTGTGTGTGTATGTGTATGT	TSPAN9	ENSG00000011105.14	transcript	ENST00000011898.10	protein_coding	3/8		INFO_REALIGN_3_PRIME	chr12	TogoVar
TSPAN9_chr12_3072379_3291559	3226736	GTGTGTGT others(19): Show GTGTGTGTGTATATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG02895.hp1 HG02897.hp1 HG02895.hp1 HG02897.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0023 a0001c0001t0023	a0001c0001t0023g0001 a0001c0001t0023g0003 a0001c0001t0023g0001 a0001c0001t0023g0003	2	288	0.0069	-26	c.63+ others(43): Show c.63+25482_63+25507delGTGTGTGTATATATATATATATATAT	TSPAN9	ENSG00000011105.14	transcript	ENST00000011898.10	protein_coding	3/8		INFO_REALIGN_3_PRIME	chr12	TogoVar
TSPAN9_chr12_3072379_3291559	3226738	GTGTGTGT others(19): Show GTGTGTGTATATATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG01934.hp2 HG01934.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0087 a0001c0001t0087	a0001c0001t0087g0130 a0001c0001t0087g0130	1	288	0.0035	-26	c.63+ others(43): Show c.63+25484_63+25509delGTGTGTATATATATATATATATATAT	TSPAN9	ENSG00000011105.14	transcript	ENST00000011898.10	protein_coding	3/8		INFO_REALIGN_3_PRIME	chr12	TogoVar
TSPAN9_chr12_3072379_3291559	3226740	GTGTGTAT others(19): Show GTGTGTATATATATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG01993.hp1 HG02027.hp1 HG02083.hp2 others(13): Show HG01993.hp1 HG02027.hp1 HG02083.hp2 HG02135.hp1 HG02293.hp2 HG03225.hp2 HG04115.hp2 NA18612.hp1 NA18948.hp2 NA18989.hp2 NA19030.hp1 NA19043.hp1 NA19070.hp1 NA19088.hp1 NA19091.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(10): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0010 a0001c0001t0016 a0001c0001t0071 a0001c0001t0075 a0001c0001t0086 a0001c0002t0013	a0001c0001t0001g0184 a0001c0001t0003g0105 a0001c0001t0004g0151 others(13): Show a0001c0001t0001g0184 a0001c0001t0003g0105 a0001c0001t0004g0151 a0001c0001t0004g0214 a0001c0001t0005g0029 a0001c0001t0006g0129 a0001c0001t0006g0194 a0001c0001t0006g0248 a0001c0001t0007g0201 a0001c0001t0008g0123 a0001c0001t0010g0025 a0001c0001t0016g0064 a0001c0001t0071g0117 a0001c0001t0075g0173 a0001c0001t0086g0282 a0001c0002t0013g0157	16	288	0.0556	-26	c.63+ others(43): Show c.63+25486_63+25511delGTGTATATATATATATATATATATAT	TSPAN9	ENSG00000011105.14	transcript	ENST00000011898.10	protein_coding	3/8		INFO_REALIGN_3_PRIME	chr12	TogoVar
TSPAN9_chr12_3072379_3291559	3226744	GTATATAT others(19): Show GTATATATATATATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0022 a0001c0001t0022	a0001c0001t0022g0122 a0001c0001t0022g0122	1	288	0.0035	-26	c.63+ others(43): Show c.63+25514_63+25539delATATATATATATATATATATATATAT	TSPAN9	ENSG00000011105.14	transcript	ENST00000011898.10	protein_coding	3/8		INFO_REALIGN_3_PRIME	chr12	TogoVar
TSPAN9_chr12_3072379_3291559	3235207	AAAAAAAA others(19): Show AAAAAAAAAAAATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02572.hp2 NA20805.hp1 HG02572.hp2 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0011 a0001c0001t0009 a0001c0001t0011	a0001c0001t0009g0009 a0001c0001t0011g0180 a0001c0001t0009g0009 a0001c0001t0011g0180	2	288	0.0069	-26	c.63+ others(43): Show c.63+33953_63+33978delAAAAAAAAAATATATATATATATATA	TSPAN9	ENSG00000011105.14	transcript	ENST00000011898.10	protein_coding	3/8		INFO_REALIGN_3_PRIME	chr12	TogoVar
TSPEAR_chr21_44492893_44716572	44659281	TCCTAAGC others(19): Show TCCTAAGCACAAGCACTGATGATACAC	T T	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00280.hp2 HG00323.hp2 others(183): Show HG00280.hp1 HG00280.hp2 HG00323.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00621.hp2 HG00639.hp1 HG00642.hp1 HG00642.hp2 HG00741.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01433.hp1 HG01496.hp1 HG01496.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01952.hp2 HG01975.hp1 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02074.hp1 HG02080.hp2 HG02109.hp2 HG02145.hp1 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02647.hp1 HG02647.hp2 HG02723.hp1 HG02738.hp2 HG02809.hp1 HG02818.hp1 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02922.hp1 HG02922.hp2 HG02970.hp1 HG02976.hp2 HG03017.hp1 HG03041.hp1 HG03098.hp1 HG03098.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03225.hp1 HG03225.hp2 HG03239.hp2 HG03471.hp1 HG03486.hp1 HG03490.hp2 HG03492.hp1 HG03492.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03710.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04184.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG06807.hp1 HG06807.hp2 NA18747.hp2 NA18906.hp2 NA18940.hp1 NA18942.hp2 NA18944.hp1 NA18945.hp2 NA18948.hp1 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18951.hp1 NA18954.hp2 NA18955.hp2 NA18960.hp1 NA18971.hp1 NA18971.hp2 NA18975.hp1 NA18977.hp1 NA18977.hp2 NA18982.hp1 NA18986.hp2 NA18990.hp2 NA19005.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp2 NA19057.hp2 NA19060.hp1 NA19064.hp1 NA19070.hp2 NA19077.hp1 NA19080.hp1 NA19080.hp2 NA19087.hp1 NA19088.hp2 NA19091.hp1 NA19091.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA21309.hp1 homoSapiens_chm13v2.hp1	a0000 a0001 a0002 others(3): Show a0000 a0001 a0002 a0003 a0004 a0007	a0000c0011 a0001c0001 a0001c0002 others(9): Show a0000c0011 a0001c0001 a0001c0002 a0001c0004 a0001c0006 a0001c0009 a0001c0013 a0001c0015 a0002c0003 a0003c0005 a0004c0018 a0007c0014	a0000c0011t0025 a0001c0001t0001 a0001c0001t0002 others(23): Show a0000c0011t0025 a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0009 a0001c0001t0011 a0001c0001t0012 a0001c0001t0014 a0001c0001t0015 a0001c0001t0018 a0001c0001t0019 a0001c0001t0024 a0001c0002t0008 a0001c0004t0010 a0001c0006t0023 a0001c0009t0001 a0001c0013t0002 a0001c0015t0001 a0002c0003t0001 a0003c0005t0001 a0004c0018t0013 a0007c0014t0001	a0000c0011t0025g0111 a0001c0001t0001g0001 a0001c0001t0001g0002 others(183): Show a0000c0011t0025g0111 a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0020 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0032 a0001c0001t0001g0034 a0001c0001t0001g0036 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0062 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0072 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0083 a0001c0001t0001g0085 a0001c0001t0001g0087 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0108 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0126 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0194 a0001c0001t0001g0197 a0001c0001t0001g0199 a0001c0001t0001g0200 a0001c0001t0001g0201 a0001c0001t0001g0202 a0001c0001t0001g0203 a0001c0001t0001g0205 a0001c0001t0001g0206 a0001c0001t0001g0208 a0001c0001t0001g0210 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0213 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0221 a0001c0001t0001g0230 a0001c0001t0001g0232 a0001c0001t0001g0235 a0001c0001t0001g0238 a0001c0001t0001g0240 a0001c0001t0001g0242 a0001c0001t0001g0245 a0001c0001t0001g0249 a0001c0001t0001g0250 a0001c0001t0001g0251 a0001c0001t0001g0254 a0001c0001t0001g0255 a0001c0001t0001g0256 a0001c0001t0001g0257 a0001c0001t0001g0259 a0001c0001t0001g0260 a0001c0001t0001g0261 a0001c0001t0001g0262 a0001c0001t0001g0263 a0001c0001t0001g0267 a0001c0001t0001g0268 a0001c0001t0001g0271 a0001c0001t0001g0272 a0001c0001t0001g0274 a0001c0001t0001g0276 a0001c0001t0001g0277 a0001c0001t0001g0278 a0001c0001t0001g0279 a0001c0001t0001g0280 a0001c0001t0001g0281 a0001c0001t0001g0282 a0001c0001t0001g0283 a0001c0001t0001g0284 a0001c0001t0001g0289 a0001c0001t0001g0290 a0001c0001t0001g0291 a0001c0001t0002g0055 a0001c0001t0002g0109 a0001c0001t0002g0112 a0001c0001t0002g0198 a0001c0001t0002g0258 a0001c0001t0002g0266 a0001c0001t0003g0134 a0001c0001t0003g0196 a0001c0001t0003g0218 a0001c0001t0003g0237 a0001c0001t0003g0239 a0001c0001t0003g0241 a0001c0001t0003g0247 a0001c0001t0003g0287 a0001c0001t0004g0033 a0001c0001t0004g0204 a0001c0001t0004g0243 a0001c0001t0004g0244 a0001c0001t0005g0028 a0001c0001t0005g0100 a0001c0001t0005g0125 a0001c0001t0005g0236 a0001c0001t0005g0246 a0001c0001t0006g0104 a0001c0001t0006g0183 a0001c0001t0006g0264 a0001c0001t0006g0265 a0001c0001t0007g0009 a0001c0001t0007g0103 a0001c0001t0007g0124 a0001c0001t0007g0292 a0001c0001t0009g0037 a0001c0001t0009g0149 a0001c0001t0009g0234 a0001c0001t0011g0042 a0001c0001t0012g0227 a0001c0001t0014g0067 a0001c0001t0015g0152 a0001c0001t0018g0135 a0001c0001t0019g0207 a0001c0001t0024g0285 a0001c0002t0008g0121 a0001c0002t0008g0215 a0001c0004t0010g0088 a0001c0004t0010g0148 a0001c0006t0023g0214 a0001c0009t0001g0098 a0001c0013t0002g0233 a0001c0015t0001g0099 a0002c0003t0001g0107 a0002c0003t0001g0127 a0002c0003t0001g0248 a0003c0005t0001g0294 a0004c0018t0013g0041 a0007c0014t0001g0275	186	294	0.6327	-26	c.82+ others(43): Show c.82+52126_82+52151delGTGTATCATCAGTGCTTGTGCTTAGG	TSPEAR	ENSG00000175894.18	transcript	ENST00000323084.9	protein_coding	1/11			chr21	TogoVar
TSPEAR_chr21_44492893_44716572	44674731	AGTGTGTG others(19): Show AGTGTGTGTGTGTGTGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG02155.hp2 HG02155.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0137 a0001c0001t0001g0137	1	294	0.0034	-26	c.82+ others(43): Show c.82+36676_82+36701delACACACACACACACACACACACACAC	TSPEAR	ENSG00000175894.18	transcript	ENST00000323084.9	protein_coding	1/11			chr21	TogoVar
TSPY1_chrY_9461955_9474749	9472940	TATATATA others(19): Show TATATATATATATATATATATATATAC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01358.hp2 HG01515.hp1 HG02602.hp1 others(4): Show HG01358.hp2 HG01515.hp1 HG02602.hp1 HG02647.hp2 NA18612.hp2 NA19058.hp1 NA20752.hp2	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0004 a0002c0002 a0005c0010 a0001c0004 a0002c0002 a0005c0010	a0001c0004t0002 a0001c0004t0003 a0002c0002t0002 others(1): Show a0001c0004t0002 a0001c0004t0003 a0002c0002t0002 a0005c0010t0002	a0001c0004t0002g0006 a0001c0004t0003g0008 a0002c0002t0002g0002 others(1): Show a0001c0004t0002g0006 a0001c0004t0003g0008 a0002c0002t0002g0002 a0005c0010t0002g0013	7	23	0.3044	-26	c.33 others(37): Show c.3380_*3405delATATATATATATATATATATATATAC	TSPY1	ENSG00000258992.7	transcript	ENST00000451548.6	protein_coding		3192		chrY	TogoVar
TTBK2_chr15_42733730_42925778	42763121	CATATATA others(19): Show CATATATATACATATATACATACATAT	C C	intron_variant intron_variant	MODIFIER	HG02976.hp2 HG02976.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0047 a0001c0001t0047	a0001c0001t0047g0222 a0001c0001t0047g0222	1	248	0.0040	-26	c.199 others(45): Show c.1999-9900_1999-9875delATATGTATGTATATATGTATATATAT	TTBK2	ENSG00000128881.18	transcript	ENST00000267890.11	protein_coding	13/14			chr15	TogoVar
TTBK2_chr15_42733730_42925778	42763180	ATATATAT others(19): Show ATATATATATATATTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02895.hp1 HG02895.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0198 a0001c0001t0002g0198	1	248	0.0040	-26	c.199 others(45): Show c.1999-9959_1999-9934delAAAAAAAAAAAAAATATATATATATA	TTBK2	ENSG00000128881.18	transcript	ENST00000267890.11	protein_coding	13/14			chr15	TogoVar
TTC17_chr11_43353920_43499931	43397901	CGTGTGTG others(19): Show CGTGTGTGTGTGTGTGTGTGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG03540.hp2 HG03540.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0226 a0002c0003t0001g0226	1	298	0.0034	-26	c.919 others(39): Show c.919-48_919-23delGTGTGTGTGTGTGTGTGTGTGTGTGT	TTC17	ENSG00000052841.16	transcript	ENST00000039989.9	protein_coding	7/23		INFO_REALIGN_3_PRIME	chr11	TogoVar
TTC17_chr11_43353920_43499931	43434168	GACACACA others(19): Show GACACACACACACACACACACACACAC	G G	intron_variant intron_variant	MODIFIER	HG01257.hp1 HG01361.hp2 HG02622.hp2 others(2): Show HG01257.hp1 HG01361.hp2 HG02622.hp2 HG02897.hp2 HG03195.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0008 others(1): Show a0001c0001 a0001c0002 a0001c0008 a0002c0003	a0001c0001t0001 a0001c0002t0001 a0001c0008t0006 others(1): Show a0001c0001t0001 a0001c0002t0001 a0001c0008t0006 a0002c0003t0002	a0001c0001t0001g0137 a0001c0002t0001g0198 a0001c0002t0001g0199 others(2): Show a0001c0001t0001g0137 a0001c0002t0001g0198 a0001c0002t0001g0199 a0001c0008t0006g0064 a0002c0003t0002g0051	5	298	0.0168	-26	c.225 others(45): Show c.2252-9118_2252-9093delACACACACACACACACACACACACAC	TTC17	ENSG00000052841.16	transcript	ENST00000039989.9	protein_coding	16/23		INFO_REALIGN_3_PRIME	chr11	TogoVar
TTC1_chr5_160004139_160070543	160045454	CCACACAC others(19): Show CCACACACACACACACACACACACACA	C C	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00438.hp2 HG00609.hp2 others(30): Show HG00423.hp2 HG00438.hp2 HG00609.hp2 HG01175.hp2 HG01433.hp1 HG01934.hp1 HG02040.hp2 HG02132.hp1 HG02135.hp2 HG02273.hp2 HG02486.hp2 HG03654.hp1 HG06807.hp1 NA18944.hp1 NA18946.hp2 NA18955.hp2 NA18959.hp2 NA18960.hp1 NA18961.hp2 NA18963.hp2 NA18965.hp2 NA18975.hp1 NA18994.hp1 NA18995.hp2 NA19000.hp1 NA19010.hp1 NA19060.hp2 NA19074.hp1 NA19076.hp2 NA19081.hp1 NA19082.hp1 NA19083.hp1 NA19240.hp1	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0002c0002 a0005c0005 a0001c0001 a0002c0002 a0005c0005	a0001c0001t0001 a0001c0001t0004 a0002c0002t0001 others(1): Show a0001c0001t0001 a0001c0001t0004 a0002c0002t0001 a0005c0005t0001	a0001c0001t0001g0002 a0001c0001t0001g0185 a0001c0001t0001g0253 others(28): Show a0001c0001t0001g0002 a0001c0001t0001g0185 a0001c0001t0001g0253 a0001c0001t0001g0260 a0001c0001t0001g0261 a0001c0001t0001g0263 a0001c0001t0001g0264 a0001c0001t0001g0265 a0001c0001t0001g0266 a0001c0001t0001g0267 a0001c0001t0001g0268 a0001c0001t0001g0269 a0001c0001t0001g0270 a0001c0001t0001g0272 a0001c0001t0001g0273 a0001c0001t0001g0274 a0001c0001t0001g0275 a0001c0001t0001g0276 a0001c0001t0001g0277 a0001c0001t0001g0278 a0001c0001t0001g0279 a0001c0001t0001g0280 a0001c0001t0001g0281 a0001c0001t0001g0282 a0001c0001t0001g0289 a0001c0001t0001g0291 a0001c0001t0001g0292 a0001c0001t0001g0293 a0001c0001t0004g0262 a0002c0002t0001g0012 a0005c0005t0001g0013	33	384	0.0859	-26	c.541 others(43): Show c.541+2320_541+2345delCACACACACACACACACACACACACA	TTC1	ENSG00000113312.12	transcript	ENST00000231238.10	protein_coding	5/7		INFO_REALIGN_3_PRIME	chr5	TogoVar
TTC1_chr5_160004139_160070543	160045496	ACACACAC others(19): Show ACACACACACACACACACATACACACT	A A	intron_variant intron_variant	MODIFIER	HG02129.hp1 HG02129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0304 a0001c0001t0002g0304	1	384	0.0026	-26	c.541 others(43): Show c.541+2329_541+2354delACACACACACACACACATACACACTC	TTC1	ENSG00000113312.12	transcript	ENST00000231238.10	protein_coding	5/7		INFO_REALIGN_3_PRIME	chr5	TogoVar
TTC21B_chr2_165868362_165958776	165927046	GTATATAT others(19): Show GTATATATATATATCCTAGTAGATATA	G G	intron_variant intron_variant	MODIFIER	HG01168.hp2 HG01192.hp2 HG02615.hp1 others(5): Show HG01168.hp2 HG01192.hp2 HG02615.hp1 HG03017.hp1 HG03225.hp2 HG03540.hp1 NA18970.hp1 NA21309.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0004c0010 a0001c0001 a0004c0010	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0004c0010t0003 a0004c0010t0018	a0001c0001t0001g0287 a0001c0001t0001g0288 a0001c0001t0001g0289 others(5): Show a0001c0001t0001g0287 a0001c0001t0001g0288 a0001c0001t0001g0289 a0001c0001t0002g0268 a0001c0001t0003g0159 a0001c0001t0003g0175 a0004c0010t0003g0390 a0004c0010t0018g0383	8	408	0.0196	-26	c.138 others(45): Show c.1386+2063_1386+2088delTATATCTACTAGGATATATATATATA	TTC21B	ENSG00000123607.16	transcript	ENST00000243344.8	protein_coding	11/28			chr2	TogoVar
TTC21B_chr2_165868362_165958776	165927270	TTATATAT others(19): Show TTATATATATATATATCCTAGTAGTTA	T T	intron_variant intron_variant	MODIFIER	HG03540.hp1 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0175 a0001c0001t0003g0175	1	408	0.0025	-26	c.138 others(45): Show c.1386+1839_1386+1864delTAACTACTAGGATATATATATATATA	TTC21B	ENSG00000123607.16	transcript	ENST00000243344.8	protein_coding	11/28			chr2	TogoVar
TTC21B_chr2_165868362_165958776	165927282	ATATCCTA others(19): Show ATATCCTAGTAGTTATATATATATATT	A A	intron_variant intron_variant	MODIFIER	NA18970.hp1 NA18970.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0268 a0001c0001t0002g0268	1	408	0.0025	-26	c.138 others(45): Show c.1386+1827_1386+1852delAATATATATATATAACTACTAGGATA	TTC21B	ENSG00000123607.16	transcript	ENST00000243344.8	protein_coding	11/28			chr2	TogoVar
TTC23L_chr5_34834164_34905511	34846657	ATATGTGT others(19): Show ATATGTGTGTATGTGTGTGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00438.hp1 HG00741.hp2 others(10): Show HG00323.hp2 HG00438.hp1 HG00741.hp2 HG01081.hp1 HG02523.hp1 HG02698.hp2 HG03669.hp1 HG03831.hp2 HG03927.hp1 HG03942.hp1 HG03942.hp2 HG04184.hp2 NA18944.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0002c0007 a0001c0001 a0002c0002 a0002c0007	a0001c0001t0001 a0001c0001t0002 a0002c0002t0001 others(2): Show a0001c0001t0001 a0001c0001t0002 a0002c0002t0001 a0002c0002t0002 a0002c0007t0001	a0001c0001t0001g0135 a0001c0001t0002g0166 a0002c0002t0001g0030 others(10): Show a0001c0001t0001g0135 a0001c0001t0002g0166 a0002c0002t0001g0030 a0002c0002t0001g0031 a0002c0002t0001g0036 a0002c0002t0001g0038 a0002c0002t0001g0041 a0002c0002t0002g0034 a0002c0002t0002g0035 a0002c0002t0002g0037 a0002c0007t0001g0032 a0002c0007t0001g0033 a0002c0007t0001g0039	13	392	0.0332	-26	c.255 others(42): Show c.255+986_255+1011delATGTGTGTATGTGTGTGTGTGTGTGT	TTC23L	ENSG00000205838.15	transcript	ENST00000505624.6	protein_coding	3/10		INFO_REALIGN_3_PRIME	chr5	TogoVar
TTC27_chr2_32623050_32826051	32681978	ATATGTGT others(19): Show ATATGTGTGTGTGTGTGTGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	NA18943.hp1 NA18943.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0157 a0001c0001t0001g0157	1	324	0.0031	-26	c.111 others(45): Show c.1119+3058_1119+3083delATGTGTGTGTGTGTGTGTGTGTGTGT	TTC27	ENSG00000018699.13	transcript	ENST00000317907.9	protein_coding	9/19		INFO_REALIGN_3_PRIME	chr2	TogoVar

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