view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
CNTN1_chr12_40687439_41077415 | 40830791 | GTATATAT others(19): Show |
G | intron_variant | MODIFIER | HG01884.hp1 HG03041.hp1 HG03098.hp2 others(1): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0004a0001c0004t0003a0001c0004t0007 | a0001c0001t0004g0168 a0001c0004t0003g0166 a0001c0004t0003g0169 others(1): Show |
4 | 65 | 0.0615 | -26 | c.-76 others(45): Show |
CNTN1 | ENSG00000018236.15 | transcript | ENST00000551295.7 | protein_coding | 1/23 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
CNTN1_chr12_40687439_41077415 | 41056918 | AATATTTA others(19): Show |
A | intron_variant | MODIFIER | HG03139.hp2 | a0001 | a0001c0012 | a0001c0012t0021 | a0001c0012t0021g0203 | 1 | 228 | 0.0044 | -26 | c.298 others(47): Show |
CNTN1 | ENSG00000018236.15 | transcript | ENST00000551295.7 | protein_coding | 23/23 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
CNTN3_chr3_74257568_74619659 | 74285790 | GATATATA others(19): Show |
G | intron_variant | MODIFIER | HG02257.hp2 HG02622.hp1 HG03041.hp2 others(4): Show |
a0001a0008 | a0001c0001a0001c0002a0008c0022 | a0001c0001t0002a0001c0001t0009a0001c0001t0014others(4): Show | a0001c0001t0002g0079 a0001c0001t0009g0083 a0001c0001t0014g0011 others(4): Show |
7 | 50 | 0.1400 | -26 | c.251 others(43): Show |
CNTN3 | ENSG00000113805.9 | transcript | ENST00000263665.7 | protein_coding | 19/22 | chr3 | TogoVar | |||||||
CNTN3_chr3_74257568_74619659 | 74344396 | GGTTTTTT others(19): Show |
G | intron_variant | MODIFIER | HG02258.hp2 HG02280.hp1 HG02897.hp2 others(3): Show |
a0001a0003 | a0001c0001a0001c0002a0001c0019others(2): Show | a0001c0001t0004a0001c0001t0025a0001c0002t0003others(3): Show | a0001c0001t0004g0138 a0001c0001t0025g0095 a0001c0002t0003g0013 others(3): Show |
6 | 57 | 0.1053 | -26 | c.136 others(45): Show |
CNTN3 | ENSG00000113805.9 | transcript | ENST00000263665.7 | protein_coding | 11/22 | chr3 | TogoVar | |||||||
CNTN4_chr3_2093866_3062959 | 2549089 | GTTTCTAA others(19): Show |
G | intron_variant | MODIFIER | HG00738.hp2 HG01261.hp1 HG02602.hp2 others(1): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0005a0001c0002t0001a0001c0003t0001others(1): Show | a0001c0001t0005g0054 a0001c0002t0001g0029 a0001c0003t0001g0028 others(1): Show |
4 | 116 | 0.0345 | -26 | c.-88 others(45): Show |
CNTN4 | ENSG00000144619.15 | transcript | ENST00000418658.6 | protein_coding | 3/24 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
CNTN5_chr11_99015949_100363885 | 99284600 | GGTGTGTG others(19): Show |
G | intron_variant | MODIFIER | HG01099.hp1 NA18939.hp2 NA18957.hp2 others(1): Show |
a0001a0003a0005others(1): Show | a0001c0001a0003c0003a0005c0004others(1): Show | a0001c0001t0004a0003c0003t0002a0005c0004t0002others(1): Show | a0001c0001t0004g0011 a0003c0003t0002g0002 a0005c0004t0002g0001 others(1): Show |
4 | 6 | 0.6667 | -26 | c.-20 others(47): Show |
CNTN5 | ENSG00000149972.12 | transcript | ENST00000524871.6 | protein_coding | 1/24 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
CNTN5_chr11_99015949_100363885 | 99408428 | AAAAGAAA others(19): Show |
A | intron_variant | MODIFIER | HG01099.hp1 HG02735.hp1 HG03471.hp1 |
a0001a0009 | a0001c0001a0009c0008 | a0001c0001t0004a0001c0001t0006a0009c0008t0007 | a0001c0001t0004g0011 a0001c0001t0006g0032 a0009c0008t0007g0038 |
3 | 58 | 0.0517 | -26 | c.-71 others(45): Show |
CNTN5 | ENSG00000149972.12 | transcript | ENST00000524871.6 | protein_coding | 2/24 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
CNTN5_chr11_99015949_100363885 | 99812995 | CTGGTAAA others(19): Show |
C | intron_variant | MODIFIER | HG00733.hp2 HG00738.hp1 HG00738.hp2 others(7): Show |
a0002a0005a0009 | a0002c0002a0005c0004a0009c0008 | a0002c0002t0001a0002c0002t0003a0002c0002t0004others(6): Show | a0002c0002t0001g0003 a0002c0002t0003g0036 a0002c0002t0003g0037 others(7): Show |
10 | 66 | 0.1515 | -26 | c.56- others(41): Show |
CNTN5 | ENSG00000149972.12 | transcript | ENST00000524871.6 | protein_coding | 3/24 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
CNTN5_chr11_99015949_100363885 | 99889291 | GGTGTGTG others(19): Show |
G | intron_variant | MODIFIER | HG01123.hp2 HG02132.hp1 NA18939.hp2 others(1): Show |
a0001a0003a0010 | a0001c0001a0003c0003a0010c0007 | a0001c0001t0014a0001c0001t0016a0003c0003t0002others(1): Show | a0001c0001t0014g0016 a0001c0001t0016g0049 a0003c0003t0002g0015 others(1): Show |
4 | 10 | 0.4000 | -26 | c.578 others(45): Show |
CNTN5 | ENSG00000149972.12 | transcript | ENST00000524871.6 | protein_coding | 6/24 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
CNTN6_chr3_1088024_1409217 | 1098781 | CACACACA others(19): Show |
C | intron_variant | MODIFIER | HG02723.hp2 | a0001 | a0001c0005 | a0001c0005t0001 | a0001c0005t0001g0203 | 1 | 229 | 0.0044 | -26 | c.-83 others(43): Show |
CNTN6 | ENSG00000134115.13 | transcript | ENST00000446702.7 | protein_coding | 1/22 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
CNTN6_chr3_1088024_1409217 | 1300579 | AAGAAAGA others(19): Show |
A | intron_variant | MODIFIER | HG02145.hp1 HG02145.hp2 HG02451.hp1 others(3): Show |
a0001a0004 | a0001c0005a0001c0006a0004c0016 | a0001c0005t0001a0001c0005t0004a0001c0006t0001others(2): Show | a0001c0005t0001g0193 a0001c0005t0004g0194 a0001c0006t0001g0184 others(3): Show |
6 | 230 | 0.0261 | -26 | c.761 others(43): Show |
CNTN6 | ENSG00000134115.13 | transcript | ENST00000446702.7 | protein_coding | 7/22 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
CNTNAP2_chr7_146111801_148425998 | 146151682 | GTATATAT others(19): Show |
G | intron_variant | MODIFIER | HG02717.hp2 | a0001 | a0001c0005 | a0001c0005t0008 | a0001c0005t0008g0005 | 1 | 36 | 0.0278 | -26 | c.97+ others(43): Show |
CNTNAP2 | ENSG00000174469.23 | transcript | ENST00000361727.8 | protein_coding | 1/23 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
CNTNAP2_chr7_146111801_148425998 | 146395805 | ATAGATAG others(19): Show |
A | intron_variant | MODIFIER | HG03225.hp1 | a0001 | a0001c0009 | a0001c0009t0019 | a0001c0009t0019g0027 | 1 | 40 | 0.0250 | -26 | c.97+ others(45): Show |
CNTNAP2 | ENSG00000174469.23 | transcript | ENST00000361727.8 | protein_coding | 1/23 | chr7 | TogoVar | |||||||
CNTNAP2_chr7_146111801_148425998 | 146457481 | AATATATA others(19): Show |
A | intron_variant | MODIFIER | HG02717.hp1 HG03225.hp2 NA18522.hp1 |
a0001a0002 | a0001c0013a0001c0018a0002c0017 | a0001c0013t0003a0001c0018t0002a0002c0017t0015 | a0001c0013t0003g0039 a0001c0018t0002g0012 a0002c0017t0015g0037 |
3 | 4 | 0.7500 | -26 | c.98- others(45): Show |
CNTNAP2 | ENSG00000174469.23 | transcript | ENST00000361727.8 | protein_coding | 1/23 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
CNTNAP2_chr7_146111801_148425998 | 146483282 | AATATATA others(19): Show |
A | intron_variant | MODIFIER | HG02717.hp1 HG03225.hp2 |
a0001a0002 | a0001c0018a0002c0017 | a0001c0018t0002a0002c0017t0015 | a0001c0018t0002g0012 a0002c0017t0015g0037 |
2 | 29 | 0.0690 | -26 | c.98- others(45): Show |
CNTNAP2 | ENSG00000174469.23 | transcript | ENST00000361727.8 | protein_coding | 1/23 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
CNTNAP2_chr7_146111801_148425998 | 146759681 | CAAAAAAA others(19): Show |
C | intron_variant | MODIFIER | HG02451.hp2 HG02630.hp1 HG02717.hp1 others(11): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0002t0001others(10): Show | a0001c0001t0001g0003 a0001c0001t0002g0006 a0001c0002t0001g0008 others(11): Show |
14 | 19 | 0.7368 | -26 | c.98- others(43): Show |
CNTNAP2 | ENSG00000174469.23 | transcript | ENST00000361727.8 | protein_coding | 1/23 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
CNTNAP2_chr7_146111801_148425998 | 146947553 | GTGTGTAT others(19): Show |
G | intron_variant | MODIFIER | HG02976.hp2 | a0001 | a0001c0003 | a0001c0003t0020 | a0001c0003t0020g0017 | 1 | 34 | 0.0294 | -26 | c.403 others(45): Show |
CNTNAP2 | ENSG00000174469.23 | transcript | ENST00000361727.8 | protein_coding | 3/23 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
CNTNAP2_chr7_146111801_148425998 | 147104873 | CATATATA others(19): Show |
C | intron_variant | MODIFIER | HG01891.hp2 HG02922.hp2 HG03139.hp2 others(2): Show |
a0001a0005 | a0001c0001a0001c0004a0001c0011others(1): Show | a0001c0001t0001a0001c0001t0006a0001c0004t0005others(2): Show | a0001c0001t0001g0038 a0001c0001t0006g0009 a0001c0004t0005g0004 others(2): Show |
5 | 12 | 0.4167 | -26 | c.551 others(43): Show |
CNTNAP2 | ENSG00000174469.23 | transcript | ENST00000361727.8 | protein_coding | 4/23 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
CNTNAP2_chr7_146111801_148425998 | 147301592 | CTGTGTGT others(19): Show |
C | intron_variant | MODIFIER | NA20129.hp1 | a0001 | a0001c0006 | a0001c0006t0009 | a0001c0006t0009g0028 | 1 | 10 | 0.1000 | -26 | c.149 others(45): Show |
CNTNAP2 | ENSG00000174469.23 | transcript | ENST00000361727.8 | protein_coding | 9/23 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
CNTNAP2_chr7_146111801_148425998 | 147775312 | TATATATA others(19): Show |
T | intron_variant | MODIFIER | HG02976.hp2 | a0001 | a0001c0003 | a0001c0003t0020 | a0001c0003t0020g0017 | 1 | 40 | 0.0250 | -26 | c.209 others(49): Show |
CNTNAP2 | ENSG00000174469.23 | transcript | ENST00000361727.8 | protein_coding | 13/23 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
CNTNAP2_chr7_146111801_148425998 | 147784494 | AATATATA others(19): Show |
A | intron_variant | MODIFIER | HG02451.hp1 HG03139.hp2 |
a0001 | a0001c0002a0001c0011 | a0001c0002t0001a0001c0011t0016 | a0001c0002t0001g0007 a0001c0011t0016g0019 |
2 | 5 | 0.4000 | -26 | c.209 others(49): Show |
CNTNAP2 | ENSG00000174469.23 | transcript | ENST00000361727.8 | protein_coding | 13/23 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
CNTNAP2_chr7_146111801_148425998 | 147902788 | GTGTGTGT others(19): Show |
G | intron_variant | MODIFIER | HG02922.hp1 HG03540.hp2 NA18522.hp1 |
a0001 | a0001c0001a0001c0003a0001c0013 | a0001c0001t0012a0001c0003t0004a0001c0013t0003 | a0001c0001t0012g0034 a0001c0003t0004g0029 a0001c0013t0003g0039 |
3 | 40 | 0.0750 | -26 | c.209 others(43): Show |
CNTNAP2 | ENSG00000174469.23 | transcript | ENST00000361727.8 | protein_coding | 13/23 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
CNTNAP3_chr9_39059710_39293167 | 39217358 | GTATATAT others(19): Show |
G | intron_variant | MODIFIER | HG02109.hp2 | a0003 | a0003c0001 | a0003c0001t0002 | a0003c0001t0002g0004 | 1 | 2 | 0.5000 | -26 | c.390 others(45): Show |
CNTNAP3 | ENSG00000106714.18 | transcript | ENST00000297668.11 | protein_coding | 3/23 | chr9 | TogoVar | |||||||
CNTNAP4_chr16_76272401_76565757 | 76376907 | TTGTGTGT others(19): Show |
T | intron_variant | MODIFIER | NA19012.hp2 | a0002 | a0002c0005 | a0002c0005t0004 | a0002c0005t0004g0173 | 1 | 37 | 0.0270 | -26 | c.390 others(45): Show |
CNTNAP4 | ENSG00000152910.19 | transcript | ENST00000611870.5 | protein_coding | 3/23 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
CNTNAP4_chr16_76272401_76565757 | 76397938 | TTATATAC others(19): Show |
T | intron_variant | MODIFIER | HG00438.hp1 HG00597.hp1 HG00741.hp1 others(20): Show |
a0001a0002a0004others(4): Show | a0001c0001a0001c0004a0002c0002others(5): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0012others(10): Show | a0001c0001t0001g0062 a0001c0001t0001g0076 a0001c0001t0001g0119 others(20): Show |
23 | 95 | 0.2421 | -26 | c.391 others(45): Show |
CNTNAP4 | ENSG00000152910.19 | transcript | ENST00000611870.5 | protein_coding | 3/23 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
CNTNAP4_chr16_76272401_76565757 | 76522686 | CCTTTCTT others(19): Show |
C | intron_variant | MODIFIER | HG03710.hp1 | a0002 | a0002c0005 | a0002c0005t0002 | a0002c0005t0002g0070 | 1 | 141 | 0.0071 | -26 | c.275 others(43): Show |
CNTNAP4 | ENSG00000152910.19 | transcript | ENST00000611870.5 | protein_coding | 17/23 | chr16 | TogoVar | |||||||
CNTNAP5_chr2_124020287_124926219 | 124431547 | TATTATAT others(19): Show |
T | intron_variant | MODIFIER | HG02257.hp2 HG02451.hp2 HG02970.hp2 others(1): Show |
a0001a0005 | a0001c0001a0001c0002a0005c0003 | a0001c0001t0005a0001c0001t0013a0001c0002t0007others(1): Show | a0001c0001t0005g0041 a0001c0001t0013g0042 a0001c0002t0007g0028 others(1): Show |
4 | 40 | 0.1000 | -26 | c.530 others(43): Show |
CNTNAP5 | ENSG00000155052.15 | transcript | ENST00000682447.1 | protein_coding | 4/23 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
CNTNAP5_chr2_124020287_124926219 | 124702346 | CTTTTTTT others(19): Show |
C | intron_variant | MODIFIER | HG01069.hp2 HG02451.hp2 HG02886.hp1 others(4): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0003a0001c0001t0009others(3): Show | a0001c0001t0001g0011 a0001c0001t0001g0026 a0001c0001t0003g0006 others(4): Show |
7 | 9 | 0.7778 | -26 | c.207 others(47): Show |
CNTNAP5 | ENSG00000155052.15 | transcript | ENST00000682447.1 | protein_coding | 13/23 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
COBLL1_chr2_164675188_164846823 | 164805315 | CTCTCTCT others(19): Show |
C | intron_variant | MODIFIER | HG00735.hp2 NA18946.hp2 NA18963.hp2 others(2): Show |
a0001a0005 | a0001c0002a0005c0006a0005c0029 | a0001c0002t0001a0005c0006t0001a0005c0029t0016 | a0001c0002t0001g0202 a0005c0006t0001g0002 a0005c0006t0001g0204 others(1): Show |
5 | 197 | 0.0254 | -26 | c.41+ others(43): Show |
COBLL1 | ENSG00000082438.18 | transcript | ENST00000652658.2 | protein_coding | 2/13 | chr2 | TogoVar | |||||||
COBLL1_chr2_164675188_164846823 | 164805317 | CTCTCTCT others(19): Show |
C | intron_variant | MODIFIER | HG03710.hp1 | a0020 | a0020c0028 | a0020c0028t0016 | a0020c0028t0016g0205 | 1 | 196 | 0.0051 | -26 | c.41+ others(43): Show |
COBLL1 | ENSG00000082438.18 | transcript | ENST00000652658.2 | protein_coding | 2/13 | chr2 | TogoVar | |||||||
COBLL1_chr2_164675188_164846823 | 164818272 | GTATGTAT others(19): Show |
G | intron_variant | MODIFIER | HG00099.hp2 HG01361.hp2 HG01884.hp1 |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0001a0002c0003t0003 | a0001c0001t0001g0087 a0002c0003t0003g0085 a0002c0003t0003g0086 |
3 | 178 | 0.0169 | -26 | c.41+ others(43): Show |
COBLL1 | ENSG00000082438.18 | transcript | ENST00000652658.2 | protein_coding | 2/13 | chr2 | TogoVar | |||||||
COBLL1_chr2_164675188_164846823 | 164822726 | ATTATATT others(19): Show |
A | intron_variant | MODIFIER | HG02886.hp1 | a0001 | a0001c0002 | a0001c0002t0011 | a0001c0002t0011g0186 | 1 | 164 | 0.0061 | -26 | c.41+ others(43): Show |
COBLL1 | ENSG00000082438.18 | transcript | ENST00000652658.2 | protein_coding | 2/13 | chr2 | TogoVar | |||||||
COBL_chr7_51011212_51321809 | 51108932 | ACACACAC others(19): Show |
A | intron_variant | MODIFIER | HG02922.hp1 | a0002 | a0002c0004 | a0002c0004t0007 | a0002c0004t0007g0017 | 1 | 228 | 0.0044 | -26 | c.958 others(45): Show |
COBL | ENSG00000106078.19 | transcript | ENST00000265136.12 | protein_coding | 6/12 | chr7 | TogoVar | |||||||
COG1_chr17_73188055_73213507 | 73192830 | CCGCGCCC others(19): Show |
C | upstream_gene_variant | MODIFIER | HG02109.hp1 HG02896.hp1 HG03471.hp1 others(8): Show |
a0002 | a0002c0001a0002c0006 | a0002c0001t0001a0002c0006t0001 | a0002c0001t0001g0004 a0002c0001t0001g0007 a0002c0001t0001g0010 others(3): Show |
11 | 408 | 0.0270 | -26 | c.-23 others(35): Show |
COG1 | ENSG00000166685.13 | transcript | ENST00000299886.9 | protein_coding | 224 | chr17 | TogoVar | |||||||
COG3_chr13_45459939_45541701 | 45513348 | TATATAAT others(19): Show |
T | intron_variant | MODIFIER | HG00280.hp1 HG00597.hp1 HG00642.hp1 others(8): Show |
a0002 | a0002c0004 | a0002c0004t0001a0002c0004t0010 | a0002c0004t0001g0002 a0002c0004t0001g0011 a0002c0004t0001g0012 others(6): Show |
11 | 328 | 0.0335 | -26 | c.180 others(45): Show |
COG3 | ENSG00000136152.15 | transcript | ENST00000349995.10 | protein_coding | 16/22 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | ||||||
COL11A1_chr1_102871473_103113522 | 103027396 | AATATATA others(19): Show |
A | intron_variant | MODIFIER | HG01109.hp1 HG01884.hp2 HG02257.hp2 others(15): Show |
a0001a0003a0004others(1): Show | a0001c0008a0001c0009a0003c0026others(2): Show | a0001c0008t0006a0001c0009t0001a0001c0009t0007others(3): Show | a0001c0008t0006g0001 a0001c0008t0006g0002 a0001c0008t0006g0003 others(15): Show |
18 | 33 | 0.5455 | -26 | c.781 others(43): Show |
COL11A1 | ENSG00000060718.22 | transcript | ENST00000370096.9 | protein_coding | 5/66 | chr1 | TogoVar | |||||||
COL14A1_chr8_120120102_120378573 | 120166875 | AGTGTGTG others(19): Show |
A | intron_variant | MODIFIER | HG00438.hp2 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0179 | 1 | 42 | 0.0238 | -26 | c.350 others(43): Show |
COL14A1 | ENSG00000187955.13 | transcript | ENST00000297848.8 | protein_coding | 4/47 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
COL19A1_chr6_69861556_70217468 | 69921722 | ATATATTC others(19): Show |
A | intron_variant | MODIFIER | HG00408.hp2 HG02109.hp2 HG02622.hp1 others(7): Show |
a0001a0002a0009 | a0001c0001a0001c0005a0002c0003others(3): Show | a0001c0001t0006a0001c0005t0007a0002c0003t0018others(5): Show | a0001c0001t0006g0107 a0001c0005t0007g0182 a0002c0003t0018g0138 others(7): Show |
10 | 180 | 0.0556 | -26 | c.267 others(43): Show |
COL19A1 | ENSG00000082293.13 | transcript | ENST00000620364.5 | protein_coding | 4/50 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | ||||||
COL21A1_chr6_56051590_56252580 | 56130165 | TTATATAT others(19): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG00735.hp2 HG01192.hp1 others(10): Show |
a0001a0003 | a0001c0001a0003c0005a0003c0006 | a0001c0001t0014a0003c0005t0007a0003c0005t0014others(1): Show | a0001c0001t0014g0087 a0003c0005t0007g0119 a0003c0005t0007g0121 others(10): Show |
13 | 141 | 0.0922 | -26 | c.154 others(45): Show |
COL21A1 | ENSG00000124749.18 | transcript | ENST00000244728.10 | protein_coding | 12/29 | chr6 | TogoVar | |||||||
COL21A1_chr6_56051590_56252580 | 56130186 | TATATATA others(19): Show |
T | intron_variant | MODIFIER | HG06807.hp2 NA18979.hp1 NA19074.hp1 |
a0001a0011 | a0001c0001a0011c0021 | a0001c0001t0001a0011c0021t0020 | a0001c0001t0001g0162 a0001c0001t0001g0215 a0011c0021t0020g0095 |
3 | 262 | 0.0115 | -26 | c.154 others(45): Show |
COL21A1 | ENSG00000124749.18 | transcript | ENST00000244728.10 | protein_coding | 12/29 | chr6 | TogoVar | |||||||
COL21A1_chr6_56051590_56252580 | 56206693 | AATAAATA others(19): Show |
A | intron_variant | MODIFIER | HG00741.hp1 HG01167.hp2 HG01169.hp2 others(3): Show |
a0001a0010 | a0001c0007a0001c0024a0010c0023 | a0001c0007t0002a0001c0007t0004a0001c0024t0022others(1): Show | a0001c0007t0002g0260 a0001c0007t0002g0261 a0001c0007t0004g0065 others(3): Show |
6 | 57 | 0.1053 | -26 | c.-38 others(45): Show |
COL21A1 | ENSG00000124749.18 | transcript | ENST00000244728.10 | protein_coding | 1/29 | chr6 | TogoVar | |||||||
COL21A1_chr6_56051590_56252580 | 56211163 | GTATATGT others(19): Show |
G | intron_variant | MODIFIER | HG01071.hp1 HG01346.hp1 HG01346.hp2 others(2): Show |
a0001a0006a0009 | a0001c0001a0001c0002a0006c0011others(1): Show | a0001c0001t0003a0001c0002t0002a0006c0011t0004others(1): Show | a0001c0001t0003g0092 a0001c0002t0002g0196 a0006c0011t0004g0090 others(2): Show |
5 | 262 | 0.0191 | -26 | c.-38 others(45): Show |
COL21A1 | ENSG00000124749.18 | transcript | ENST00000244728.10 | protein_coding | 1/29 | chr6 | TogoVar | |||||||
COL22A1_chr8_138583235_138919041 | 138625325 | TCAAAAAA others(19): Show |
T | intron_variant | MODIFIER | HG03710.hp2 | a0002 | a0002c0004 | a0002c0004t0001 | a0002c0004t0001g0123 | 1 | 156 | 0.0064 | -26 | c.371 others(43): Show |
COL22A1 | ENSG00000169436.18 | transcript | ENST00000303045.11 | protein_coding | 51/64 | chr8 | TogoVar | |||||||
COL22A1_chr8_138583235_138919041 | 138664209 | GCACACAC others(19): Show |
G | intron_variant | MODIFIER | HG03486.hp1 | a0001 | a0001c0008 | a0001c0008t0002 | a0001c0008t0002g0088 | 1 | 90 | 0.0111 | -26 | c.315 others(43): Show |
COL22A1 | ENSG00000169436.18 | transcript | ENST00000303045.11 | protein_coding | 41/64 | chr8 | TogoVar | |||||||
COL22A1_chr8_138583235_138919041 | 138865776 | AGTGTATG others(19): Show |
A | intron_variant | MODIFIER | HG03139.hp1 NA18944.hp1 |
a0001a0002 | a0001c0056a0002c0007 | a0001c0056t0004a0002c0007t0001 | a0001c0056t0004g0040 a0002c0007t0001g0082 |
2 | 156 | 0.0128 | -26 | c.658 others(45): Show |
COL22A1 | ENSG00000169436.18 | transcript | ENST00000303045.11 | protein_coding | 3/64 | chr8 | TogoVar | |||||||
COL23A1_chr5_178232618_178595393 | 178498205 | AATATATA others(19): Show |
A | intron_variant | MODIFIER | HG01358.hp1 HG03209.hp2 |
a0002 | a0002c0002a0002c0003 | a0002c0002t0001a0002c0003t0008 | a0002c0002t0001g0040 a0002c0003t0008g0231 |
2 | 36 | 0.0556 | -26 | c.361 others(45): Show |
COL23A1 | ENSG00000050767.18 | transcript | ENST00000390654.8 | protein_coding | 2/28 | chr5 | TogoVar | |||||||
COL23A1_chr5_178232618_178595393 | 178547189 | CCCGACAG others(19): Show |
C | intron_variant | MODIFIER | NA18955.hp1 | a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0147 | 1 | 236 | 0.0042 | -26 | c.361 others(45): Show |
COL23A1 | ENSG00000050767.18 | transcript | ENST00000390654.8 | protein_coding | 2/28 | chr5 | TogoVar | |||||||
COL25A1_chr4_108803725_109307658 | 109254469 | TTATATAT others(19): Show |
T | intron_variant | MODIFIER | HG01243.hp1 HG02922.hp1 NA19030.hp2 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0002t0001 | a0001c0001t0001g0119 a0001c0001t0002g0118 a0001c0002t0001g0052 |
3 | 39 | 0.0769 | -26 | c.367 others(45): Show |
COL25A1 | ENSG00000188517.17 | transcript | ENST00000399132.6 | protein_coding | 3/37 | chr4 | TogoVar | |||||||
COL25A1_chr4_108803725_109307658 | 109254481 | ATATATAT others(19): Show |
A | intron_variant | MODIFIER | HG00741.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0092 | 1 | 130 | 0.0077 | -26 | c.367 others(45): Show |
COL25A1 | ENSG00000188517.17 | transcript | ENST00000399132.6 | protein_coding | 3/37 | chr4 | TogoVar | |||||||
COL26A1_chr7_101357875_101564024 | 101489711 | TTCATTCT others(19): Show |
T | intron_variant | MODIFIER | HG02897.hp2 | a0006 | a0006c0019 | a0006c0019t0028 | a0006c0019t0028g0141 | 1 | 115 | 0.0087 | -26 | c.385 others(45): Show |
COL26A1 | ENSG00000160963.14 | transcript | ENST00000313669.12 | protein_coding | 3/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar |