Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CTNNA2_chr2_79508051_80653780	80596279	GTTTTTTT others(19): Show GTTTTTTTTTTTTTTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02145.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	68	0.0147	-26	c.218 others(45): Show c.2189+6817_2189+6842delTTTTTTTTTTTTTTTTTTTTTTTTTT	CTNNA2	ENSG00000066032.19	transcript	ENST00000402739.9	protein_coding	15/18		INFO_REALIGN_3_PRIME	chr2	TogoVar
CTNNA3_chr10_65907523_67701195	66346230	TATATATA others(19): Show TATATATATATATATATAGAGAGAGAG	T T	intron_variant intron_variant	MODIFIER	HG02895.hp1 HG06807.hp1 NA18960.hp2 others(2): Show HG02895.hp1 HG06807.hp1 NA18960.hp2 NA18964.hp1 NA19080.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0002c0002 a0004c0008 a0001c0001 a0002c0002 a0004c0008	a0001c0001t0004 a0001c0001t0009 a0002c0002t0003 others(2): Show a0001c0001t0004 a0001c0001t0009 a0002c0002t0003 a0002c0002t0017 a0004c0008t0005	a0001c0001t0004g0041 a0001c0001t0009g0031 a0002c0002t0003g0042 others(2): Show a0001c0001t0004g0041 a0001c0001t0009g0031 a0002c0002t0003g0042 a0002c0002t0017g0040 a0004c0008t0005g0033	5	46	0.1087	-26	c.173 others(47): Show c.1732+32896_1732+32921delCTCTCTCTCTATATATATATATAT AT	CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	12/17			chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66346232	TATATATA others(19): Show TATATATATATATATAGAGAGAGAGAG	T T	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG02818.hp2 HG02717.hp1 HG02818.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0006 a0001c0004t0007 a0001c0001t0006 a0001c0004t0007	a0001c0001t0006g0027 a0001c0004t0007g0005 a0001c0001t0006g0027 a0001c0004t0007g0005	2	46	0.0435	-26	c.173 others(47): Show c.1732+32894_1732+32919delCTCTCTCTCTCTATATATATATAT AT	CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	12/17			chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66346234	TATATATA others(19): Show TATATATATATATAGAGAGAGAGAGAG	T T	intron_variant intron_variant	MODIFIER	HG02896.hp1 HG02896.hp1	a0001 a0001	a0001c0011 a0001c0011	a0001c0011t0009 a0001c0011t0009	a0001c0011t0009g0017 a0001c0011t0009g0017	1	46	0.0217	-26	c.173 others(47): Show c.1732+32892_1732+32917delCTCTCTCTCTCTCTATATATATAT AT	CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	12/17			chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66543903	GTGTGTGT others(19): Show GTGTGTGTGTATATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG03130.hp2 HG03130.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0026 a0002c0002t0026	a0002c0002t0026g0046 a0002c0002t0026g0046	1	46	0.0217	-26	c.137 others(47): Show c.1375-23156_1375-23131delTATATATATATATATATACACACA CA	CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	10/17			chr10	TogoVar
CTNNA3_chr10_65907523_67701195	66642255	TACACACA others(19): Show TACACACACACACACACACACACAAAC	T T	intron_variant intron_variant	MODIFIER	HG06807.hp2 HG06807.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0039 a0002c0002t0003g0039	1	46	0.0217	-26	c.128 others(47): Show c.1282-20497_1282-20472delGTTTGTGTGTGTGTGTGTGTGTGT GT	CTNNA3	ENSG00000183230.18	transcript	ENST00000433211.7	protein_coding	9/17			chr10	TogoVar
CTNND2_chr5_10966836_11909446	11817402	GAGAGGAG others(19): Show GAGAGGAGGGAGAGAGAGAGAGAGAGA	G G	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG00738.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0023 a0001c0001t0001g0023	1	26	0.0385	-26	c.38- others(43): Show c.38-85156_38-85131delTCTCTCTCTCTCTCTCTCCCTCCTCT	CTNND2	ENSG00000169862.21	transcript	ENST00000304623.13	protein_coding	1/21			chr5	TogoVar
CTNS_chr17_3631760_3668103	3642041	CTGTGTGT others(19): Show CTGTGTGTGTGTGTGTACCCGGGCGTG	C C	intron_variant intron_variant	MODIFIER	HG03492.hp2 HG03492.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0087 a0001c0001t0087	a0001c0001t0087g0177 a0001c0001t0087g0177	1	372	0.0027	-26	c.61+ others(41): Show c.61+1790_61+1815delACCCGGGCGTGTGTGTGTGTGTGTGT	CTNS	ENSG00000040531.16	transcript	ENST00000046640.9	protein_coding	3/11		INFO_REALIGN_3_PRIME	chr17	TogoVar
CTRC_chr1_15433443_15454242	15449256	ATAGCTGG others(19): Show ATAGCTGGTGCTGCCCCTTCCCCTTCT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02293.hp1 HG02293.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0002	1	428	0.0023	-26	c.26 others(37): Show c.2668_*2693delTAGCTGGTGCTGCCCCTTCCCCTTCT	CTRC	ENSG00000162438.12	transcript	ENST00000375949.5	protein_coding		15		chr1	TogoVar
CTSB_chr8_11837524_11873087	11839668	TAAAAAAA others(19): Show TAAAAAAAAAAAAAAAAAAAAAAAAAA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02145.hp1 HG02145.hp1	a0003 a0003	a0003c0012 a0003c0012	a0003c0012t0058 a0003c0012t0058	a0003c0012t0058g0159 a0003c0012t0058g0159	1	438	0.0023	-26	c.54 others(37): Show c.5431_*5456delTTTTTTTTTTTTTTTTTTTTTTTTTT	CTSB	ENSG00000164733.23	transcript	ENST00000353047.11	protein_coding		2855		chr8	TogoVar
CTSB_chr8_11837524_11873087	11849459	ACGATTTG others(19): Show ACGATTTGCCCAACTCAGCTTTTAAAG	A A	intron_variant intron_variant	MODIFIER	NA19086.hp1 NA19086.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0076 a0001c0001t0076	a0001c0001t0076g0119 a0001c0001t0076g0119	1	438	0.0023	-26	c.328 others(41): Show c.328-321_328-296delCTTTAAAAGCTGAGTTGGGCAAATCG	CTSB	ENSG00000164733.23	transcript	ENST00000353047.11	protein_coding	4/9			chr8	TogoVar
CTSB_chr8_11837524_11873087	11850747	CTCAGAAA others(19): Show CTCAGAAAGTTTCTATAACTTGCCTTG	C C	intron_variant intron_variant	MODIFIER	NA19074.hp2 NA19074.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0082 a0002c0002t0001g0082	1	438	0.0023	-26	c.327 others(40): Show c.327+93_327+118delCAAGGCAAGTTATAGAAACTTTCTGA	CTSB	ENSG00000164733.23	transcript	ENST00000353047.11	protein_coding	4/9			chr8	TogoVar
CTSC_chr11_88288592_88342736	88290844	CATATATA others(19): Show CATATATATATATATATATATATATAT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02486.hp2 HG02976.hp1 HG02486.hp2 HG02976.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0177 a0001c0001t0001g0220 a0001c0001t0001g0177 a0001c0001t0001g0220	2	434	0.0046	-26	c.31 others(37): Show c.3136_*3161delATATATATATATATATATATATATAT	CTSC	ENSG00000109861.17	transcript	ENST00000227266.10	protein_coding		2747		chr11	TogoVar
CTSD_chr11_1747755_1768927	1754412	AAGGGATG others(19): Show AAGGGATGGAGGGGCATGGAGGGATGG	A A	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02922.hp1 HG01884.hp2 HG02922.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0125 a0001c0001t0001g0128 a0001c0001t0001g0125 a0001c0001t0001g0128	2	386	0.0052	-26	c.828 others(41): Show c.828-300_828-275delCCATCCCTCCATGCCCCTCCATCCCT	CTSD	ENSG00000117984.15	transcript	ENST00000236671.7	protein_coding	6/8			chr11	TogoVar
CTSL_chr9_87721119_87736469	87734804	CTTTTTTT others(19): Show CTTTTTTTTTTTTTTTTTTTTTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18980.hp2 NA18999.hp2 NA19002.hp1 others(4): Show NA18980.hp2 NA18999.hp2 NA19002.hp1 NA19064.hp1 NA19082.hp2 NA19084.hp2 NA19085.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0002 a0001c0001t0001g0004	7	388	0.0180	-26	c.36 others(37): Show c.3698_*3723delTTTTTTTTTTTTTTTTTTTTTTTTTT	CTSL	ENSG00000135047.16	transcript	ENST00000343150.10	protein_coding		3336		chr9	TogoVar
CUX1_chr7_101811007_102288958	101939058	CATATATA others(19): Show CATATATATATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02818.hp1 HG02896.hp2 others(2): Show HG01884.hp2 HG02818.hp1 HG02896.hp2 HG02897.hp1 HG03540.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0004 a0001c0001 a0001c0002 a0002c0004	a0001c0001t0001 a0001c0002t0001 a0002c0004t0001 a0001c0001t0001 a0001c0002t0001 a0002c0004t0001	a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0084 others(2): Show a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0084 a0001c0002t0001g0020 a0002c0004t0001g0018	5	132	0.0379	-26	c.174 others(45): Show c.174+22864_174+22889delATATATATATATATATATATATATAT	CUX1	ENSG00000257923.12	transcript	ENST00000622516.6	protein_coding	2/22		INFO_REALIGN_3_PRIME	chr7	TogoVar
CUX1_chr7_101811007_102288958	102060586	TATATATA others(19): Show TATATATACACACACACAAATAAACAC	T T	intron_variant intron_variant	MODIFIER	HG02300.hp1 HG03669.hp1 HG03927.hp2 HG02300.hp1 HG03669.hp1 HG03927.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0004 a0001c0001 a0002c0004	a0001c0001t0001 a0002c0004t0001 a0001c0001t0001 a0002c0004t0001	a0001c0001t0001g0006 a0001c0001t0001g0048 a0002c0004t0001g0085 a0001c0001t0001g0006 a0001c0001t0001g0048 a0002c0004t0001g0085	3	132	0.0227	-26	c.223 others(43): Show c.223-9751_223-9726delTATATACACACACACAAATAAACACA	CUX1	ENSG00000257923.12	transcript	ENST00000622516.6	protein_coding	3/22		INFO_REALIGN_3_PRIME	chr7	TogoVar
CUX1_chr7_101811007_102288958	102216631	CCCCACAC others(19): Show CCCCACACACGCACACACACACACTCT	C C	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02615.hp1 HG02647.hp1 others(4): Show HG02572.hp2 HG02615.hp1 HG02647.hp1 HG02723.hp2 HG02976.hp1 HG03130.hp1 HG03540.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0005 a0001c0001 a0002c0005	a0001c0001t0001 a0001c0001t0010 a0002c0005t0001 a0001c0001t0001 a0001c0001t0010 a0002c0005t0001	a0001c0001t0001g0042 a0001c0001t0001g0124 a0001c0001t0001g0127 others(4): Show a0001c0001t0001g0042 a0001c0001t0001g0124 a0001c0001t0001g0127 a0001c0001t0010g0131 a0002c0005t0001g0005 a0002c0005t0001g0017 a0002c0005t0001g0097	7	132	0.0530	-26	c.125 others(47): Show c.1255+21038_1255+21063delGCACACACACACACTCTCCCACAC AC	CUX1	ENSG00000257923.12	transcript	ENST00000622516.6	protein_coding	14/22		INFO_REALIGN_3_PRIME	chr7	TogoVar
CUX1_chr7_101811007_102288958	102216782	ACACACAC others(19): Show ACACACACACTCTCCCACACACACCCC	A A	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00423.hp2 HG00544.hp2 others(44): Show HG00423.hp1 HG00423.hp2 HG00544.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00735.hp1 HG01074.hp2 HG01099.hp1 HG01168.hp1 HG01169.hp1 HG01192.hp2 HG01255.hp1 HG01255.hp2 HG01258.hp1 HG01258.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp2 HG01934.hp2 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02280.hp2 HG02300.hp2 HG02630.hp1 HG02717.hp2 HG02735.hp2 HG02818.hp1 HG02976.hp2 HG03130.hp2 HG03139.hp1 HG03209.hp1 HG03239.hp2 HG03669.hp2 HG03927.hp1 HG04115.hp2 HG04199.hp2 NA18747.hp1 NA18945.hp2 NA18954.hp1 NA19030.hp1 NA19043.hp2 NA19056.hp2 NA20752.hp1 NA21309.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0004 others(1): Show a0001 a0002 a0004 a0005	a0001c0002 a0002c0003 a0002c0004 others(2): Show a0001c0002 a0002c0003 a0002c0004 a0004c0010 a0005c0011	a0001c0002t0001 a0001c0002t0006 a0002c0003t0001 others(6): Show a0001c0002t0001 a0001c0002t0006 a0002c0003t0001 a0002c0003t0002 a0002c0003t0012 a0002c0004t0001 a0002c0004t0009 a0004c0010t0001 a0005c0011t0001	a0001c0002t0001g0008 a0001c0002t0001g0020 a0001c0002t0001g0021 others(44): Show a0001c0002t0001g0008 a0001c0002t0001g0020 a0001c0002t0001g0021 a0001c0002t0001g0023 a0001c0002t0001g0024 a0001c0002t0001g0033 a0001c0002t0001g0035 a0001c0002t0001g0037 a0001c0002t0001g0043 a0001c0002t0001g0047 a0001c0002t0001g0050 a0001c0002t0001g0056 a0001c0002t0001g0060 a0001c0002t0001g0064 a0001c0002t0001g0065 a0001c0002t0001g0066 a0001c0002t0001g0088 a0001c0002t0001g0094 a0001c0002t0001g0110 a0001c0002t0001g0125 a0001c0002t0001g0126 a0001c0002t0006g0046 a0002c0003t0001g0111 a0002c0003t0002g0022 a0002c0003t0002g0036 a0002c0003t0002g0038 a0002c0003t0002g0052 a0002c0003t0002g0076 a0002c0003t0002g0104 a0002c0003t0002g0121 a0002c0003t0012g0116 a0002c0004t0001g0012 a0002c0004t0001g0026 a0002c0004t0001g0027 a0002c0004t0001g0039 a0002c0004t0001g0045 a0002c0004t0001g0051 a0002c0004t0001g0058 a0002c0004t0001g0063 a0002c0004t0001g0086 a0002c0004t0001g0091 a0002c0004t0001g0101 a0002c0004t0001g0113 a0002c0004t0001g0117 a0002c0004t0009g0112 a0004c0010t0001g0073 a0005c0011t0001g0123	47	132	0.3561	-26	c.125 others(47): Show c.1255+21197_1255+21222delACACACCCCCACACACACTCTCCC AC	CUX1	ENSG00000257923.12	transcript	ENST00000622516.6	protein_coding	14/22		INFO_REALIGN_3_PRIME	chr7	TogoVar
CUX1_chr7_101812626_102263233	101939058	CATATATA others(19): Show CATATATATATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02818.hp2 HG02897.hp1 others(1): Show HG01884.hp1 HG02818.hp2 HG02897.hp1 HG03540.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0002c0005	a0001c0001t0047 a0001c0002t0063 a0001c0003t0054 others(1): Show a0001c0001t0047 a0001c0002t0063 a0001c0003t0054 a0002c0005t0013	a0001c0001t0047g0084 a0001c0002t0063g0092 a0001c0003t0054g0053 others(1): Show a0001c0001t0047g0084 a0001c0002t0063g0092 a0001c0003t0054g0053 a0002c0005t0013g0078	4	136	0.0294	-26	c.141 others(45): Show c.141+22864_141+22889delATATATATATATATATATATATATAT	CUX1	ENSG00000257923.12	transcript	ENST00000292535.12	protein_coding	2/23		INFO_REALIGN_3_PRIME	chr7	TogoVar
CUX1_chr7_101812626_102263233	101984111	TATATATA others(19): Show TATATATATATATATATATACACACAC	T T	intron_variant intron_variant	MODIFIER	HG03710.hp2 HG03710.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0101 a0001c0003t0001g0101	1	136	0.0074	-26	c.142 others(45): Show c.142-43985_142-43960delTATATATATATATATATACACACACA	CUX1	ENSG00000257923.12	transcript	ENST00000292535.12	protein_coding	2/23		INFO_REALIGN_3_PRIME	chr7	TogoVar
CUX1_chr7_101812626_102263233	102060586	TATATATA others(19): Show TATATATACACACACACAAATAAACAC	T T	intron_variant intron_variant	MODIFIER	HG02300.hp1 HG03669.hp2 HG03927.hp2 HG02300.hp1 HG03669.hp2 HG03927.hp2	a0001 a0001	a0001c0002 a0001c0004 a0001c0002 a0001c0004	a0001c0002t0001 a0001c0004t0007 a0001c0004t0040 a0001c0002t0001 a0001c0004t0007 a0001c0004t0040	a0001c0002t0001g0054 a0001c0004t0007g0131 a0001c0004t0040g0132 a0001c0002t0001g0054 a0001c0004t0007g0131 a0001c0004t0040g0132	3	136	0.0221	-26	c.190 others(43): Show c.190-9751_190-9726delTATATACACACACACAAATAAACACA	CUX1	ENSG00000257923.12	transcript	ENST00000292535.12	protein_coding	3/23		INFO_REALIGN_3_PRIME	chr7	TogoVar
CUX1_chr7_101812626_102263233	102216631	CCCCACAC others(19): Show CCCCACACACGCACACACACACACTCT	C C	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02615.hp1 HG02647.hp1 others(4): Show HG02572.hp1 HG02615.hp1 HG02647.hp1 HG02723.hp1 HG02976.hp1 HG03130.hp1 HG03540.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0004 a0001c0003t0005 a0001c0003t0004 a0001c0003t0005	a0001c0003t0004g0031 a0001c0003t0004g0034 a0001c0003t0004g0038 others(4): Show a0001c0003t0004g0031 a0001c0003t0004g0034 a0001c0003t0004g0038 a0001c0003t0004g0125 a0001c0003t0005g0005 a0001c0003t0005g0066 a0001c0003t0005g0083	7	136	0.0515	-26	c.313 others(47): Show c.3131-10726_3131-10701delGCACACACACACACTCTCCCACAC AC	CUX1	ENSG00000257923.12	transcript	ENST00000292535.12	protein_coding	20/23		INFO_REALIGN_3_PRIME	chr7	TogoVar
CUX1_chr7_101812626_102263233	102216782	ACACACAC others(19): Show ACACACACACTCTCCCACACACACCCC	A A	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00423.hp2 HG00544.hp2 others(47): Show HG00423.hp1 HG00423.hp2 HG00544.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00735.hp1 HG01074.hp2 HG01099.hp1 HG01123.hp1 HG01168.hp1 HG01169.hp1 HG01192.hp1 HG01255.hp1 HG01255.hp2 HG01258.hp1 HG01258.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp2 HG01934.hp2 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02280.hp1 HG02300.hp2 HG02630.hp1 HG02717.hp2 HG02735.hp2 HG02818.hp2 HG02976.hp2 HG03130.hp2 HG03139.hp2 HG03209.hp1 HG03239.hp2 HG03669.hp1 HG03710.hp1 HG03710.hp2 HG03927.hp1 HG04115.hp2 HG04199.hp2 NA18747.hp2 NA18954.hp1 NA19030.hp1 NA19043.hp2 NA19056.hp2 NA20129.hp1 NA20752.hp1 NA21309.hp1 homoSapiens_chm13v2.hp1	a0001 a0003 a0006 a0001 a0003 a0006	a0001c0001 a0001c0002 a0001c0003 others(6): Show a0001c0001 a0001c0002 a0001c0003 a0001c0006 a0001c0007 a0001c0012 a0001c0013 a0003c0015 a0006c0014	a0001c0001t0002 a0001c0001t0006 a0001c0001t0022 others(24): Show a0001c0001t0002 a0001c0001t0006 a0001c0001t0022 a0001c0001t0023 a0001c0001t0026 a0001c0001t0057 a0001c0001t0058 a0001c0002t0001 a0001c0002t0012 a0001c0002t0024 a0001c0002t0063 a0001c0002t0064 a0001c0002t0065 a0001c0002t0066 a0001c0002t0067 a0001c0002t0068 a0001c0002t0069 a0001c0002t0070 a0001c0002t0071 a0001c0002t0072 a0001c0003t0001 a0001c0006t0062 a0001c0007t0001 a0001c0012t0061 a0001c0013t0001 a0003c0015t0027 a0006c0014t0001	a0001c0001t0002g0105 a0001c0001t0006g0009 a0001c0001t0006g0029 others(47): Show a0001c0001t0002g0105 a0001c0001t0006g0009 a0001c0001t0006g0029 a0001c0001t0006g0043 a0001c0001t0006g0082 a0001c0001t0022g0060 a0001c0001t0023g0117 a0001c0001t0023g0119 a0001c0001t0026g0130 a0001c0001t0057g0090 a0001c0001t0058g0118 a0001c0002t0001g0014 a0001c0002t0001g0018 a0001c0002t0001g0021 a0001c0002t0001g0055 a0001c0002t0001g0063 a0001c0002t0001g0081 a0001c0002t0001g0093 a0001c0002t0001g0095 a0001c0002t0001g0098 a0001c0002t0001g0100 a0001c0002t0001g0104 a0001c0002t0001g0112 a0001c0002t0001g0114 a0001c0002t0001g0115 a0001c0002t0001g0121 a0001c0002t0001g0135 a0001c0002t0012g0032 a0001c0002t0012g0033 a0001c0002t0012g0057 a0001c0002t0024g0010 a0001c0002t0024g0126 a0001c0002t0063g0092 a0001c0002t0064g0080 a0001c0002t0065g0120 a0001c0002t0066g0128 a0001c0002t0067g0074 a0001c0002t0068g0015 a0001c0002t0069g0094 a0001c0002t0070g0122 a0001c0002t0071g0091 a0001c0002t0072g0020 a0001c0003t0001g0101 a0001c0006t0062g0019 a0001c0007t0001g0012 a0001c0007t0001g0116 a0001c0012t0061g0096 a0001c0013t0001g0129 a0003c0015t0027g0133 a0006c0014t0001g0071	50	136	0.3677	-26	c.313 others(47): Show c.3131-10567_3131-10542delACACACCCCCACACACACTCTCCC AC	CUX1	ENSG00000257923.12	transcript	ENST00000292535.12	protein_coding	20/23		INFO_REALIGN_3_PRIME	chr7	TogoVar
CUX2_chr12_111029165_111355554	111074057	ACATTGTT others(19): Show ACATTGTTTATCTGAAATGAAATGTGT	A A	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG02280.hp2 HG02486.hp1 others(4): Show HG01081.hp1 HG02280.hp2 HG02486.hp1 HG02922.hp1 HG03209.hp2 HG03540.hp1 NA19043.hp1	a0001 a0001	a0001c0004 a0001c0005 a0001c0008 others(2): Show a0001c0004 a0001c0005 a0001c0008 a0001c0011 a0001c0014	a0001c0004t0001 a0001c0004t0004 a0001c0004t0006 others(4): Show a0001c0004t0001 a0001c0004t0004 a0001c0004t0006 a0001c0005t0001 a0001c0008t0001 a0001c0011t0001 a0001c0014t0001	a0001c0004t0001g0002 a0001c0004t0004g0041 a0001c0004t0006g0075 others(4): Show a0001c0004t0001g0002 a0001c0004t0004g0041 a0001c0004t0006g0075 a0001c0005t0001g0019 a0001c0008t0001g0003 a0001c0011t0001g0001 a0001c0014t0001g0042	7	100	0.0700	-26	c.63+ others(43): Show c.63+39845_63+39870delATTGTTTATCTGAAATGAAATGTGTC	CUX2	ENSG00000111249.14	transcript	ENST00000261726.11	protein_coding	1/21		INFO_REALIGN_3_PRIME	chr12	TogoVar
CWC27_chr5_64763930_65023750	65004861	CATATATA others(19): Show CATATATATATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02559.hp2 HG02965.hp1 others(3): Show HG01884.hp1 HG02559.hp2 HG02965.hp1 NA19043.hp1 NA19240.hp2 NA21309.hp1	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0002 a0002c0004t0002	a0002c0004t0002g0002 a0002c0004t0002g0003 a0002c0004t0002g0004 others(3): Show a0002c0004t0002g0002 a0002c0004t0002g0003 a0002c0004t0002g0004 a0002c0004t0002g0005 a0002c0004t0002g0006 a0002c0004t0002g0075	6	260	0.0231	-26	c.125 others(47): Show c.1257-13278_1257-13253delTATATATATATATATATATATATA TA	CWC27	ENSG00000153015.17	transcript	ENST00000381070.8	protein_coding	13/13		INFO_REALIGN_3_PRIME	chr5	TogoVar
CWF19L2_chr11_107321360_107462825	107433880	TTATATAT others(19): Show TTATATATATATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02109.hp2 HG02280.hp1 others(7): Show HG01243.hp1 HG02109.hp2 HG02280.hp1 HG02559.hp2 HG02647.hp2 HG02717.hp1 HG02818.hp1 HG02965.hp2 HG03579.hp2 NA19240.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0002 a0002c0002t0003 a0001c0001t0002 a0002c0002t0003	a0001c0001t0002g0358 a0002c0002t0003g0353 a0002c0002t0003g0354 others(7): Show a0001c0001t0002g0358 a0002c0002t0003g0353 a0002c0002t0003g0354 a0002c0002t0003g0355 a0002c0002t0003g0361 a0002c0002t0003g0362 a0002c0002t0003g0363 a0002c0002t0003g0364 a0002c0002t0003g0365 a0002c0002t0003g0366	10	392	0.0255	-26	c.665 others(41): Show c.665-157_665-132delTATATATATATATATATATATATATA	CWF19L2	ENSG00000152404.16	transcript	ENST00000282251.10	protein_coding	6/17			chr11	TogoVar
CWF19L2_chr11_107321360_107462825	107460485	TTATATAT others(19): Show TTATATATATATATATATATATATATA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00280.hp1 HG00423.hp1 HG00544.hp2 others(47): Show HG00280.hp1 HG00423.hp1 HG00544.hp2 HG00609.hp1 HG00639.hp1 HG00741.hp1 HG01069.hp2 HG01074.hp2 HG01099.hp2 HG01169.hp2 HG01256.hp1 HG01257.hp2 HG01358.hp1 HG01433.hp2 HG01496.hp1 HG01943.hp1 HG01978.hp2 HG02015.hp1 HG02074.hp1 HG02129.hp1 HG02135.hp2 HG02300.hp2 HG02683.hp2 HG03209.hp1 HG03490.hp1 HG03491.hp2 HG03654.hp2 HG03688.hp2 HG03704.hp1 HG04184.hp1 HG06807.hp1 NA18747.hp1 NA18940.hp2 NA18943.hp2 NA18944.hp1 NA18948.hp2 NA18953.hp2 NA18957.hp2 NA18968.hp2 NA18973.hp1 NA18993.hp2 NA18998.hp1 NA18999.hp1 NA19063.hp1 NA19070.hp2 NA19074.hp1 NA19080.hp1 NA19082.hp1 NA19086.hp2 NA20752.hp1	a0001 a0007 a0001 a0007	a0001c0001 a0007c0007 a0001c0001 a0007c0007	a0001c0001t0004 a0001c0001t0009 a0001c0001t0010 others(1): Show a0001c0001t0004 a0001c0001t0009 a0001c0001t0010 a0007c0007t0007	a0001c0001t0004g0013 a0001c0001t0004g0030 a0001c0001t0004g0053 others(47): Show a0001c0001t0004g0013 a0001c0001t0004g0030 a0001c0001t0004g0053 a0001c0001t0004g0054 a0001c0001t0004g0055 a0001c0001t0004g0056 a0001c0001t0004g0057 a0001c0001t0004g0058 a0001c0001t0004g0059 a0001c0001t0004g0060 a0001c0001t0004g0061 a0001c0001t0004g0063 a0001c0001t0004g0065 a0001c0001t0004g0066 a0001c0001t0004g0068 a0001c0001t0004g0070 a0001c0001t0004g0071 a0001c0001t0004g0072 a0001c0001t0004g0076 a0001c0001t0004g0077 a0001c0001t0004g0078 a0001c0001t0004g0079 a0001c0001t0004g0080 a0001c0001t0004g0081 a0001c0001t0004g0082 a0001c0001t0004g0084 a0001c0001t0004g0085 a0001c0001t0004g0086 a0001c0001t0004g0087 a0001c0001t0004g0088 a0001c0001t0004g0090 a0001c0001t0004g0096 a0001c0001t0004g0097 a0001c0001t0004g0119 a0001c0001t0004g0274 a0001c0001t0004g0275 a0001c0001t0004g0276 a0001c0001t0004g0277 a0001c0001t0004g0278 a0001c0001t0004g0279 a0001c0001t0004g0280 a0001c0001t0004g0281 a0001c0001t0004g0282 a0001c0001t0004g0283 a0001c0001t0004g0312 a0001c0001t0004g0313 a0001c0001t0009g0074 a0001c0001t0010g0223 a0007c0007t0007g0005 a0007c0007t0007g0007	50	392	0.1276	-26	c.-26 others(37): Show c.-2695_-2670delTATATATATATATATATATATATATA	CWF19L2	ENSG00000152404.16	transcript	ENST00000282251.10	protein_coding		2661		chr11	TogoVar
CX3CL1_chr16_57367490_57390044	57381161	TTGGTTTC others(19): Show TTGGTTTCCTCATCTGTAAAATGGGGA	T T	intron_variant intron_variant	MODIFIER	NA18956.hp1 NA18956.hp1	a0002 a0002	a0002c0012 a0002c0012	a0002c0012t0015 a0002c0012t0015	a0002c0012t0015g0078 a0002c0012t0015g0078	1	430	0.0023	-26	c.192 others(41): Show c.192-866_192-841delGTTTCCTCATCTGTAAAATGGGGATG	CX3CL1	ENSG00000006210.7	transcript	ENST00000006053.7	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr16	TogoVar
CX3CR1_chr3_39258496_39285036	39283795	TTATATAT others(19): Show TTATATATATATATATATATATATATA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00280.hp1 HG00738.hp2 HG00741.hp2 others(45): Show HG00280.hp1 HG00738.hp2 HG00741.hp2 HG01168.hp1 HG01169.hp1 HG01243.hp1 HG01243.hp2 HG01433.hp1 HG01496.hp2 HG01517.hp2 HG01934.hp2 HG02145.hp2 HG02148.hp2 HG02257.hp1 HG02486.hp1 HG02559.hp1 HG02602.hp1 HG02615.hp1 HG02630.hp1 HG02647.hp2 HG02809.hp1 HG02818.hp1 HG02818.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp2 HG02897.hp1 HG02965.hp2 HG02970.hp1 HG03098.hp2 HG03130.hp2 HG03209.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG03540.hp2 HG03704.hp1 HG03831.hp1 NA18522.hp2 NA18906.hp1 NA19030.hp1 NA19240.hp1 NA20129.hp1 NA20300.hp1 NA20752.hp2 NA20805.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0006 a0002c0002 others(2): Show a0001c0001 a0001c0006 a0002c0002 a0003c0003 a0003c0007	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 others(5): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0006t0008 a0002c0002t0002 a0003c0003t0002 a0003c0007t0002	a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0034 others(26): Show a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0034 a0001c0001t0001g0041 a0001c0001t0001g0070 a0001c0001t0001g0074 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0135 a0001c0001t0004g0012 a0001c0001t0004g0113 a0001c0001t0004g0127 a0001c0001t0004g0134 a0001c0001t0005g0016 a0001c0001t0005g0056 a0001c0001t0005g0125 a0001c0001t0006g0181 a0001c0006t0008g0031 a0001c0006t0008g0136 a0001c0006t0008g0137 a0002c0002t0002g0047 a0002c0002t0002g0071 a0003c0003t0002g0010 a0003c0003t0002g0018 a0003c0003t0002g0040 a0003c0003t0002g0042 a0003c0003t0002g0072 a0003c0007t0002g0124 a0003c0007t0002g0126	48	420	0.1143	-26	c.-38 others(37): Show c.-3877_-3852delTATATATATATATATATATATATATA	CX3CR1	ENSG00000168329.14	transcript	ENST00000399220.3	protein_coding		3760		chr3	TogoVar
CXCL1_chr4_73864393_73876308	73867731	TATATATA others(19): Show TATATATATATATATATATATATATAA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18952.hp1 NA18952.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0002	1	448	0.0022	-26	c.-17 others(37): Show c.-1739_-1714delATATATATATATATATATATATATAA	CXCL1	ENSG00000163739.5	transcript	ENST00000395761.4	protein_coding		1661		chr4	TogoVar
CXCL1_chr4_73864393_73876308	73867739	TATATATA others(19): Show TATATATATATATATATAAATATATAA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02071.hp2 HG02922.hp2 NA19085.hp2 HG02071.hp2 HG02922.hp2 NA19085.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0001 a0001c0002t0002g0001	3	448	0.0067	-26	c.-17 others(37): Show c.-1731_-1706delATATATATATATATATAAATATATAA	CXCL1	ENSG00000163739.5	transcript	ENST00000395761.4	protein_coding		1653		chr4	TogoVar
CYB5R2_chr11_7660104_7678500	7665308	GTGAAATT others(19): Show GTGAAATTGAACTTACTCTGAAACAGA	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02622.hp1 HG02622.hp1	a0005 a0005	a0005c0005 a0005c0005	a0005c0005t0015 a0005c0005t0015	a0005c0005t0015g0093 a0005c0005t0015g0093	1	444	0.0023	-26	c.40 others(33): Show c.40_*65delTCTGTTTCAGAGTAAGTTCAATTTCA	CYB5R2	ENSG00000166394.15	transcript	ENST00000299498.11	protein_coding	9/9	40		chr11	TogoVar
CYFIP1_chr15_22862052_22985368	22964353	TCACACAC others(19): Show TCACACACACACACACACACACACACA	T T	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02572.hp1 HG02572.hp2 others(3): Show HG02258.hp1 HG02572.hp1 HG02572.hp2 HG02615.hp1 HG02647.hp2 HG03516.hp2	a0001 a0002 a0010 a0001 a0002 a0010	a0001c0002 a0001c0020 a0002c0003 others(2): Show a0001c0002 a0001c0020 a0002c0003 a0002c0024 a0010c0043	a0001c0002t0012 a0001c0020t0013 a0002c0003t0007 others(3): Show a0001c0002t0012 a0001c0020t0013 a0002c0003t0007 a0002c0003t0018 a0002c0024t0009 a0010c0043t0007	a0001c0002t0012g0096 a0001c0020t0013g0028 a0002c0003t0007g0027 others(3): Show a0001c0002t0012g0096 a0001c0020t0013g0028 a0002c0003t0007g0027 a0002c0003t0018g0057 a0002c0024t0009g0058 a0010c0043t0007g0029	6	342	0.0175	-26	c.-7+ others(43): Show c.-7+15908_-7+15933delTGTGTGTGTGTGTGTGTGTGTGTGTG	CYFIP1	ENSG00000273749.5	transcript	ENST00000617928.5	protein_coding	1/30			chr15	TogoVar
CYFIP2_chr5_157261123_157400594	157368714	TGACAGTT others(19): Show TGACAGTTAAGAGTCACTGGTTCCACA	T T	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp1 HG00140.hp2 others(59): Show HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00544.hp1 HG00639.hp1 HG00642.hp1 HG00738.hp2 HG01069.hp2 HG01070.hp2 HG01071.hp1 HG01074.hp2 HG01106.hp2 HG01167.hp2 HG01169.hp1 HG01192.hp2 HG01257.hp1 HG01258.hp2 HG01361.hp2 HG01496.hp1 HG01928.hp1 HG02004.hp2 HG02083.hp1 HG02129.hp1 HG02155.hp2 HG02257.hp2 HG02280.hp2 HG02451.hp1 HG02683.hp2 HG02698.hp1 HG02735.hp2 HG02738.hp2 HG02922.hp2 HG02970.hp1 HG02976.hp1 HG03017.hp2 HG03098.hp2 HG03579.hp2 HG03927.hp1 HG03942.hp1 HG04115.hp1 HG04184.hp1 HG04199.hp1 NA18944.hp1 NA18954.hp2 NA18955.hp2 NA18957.hp1 NA18969.hp2 NA18971.hp1 NA18973.hp2 NA18982.hp2 NA18987.hp1 NA18990.hp1 NA18994.hp2 NA18998.hp1 NA19004.hp1 NA19006.hp1 NA19007.hp2 NA19012.hp2 NA19056.hp2 NA19057.hp2 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0006 a0001c0001t0010 a0001c0001t0011 a0001c0001t0020 a0001c0001t0022 a0001c0001t0023 a0001c0001t0025 a0001c0002t0006	a0001c0001t0001g0166 a0001c0001t0001g0277 a0001c0001t0001g0310 others(59): Show a0001c0001t0001g0166 a0001c0001t0001g0277 a0001c0001t0001g0310 a0001c0001t0001g0311 a0001c0001t0002g0164 a0001c0001t0002g0165 a0001c0001t0002g0168 a0001c0001t0002g0171 a0001c0001t0002g0172 a0001c0001t0002g0174 a0001c0001t0002g0175 a0001c0001t0002g0176 a0001c0001t0002g0179 a0001c0001t0002g0180 a0001c0001t0002g0182 a0001c0001t0002g0183 a0001c0001t0002g0184 a0001c0001t0002g0185 a0001c0001t0002g0187 a0001c0001t0002g0188 a0001c0001t0002g0190 a0001c0001t0002g0191 a0001c0001t0002g0192 a0001c0001t0002g0193 a0001c0001t0002g0217 a0001c0001t0002g0225 a0001c0001t0002g0239 a0001c0001t0002g0269 a0001c0001t0002g0270 a0001c0001t0002g0283 a0001c0001t0002g0284 a0001c0001t0002g0285 a0001c0001t0002g0286 a0001c0001t0002g0287 a0001c0001t0002g0289 a0001c0001t0002g0290 a0001c0001t0002g0291 a0001c0001t0002g0294 a0001c0001t0002g0318 a0001c0001t0004g0281 a0001c0001t0006g0032 a0001c0001t0006g0092 a0001c0001t0006g0118 a0001c0001t0006g0267 a0001c0001t0006g0268 a0001c0001t0006g0271 a0001c0001t0006g0272 a0001c0001t0006g0273 a0001c0001t0006g0274 a0001c0001t0006g0275 a0001c0001t0006g0276 a0001c0001t0006g0279 a0001c0001t0010g0087 a0001c0001t0010g0167 a0001c0001t0010g0296 a0001c0001t0011g0181 a0001c0001t0011g0282 a0001c0001t0020g0295 a0001c0001t0022g0053 a0001c0001t0023g0056 a0001c0001t0025g0069 a0001c0002t0006g0278	62	326	0.1902	-26	c.303 others(45): Show c.3039+7121_3039+7146delGTTAAGAGTCACTGGTTCCACAGACA	CYFIP2	ENSG00000055163.21	transcript	ENST00000620254.5	protein_coding	26/30		INFO_REALIGN_3_PRIME	chr5	TogoVar
CYLC2_chr9_102990333_103023488	103014421	AATAACAT others(19): Show AATAACATAATGTATATTACATAATAT	A A	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00609.hp2 HG00621.hp2 others(133): Show HG00423.hp1 HG00609.hp2 HG00621.hp2 HG00735.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01070.hp2 HG01071.hp2 HG01074.hp1 HG01099.hp2 HG01256.hp1 HG01256.hp2 HG01258.hp2 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01361.hp2 HG01891.hp1 HG01943.hp2 HG01975.hp1 HG01978.hp1 HG02015.hp2 HG02040.hp2 HG02056.hp1 HG02071.hp1 HG02080.hp2 HG02083.hp1 HG02109.hp2 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02155.hp1 HG02165.hp2 HG02273.hp2 HG02280.hp2 HG02293.hp1 HG02300.hp1 HG02523.hp1 HG02559.hp1 HG02559.hp2 HG02698.hp1 HG02698.hp2 HG02735.hp2 HG02738.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG02965.hp1 HG03017.hp2 HG03041.hp1 HG03098.hp1 HG03139.hp2 HG03195.hp1 HG03579.hp1 HG03688.hp1 HG03704.hp2 HG03710.hp1 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04199.hp1 HG04204.hp1 HG04204.hp2 HG04228.hp2 HG06807.hp1 NA18747.hp2 NA18939.hp1 NA18939.hp2 NA18941.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18945.hp1 NA18945.hp2 NA18949.hp2 NA18951.hp2 NA18955.hp2 NA18956.hp1 NA18962.hp2 NA18963.hp2 NA18964.hp2 NA18965.hp2 NA18968.hp1 NA18969.hp2 NA18971.hp2 NA18973.hp1 NA18975.hp2 NA18981.hp2 NA18982.hp1 NA18983.hp2 NA18984.hp2 NA18985.hp2 NA18986.hp1 NA18989.hp1 NA18991.hp1 NA18992.hp2 NA18994.hp1 NA19002.hp1 NA19003.hp1 NA19006.hp1 NA19007.hp2 NA19009.hp1 NA19010.hp1 NA19010.hp2 NA19012.hp1 NA19012.hp2 NA19058.hp1 NA19059.hp2 NA19060.hp1 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19065.hp1 NA19066.hp2 NA19070.hp1 NA19074.hp2 NA19075.hp1 NA19075.hp2 NA19076.hp2 NA19077.hp2 NA19078.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19081.hp1 NA19082.hp1 NA19083.hp1 NA19084.hp1 NA19085.hp1 NA19086.hp1 NA19088.hp2 NA19240.hp1	a0001 a0004 a0006 others(3): Show a0001 a0004 a0006 a0007 a0008 a0009	a0001c0001 a0004c0004 a0006c0007 others(3): Show a0001c0001 a0004c0004 a0006c0007 a0007c0008 a0008c0010 a0009c0011	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(21): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0011 a0001c0001t0012 a0001c0001t0014 a0001c0001t0023 a0001c0001t0024 a0001c0001t0044 a0001c0001t0047 a0001c0001t0048 a0001c0001t0049 a0001c0001t0050 a0001c0001t0056 a0004c0004t0009 a0006c0007t0061 a0007c0008t0012 a0007c0008t0023 a0008c0010t0012 a0009c0011t0023	a0001c0001t0002g0082 a0001c0001t0003g0001 a0001c0001t0003g0003 others(98): Show a0001c0001t0002g0082 a0001c0001t0003g0001 a0001c0001t0003g0003 a0001c0001t0003g0011 a0001c0001t0003g0021 a0001c0001t0003g0022 a0001c0001t0003g0024 a0001c0001t0003g0050 a0001c0001t0003g0051 a0001c0001t0003g0052 a0001c0001t0003g0055 a0001c0001t0003g0057 a0001c0001t0003g0213 a0001c0001t0003g0219 a0001c0001t0003g0225 a0001c0001t0003g0226 a0001c0001t0003g0227 a0001c0001t0003g0231 a0001c0001t0003g0235 a0001c0001t0004g0001 a0001c0001t0004g0003 a0001c0001t0004g0011 a0001c0001t0004g0019 a0001c0001t0004g0024 a0001c0001t0004g0038 a0001c0001t0004g0039 a0001c0001t0004g0059 a0001c0001t0004g0116 a0001c0001t0004g0167 a0001c0001t0004g0206 a0001c0001t0004g0217 a0001c0001t0004g0218 a0001c0001t0004g0236 a0001c0001t0004g0242 a0001c0001t0004g0244 a0001c0001t0005g0001 a0001c0001t0005g0003 a0001c0001t0005g0011 a0001c0001t0005g0020 a0001c0001t0005g0021 a0001c0001t0005g0022 a0001c0001t0005g0037 a0001c0001t0005g0054 a0001c0001t0005g0171 a0001c0001t0005g0210 a0001c0001t0005g0215 a0001c0001t0005g0229 a0001c0001t0005g0238 a0001c0001t0007g0120 a0001c0001t0007g0204 a0001c0001t0008g0001 a0001c0001t0008g0023 a0001c0001t0008g0038 a0001c0001t0008g0049 a0001c0001t0008g0050 a0001c0001t0008g0052 a0001c0001t0008g0053 a0001c0001t0008g0214 a0001c0001t0008g0223 a0001c0001t0008g0228 a0001c0001t0008g0232 a0001c0001t0008g0239 a0001c0001t0008g0240 a0001c0001t0009g0001 a0001c0001t0009g0019 a0001c0001t0009g0020 a0001c0001t0009g0055 a0001c0001t0009g0177 a0001c0001t0009g0178 a0001c0001t0009g0207 a0001c0001t0009g0216 a0001c0001t0009g0222 a0001c0001t0011g0233 a0001c0001t0011g0234 a0001c0001t0012g0001 a0001c0001t0012g0019 a0001c0001t0012g0023 a0001c0001t0012g0036 a0001c0001t0012g0051 a0001c0001t0012g0053 a0001c0001t0014g0237 a0001c0001t0023g0220 a0001c0001t0023g0221 a0001c0001t0023g0230 a0001c0001t0024g0023 a0001c0001t0024g0054 a0001c0001t0024g0208 a0001c0001t0024g0211 a0001c0001t0044g0003 a0001c0001t0047g0241 a0001c0001t0048g0056 a0001c0001t0049g0056 a0001c0001t0050g0001 a0001c0001t0056g0049 a0004c0004t0009g0063 a0004c0004t0009g0279 a0006c0007t0061g0197 a0007c0008t0012g0001 a0007c0008t0023g0224 a0008c0010t0012g0001 a0009c0011t0023g0205	136	448	0.3036	-26	c.81 others(45): Show c.816+2326_*816+2351delTAACATAATGTATATTACATAATATA	CYLC2	ENSG00000155833.15	transcript	ENST00000374798.8	protein_coding	6/7		INFO_REALIGN_3_PRIME	chr9	TogoVar
CYP11B1_chr8_142867357_142884825	142884525	CATGGGTG others(19): Show CATGGGTGGGTCATATGGTAATTTTAT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18945.hp1 NA18945.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0006 a0001c0001t0001g0006	1	428	0.0023	-26	c.-47 others(37): Show c.-4738_-4713delATAAAATTACCATATGACCCACCCAT	CYP11B1	ENSG00000160882.13	transcript	ENST00000292427.10	protein_coding		4701		chr8	TogoVar
CYP1A1_chr15_74714542_74730528	74714561	GTATATAT others(19): Show GTATATATTATATATGTGTATATATAA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp2 HG00423.hp1 HG00423.hp2 others(70): Show HG00099.hp2 HG00423.hp1 HG00423.hp2 HG00544.hp1 HG00609.hp1 HG00733.hp2 HG00735.hp1 HG01243.hp1 HG01261.hp1 HG01346.hp1 HG01361.hp2 HG01928.hp1 HG01943.hp2 HG01975.hp1 HG01978.hp2 HG01993.hp1 HG02004.hp2 HG02015.hp2 HG02055.hp1 HG02055.hp2 HG02071.hp1 HG02080.hp2 HG02129.hp2 HG02135.hp2 HG02155.hp1 HG02165.hp2 HG02683.hp2 HG02717.hp2 HG02809.hp2 HG02970.hp2 HG03017.hp1 HG03195.hp2 HG03471.hp2 HG03490.hp1 HG03490.hp2 HG03492.hp2 HG03540.hp1 HG03579.hp2 HG03834.hp1 HG04199.hp1 HG04228.hp2 NA18947.hp2 NA18951.hp1 NA18952.hp2 NA18957.hp1 NA18963.hp2 NA18964.hp1 NA18968.hp2 NA18969.hp2 NA18970.hp2 NA18971.hp1 NA18977.hp1 NA18980.hp2 NA18983.hp2 NA18985.hp2 NA18986.hp1 NA18987.hp1 NA19011.hp2 NA19043.hp2 NA19054.hp1 NA19065.hp2 NA19066.hp1 NA19067.hp2 NA19077.hp2 NA19081.hp2 NA19082.hp2 NA19084.hp2 NA19086.hp1 NA19087.hp1 NA19090.hp1 NA19091.hp1 NA20129.hp2 NA20752.hp2	a0001 a0002 a0006 others(2): Show a0001 a0002 a0006 a0014 a0016	a0001c0001 a0002c0002 a0006c0006 others(2): Show a0001c0001 a0002c0002 a0006c0006 a0014c0019 a0016c0010	a0001c0001t0001 a0002c0002t0001 a0006c0006t0001 others(2): Show a0001c0001t0001 a0002c0002t0001 a0006c0006t0001 a0014c0019t0001 a0016c0010t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 others(9): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0008 a0001c0001t0001g0043 a0002c0002t0001g0003 a0002c0002t0001g0011 a0002c0002t0001g0030 a0002c0002t0001g0034 a0006c0006t0001g0038 a0014c0019t0001g0037 a0016c0010t0001g0033	73	434	0.1682	-26	c.59 others(37): Show c.5902_*5927delTTATATATACACATATATAATATATA	CYP1A1	ENSG00000140465.15	transcript	ENST00000379727.8	protein_coding		4980		chr15	TogoVar
CYP1A1_chr15_74714542_74730528	74715967	AATATAAT others(19): Show AATATAATACATATAAAGATATATAAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01243.hp2 HG01255.hp2 HG02717.hp1 others(9): Show HG01243.hp2 HG01255.hp2 HG02717.hp1 HG02886.hp2 HG02896.hp1 HG02897.hp2 HG02976.hp1 HG03098.hp2 HG03139.hp1 HG03209.hp2 HG03225.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0001 a0001c0001t0002g0006 a0001c0001t0001g0001 a0001c0001t0002g0006	12	434	0.0277	-26	c.44 others(37): Show c.4496_*4521delATTATATATCTTTATATGTATTATAT	CYP1A1	ENSG00000140465.15	transcript	ENST00000379727.8	protein_coding		3574		chr15	TogoVar
CYP2A13_chr19_41083451_41101195	41086557	CCACTCTT others(19): Show CCACTCTTATGCCCTCCTGAAGCAGGA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00558.hp2 HG00642.hp1 HG00738.hp1 others(39): Show HG00558.hp2 HG00642.hp1 HG00738.hp1 HG01123.hp1 HG01496.hp1 HG02145.hp1 HG02145.hp2 HG02257.hp2 HG02258.hp2 HG02622.hp1 HG02630.hp1 HG02818.hp2 HG02896.hp2 HG02897.hp2 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03098.hp1 HG03195.hp2 HG03486.hp2 HG03516.hp1 HG04199.hp1 HG04204.hp2 HG04228.hp1 NA18522.hp2 NA18747.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18961.hp2 NA18970.hp2 NA18974.hp1 NA18982.hp2 NA19043.hp1 NA19043.hp2 NA19060.hp1 NA19082.hp1 NA19083.hp1 NA19240.hp2 NA20129.hp1 NA21309.hp1 NA21309.hp2	a0002 a0007 a0010 others(1): Show a0002 a0007 a0010 a0016	a0002c0002 a0002c0010 a0002c0023 others(3): Show a0002c0002 a0002c0010 a0002c0023 a0007c0008 a0010c0014 a0016c0012	a0002c0002t0001 a0002c0002t0003 a0002c0002t0005 others(5): Show a0002c0002t0001 a0002c0002t0003 a0002c0002t0005 a0002c0010t0003 a0002c0023t0003 a0007c0008t0003 a0010c0014t0003 a0016c0012t0003	a0002c0002t0001g0045 a0002c0002t0001g0050 a0002c0002t0001g0094 others(19): Show a0002c0002t0001g0045 a0002c0002t0001g0050 a0002c0002t0001g0094 a0002c0002t0003g0002 a0002c0002t0003g0023 a0002c0002t0003g0030 a0002c0002t0003g0031 a0002c0002t0003g0041 a0002c0002t0003g0090 a0002c0002t0003g0093 a0002c0002t0003g0095 a0002c0002t0003g0098 a0002c0002t0003g0099 a0002c0002t0003g0105 a0002c0002t0003g0149 a0002c0002t0005g0085 a0002c0002t0005g0086 a0002c0010t0003g0040 a0002c0023t0003g0091 a0007c0008t0003g0023 a0010c0014t0003g0002 a0016c0012t0003g0002	42	422	0.0995	-26	c.-19 others(37): Show c.-1914_-1889delCACTCTTATGCCCTCCTGAAGCAGGA	CYP2A13	ENSG00000197838.5	transcript	ENST00000330436.4	protein_coding		1893		chr19	TogoVar
CYP2A13_chr19_41083451_41101195	41089804	GTCTCTCT others(19): Show GTCTCTCTCTCTCTCTCTCTCTCTCTC	G G	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01069.hp2 HG01433.hp1 others(23): Show HG00735.hp1 HG01069.hp2 HG01433.hp1 HG01952.hp1 HG01978.hp1 HG01993.hp1 HG02004.hp1 HG02004.hp2 HG02148.hp1 HG02148.hp2 HG02273.hp2 HG02300.hp2 HG02622.hp1 HG02683.hp2 HG02886.hp1 HG02896.hp2 HG02897.hp2 HG03195.hp1 HG03491.hp2 HG03492.hp2 HG04204.hp1 HG04228.hp1 NA18747.hp1 NA18970.hp2 NA19043.hp1 NA19083.hp1	a0001 a0002 a0007 a0001 a0002 a0007	a0001c0001 a0002c0002 a0002c0023 others(1): Show a0001c0001 a0002c0002 a0002c0023 a0007c0008	a0001c0001t0001 a0001c0001t0002 a0002c0002t0003 others(2): Show a0001c0001t0001 a0001c0001t0002 a0002c0002t0003 a0002c0023t0003 a0007c0008t0003	a0001c0001t0001g0089 a0001c0001t0002g0003 a0001c0001t0002g0042 others(8): Show a0001c0001t0001g0089 a0001c0001t0002g0003 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0192 a0001c0001t0002g0193 a0002c0002t0003g0023 a0002c0002t0003g0041 a0002c0002t0003g0090 a0002c0023t0003g0091 a0007c0008t0003g0023	26	422	0.0616	-26	c.344 others(41): Show c.344-200_344-175delTCTCTCTCTCTCTCTCTCTCTCTCTC	CYP2A13	ENSG00000197838.5	transcript	ENST00000330436.4	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr19	TogoVar
CYP2A13_chr19_41083451_41101195	41089849	TCTCTCTC others(19): Show TCTCTCTCTCTCTCTCTCTCTCTCGTG	T T	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG03540.hp1 HG01884.hp1 HG03540.hp1	a0006 a0006	a0006c0007 a0006c0007	a0006c0007t0001 a0006c0007t0001	a0006c0007t0001g0039 a0006c0007t0001g0039	2	422	0.0047	-26	c.344 others(41): Show c.344-192_344-167delTCTCTCTCTCTCTCTCTCGTGCTCTC	CYP2A13	ENSG00000197838.5	transcript	ENST00000330436.4	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr19	TogoVar
CYP2C9_chr10_94933658_94995091	94934604	ATATATGT others(19): Show ATATATGTGTATATATATATATATGTG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03490.hp1 HG03492.hp2 HG03490.hp1 HG03492.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0044 a0001c0001t0002g0044	2	374	0.0054	-26	c.-40 others(37): Show c.-4078_-4053delTATATGTGTATATATATATATATGTG	CYP2C9	ENSG00000138109.11	transcript	ENST00000260682.8	protein_coding		4053		chr10	TogoVar
CYP2C9_chr10_94933658_94995091	94934630	GTATATAT others(19): Show GTATATATATATATATGTGTATATATA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02451.hp1 HG02451.hp1	a0008 a0008	a0008c0012 a0008c0012	a0008c0012t0002 a0008c0012t0002	a0008c0012t0002g0282 a0008c0012t0002g0282	1	374	0.0027	-26	c.-40 others(37): Show c.-4052_-4027delTATATATATATATATGTGTATATATA	CYP2C9	ENSG00000138109.11	transcript	ENST00000260682.8	protein_coding		4027		chr10	TogoVar
CYP2S1_chr19_41188219_41212539	41205344	TTCTTTCT others(19): Show TTCTTTCTTTCTTTCTTTCTTTCTTTC	T T	intron_variant intron_variant	MODIFIER	HG03453.hp1 HG03453.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0110 a0001c0001t0002g0110	1	422	0.0024	-26	c.116 others(43): Show c.1165-612_1165-587delCTTTCTTTCTTTCTTTCTTTCTTTCT	CYP2S1	ENSG00000167600.14	transcript	ENST00000310054.9	protein_coding	7/8		INFO_REALIGN_3_PRIME	chr19	TogoVar
CYP39A1_chr6_46544580_46657818	46655529	ATGTTTGT others(19): Show ATGTTTGTTTTTTTTTTTTTTTTTTTT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02300.hp1 HG02300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0087 a0001c0001t0001g0087	1	310	0.0032	-26	c.-29 others(37): Show c.-2973_-2948delAAAAAAAAAAAAAAAAAAAACAAACA	CYP39A1	ENSG00000146233.8	transcript	ENST00000275016.3	protein_coding		2712		chr6	TogoVar
CYP39A1_chr6_46544580_46657818	46655531	GTTTGTTT others(19): Show GTTTGTTTTTTTTTTTTTTTTTTTTTT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01884.hp2 HG02717.hp1 HG02809.hp1 others(5): Show HG01884.hp2 HG02717.hp1 HG02809.hp1 HG02818.hp2 HG02896.hp1 HG02897.hp2 HG03579.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0050 a0001c0001t0001g0068 a0001c0001t0001g0069 others(5): Show a0001c0001t0001g0050 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0081 a0001c0001t0001g0089 a0001c0001t0001g0090	8	310	0.0258	-26	c.-29 others(37): Show c.-2975_-2950delAAAAAAAAAAAAAAAAAAAAAACAAA	CYP39A1	ENSG00000146233.8	transcript	ENST00000275016.3	protein_coding		2714		chr6	TogoVar
CYP3A5_chr7_99643194_99684996	99671117	TTGTGTGT others(19): Show TTGTGTGTGTGTGTGTGTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02451.hp2 HG02615.hp1 others(14): Show HG02257.hp1 HG02451.hp2 HG02615.hp1 HG02630.hp1 HG02717.hp1 HG02723.hp2 HG02809.hp1 HG02895.hp1 HG02965.hp1 HG03130.hp1 HG03139.hp1 HG03453.hp1 HG03486.hp1 HG03540.hp2 NA18522.hp2 NA19043.hp2 NA20129.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0001c0001t0002 a0002c0003t0001 a0001c0001t0001 a0001c0001t0002 a0002c0003t0001	a0001c0001t0001g0190 a0001c0001t0002g0021 a0001c0001t0002g0060 others(5): Show a0001c0001t0001g0190 a0001c0001t0002g0021 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0002c0003t0001g0002 a0002c0003t0001g0014 a0002c0003t0001g0058	17	292	0.0582	-26	c.318 others(43): Show c.318+1437_318+1462delCACACACACACACACACACACACACA	CYP3A5	ENSG00000106258.16	transcript	ENST00000222982.8	protein_coding	4/12			chr7	TogoVar
CYP4F11_chr19_15907377_15939529	15921032	GTCTCTCT others(19): Show GTCTCTCTCTCTCTCTCTTTCTGTCTC	G G	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG02109.hp1 HG03209.hp1 others(1): Show HG01109.hp2 HG02109.hp1 HG03209.hp1 NA20300.hp2	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0040 a0001c0006t0107 a0001c0006t0108 a0001c0006t0040 a0001c0006t0107 a0001c0006t0108	a0001c0006t0040g0126 a0001c0006t0040g0127 a0001c0006t0107g0124 others(1): Show a0001c0006t0040g0126 a0001c0006t0040g0127 a0001c0006t0107g0124 a0001c0006t0108g0128	4	386	0.0104	-26	c.111 others(44): Show c.1115+979_1115+1004delGAGACAGAAAGAGAGAGAGAGAGAGA	CYP4F11	ENSG00000171903.17	transcript	ENST00000402119.9	protein_coding	8/11			chr19	TogoVar
CYP4F11_chr19_15907377_15939529	15921054	GTCTCTCT others(19): Show GTCTCTCTCTCTCTCTCTCTCTCTCTC	G G	intron_variant intron_variant	MODIFIER	HG03225.hp2 HG03491.hp1 HG03492.hp2 HG03225.hp2 HG03491.hp1 HG03492.hp2	a0001 a0002 a0001 a0002	a0001c0004 a0002c0001 a0001c0004 a0002c0001	a0001c0004t0022 a0002c0001t0039 a0001c0004t0022 a0002c0001t0039	a0001c0004t0022g0050 a0002c0001t0039g0333 a0002c0001t0039g0334 a0001c0004t0022g0050 a0002c0001t0039g0333 a0002c0001t0039g0334	3	386	0.0078	-26	c.111 others(43): Show c.1115+957_1115+982delGAGAGAGAGAGAGAGAGAGAGAGAGA	CYP4F11	ENSG00000171903.17	transcript	ENST00000402119.9	protein_coding	8/11			chr19	TogoVar

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