Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

Chr

Snpeff genename

Sampleids

Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Samplehapid

No_hapid

No_samplehapid

Start

End

Minac

Maxac

Minlen

Maxlen

Sort By

Order by

regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
OR2T34_chr1_248568801_248579757	248578985	TATATATA others(19): Show TATATATATATATATACACACACACAC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02155.hp1 NA18943.hp1 NA19075.hp1 HG02155.hp1 NA18943.hp1 NA19075.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0000 a0002c0002t0001g0000	3	314	0.0096	-26	c.-42 others(37): Show c.-4254_-4229delGTGTGTGTGTGTATATATATATATAT	OR2T34	ENSG00000183310.3	transcript	ENST00000328782.3	protein_coding		4229		chr1	TogoVar
OR3A3_chr17_3406370_3429070	3421832	TCATATAT others(19): Show TCATATATAGTATACCACATGGTGATA	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03491.hp1 HG03492.hp2 HG03491.hp1 HG03492.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0019 a0001c0001t0019	a0001c0001t0019g0041 a0001c0001t0019g0041	2	440	0.0046	-26	c.30 others(35): Show c.302_*327delTATATAGTATACCACATGGTGATACA	OR3A3	ENSG00000159961.3	transcript	ENST00000641141.1	protein_coding	3/3	302	INFO_REALIGN_3_PRIME	chr17	TogoVar
OR4C13_chr11_49947391_49958419	49950019	TTGTGTGT others(19): Show TTGTGTGTGTGTGTGTGTGTGTGTGTG	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03130.hp1 HG06807.hp2 HG03130.hp1 HG06807.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0001 a0003c0004t0001	a0003c0004t0001g0000 a0003c0004t0001g0000	2	445	0.0045	-26	c.-24 others(37): Show c.-2403_-2378delTGTGTGTGTGTGTGTGTGTGTGTGTG	OR4C13	ENSG00000258817.1	transcript	ENST00000555099.1	protein_coding		2371		chr11	TogoVar
OR4Q3_chr14_19738571_19754469	19739187	TTTTCTTT others(19): Show TTTTCTTTCTTTCTTTCTTTTTCTTTC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00408.hp2 HG00558.hp2 HG00597.hp1 others(35): Show HG00408.hp2 HG00558.hp2 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00642.hp1 HG00738.hp1 HG01123.hp1 HG01975.hp2 HG02004.hp1 HG02015.hp2 HG04204.hp2 NA18612.hp1 NA18939.hp2 NA18940.hp1 NA18949.hp2 NA18956.hp1 NA18957.hp1 NA18964.hp2 NA18968.hp1 NA18971.hp1 NA18974.hp2 NA18984.hp1 NA18986.hp1 NA18992.hp1 NA18998.hp2 NA19010.hp1 NA19057.hp2 NA19059.hp1 NA19064.hp2 NA19072.hp1 NA19074.hp1 NA19078.hp2 NA19086.hp2 NA19087.hp1 NA19088.hp2 NA19090.hp1 homoSapiens_chm13v2.hp1	a0001 a0012 a0014 a0001 a0012 a0014	a0001c0001 a0012c0011 a0014c0017 a0001c0001 a0012c0011 a0014c0017	a0001c0001t0002 a0001c0001t0004 a0001c0001t0007 others(2): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0007 a0012c0011t0002 a0014c0017t0004	a0001c0001t0002g0001 a0001c0001t0002g0002 a0001c0001t0004g0002 others(3): Show a0001c0001t0002g0001 a0001c0001t0002g0002 a0001c0001t0004g0002 a0001c0001t0007g0002 a0012c0011t0002g0002 a0014c0017t0004g0002	38	276	0.1377	-26	c.-44 others(37): Show c.-4482_-4457delTTTCTTTCTTTCTTTCTTTTTCTTTC	OR4Q3	ENSG00000182652.4	transcript	ENST00000642117.2	protein_coding		4383		chr14	TogoVar
OR5D18_chr11_55814630_55825571	55815753	CTCTCTCT others(19): Show CTCTCTCTCTCTCTCTCTCTCTATATA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01981.hp1 HG01981.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	434	0.0023	-26	c.-38 others(37): Show c.-3876_-3851delTCTCTCTCTCTCTCTCTCTCTATATA	OR5D18	ENSG00000186119.9	transcript	ENST00000333976.7	protein_coding		3876		chr11	TogoVar
OR5D18_chr11_55814630_55825571	55815757	CTCTCTCT others(19): Show CTCTCTCTCTCTCTCTCTATATATATA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02965.hp1 NA18991.hp2 HG02965.hp1 NA18991.hp2	a0001 a0002 a0001 a0002	a0001c0006 a0002c0002 a0001c0006 a0002c0002	a0001c0006t0001 a0002c0002t0001 a0001c0006t0001 a0002c0002t0001	a0001c0006t0001g0000 a0002c0002t0001g0000 a0001c0006t0001g0000 a0002c0002t0001g0000	2	434	0.0046	-26	c.-38 others(37): Show c.-3872_-3847delTCTCTCTCTCTCTCTCTATATATATA	OR5D18	ENSG00000186119.9	transcript	ENST00000333976.7	protein_coding		3872		chr11	TogoVar
OR5D18_chr11_55814630_55825571	55815767	CTCTCTCT others(19): Show CTCTCTCTATATATATATATATATATA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02717.hp1 HG03486.hp2 HG02717.hp1 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	2	434	0.0046	-26	c.-38 others(37): Show c.-3862_-3837delTCTCTCTATATATATATATATATATA	OR5D18	ENSG00000186119.9	transcript	ENST00000333976.7	protein_coding		3862		chr11	TogoVar
OR5D18_chr11_55814630_55825571	55815769	CTCTCTAT others(19): Show CTCTCTATATATATATATATATATATA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02145.hp1 HG02145.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	434	0.0023	-26	c.-38 others(37): Show c.-3860_-3835delTCTCTATATATATATATATATATATA	OR5D18	ENSG00000186119.9	transcript	ENST00000333976.7	protein_coding		3860		chr11	TogoVar
OR5H14_chr3_98142479_98161614	98153558	AGGGAACA others(19): Show AGGGAACAGAGTGAGACACTGTCTCAG	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG04204.hp2 HG04204.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0039 a0001c0001t0039	a0001c0001t0039g0003 a0001c0001t0039g0003	1	430	0.0023	-26	c.32 others(37): Show c.3241_*3266delGGGAACAGAGTGAGACACTGTCTCAG	OR5H14	ENSG00000236032.3	transcript	ENST00000641380.1	protein_coding	2/2	3241		chr3	TogoVar
OR5H6_chr3_98259244_98270356	98267367	GTATATAT others(19): Show GTATATATATATATATATATATATATA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00438.hp1 HG00673.hp1 HG01515.hp1 others(12): Show HG00438.hp1 HG00673.hp1 HG01515.hp1 HG01517.hp1 HG02056.hp2 HG02080.hp2 NA18943.hp1 NA18962.hp1 NA18985.hp1 NA18985.hp2 NA19005.hp1 NA19062.hp1 NA19063.hp1 NA19070.hp1 NA19075.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0000 a0001c0001t0002g0000	15	442	0.0339	-26	c.21 others(37): Show c.2106_*2131delTATATATATATATATATATATATATA	OR5H6	ENSG00000230301.6	transcript	ENST00000615035.3	protein_coding		2012		chr3	TogoVar
OR5L1_chr11_55806367_55817476	55815753	CTCTCTCT others(19): Show CTCTCTCTCTCTCTCTCTCTCTATATA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01981.hp1 HG01981.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	440	0.0023	-26	c.33 others(37): Show c.3352_*3377delTCTCTCTCTCTCTCTCTCTCTATATA	OR5L1	ENSG00000279395.3	transcript	ENST00000625203.2	protein_coding		3278		chr11	TogoVar
OR5L1_chr11_55806367_55817476	55815757	CTCTCTCT others(19): Show CTCTCTCTCTCTCTCTCTATATATATA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02965.hp1 NA18991.hp2 HG02965.hp1 NA18991.hp2	a0001 a0006 a0001 a0006	a0001c0001 a0006c0005 a0001c0001 a0006c0005	a0001c0001t0001 a0006c0005t0005 a0001c0001t0001 a0006c0005t0005	a0001c0001t0001g0000 a0006c0005t0005g0000 a0001c0001t0001g0000 a0006c0005t0005g0000	2	440	0.0046	-26	c.33 others(37): Show c.3356_*3381delTCTCTCTCTCTCTCTCTATATATATA	OR5L1	ENSG00000279395.3	transcript	ENST00000625203.2	protein_coding		3282		chr11	TogoVar
OR5L1_chr11_55806367_55817476	55815765	CTCTCTCT others(19): Show CTCTCTCTCTATATATATATATATATA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02622.hp2 HG02622.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	440	0.0023	-26	c.33 others(37): Show c.3364_*3389delTCTCTCTCTATATATATATATATATA	OR5L1	ENSG00000279395.3	transcript	ENST00000625203.2	protein_coding		3290		chr11	TogoVar
OR5L1_chr11_55806367_55817476	55815767	CTCTCTCT others(19): Show CTCTCTCTATATATATATATATATATA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02717.hp1 HG03486.hp2 HG02717.hp1 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	2	440	0.0046	-26	c.33 others(37): Show c.3366_*3391delTCTCTCTATATATATATATATATATA	OR5L1	ENSG00000279395.3	transcript	ENST00000625203.2	protein_coding		3292		chr11	TogoVar
OR5L1_chr11_55806367_55817476	55815769	CTCTCTAT others(19): Show CTCTCTATATATATATATATATATATA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02145.hp1 HG02145.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0000 a0003c0003t0001g0000	1	440	0.0023	-26	c.33 others(37): Show c.3368_*3393delTCTCTATATATATATATATATATATA	OR5L1	ENSG00000279395.3	transcript	ENST00000625203.2	protein_coding		3294		chr11	TogoVar
OR5M1_chr11_56604236_56619874	56614234	GGAGCACA others(19): Show GGAGCACACATTATAATAGAGGGAGCA	G G	intron_variant intron_variant	MODIFIER	NA19062.hp2 NA19062.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0071 a0001c0001t0001g0071	1	386	0.0026	-26	c.-18 others(41): Show c.-18+597_-18+622delTGCTCCCTCTATTATAATGTGTGCTC	OR5M1	ENSG00000255012.3	transcript	ENST00000641076.1	protein_coding	1/1			chr11	TogoVar
OR6J1_chr14_22625929_22649352	22636371	CCTCTCCC others(19): Show CCTCTCCCTCTCCCTCTCCCTCTCCCT	C C	intron_variant intron_variant	MODIFIER	NA18977.hp2 NA18977.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0163 a0002c0002t0002g0163	1	362	0.0028	-26	c.-27 others(43): Show c.-27-1559_-27-1534delAGGGAGAGGGAGAGGGAGAGGGAGAG	OR6J1	ENSG00000255804.2	transcript	ENST00000540461.2	protein_coding	1/1			chr14	TogoVar
OR7A10_chr19_14835466_14853922	14849436	TTCTTCTT others(19): Show TTCTTCTTCTTCTTCTTTCTTCTTCTC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19081.hp2 NA19081.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0058 a0001c0001t0001g0058	1	488	0.0021	-26	c.-97 others(35): Show c.-975_-950delGAGAAGAAGAAAGAAGAAGAAGAAGA	OR7A10	ENSG00000127515.3	transcript	ENST00000641129.1	protein_coding		515		chr19	TogoVar
OR7A17_chr19_14873203_14891132	14873875	CCCCAGAC others(19): Show CCCCAGACAAGACAGTAAGAAGAAGTG	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19055.hp1 NA19055.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0090 a0001c0003t0090	a0001c0003t0090g0080 a0001c0003t0090g0080	1	444	0.0023	-26	c.65 others(37): Show c.6525_*6550delCACTTCTTCTTACTGTCTTGTCTGGG	OR7A17	ENSG00000185385.5	transcript	ENST00000641113.1	protein_coding		4327		chr19	TogoVar
OR8U3_chr11_56412258_56423232	56419487	CATATATA others(19): Show CATATATATATATATATATATATATAT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02976.hp2 HG03471.hp2 HG02976.hp2 HG03471.hp2	a0002 a0013 a0002 a0013	a0002c0012 a0013c0013 a0002c0012 a0013c0013	a0002c0012t0001 a0013c0013t0001 a0002c0012t0001 a0013c0013t0001	a0002c0012t0001g0000 a0013c0013t0001g0000 a0002c0012t0001g0000 a0013c0013t0001g0000	2	442	0.0045	-26	c.-12 others(37): Show c.-1281_-1256delATATATATATATATATATATATATAT	OR8U3	ENSG00000279961.2	transcript	ENST00000623286.1	protein_coding		1256		chr11	TogoVar
OR8U3_chr11_56412258_56423232	56419501	TATATATA others(19): Show TATATATATATATATATATATATATAC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02132.hp1 HG02615.hp1 HG02622.hp1 others(9): Show HG02132.hp1 HG02615.hp1 HG02622.hp1 HG02717.hp2 HG03225.hp1 HG03453.hp1 HG03453.hp2 HG03486.hp2 HG03516.hp1 HG03579.hp2 NA19030.hp2 NA19043.hp1	a0002 a0006 a0011 a0002 a0006 a0011	a0002c0002 a0006c0005 a0011c0010 a0002c0002 a0006c0005 a0011c0010	a0002c0002t0001 a0006c0005t0001 a0011c0010t0001 a0002c0002t0001 a0006c0005t0001 a0011c0010t0001	a0002c0002t0001g0000 a0006c0005t0001g0000 a0011c0010t0001g0000 a0002c0002t0001g0000 a0006c0005t0001g0000 a0011c0010t0001g0000	12	442	0.0272	-26	c.-12 others(37): Show c.-1295_-1270delGTATATATATATATATATATATATAT	OR8U3	ENSG00000279961.2	transcript	ENST00000623286.1	protein_coding		1270		chr11	TogoVar
OR8U3_chr11_56412258_56423232	56419503	TATATATA others(19): Show TATATATATATATATATATATATACAC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00642.hp1 HG00642.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0000 a0002c0002t0001g0000	1	442	0.0023	-26	c.-12 others(37): Show c.-1297_-1272delGTGTATATATATATATATATATATAT	OR8U3	ENSG00000279961.2	transcript	ENST00000623286.1	protein_coding		1272		chr11	TogoVar
OR9K2_chr12_55121406_55137750	55128975	GGAGGGAG others(19): Show GGAGGGAGAGGATCAGGAAAAATAACT	G G	intron_variant intron_variant	MODIFIER	HG03139.hp2 HG03139.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0011 a0002c0002t0003g0011	1	370	0.0027	-26	c.-9- others(39): Show c.-9-850_-9-825delGAGGGAGAGGATCAGGAAAAATAACT	OR9K2	ENSG00000170605.7	transcript	ENST00000641329.1	protein_coding	2/2			chr12	TogoVar
OR9Q1_chr11_58018881_58186616	58037679	ATATATAT others(19): Show ATATATATATATTTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01346.hp2 HG01358.hp2 HG02896.hp1 others(3): Show HG01346.hp2 HG01358.hp2 HG02896.hp1 HG02897.hp2 NA19056.hp1 NA19062.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0005 a0001c0002t0001 a0001c0001t0001 a0001c0001t0005 a0001c0002t0001	a0001c0001t0001g0262 a0001c0001t0001g0263 a0001c0001t0001g0264 others(3): Show a0001c0001t0001g0262 a0001c0001t0001g0263 a0001c0001t0001g0264 a0001c0001t0005g0260 a0001c0002t0001g0298 a0001c0002t0001g0299	6	324	0.0185	-26	c.-93 others(45): Show c.-93+13577_-93+13602delATATATATATTTTTTTTTTTTTTTTT	OR9Q1	ENSG00000186509.4	transcript	ENST00000335397.3	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr11	TogoVar
OR9Q1_chr11_58018881_58186616	58037681	ATATATAT others(19): Show ATATATATATTTTTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01934.hp2 HG02622.hp2 NA18985.hp2 HG01934.hp2 HG02622.hp2 NA18985.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0006 a0001c0001t0001 a0001c0002t0006	a0001c0001t0001g0317 a0001c0001t0001g0318 a0001c0002t0006g0289 a0001c0001t0001g0317 a0001c0001t0001g0318 a0001c0002t0006g0289	3	324	0.0093	-26	c.-93 others(45): Show c.-93+13579_-93+13604delATATATATTTTTTTTTTTTTTTTTTT	OR9Q1	ENSG00000186509.4	transcript	ENST00000335397.3	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr11	TogoVar
OR9Q1_chr11_58018881_58186616	58037683	ATATATAT others(19): Show ATATATATTTTTTTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	NA20805.hp1 NA20805.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0281 a0001c0002t0001g0281	1	324	0.0031	-26	c.-93 others(45): Show c.-93+13581_-93+13606delATATATTTTTTTTTTTTTTTTTTTTT	OR9Q1	ENSG00000186509.4	transcript	ENST00000335397.3	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr11	TogoVar
OSBPL10_chr3_31655825_31986262	31812720	AAGAAAGA others(19): Show AAGAAAGAAAGAAAGAAAGAAAGAAAG	A A	intron_variant intron_variant	MODIFIER	HG01981.hp1 HG01981.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0130 a0002c0003t0001g0130	1	186	0.0054	-26	c.729 others(45): Show c.729+17294_729+17319delCTTTCTTTCTTTCTTTCTTTCTTTCT	OSBPL10	ENSG00000144645.16	transcript	ENST00000396556.7	protein_coding	4/11			chr3	TogoVar
OSBPL10_chr3_31655825_31986262	31837318	AAATTATA others(19): Show AAATTATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG04184.hp1 HG04184.hp1	a0003 a0003	a0003c0013 a0003c0013	a0003c0013t0001 a0003c0013t0001	a0003c0013t0001g0011 a0003c0013t0001g0011	1	186	0.0054	-26	c.538 others(43): Show c.538-7113_538-7088delATATATATATATATATATATATAATT	OSBPL10	ENSG00000144645.16	transcript	ENST00000396556.7	protein_coding	3/11			chr3	TogoVar
OSBPL10_chr3_31655825_31986262	31837321	TTATATAT others(19): Show TTATATATATATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG06807.hp2 HG06807.hp2	a0005 a0005	a0005c0032 a0005c0032	a0005c0032t0001 a0005c0032t0001	a0005c0032t0001g0096 a0005c0032t0001g0096	1	186	0.0054	-26	c.538 others(43): Show c.538-7116_538-7091delTATATATATATATATATATATATATA	OSBPL10	ENSG00000144645.16	transcript	ENST00000396556.7	protein_coding	3/11			chr3	TogoVar
OSBPL10_chr3_31655825_31986262	31837352	TATATATA others(19): Show TATATATATATATATATATATATAGTA	T T	intron_variant intron_variant	MODIFIER	NA19086.hp1 NA19086.hp1	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0002 a0002c0004t0002	a0002c0004t0002g0077 a0002c0004t0002g0077	1	186	0.0054	-26	c.538 others(43): Show c.538-7147_538-7122delTACTATATATATATATATATATATAT	OSBPL10	ENSG00000144645.16	transcript	ENST00000396556.7	protein_coding	3/11			chr3	TogoVar
OSBPL10_chr3_31655825_31986262	31856069	TACACACA others(19): Show TACACACACACACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	NA19011.hp1 NA19011.hp1	a0007 a0007	a0007c0035 a0007c0035	a0007c0035t0001 a0007c0035t0001	a0007c0035t0001g0103 a0007c0035t0001g0103	1	186	0.0054	-26	c.537 others(45): Show c.537+20338_537+20363delGTGTGTGTGTGTGTGTGTGTGTGTGT	OSBPL10	ENSG00000144645.16	transcript	ENST00000396556.7	protein_coding	3/11			chr3	TogoVar
OSBPL5_chr11_3082107_3170310	3111969	GCATATGT others(19): Show GCATATGTGTGCGCGCATGTGTGTGCA	G G	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00733.hp2 HG01074.hp1 others(16): Show HG00323.hp2 HG00733.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01109.hp1 HG01361.hp1 HG01361.hp2 HG01993.hp2 HG02273.hp1 HG02976.hp1 HG03098.hp2 HG03225.hp2 HG03516.hp1 HG04115.hp2 HG04184.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0005 others(3): Show a0001c0001 a0001c0002 a0001c0005 a0001c0020 a0001c0030 a0002c0003	a0001c0001t0002 a0001c0002t0002 a0001c0002t0008 others(8): Show a0001c0001t0002 a0001c0002t0002 a0001c0002t0008 a0001c0002t0010 a0001c0002t0013 a0001c0002t0020 a0001c0002t0024 a0001c0005t0008 a0001c0020t0019 a0001c0030t0002 a0002c0003t0003	a0001c0001t0002g0087 a0001c0001t0002g0142 a0001c0001t0002g0157 others(16): Show a0001c0001t0002g0087 a0001c0001t0002g0142 a0001c0001t0002g0157 a0001c0001t0002g0273 a0001c0002t0002g0113 a0001c0002t0008g0049 a0001c0002t0008g0091 a0001c0002t0008g0209 a0001c0002t0008g0216 a0001c0002t0008g0283 a0001c0002t0010g0050 a0001c0002t0013g0020 a0001c0002t0013g0140 a0001c0002t0020g0185 a0001c0002t0024g0163 a0001c0005t0008g0065 a0001c0020t0019g0064 a0001c0030t0002g0092 a0002c0003t0003g0098	19	326	0.0583	-26	c.692 others(43): Show c.692-4050_692-4025delTGCACACACATGCGCGCACACATATG	OSBPL5	ENSG00000021762.20	transcript	ENST00000263650.12	protein_coding	7/21			chr11	TogoVar
OSGEPL1_chr2_189741660_189767792	189742839	CACACACA others(19): Show CACACACACACACATTAGAATTACCTG	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18979.hp1 NA18979.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	358	0.0028	-26	c.43 others(37): Show c.4332_*4357delCAGGTAATTCTAATGTGTGTGTGTGT	OSGEPL1	ENSG00000128694.12	transcript	ENST00000264151.10	protein_coding		3820		chr2	TogoVar
OSGEPL1_chr2_189741660_189767792	189742905	GACACACA others(19): Show GACACACACACACACACACACACACAC	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02135.hp1 HG02135.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	358	0.0028	-26	c.42 others(37): Show c.4266_*4291delGTGTGTGTGTGTGTGTGTGTGTGTGT	OSGEPL1	ENSG00000128694.12	transcript	ENST00000264151.10	protein_coding		3754		chr2	TogoVar
OTOA_chr16_21658968_21765729	21709655	ACAAAGGG others(19): Show ACAAAGGGAATTTTTGGCACATGAAAG	A A	intron_variant intron_variant	MODIFIER	NA18955.hp2 NA18955.hp2	a0008 a0008	a0008c0007 a0008c0007	a0008c0007t0001 a0008c0007t0001	a0008c0007t0001g0223 a0008c0007t0001g0223	1	320	0.0031	-26	c.110 others(43): Show c.1105-231_1105-206delAAAGGGAATTTTTGGCACATGAAAGC	OTOA	ENSG00000155719.18	transcript	ENST00000646100.2	protein_coding	12/28		INFO_REALIGN_3_PRIME	chr16	TogoVar
OTOGL_chr12_80094537_80385880	80170193	GTGTGTGT others(19): Show GTGTGTGTGTGTGTGTGTGTGTATGTA	G G	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01243.hp1	a0017 a0017	a0017c0041 a0017c0041	a0017c0041t0004 a0017c0041t0004	a0017c0041t0004g0012 a0017c0041t0004g0012	1	168	0.0060	-26	c.-19 others(45): Show c.-19-39206_-19-39181delGTGTGTGTATGTATGTGTGTGTGTGT	OTOGL	ENSG00000165899.12	transcript	ENST00000547103.7	protein_coding	1/58		INFO_REALIGN_3_PRIME	chr12	TogoVar
OTOG_chr11_17542259_17651044	17613235	CTTTCTTT others(19): Show CTTTCTTTCTTTCTTTCTTTCTTTCTT	C C	intron_variant intron_variant	MODIFIER	HG03669.hp2 HG03669.hp2	a0016 a0016	a0016c0012 a0016c0012	a0016c0012t0001 a0016c0012t0001	a0016c0012t0001g0133 a0016c0012t0001g0133	1	268	0.0037	-26	c.643 others(43): Show c.6439-375_6439-350delTTCTTTCTTTCTTTCTTTCTTTCTTT	OTOG	ENSG00000188162.12	transcript	ENST00000399397.6	protein_coding	38/55		INFO_REALIGN_3_PRIME	chr11	TogoVar
OTOL1_chr3_161491808_161508942	161505362	TATATATA others(19): Show TATATATATATATATATATATATATAC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02886.hp2 HG03139.hp2 HG02886.hp2 HG03139.hp2	a0001 a0010 a0001 a0010	a0001c0001 a0010c0016 a0001c0001 a0010c0016	a0001c0001t0001 a0010c0016t0001 a0001c0001t0001 a0010c0016t0001	a0001c0001t0001g0020 a0010c0016t0001g0033 a0001c0001t0001g0020 a0010c0016t0001g0033	2	450	0.0044	-26	c.14 others(37): Show c.1421_*1446delATATATATATATATATATATATATAC	OTOL1	ENSG00000182447.4	transcript	ENST00000327928.4	protein_coding		1421		chr3	TogoVar
OTOP1_chr4_4183726_4231929	4220024	TATACGTA others(19): Show TATACGTATATATGTATACATATATAC	T T	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG03041.hp2 HG02965.hp2 HG03041.hp2	a0004 a0004	a0004c0006 a0004c0006	a0004c0006t0001 a0004c0006t0001	a0004c0006t0001g0124 a0004c0006t0001g0181 a0004c0006t0001g0124 a0004c0006t0001g0181	2	428	0.0047	-26	c.403 others(43): Show c.403+6412_403+6437delGTATATATGTATACATATATACGTAT	OTOP1	ENSG00000163982.6	transcript	ENST00000296358.5	protein_coding	1/5			chr4	TogoVar
OTOP1_chr4_4183726_4231929	4231617	GATCCACC others(19): Show GATCCACCCACCTCAGCCTCCCAAAGT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03139.hp2 HG03139.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0360 a0001c0001t0001g0360	1	428	0.0023	-26	c.-47 others(37): Show c.-4779_-4754delACTTTGGGAGGCTGAGGTGGGTGGAT	OTOP1	ENSG00000163982.6	transcript	ENST00000296358.5	protein_coding		4689		chr4	TogoVar
OTUD5_chrX_48917024_48962607	48941432	CAAAAAAA others(19): Show CAAAAAAAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA18960.hp1 NA18993.hp1 NA19007.hp1 others(3): Show NA18960.hp1 NA18993.hp1 NA19007.hp1 NA19011.hp1 NA19063.hp1 NA19085.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0155 a0001c0001t0001g0184 a0001c0001t0001g0003 a0001c0001t0001g0155 a0001c0001t0001g0184	6	266	0.0226	-26	c.688 others(43): Show c.688+2732_688+2757delTTTTTTTTTTTTTTTTTTTTTTTTTT	OTUD5	ENSG00000068308.15	transcript	ENST00000376488.8	protein_coding	2/8			chrX	TogoVar
OTUD7A_chr15_31470398_31875673	31753695	ATATATAT others(19): Show ATATATATTATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	NA18992.hp2 NA18993.hp1 NA19000.hp1 others(1): Show NA18992.hp2 NA18993.hp1 NA19000.hp1 NA19085.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0039 a0001c0002t0001 a0001c0002t0039	a0001c0002t0001g0196 a0001c0002t0001g0197 a0001c0002t0001g0199 others(1): Show a0001c0002t0001g0196 a0001c0002t0001g0197 a0001c0002t0001g0199 a0001c0002t0039g0198	4	244	0.0164	-26	c.-99 others(45): Show c.-99-96644_-99-96619delATATATATATATATATATAATATATA	OTUD7A	ENSG00000169918.10	transcript	ENST00000307050.6	protein_coding	1/12			chr15	TogoVar
OVCH1_chr12_29434853_29502686	29476755	GCACACAC others(19): Show GCACACACACACACACACACACACACA	G G	intron_variant intron_variant	MODIFIER	NA20752.hp2 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0239 a0001c0001t0001g0239	1	400	0.0025	-26	c.148 others(43): Show c.1482+321_1482+346delTGTGTGTGTGTGTGTGTGTGTGTGTG	OVCH1	ENSG00000187950.9	transcript	ENST00000537054.2	protein_coding	12/25			chr12	TogoVar
OVGP1_chr1_111409319_111432735	111428789	AATATATA others(19): Show AATATATATATATATATATATATATAT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01099.hp2 NA19043.hp2 HG01099.hp2 NA19043.hp2	a0008 a0008	a0008c0034 a0008c0036 a0008c0034 a0008c0036	a0008c0034t0001 a0008c0036t0001 a0008c0034t0001 a0008c0036t0001	a0008c0034t0001g0066 a0008c0036t0001g0067 a0008c0034t0001g0066 a0008c0036t0001g0067	2	424	0.0047	-26	c.-10 others(37): Show c.-1094_-1069delATATATATATATATATATATATATAT	OVGP1	ENSG00000085465.13	transcript	ENST00000369732.4	protein_coding		1055		chr1	TogoVar
OXR1_chr8_106265190_106757694	106405178	ATATATAT others(19): Show ATATATATATATATATATATATATAGT	A A	intron_variant intron_variant	MODIFIER	HG01433.hp2 HG01433.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0088 a0001c0002t0001g0088	1	172	0.0058	-26	c.23+ others(43): Show c.23+45543_23+45568delTATATATATATATATATATATATAGT	OXR1	ENSG00000164830.19	transcript	ENST00000517566.7	protein_coding	2/16			chr8	TogoVar
OXR1_chr8_106265190_106757694	106739075	TACACACA others(19): Show TACACACACACACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG00741.hp1	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0002 a0001c0009t0002	a0001c0009t0002g0077 a0001c0009t0002g0077	1	172	0.0058	-26	c.203 others(43): Show c.2038-363_2038-338delCACACACACACACACACACACACACA	OXR1	ENSG00000164830.19	transcript	ENST00000517566.7	protein_coding	12/16		INFO_REALIGN_3_PRIME	chr8	TogoVar
OXSR1_chr3_38160537_38260484	38161610	ATGTCATA others(19): Show ATGTCATATATTATGTATATTTCATAT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00408.hp2 HG01243.hp1 HG01943.hp1 others(6): Show HG00408.hp2 HG01243.hp1 HG01943.hp1 HG03491.hp2 HG03492.hp2 HG03540.hp1 HG03654.hp1 HG03688.hp1 NA18959.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0003 a0002c0002t0002 a0001c0001t0001 a0001c0001t0003 a0002c0002t0002	a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0003g0137 others(6): Show a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0003g0137 a0001c0001t0003g0163 a0001c0001t0003g0190 a0001c0001t0003g0241 a0001c0001t0003g0245 a0002c0002t0002g0214 a0002c0002t0002g0235	9	248	0.0363	-26	c.-42 others(37): Show c.-4266_-4241delTGTCATATATTATGTATATTTCATAT	OXSR1	ENSG00000172939.9	transcript	ENST00000311806.8	protein_coding		3926		chr3	TogoVar
OXSR1_chr3_38160537_38260484	38162072	ATTTCATA others(19): Show ATTTCATATATTATGTATATTTCATAT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00323.hp1 HG01943.hp1 HG01975.hp2 others(1): Show HG00323.hp1 HG01943.hp1 HG01975.hp2 NA18950.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0002 a0002c0002t0002g0003 a0002c0002t0002g0202 others(1): Show a0002c0002t0002g0002 a0002c0002t0002g0003 a0002c0002t0002g0202 a0002c0002t0002g0235	4	248	0.0161	-26	c.-38 others(37): Show c.-3804_-3779delTTTCATATATTATGTATATTTCATAT	OXSR1	ENSG00000172939.9	transcript	ENST00000311806.8	protein_coding		3464		chr3	TogoVar
OXSR1_chr3_38160537_38260484	38184903	CTTTTTTT others(19): Show CTTTTTTTTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01934.hp1 HG01934.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0021 a0002c0002t0021	a0002c0002t0021g0120 a0002c0002t0021g0120	1	248	0.0040	-26	c.183 others(43): Show c.183+1811_183+1836delTTTTTTTTTTTTTTTTTTTTTTTTTT	OXSR1	ENSG00000172939.9	transcript	ENST00000311806.8	protein_coding	2/17		INFO_REALIGN_3_PRIME	chr3	TogoVar
OXTR_chr3_8745381_8774613	8773106	CATATATA others(19): Show CATATATATCTATATATATCTATATAT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00639.hp2 HG01069.hp1 others(50): Show HG00099.hp1 HG00639.hp2 HG01069.hp1 HG01081.hp2 HG01167.hp1 HG01192.hp1 HG01255.hp1 HG01255.hp2 HG01257.hp2 HG01258.hp2 HG01358.hp2 HG01433.hp1 HG01496.hp1 HG01515.hp1 HG01516.hp2 HG01517.hp2 HG01891.hp2 HG02015.hp2 HG02257.hp2 HG02258.hp2 HG02451.hp2 HG02559.hp2 HG02683.hp2 HG02717.hp2 HG02735.hp2 HG02896.hp1 HG02897.hp1 HG02970.hp2 HG03139.hp2 HG03209.hp2 HG03453.hp2 HG03540.hp2 HG03579.hp2 HG03831.hp2 HG04115.hp1 NA18522.hp1 NA18522.hp2 NA18906.hp1 NA18950.hp2 NA18951.hp2 NA18955.hp2 NA18970.hp1 NA18982.hp2 NA18984.hp2 NA18990.hp1 NA18995.hp2 NA18997.hp1 NA19030.hp1 NA19058.hp1 NA19066.hp1 NA19087.hp2 NA20805.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0004 others(1): Show a0001c0001 a0001c0002 a0001c0004 a0002c0005	a0001c0001t0001 a0001c0001t0003 a0001c0001t0011 others(20): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0011 a0001c0001t0020 a0001c0001t0025 a0001c0001t0036 a0001c0002t0001 a0001c0002t0003 a0001c0002t0007 a0001c0002t0008 a0001c0002t0022 a0001c0002t0026 a0001c0002t0028 a0001c0002t0029 a0001c0002t0041 a0001c0002t0066 a0001c0004t0001 a0001c0004t0004 a0001c0004t0015 a0001c0004t0034 a0001c0004t0073 a0001c0004t0078 a0002c0005t0005	a0001c0001t0001g0033 a0001c0001t0001g0076 a0001c0001t0001g0078 others(45): Show a0001c0001t0001g0033 a0001c0001t0001g0076 a0001c0001t0001g0078 a0001c0001t0003g0065 a0001c0001t0011g0025 a0001c0001t0020g0062 a0001c0001t0025g0034 a0001c0001t0036g0086 a0001c0002t0001g0181 a0001c0002t0001g0182 a0001c0002t0003g0066 a0001c0002t0003g0068 a0001c0002t0003g0247 a0001c0002t0003g0248 a0001c0002t0003g0264 a0001c0002t0003g0269 a0001c0002t0007g0008 a0001c0002t0007g0244 a0001c0002t0007g0255 a0001c0002t0007g0265 a0001c0002t0008g0011 a0001c0002t0008g0028 a0001c0002t0022g0242 a0001c0002t0022g0251 a0001c0002t0026g0053 a0001c0002t0028g0249 a0001c0002t0029g0260 a0001c0002t0041g0172 a0001c0002t0066g0271 a0001c0004t0001g0189 a0001c0004t0004g0017 a0001c0004t0004g0032 a0001c0004t0004g0285 a0001c0004t0004g0293 a0001c0004t0004g0295 a0001c0004t0004g0296 a0001c0004t0004g0297 a0001c0004t0004g0300 a0001c0004t0004g0301 a0001c0004t0004g0304 a0001c0004t0004g0306 a0001c0004t0015g0072 a0001c0004t0015g0074 a0001c0004t0015g0307 a0001c0004t0034g0294 a0001c0004t0073g0290 a0001c0004t0078g0313 a0002c0005t0005g0007	53	474	0.1118	-26	c.-41 others(37): Show c.-4140_-4115delATATATAGATATATATAGATATATAT	OXTR	ENSG00000180914.11	transcript	ENST00000316793.8	protein_coding		3494		chr3	TogoVar

Search by Variant

Search

Search Results