regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SPATA5_chr4_122918078_123324433 | 123323086 | CATATATA others(21): Show |
C | downstream_gene_variant | MODIFIER | HG01109.hp1 HG01884.hp2 HG02630.hp1 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004a0001c0001t0043 | a0001c0001t0001g0171a0001c0001t0001g0173a0001c0001t0001g0175others(3): Show | 6 | 262 | 0.0229 | -28 | c.*90 others(39): Show |
SPATA5 | ENSG00000145375.9 | transcript | ENST00000274008.5 | protein_coding | 3654 | chr4 | TogoVar | ||||||
SPATA5_chr4_122918078_123324433 | 123323112 | CATATATA others(21): Show |
C | downstream_gene_variant | MODIFIER | HG02074.hp2 | a0001 | a0001c0001 | a0001c0001t0041 | a0001c0001t0041g0109 | 1 | 262 | 0.0038 | -28 | c.*90 others(39): Show |
SPATA5 | ENSG00000145375.9 | transcript | ENST00000274008.5 | protein_coding | 3680 | chr4 | TogoVar | ||||||
SPATA6L_chr9_4593316_4671480 | 4656478 | AAGGAAGG others(21): Show |
A | intron_variant | MODIFIER | HG01192.hp1 HG02109.hp2 NA19043.hp1 |
a0001 | a0001c0001a0001c0006 | a0001c0001t0015a0001c0001t0019a0001c0006t0048 | a0001c0001t0015g0138a0001c0001t0019g0151a0001c0006t0048g0091 | 3 | 408 | 0.0074 | -28 | c.178 others(43): Show |
SPATA6L | ENSG00000106686.18 | transcript | ENST00000682582.1 | protein_coding | 2/11 | chr9 | TogoVar | ||||||
SPATA6_chr1_48290373_48477204 | 48460717 | AAAATATA others(21): Show |
A | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00140.hp2 others(106): Show |
a0001a0002a0005 | a0001c0001a0002c0002a0005c0006 | a0001c0001t0006a0002c0002t0001a0002c0002t0005others(9): Show | a0001c0001t0006g0143a0001c0001t0006g0144a0001c0001t0006g0145others(106): Show | 109 | 322 | 0.3385 | -28 | c.52- others(43): Show |
SPATA6 | ENSG00000132122.12 | transcript | ENST00000371847.8 | protein_coding | 1/12 | chr1 | TogoVar | ||||||
SPATS1_chr6_44337650_44385179 | 44363652 | TTCCCTCC others(21): Show |
T | intron_variant | MODIFIER | HG00140.hp2 HG00408.hp1 HG00423.hp2 others(187): Show |
a0001a0002 | a0001c0001a0002c0002a0002c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(18): Show | a0001c0001t0001g0002a0001c0001t0001g0003a0001c0001t0001g0006others(148): Show | 190 | 392 | 0.4847 | -28 | c.574 others(45): Show |
SPATS1 | ENSG00000249481.7 | transcript | ENST00000674044.1 | protein_coding | 5/8 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
SPC25_chr2_168865891_168895430 | 168889034 | CATATATA others(21): Show |
C | intron_variant | MODIFIER | HG01261.hp2 HG02896.hp1 HG03195.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0027a0001c0001t0002g0178a0001c0001t0002g0179 | 5 | 360 | 0.0139 | -28 | c.199 others(43): Show |
SPC25 | ENSG00000152253.9 | transcript | ENST00000282074.7 | protein_coding | 3/6 | chr2 | TogoVar | ||||||
SPC25_chr2_168865891_168895430 | 168889064 | TATATACA others(21): Show |
T | intron_variant | MODIFIER | HG01517.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0180 | 1 | 360 | 0.0028 | -28 | c.199 others(43): Show |
SPC25 | ENSG00000152253.9 | transcript | ENST00000282074.7 | protein_coding | 3/6 | chr2 | TogoVar | ||||||
SPCS2_chr11_74944266_74984033 | 74955851 | AATATATA others(21): Show |
A | intron_variant | MODIFIER | HG03209.hp1 NA19030.hp1 |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0288a0001c0001t0002g0290 | 2 | 378 | 0.0053 | -28 | c.114 others(45): Show |
SPCS2 | ENSG00000118363.13 | transcript | ENST00000263672.11 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |||||
SPDYA_chr2_28805834_28855610 | 28819843 | AAAAAAAA others(21): Show |
A | intron_variant | MODIFIER | HG02451.hp2 HG02647.hp1 HG03139.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0008a0001c0001t0001g0011a0001c0001t0001g0012others(1): Show | 4 | 338 | 0.0118 | -28 | c.294 others(43): Show |
SPDYA | ENSG00000163806.16 | transcript | ENST00000334056.10 | protein_coding | 4/7 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
SPDYA_chr2_28805834_28855610 | 28819845 | AAAAAATA others(21): Show |
A | intron_variant | MODIFIER | NA19030.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0006 | 1 | 338 | 0.0030 | -28 | c.294 others(43): Show |
SPDYA | ENSG00000163806.16 | transcript | ENST00000334056.10 | protein_coding | 4/7 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
SPDYA_chr2_28805834_28855610 | 28819849 | AATATATA others(21): Show |
A | intron_variant | MODIFIER | HG01891.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0148 | 1 | 338 | 0.0030 | -28 | c.294 others(43): Show |
SPDYA | ENSG00000163806.16 | transcript | ENST00000334056.10 | protein_coding | 4/7 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
SPDYA_chr2_28805834_28855610 | 28846722 | TACACACA others(21): Show |
T | intron_variant | MODIFIER | HG02922.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0149 | 1 | 338 | 0.0030 | -28 | c.851 others(45): Show |
SPDYA | ENSG00000163806.16 | transcript | ENST00000334056.10 | protein_coding | 7/7 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
SPDYE10_chr7_73099008_73160431 | 73156132 | ACACACAC others(21): Show |
A | upstream_gene_variant | MODIFIER | HG01433.hp1 NA18951.hp2 |
a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0095a0001c0002t0001g0100 | 2 | 216 | 0.0093 | -28 | c.-14 others(39): Show |
SPDYE10 | ENSG00000274570.6 | transcript | ENST00000691996.1 | protein_coding | 702 | chr7 | TogoVar | ||||||
SPDYE10_chr7_73099008_73160431 | 73156139 | CTCTCTCT others(21): Show |
C | upstream_gene_variant | MODIFIER | NA21309.hp1 | a0003 | a0003c0006 | a0003c0006t0023 | a0003c0006t0023g0141 | 1 | 216 | 0.0046 | -28 | c.-14 others(39): Show |
SPDYE10 | ENSG00000274570.6 | transcript | ENST00000691996.1 | protein_coding | 709 | chr7 | TogoVar | ||||||
SPDYE21_chr7_67271941_67294005 | 67274831 | CAAAAAAA others(21): Show |
C | upstream_gene_variant | MODIFIER | HG00099.hp2 HG00408.hp2 HG00438.hp2 others(100): Show |
a0003a0014 | a0003c0003a0014c0016 | a0003c0003t0002a0003c0003t0011a0003c0003t0016others(2): Show | a0003c0003t0002g0002a0003c0003t0002g0006a0003c0003t0002g0016others(44): Show | 103 | 460 | 0.2239 | -28 | c.-26 others(39): Show |
SPDYE21 | ENSG00000230358.6 | transcript | ENST00000424157.4 | protein_coding | 2109 | chr7 | TogoVar | ||||||
SPECC1L_chr22_24265831_24422738 | 24270240 | TATACATA others(21): Show |
T | upstream_gene_variant | MODIFIER | HG02738.hp1 | a0006 | a0006c0006 | a0006c0006t0020 | a0006c0006t0020g0069 | 1 | 326 | 0.0031 | -28 | c.-88 others(37): Show |
SPECC1L | ENSG00000100014.20 | transcript | ENST00000314328.14 | protein_coding | 590 | chr22 | TogoVar | ||||||
SPECC1L_chr22_24265831_24422738 | 24270286 | TATACGTA others(21): Show |
T | upstream_gene_variant | MODIFIER | HG01346.hp1 HG01884.hp2 HG02818.hp2 |
a0001 | a0001c0001 | a0001c0001t0009 | a0001c0001t0009g0082a0001c0001t0009g0084a0001c0001t0009g0193 | 3 | 326 | 0.0092 | -28 | c.-83 others(37): Show |
SPECC1L | ENSG00000100014.20 | transcript | ENST00000314328.14 | protein_coding | 544 | chr22 | TogoVar | ||||||
SPECC1L_chr22_24265831_24422738 | 24270303 | GTATATAT others(21): Show |
G | upstream_gene_variant | MODIFIER | HG02280.hp2 | a0001 | a0001c0001 | a0001c0001t0013 | a0001c0001t0013g0282 | 1 | 326 | 0.0031 | -28 | c.-82 others(37): Show |
SPECC1L | ENSG00000100014.20 | transcript | ENST00000314328.14 | protein_coding | 527 | chr22 | TogoVar | ||||||
SPECC1_chr17_20004359_20324026 | 20019207 | CATTCATT others(21): Show |
C | intron_variant | MODIFIER | HG00140.hp2 HG01070.hp1 HG01099.hp2 others(28): Show |
a0003 | a0003c0004a0003c0007a0003c0012others(1): Show | a0003c0004t0003a0003c0004t0011a0003c0004t0016others(10): Show | a0003c0004t0003g0008a0003c0004t0003g0072a0003c0004t0003g0079others(28): Show | 31 | 250 | 0.1240 | -28 | c.-22 others(45): Show |
SPECC1 | ENSG00000128487.19 | transcript | ENST00000395527.9 | protein_coding | 1/14 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
SPECC1_chr17_20004359_20324026 | 20051113 | TTTCTTTC others(21): Show |
T | intron_variant | MODIFIER | HG02922.hp1 HG06807.hp1 |
a0001 | a0001c0001 | a0001c0001t0031a0001c0001t0098 | a0001c0001t0031g0180a0001c0001t0098g0179 | 2 | 250 | 0.0080 | -28 | c.-22 others(47): Show |
SPECC1 | ENSG00000128487.19 | transcript | ENST00000395527.9 | protein_coding | 1/14 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
SPECC1_chr17_20004359_20324026 | 20051121 | TTTCTTTC others(21): Show |
T | intron_variant | MODIFIER | HG02559.hp1 | a0001 | a0001c0003 | a0001c0003t0053 | a0001c0003t0053g0189 | 1 | 250 | 0.0040 | -28 | c.-22 others(47): Show |
SPECC1 | ENSG00000128487.19 | transcript | ENST00000395527.9 | protein_coding | 1/14 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
SPEM1_chr17_7415324_7426632 | 7424547 | TTTCCTTC others(21): Show |
T | downstream_gene_variant | MODIFIER | HG02970.hp2 NA19080.hp1 |
a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0001 | 2 | 398 | 0.0050 | -28 | c.*29 others(39): Show |
SPEM1 | ENSG00000181323.8 | transcript | ENST00000323675.4 | protein_coding | 2916 | chr17 | TogoVar | ||||||
SPEM2_chr17_7420616_7432568 | 7424547 | TTTCCTTC others(21): Show |
T | upstream_gene_variant | MODIFIER | HG02970.hp1 NA19080.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 2 | 364 | 0.0055 | -28 | c.-11 others(39): Show |
SPEM2 | ENSG00000184560.8 | transcript | ENST00000333870.8 | protein_coding | 1068 | chr17 | TogoVar | ||||||
SPEM3_chr17_7423857_7437820 | 7424547 | TTTCCTTC others(21): Show |
T | upstream_gene_variant | MODIFIER | HG02970.hp2 NA18993.hp1 NA19080.hp2 |
a0002a0009 | a0002c0002a0002c0009a0009c0010 | a0002c0002t0001a0002c0009t0001a0009c0010t0001 | a0002c0002t0001g0001a0002c0009t0001g0001a0009c0010t0001g0001 | 3 | 354 | 0.0085 | -28 | c.-43 others(39): Show |
SPEM3 | ENSG00000283439.4 | transcript | ENST00000636696.4 | protein_coding | 4309 | chr17 | TogoVar | ||||||
SPG7_chr16_89503403_89562766 | 89526901 | CCGAAGTC others(21): Show |
C | intron_variant | MODIFIER | HG03041.hp1 HG03453.hp2 NA20129.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0244a0001c0001t0001g0245a0001c0001t0001g0246 | 3 | 358 | 0.0084 | -28 | c.758 others(43): Show |
SPG7 | ENSG00000197912.16 | transcript | ENST00000645818.2 | protein_coding | 5/16 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |||||
SPIDR_chr8_47255938_47741306 | 47331965 | CTTTTTTT others(21): Show |
C | intron_variant | MODIFIER | HG02602.hp2 HG03225.hp2 HG03453.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0001a0001c0001t0003g0002a0001c0001t0003g0003others(1): Show | 4 | 216 | 0.0185 | -28 | c.525 others(47): Show |
SPIDR | ENSG00000164808.17 | transcript | ENST00000297423.9 | protein_coding | 5/19 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
SPIDR_chr8_47255938_47741306 | 47588026 | CATATATA others(21): Show |
C | intron_variant | MODIFIER | HG02056.hp2 NA18983.hp1 NA18998.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0091a0001c0001t0001g0092a0001c0001t0001g0112others(1): Show | 4 | 216 | 0.0185 | -28 | c.109 others(47): Show |
SPIDR | ENSG00000164808.17 | transcript | ENST00000297423.9 | protein_coding | 8/19 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
SPINK5_chr5_148058980_148142382 | 148123512 | AATATATG others(21): Show |
A | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00280.hp1 others(157): Show |
a0001a0006a0007others(8): Show | a0001c0001a0001c0024a0001c0039others(12): Show | a0001c0001t0001a0001c0024t0001a0001c0039t0001others(14): Show | a0001c0001t0001g0003a0001c0001t0001g0008a0001c0001t0001g0023others(143): Show | 160 | 384 | 0.4167 | -28 | c.253 others(45): Show |
SPINK5 | ENSG00000133710.17 | transcript | ENST00000256084.8 | protein_coding | 26/32 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
SPOCK3_chr4_166728384_167239494 | 167078308 | CTGTGTGT others(21): Show |
C | intron_variant | MODIFIER | HG02258.hp2 HG02615.hp1 HG02965.hp1 others(4): Show |
a0001 | a0001c0001a0001c0008 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(2): Show | a0001c0001t0001g0108a0001c0001t0001g0109a0001c0001t0003g0042others(4): Show | 7 | 144 | 0.0486 | -28 | c.190 others(47): Show |
SPOCK3 | ENSG00000196104.11 | transcript | ENST00000357545.9 | protein_coding | 2/10 | chr4 | TogoVar | ||||||
SPON1_chr11_13957723_14273133 | 14113568 | ATTTTTTT others(21): Show |
A | intron_variant | MODIFIER | HG01243.hp2 HG02280.hp2 HG02559.hp2 others(6): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(2): Show | a0001c0001t0001g0013a0001c0001t0001g0017a0001c0001t0001g0032others(6): Show | 9 | 224 | 0.0402 | -28 | c.677 others(47): Show |
SPON1 | ENSG00000262655.4 | transcript | ENST00000576479.4 | protein_coding | 5/15 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |||||
SPON1_chr11_13957723_14273133 | 14161183 | TTATATAT others(21): Show |
T | intron_variant | MODIFIER | HG02165.hp1 NA18984.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0051a0001c0001t0002g0135 | 2 | 224 | 0.0089 | -28 | c.825 others(47): Show |
SPON1 | ENSG00000262655.4 | transcript | ENST00000576479.4 | protein_coding | 6/15 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |||||
SPOPL_chr2_138496770_138578547 | 138567372 | AGTGTGTG others(21): Show |
A | intron_variant | MODIFIER | HG00544.hp2 HG02040.hp2 HG02132.hp1 others(15): Show |
a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0001a0001c0001t0003g0051a0001c0001t0003g0151others(11): Show | 18 | 372 | 0.0484 | -28 | c.103 others(47): Show |
SPOPL | ENSG00000144228.9 | transcript | ENST00000280098.9 | protein_coding | 10/10 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
SPRED2_chr2_65305851_65437599 | 65342188 | ATATACGT others(21): Show |
A | intron_variant | MODIFIER | HG01167.hp2 HG01891.hp2 HG02055.hp1 others(32): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0002a0001c0001t0003a0001c0001t0006others(4): Show | a0001c0001t0002g0035a0001c0001t0002g0078a0001c0001t0002g0080others(32): Show | 35 | 276 | 0.1268 | -28 | c.204 others(45): Show |
SPRED2 | ENSG00000198369.10 | transcript | ENST00000356388.9 | protein_coding | 2/5 | chr2 | TogoVar | ||||||
SPRR5_chr1_152942206_152954255 | 152944616 | TGTGTGTG others(21): Show |
T | upstream_gene_variant | MODIFIER | HG00438.hp1 NA18971.hp1 NA18973.hp2 others(4): Show |
a0000a0001a0006 | a0000c0013a0001c0001a0006c0006 | a0000c0013t0006a0001c0001t0001a0006c0006t0006 | a0000c0013t0006g0011a0001c0001t0001g0002a0006c0006t0006g0010others(1): Show | 7 | 436 | 0.0161 | -28 | c.-26 others(39): Show |
SPRR5 | ENSG00000283227.2 | transcript | ENST00000636302.2 | protein_coding | 2589 | chr1 | TogoVar | ||||||
SPRTN_chr1_231333293_231360023 | 231359054 | TTATATAT others(21): Show |
T | downstream_gene_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00323.hp2 others(67): Show |
a0001a0002a0007others(2): Show | a0001c0001a0002c0002a0007c0012others(2): Show | a0001c0001t0001a0001c0001t0010a0001c0001t0012others(6): Show | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0009others(33): Show | 70 | 352 | 0.1989 | -28 | c.*56 others(39): Show |
SPRTN | ENSG00000010072.16 | transcript | ENST00000295050.12 | protein_coding | 4032 | chr1 | TogoVar | ||||||
SPRY3_chrX_155607586_155787459 | 155638293 | AATATATA others(21): Show |
A | intron_variant | MODIFIER | HG01884.hp2 HG03516.hp1 NA18906.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0063a0001c0001t0065a0001c0001t0073others(1): Show | a0001c0001t0063g0057a0001c0001t0065g0056a0001c0001t0073g0014others(1): Show | 4 | 231 | 0.0173 | -28 | c.-28 others(49): Show |
SPRY3 | ENSG00000168939.13 | transcript | ENST00000695325.1 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
SPSB1_chr1_9287894_9374532 | 9298379 | TGAATGAG others(21): Show |
T | intron_variant | MODIFIER | HG01070.hp2 HG01167.hp1 HG01175.hp1 others(29): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(15): Show | a0001c0001t0001g0138a0001c0001t0001g0155a0001c0001t0001g0156others(29): Show | 32 | 370 | 0.0865 | -28 | c.-15 others(47): Show |
SPSB1 | ENSG00000171621.14 | transcript | ENST00000328089.11 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
SPSB1_chr1_9287894_9374532 | 9357089 | GTGGATGG others(21): Show |
G | intron_variant | MODIFIER | HG00280.hp2 HG00423.hp1 HG00438.hp1 others(94): Show |
a0001a0003 | a0001c0001a0003c0005 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(12): Show | a0001c0001t0001g0031a0001c0001t0001g0042a0001c0001t0001g0060others(94): Show | 97 | 370 | 0.2622 | -28 | c.694 others(43): Show |
SPSB1 | ENSG00000171621.14 | transcript | ENST00000328089.11 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
SPTBN5_chr15_41843146_41899053 | 41862062 | ATGAGAGG others(21): Show |
A | intron_variant | MODIFIER | HG00099.hp1 HG00544.hp1 HG01192.hp2 others(14): Show |
a0013a0015a0024others(8): Show | a0013c0015a0015c0014a0024c0123others(9): Show | a0013c0015t0002a0015c0014t0002a0024c0123t0001others(9): Show | a0013c0015t0002g0010a0013c0015t0002g0227a0013c0015t0002g0228others(12): Show | 17 | 396 | 0.0429 | -28 | c.754 others(43): Show |
SPTBN5 | ENSG00000137877.10 | transcript | ENST00000320955.8 | protein_coding | 44/67 | chr15 | TogoVar | ||||||
SPTLC3_chr20_13003972_13174103 | 13067044 | CATATATA others(21): Show |
C | intron_variant | MODIFIER | HG02109.hp2 | a0001 | a0001c0001 | a0001c0001t0007 | a0001c0001t0007g0239 | 1 | 292 | 0.0034 | -28 | c.304 others(45): Show |
SPTLC3 | ENSG00000172296.13 | transcript | ENST00000399002.7 | protein_coding | 2/11 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
SPTLC3_chr20_13003972_13174103 | 13100957 | CCAGGAAG others(21): Show |
C | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp2 HG00323.hp1 others(80): Show |
a0001a0002a0003 | a0001c0001a0001c0003a0001c0004others(4): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(38): Show | a0001c0001t0001g0052a0001c0001t0001g0093a0001c0001t0001g0095others(80): Show | 83 | 292 | 0.2843 | -28 | c.826 others(45): Show |
SPTLC3 | ENSG00000172296.13 | transcript | ENST00000399002.7 | protein_coding | 6/11 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
SRBD1_chr2_45383680_45616267 | 45414718 | ATACACAC others(21): Show |
A | intron_variant | MODIFIER | HG00544.hp1 HG02132.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0029a0001c0001t0001g0045 | 2 | 358 | 0.0056 | -28 | c.233 others(47): Show |
SRBD1 | ENSG00000068784.13 | transcript | ENST00000263736.5 | protein_coding | 18/20 | chr2 | TogoVar | ||||||
SRBD1_chr2_45383680_45616267 | 45467161 | ATTGATGC others(21): Show |
A | intron_variant | MODIFIER | HG02647.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0223 | 1 | 358 | 0.0028 | -28 | c.204 others(47): Show |
SRBD1 | ENSG00000068784.13 | transcript | ENST00000263736.5 | protein_coding | 16/20 | chr2 | TogoVar | ||||||
SRC_chr20_37341140_37411050 | 37373428 | TGTATATA others(21): Show |
T | intron_variant | MODIFIER | HG00408.hp2 HG00438.hp1 HG00609.hp1 others(84): Show |
a0001 | a0001c0001a0001c0003a0001c0004others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(24): Show | a0001c0001t0001g0016a0001c0001t0001g0049a0001c0001t0001g0050others(83): Show | 87 | 282 | 0.3085 | -28 | c.-17 others(47): Show |
SRC | ENSG00000197122.13 | transcript | ENST00000373578.7 | protein_coding | 2/13 | chr20 | TogoVar | ||||||
SRF_chr6_43166269_43186506 | 43182522 | AGCTCACC others(21): Show |
A | downstream_gene_variant | MODIFIER | HG01258.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 1 | 356 | 0.0028 | -28 | c.*33 others(39): Show |
SRF | ENSG00000112658.8 | transcript | ENST00000265354.6 | protein_coding | 1017 | chr6 | TogoVar | ||||||
SRGAP1_chr12_63839700_64167217 | 63868046 | ATATATAT others(21): Show |
A | intron_variant | MODIFIER | HG03831.hp2 | a0002 | a0002c0004 | a0002c0004t0154 | a0002c0004t0154g0076 | 1 | 170 | 0.0059 | -28 | c.67+ others(45): Show |
SRGAP1 | ENSG00000196935.10 | transcript | ENST00000355086.8 | protein_coding | 1/21 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
SRGAP1_chr12_63839700_64167217 | 63868048 | ATATATAT others(21): Show |
A | intron_variant | MODIFIER | HG02056.hp1 NA18979.hp2 NA19084.hp2 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0106a0001c0001t0118a0001c0002t0063 | a0001c0001t0106g0067a0001c0001t0118g0078a0001c0002t0063g0060 | 3 | 170 | 0.0177 | -28 | c.67+ others(45): Show |
SRGAP1 | ENSG00000196935.10 | transcript | ENST00000355086.8 | protein_coding | 1/21 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
SRGAP1_chr12_63839700_64167217 | 63948885 | TATATATA others(21): Show |
T | intron_variant | MODIFIER | HG00408.hp1 HG00558.hp1 HG00639.hp2 others(54): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0003others(5): Show | a0001c0001t0006a0001c0001t0007a0001c0001t0021others(51): Show | a0001c0001t0006g0112a0001c0001t0006g0154a0001c0001t0007g0039others(54): Show | 57 | 170 | 0.3353 | -28 | c.68- others(45): Show |
SRGAP1 | ENSG00000196935.10 | transcript | ENST00000355086.8 | protein_coding | 1/21 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
SRGAP1_chr12_63839700_64167217 | 63983797 | AATATATA others(21): Show |
A | intron_variant | MODIFIER | HG01109.hp2 HG02630.hp2 HG02896.hp1 others(2): Show |
a0001 | a0001c0001a0001c0006 | a0001c0001t0081a0001c0001t0115a0001c0001t0148others(2): Show | a0001c0001t0081g0164a0001c0001t0115g0142a0001c0001t0148g0116others(2): Show | 5 | 170 | 0.0294 | -28 | c.68- others(40): Show |
SRGAP1 | ENSG00000196935.10 | transcript | ENST00000355086.8 | protein_coding | 1/21 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
SRGAP2B_chr1_144882288_145100328 | 145044650 | TAAAAAAA others(21): Show |
T | intron_variant | MODIFIER | HG00280.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0050 | 1 | 56 | 0.0179 | -28 | c.67+ others(45): Show |
SRGAP2B | ENSG00000196369.12 | transcript | ENST00000641863.3 | protein_coding | 2/9 | chr1 | TogoVar |