Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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Select column to sort.

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Results per page.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CCDC3_chr10_12891625_13006713	12983128	GTGTATAT others(21): Show GTGTATATATATATATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG01081.hp1 NA18962.hp2 NA18966.hp2 others(4): Show HG01081.hp1 NA18962.hp2 NA18966.hp2 NA18968.hp1 NA18997.hp1 NA19002.hp1 NA19010.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0002 a0001c0001t0003	a0001c0001t0002g0047 a0001c0001t0002g0050 a0001c0001t0002g0212 others(4): Show a0001c0001t0002g0047 a0001c0001t0002g0050 a0001c0001t0002g0212 a0001c0001t0002g0270 a0001c0001t0003g0048 a0001c0001t0003g0049 a0001c0001t0003g0160	7	392	0.0179	-28	c.549 others(47): Show c.549+15182_549+15209delTATATATATATATATATATATATATA CA	CCDC3	ENSG00000151468.11	transcript	ENST00000378825.5	protein_coding	2/2			chr10	TogoVar
CCDC40_chr17_80031642_80105613	80090369	CGAACACA others(21): Show CGAACACAGGACACACACAGCACGTGCAT	C C	intron_variant intron_variant	MODIFIER	HG02970.hp2 HG02970.hp2	a0015 a0015	a0015c0030 a0015c0030	a0015c0030t0003 a0015c0030t0003	a0015c0030t0003g0188 a0015c0030t0003g0188	1	378	0.0027	-28	c.283 others(45): Show c.2832+491_2832+518delCAGGACACACACAGCACGTGCATGAACA	CCDC40	ENSG00000141519.15	transcript	ENST00000397545.9	protein_coding	17/19		INFO_REALIGN_3_PRIME	chr17	TogoVar
CCDC47_chr17_63740255_63778597	63759508	AATATATA others(21): Show AATATATATATATATATATTTATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02809.hp1 HG02809.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0244 a0001c0001t0006g0244	1	352	0.0028	-28	c.735 others(45): Show c.735+1378_735+1405delATATATATAAATATATATATATATATAT	CCDC47	ENSG00000108588.15	transcript	ENST00000225726.10	protein_coding	6/12			chr17	TogoVar
CCDC57_chr17_82096470_82217842	82138634	AGTCGGAA others(21): Show AGTCGGAAGAGACGCATGGCCTGCCCCGG	A A	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02572.hp1 HG02647.hp1 others(6): Show HG02109.hp2 HG02572.hp1 HG02647.hp1 HG02717.hp1 HG02886.hp1 HG02895.hp1 HG02897.hp1 HG03139.hp1 NA20300.hp2	a0006 a0007 a0006 a0007	a0006c0010 a0007c0011 a0006c0010 a0007c0011	a0006c0010t0001 a0007c0011t0002 a0006c0010t0001 a0007c0011t0002	a0006c0010t0001g0010 a0006c0010t0001g0011 a0006c0010t0001g0012 others(6): Show a0006c0010t0001g0010 a0006c0010t0001g0011 a0006c0010t0001g0012 a0006c0010t0001g0013 a0006c0010t0001g0014 a0007c0011t0002g0015 a0007c0011t0002g0016 a0007c0011t0002g0017 a0007c0011t0002g0018	9	252	0.0357	-28	c.245 others(47): Show c.2456-4468_2456-4441delCCGGGGCAGGCCATGCGTCTCTTCCG AC	CCDC57	ENSG00000176155.21	transcript	ENST00000694881.1	protein_coding	15/18			chr17	TogoVar
CCDC57_chr17_82096470_82217842	82138649	ATGGCCTG others(21): Show ATGGCCTGCCCCGGGTCGGAAGAGACGCG	A A	intron_variant intron_variant	MODIFIER	HG01070.hp2 HG01070.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0204 a0002c0002t0001g0204	1	252	0.0040	-28	c.245 others(47): Show c.2456-4483_2456-4456delCGCGTCTCTTCCGACCCGGGGCAGGC CA	CCDC57	ENSG00000176155.21	transcript	ENST00000694881.1	protein_coding	15/18			chr17	TogoVar
CCDC60_chr12_119329729_119546040	119456040	AAAGAAAG others(21): Show AAAGAAAGAAAGAAAGAAAGAAAGCAAGC	A A	intron_variant intron_variant	MODIFIER	NA20905.hp2 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0042 a0001c0001t0001g0042	1	256	0.0039	-28	c.171 others(47): Show c.171-15950_171-15923delAAAGAAAGAAAGAAAGAAAGCAAGCA AG	CCDC60	ENSG00000183273.7	transcript	ENST00000327554.3	protein_coding	2/13		INFO_REALIGN_3_PRIME	chr12	TogoVar
CCDC60_chr12_119329729_119546040	119507563	TATATATG others(21): Show TATATATGTATATATACACATATATATAC	T T	intron_variant intron_variant	MODIFIER	HG02647.hp2 NA18943.hp2 HG02647.hp2 NA18943.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0007 a0001c0001t0002 a0001c0001t0007	a0001c0001t0002g0145 a0001c0001t0007g0016 a0001c0001t0002g0145 a0001c0001t0007g0016	2	256	0.0078	-28	c.883 others(45): Show c.883+2267_883+2294delGTATATATACACATATATATACATATAT	CCDC60	ENSG00000183273.7	transcript	ENST00000327554.3	protein_coding	7/13		INFO_REALIGN_3_PRIME	chr12	TogoVar
CCDC63_chr12_110841987_110912535	110888786	TTTCCTTC others(21): Show TTTCCTTCCTTCCTTCCTTCCTTCCTTCC	T T	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02896.hp2 HG03540.hp2 HG02622.hp2 HG02896.hp2 HG03540.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0166 a0001c0001t0001g0183 a0001c0001t0001g0184 a0001c0001t0001g0166 a0001c0001t0001g0183 a0001c0001t0001g0184	3	288	0.0104	-28	c.107 others(47): Show c.1075-4242_1075-4215delCTTCCTTCCTTCCTTCCTTCCTTCCT TC	CCDC63	ENSG00000173093.13	transcript	ENST00000308208.10	protein_coding	8/11		INFO_REALIGN_3_PRIME	chr12	TogoVar
CCDC68_chr18_54896509_54964461	54941462	CACTACAA others(21): Show CACTACAAAATAATTACTACCTAGTAATT	C C	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG01074.hp2 HG01081.hp2 others(21): Show HG00738.hp1 HG01074.hp2 HG01081.hp2 HG01106.hp1 HG01169.hp1 HG01175.hp1 HG01192.hp1 HG01256.hp2 HG01258.hp2 HG01261.hp2 HG01516.hp1 HG01517.hp2 HG02451.hp2 HG02559.hp2 HG02896.hp2 HG02897.hp1 HG03139.hp2 HG03491.hp2 HG03492.hp2 HG03831.hp2 HG03927.hp1 NA18522.hp1 NA19030.hp2 NA20752.hp1	a0001 a0005 a0001 a0005	a0001c0001 a0005c0009 a0001c0001 a0005c0009	a0001c0001t0001 a0001c0001t0004 a0001c0001t0011 others(2): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0011 a0001c0001t0026 a0005c0009t0004	a0001c0001t0001g0231 a0001c0001t0001g0241 a0001c0001t0004g0001 others(19): Show a0001c0001t0001g0231 a0001c0001t0001g0241 a0001c0001t0004g0001 a0001c0001t0004g0030 a0001c0001t0004g0232 a0001c0001t0004g0233 a0001c0001t0004g0234 a0001c0001t0004g0238 a0001c0001t0004g0239 a0001c0001t0004g0240 a0001c0001t0004g0243 a0001c0001t0004g0244 a0001c0001t0004g0247 a0001c0001t0004g0248 a0001c0001t0004g0249 a0001c0001t0004g0250 a0001c0001t0004g0251 a0001c0001t0004g0252 a0001c0001t0011g0230 a0001c0001t0011g0245 a0001c0001t0026g0017 a0005c0009t0004g0242	24	326	0.0736	-28	c.118 others(43): Show c.118-407_118-380delAATTACTAGGTAGTAATTATTTTGTAGT	CCDC68	ENSG00000166510.14	transcript	ENST00000591504.6	protein_coding	3/11			chr18	TogoVar
CCDC71L_chr7_106649360_106666158	106649703	AGAAGGAA others(21): Show AGAAGGAAGGAAGGAAGGAAGGAAGGAAG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00323.hp2 HG00408.hp2 HG00423.hp1 others(168): Show HG00323.hp2 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp2 HG00597.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00673.hp2 HG00735.hp2 HG01070.hp1 HG01106.hp1 HG01123.hp2 HG01167.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01361.hp2 HG01433.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01517.hp2 HG01928.hp1 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01952.hp1 HG01952.hp2 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp2 HG02004.hp1 HG02004.hp2 HG02040.hp1 HG02040.hp2 HG02056.hp1 HG02071.hp1 HG02071.hp2 HG02080.hp1 HG02083.hp1 HG02129.hp2 HG02148.hp2 HG02155.hp1 HG02165.hp1 HG02165.hp2 HG02273.hp2 HG02293.hp2 HG02523.hp1 HG02523.hp2 HG02602.hp1 HG02602.hp2 HG02698.hp2 HG02738.hp2 HG02896.hp2 HG02897.hp2 HG03017.hp1 HG03098.hp2 HG03471.hp1 HG03516.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp2 HG03704.hp1 HG04115.hp2 HG06807.hp2 NA18612.hp2 NA18747.hp2 NA18906.hp2 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18946.hp2 NA18947.hp1 NA18950.hp1 NA18950.hp2 NA18952.hp2 NA18953.hp1 NA18954.hp1 NA18954.hp2 NA18956.hp1 NA18960.hp1 NA18960.hp2 NA18961.hp2 NA18963.hp1 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18971.hp1 NA18973.hp1 NA18975.hp1 NA18975.hp2 NA18979.hp1 NA18980.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp2 NA18988.hp1 NA18988.hp2 NA18990.hp1 NA18991.hp1 NA18991.hp2 NA18992.hp1 NA18992.hp2 NA18993.hp2 NA18995.hp1 NA18995.hp2 NA18998.hp1 NA18999.hp1 NA18999.hp2 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp2 NA19004.hp1 NA19005.hp2 NA19006.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp2 NA19011.hp2 NA19030.hp2 NA19054.hp1 NA19054.hp2 NA19055.hp1 NA19055.hp2 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19059.hp2 NA19060.hp1 NA19060.hp2 NA19065.hp1 NA19065.hp2 NA19067.hp1 NA19067.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp2 NA19075.hp1 NA19075.hp2 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19077.hp2 NA19078.hp2 NA19079.hp1 NA19079.hp2 NA19086.hp1 NA19087.hp1 NA19091.hp1 NA19091.hp2 NA20300.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0008 others(14): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0008 a0001c0001t0009 a0001c0001t0011 a0001c0001t0013 a0001c0001t0014 a0001c0001t0017 a0001c0001t0018 a0001c0001t0042 a0001c0001t0043 a0001c0001t0044 a0001c0001t0046 a0001c0001t0047 a0001c0001t0048 a0001c0001t0049 a0001c0001t0052	a0001c0001t0001g0000 a0001c0001t0003g0000 a0001c0001t0008g0000 others(14): Show a0001c0001t0001g0000 a0001c0001t0003g0000 a0001c0001t0008g0000 a0001c0001t0009g0000 a0001c0001t0011g0000 a0001c0001t0013g0000 a0001c0001t0014g0000 a0001c0001t0017g0000 a0001c0001t0018g0000 a0001c0001t0042g0000 a0001c0001t0043g0000 a0001c0001t0044g0000 a0001c0001t0046g0000 a0001c0001t0047g0000 a0001c0001t0048g0000 a0001c0001t0049g0000 a0001c0001t0052g0000	171	440	0.3886	-28	c.10 others(41): Show c.10458_*10485delCTTCCTTCCTTCCTTCCTTCCTTCCTTC	CCDC71L	ENSG00000253276.5	transcript	ENST00000523505.3	protein_coding		4656		chr7	TogoVar
CCDC73_chr11_32597721_32799662	32755979	CTATATAT others(21): Show CTATATATATATCTCCATATATATATCTA	C C	intron_variant intron_variant	MODIFIER	NA18993.hp1 NA19085.hp2 NA18993.hp1 NA19085.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0135 a0001c0003t0001g0138 a0001c0003t0001g0135 a0001c0003t0001g0138	2	312	0.0064	-28	c.135 others(45): Show c.135+4102_135+4129delTAGATATATATATGGAGATATATATATA	CCDC73	ENSG00000186714.13	transcript	ENST00000335185.10	protein_coding	2/17			chr11	TogoVar
CCDC77_chr12_396644_447642	415327	CATAATAT others(21): Show CATAATATTATGTTAATATAATCAACATA	C C	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG01074.hp2 HG01358.hp2 others(9): Show HG00408.hp1 HG01074.hp2 HG01358.hp2 HG02451.hp2 HG02735.hp1 HG03195.hp2 NA18963.hp2 NA18982.hp1 NA18999.hp1 NA19003.hp2 NA19080.hp2 NA19240.hp2	a0001 a0002 a0004 others(2): Show a0001 a0002 a0004 a0006 a0008	a0001c0001 a0002c0002 a0002c0009 others(3): Show a0001c0001 a0002c0002 a0002c0009 a0004c0004 a0006c0006 a0008c0013	a0001c0001t0002 a0002c0002t0001 a0002c0002t0002 others(5): Show a0001c0001t0002 a0002c0002t0001 a0002c0002t0002 a0002c0009t0001 a0004c0004t0001 a0004c0004t0002 a0006c0006t0012 a0008c0013t0004	a0001c0001t0002g0304 a0002c0002t0001g0184 a0002c0002t0002g0100 others(9): Show a0001c0001t0002g0304 a0002c0002t0001g0184 a0002c0002t0002g0100 a0002c0009t0001g0406 a0004c0004t0001g0207 a0004c0004t0002g0307 a0004c0004t0002g0309 a0004c0004t0002g0310 a0004c0004t0002g0311 a0004c0004t0002g0312 a0006c0006t0012g0104 a0008c0013t0004g0419	12	432	0.0278	-28	c.271 others(45): Show c.271-3163_271-3136delATATTATGTTAATATAATCAACATAATA	CCDC77	ENSG00000120647.10	transcript	ENST00000239830.9	protein_coding	4/12		INFO_REALIGN_3_PRIME	chr12	TogoVar
CCDC77_chr12_396644_447642	415383	ATTATGTT others(21): Show ATTATGTTAATATAATCAACATAATATGT	A A	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00423.hp2 HG00609.hp2 others(113): Show HG00280.hp2 HG00423.hp2 HG00609.hp2 HG00673.hp1 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01109.hp2 HG01123.hp2 HG01167.hp1 HG01256.hp1 HG01346.hp1 HG01433.hp2 HG01496.hp2 HG01516.hp2 HG01928.hp2 HG01934.hp1 HG01978.hp1 HG01981.hp1 HG02004.hp2 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02083.hp1 HG02155.hp1 HG02165.hp2 HG02273.hp1 HG02300.hp1 HG02615.hp2 HG02630.hp2 HG02647.hp2 HG02683.hp1 HG02698.hp1 HG02818.hp1 HG02970.hp2 HG03130.hp1 HG03209.hp1 HG03225.hp1 HG03471.hp1 HG03490.hp1 HG03492.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp2 HG03688.hp2 HG03710.hp2 HG03834.hp2 HG03927.hp1 HG03942.hp2 HG04199.hp1 HG04204.hp2 HG04228.hp1 NA18747.hp2 NA18941.hp1 NA18946.hp2 NA18948.hp1 NA18951.hp2 NA18952.hp1 NA18953.hp1 NA18953.hp2 NA18954.hp1 NA18956.hp2 NA18957.hp1 NA18964.hp1 NA18965.hp2 NA18966.hp2 NA18967.hp1 NA18967.hp2 NA18973.hp1 NA18978.hp1 NA18979.hp1 NA18981.hp2 NA18983.hp2 NA18986.hp1 NA18986.hp2 NA18988.hp2 NA18990.hp1 NA18991.hp2 NA18992.hp1 NA18993.hp1 NA18994.hp1 NA18995.hp2 NA18998.hp1 NA19000.hp2 NA19002.hp2 NA19003.hp1 NA19004.hp1 NA19005.hp2 NA19006.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp2 NA19012.hp1 NA19043.hp2 NA19054.hp1 NA19056.hp2 NA19057.hp2 NA19064.hp1 NA19065.hp2 NA19066.hp2 NA19068.hp2 NA19070.hp2 NA19074.hp1 NA19081.hp1 NA19082.hp1 NA19084.hp2 NA19085.hp1 NA19087.hp1 NA19088.hp1 NA19090.hp1 NA19091.hp1 NA19091.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0010 a0011	a0001c0001 a0002c0002 a0003c0003 others(4): Show a0001c0001 a0002c0002 a0003c0003 a0004c0004 a0004c0012 a0010c0010 a0011c0008	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(11): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0002c0002t0001 a0002c0002t0002 a0002c0002t0013 a0003c0003t0001 a0003c0003t0002 a0003c0003t0003 a0004c0004t0001 a0004c0004t0002 a0004c0012t0001 a0010c0010t0003 a0011c0008t0002	a0001c0001t0001g0398 a0001c0001t0002g0003 a0001c0001t0002g0037 others(110): Show a0001c0001t0001g0398 a0001c0001t0002g0003 a0001c0001t0002g0037 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0003g0002 a0001c0001t0003g0016 a0001c0001t0003g0018 a0001c0001t0003g0019 a0001c0001t0003g0020 a0001c0001t0003g0022 a0001c0001t0003g0023 a0001c0001t0003g0024 a0001c0001t0003g0025 a0001c0001t0003g0026 a0001c0001t0003g0027 a0001c0001t0003g0028 a0001c0001t0003g0029 a0001c0001t0003g0031 a0001c0001t0003g0033 a0001c0001t0003g0034 a0001c0001t0003g0035 a0001c0001t0003g0036 a0001c0001t0003g0039 a0001c0001t0003g0040 a0001c0001t0003g0044 a0001c0001t0003g0045 a0001c0001t0003g0046 a0001c0001t0003g0047 a0001c0001t0003g0048 a0001c0001t0003g0050 a0001c0001t0003g0052 a0001c0001t0003g0053 a0001c0001t0003g0054 a0001c0001t0003g0057 a0001c0001t0003g0059 a0001c0001t0003g0060 a0001c0001t0003g0061 a0001c0001t0003g0077 a0001c0001t0003g0080 a0001c0001t0003g0099 a0001c0001t0003g0125 a0001c0001t0003g0127 a0001c0001t0003g0181 a0001c0001t0003g0225 a0001c0001t0003g0226 a0001c0001t0003g0246 a0001c0001t0003g0247 a0002c0002t0001g0005 a0002c0002t0001g0038 a0002c0002t0001g0051 a0002c0002t0001g0094 a0002c0002t0001g0109 a0002c0002t0001g0110 a0002c0002t0001g0112 a0002c0002t0001g0115 a0002c0002t0001g0117 a0002c0002t0001g0118 a0002c0002t0001g0119 a0002c0002t0001g0120 a0002c0002t0001g0121 a0002c0002t0001g0122 a0002c0002t0001g0123 a0002c0002t0001g0126 a0002c0002t0001g0128 a0002c0002t0001g0130 a0002c0002t0001g0149 a0002c0002t0001g0152 a0002c0002t0001g0169 a0002c0002t0001g0234 a0002c0002t0001g0235 a0002c0002t0001g0237 a0002c0002t0001g0264 a0002c0002t0001g0268 a0002c0002t0001g0280 a0002c0002t0001g0308 a0002c0002t0001g0316 a0002c0002t0001g0321 a0002c0002t0001g0322 a0002c0002t0001g0336 a0002c0002t0001g0354 a0002c0002t0001g0360 a0002c0002t0002g0083 a0002c0002t0002g0113 a0002c0002t0002g0145 a0002c0002t0002g0162 a0002c0002t0002g0350 a0002c0002t0002g0351 a0002c0002t0002g0355 a0002c0002t0013g0363 a0003c0003t0001g0070 a0003c0003t0002g0063 a0003c0003t0002g0081 a0003c0003t0002g0382 a0003c0003t0003g0069 a0004c0004t0001g0064 a0004c0004t0001g0065 a0004c0004t0001g0071 a0004c0004t0001g0072 a0004c0004t0001g0096 a0004c0004t0001g0139 a0004c0004t0001g0142 a0004c0004t0001g0186 a0004c0004t0001g0187 a0004c0004t0001g0191 a0004c0004t0001g0192 a0004c0004t0001g0306 a0004c0004t0001g0340 a0004c0004t0001g0375 a0004c0004t0002g0097 a0004c0012t0001g0416 a0010c0010t0003g0076 a0011c0008t0002g0101	116	432	0.2685	-28	c.271 others(45): Show c.271-3109_271-3082delTATGTTAATATAATCAACATAATATGTT	CCDC77	ENSG00000120647.10	transcript	ENST00000239830.9	protein_coding	4/12		INFO_REALIGN_3_PRIME	chr12	TogoVar
CCDC77_chr12_396644_447642	446474	TATGTAAT others(21): Show TATGTAATACACAACATAAATGGCATGAA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18959.hp1 NA18959.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0068 a0003c0003t0001g0068	1	432	0.0023	-28	c.45 others(39): Show c.4555_*4582delATGTAATACACAACATAAATGGCATGAA	CCDC77	ENSG00000120647.10	transcript	ENST00000239830.9	protein_coding		3833		chr12	TogoVar
CCDC7_chr10_32441140_32887864	32461701	GTGTGTGT others(21): Show GTGTGTGTGTATATATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	NA18960.hp2 NA18960.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0160 a0001c0002t0001g0160	1	368	0.0027	-28	c.457 others(43): Show c.457-978_457-951delGTGTGTATATATATATATATATATATGT	CCDC7	ENSG00000216937.14	transcript	ENST00000639629.2	protein_coding	4/43		INFO_REALIGN_3_PRIME	chr10	TogoVar
CCDC80_chr3_112591797_112646143	112595854	ATATCTAT others(21): Show ATATCTATCTATCTATCTATCTATCTATC	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01243.hp1 HG02486.hp2 HG02622.hp1 others(5): Show HG01243.hp1 HG02486.hp2 HG02622.hp1 HG02723.hp1 HG03130.hp2 HG03579.hp1 NA19030.hp2 NA20300.hp1	a0003 a0004 a0009 a0003 a0004 a0009	a0003c0003 a0004c0006 a0009c0012 a0003c0003 a0004c0006 a0009c0012	a0003c0003t0023 a0003c0003t0077 a0003c0003t0109 others(3): Show a0003c0003t0023 a0003c0003t0077 a0003c0003t0109 a0004c0006t0079 a0004c0006t0080 a0009c0012t0078	a0003c0003t0023g0139 a0003c0003t0023g0141 a0003c0003t0023g0142 others(5): Show a0003c0003t0023g0139 a0003c0003t0023g0141 a0003c0003t0023g0142 a0003c0003t0077g0140 a0003c0003t0109g0254 a0004c0006t0079g0050 a0004c0006t0080g0051 a0009c0012t0078g0049	8	380	0.0211	-28	c.95 others(39): Show c.9535_*9562delGATAGATAGATAGATAGATAGATAGATA	CCDC80	ENSG00000091986.16	transcript	ENST00000206423.8	protein_coding		942		chr3	TogoVar
CCDC83_chr11_85850383_85925013	85908584	TAGATAGA others(21): Show TAGATAGATAGATAGATAGATAGATAGAC	T T	intron_variant intron_variant	MODIFIER	HG01978.hp2 HG01978.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0002 a0002c0003t0002	a0002c0003t0002g0155 a0002c0003t0002g0155	1	334	0.0030	-28	c.673 others(45): Show c.673-2689_673-2662delTAGATAGATAGATAGATAGACAGATAGA	CCDC83	ENSG00000150676.13	transcript	ENST00000342404.8	protein_coding	7/10		INFO_REALIGN_3_PRIME	chr11	TogoVar
CCDC85A_chr2_56178990_56391172	56389517	AATATATA others(21): Show AATATATATATATATATATATATATATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02602.hp2 HG02602.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0269 a0001c0001t0001g0269	1	308	0.0033	-28	c.51 others(39): Show c.5163_*5190delATATATATATATATATATATATATATAT	CCDC85A	ENSG00000055813.6	transcript	ENST00000407595.3	protein_coding		3346		chr2	TogoVar
CCDC88A_chr2_55282842_55424856	55375489	ATATATAT others(21): Show ATATATATATATATATATATATATGTATG	A A	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02895.hp2 HG02897.hp2 others(2): Show HG02572.hp1 HG02895.hp2 HG02897.hp2 HG02922.hp2 HG03834.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0004 a0001c0002t0035 a0001c0001t0002 a0001c0001t0004 a0001c0002t0035	a0001c0001t0002g0109 a0001c0001t0004g0123 a0001c0001t0004g0140 others(2): Show a0001c0001t0002g0109 a0001c0001t0004g0123 a0001c0001t0004g0140 a0001c0001t0004g0141 a0001c0002t0035g0127	5	316	0.0158	-28	c.274 others(43): Show c.274-634_274-607delCATACATATATATATATATATATATATA	CCDC88A	ENSG00000115355.18	transcript	ENST00000436346.7	protein_coding	3/32			chr2	TogoVar
CCDC88A_chr2_55282842_55424856	55384534	TATATACG others(21): Show TATATACGTATATATGTGTATATATACAC	T T	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG02717.hp1	a0007 a0007	a0007c0013 a0007c0013	a0007c0013t0039 a0007c0013t0039	a0007c0013t0039g0090 a0007c0013t0039g0090	1	316	0.0032	-28	c.273 others(45): Show c.273+4216_273+4243delGTGTATATATACACATATATACGTATAT	CCDC88A	ENSG00000115355.18	transcript	ENST00000436346.7	protein_coding	3/32			chr2	TogoVar
CCDC88A_chr2_55282842_55424856	55401478	GTATGTAT others(21): Show GTATGTATGTGTGTGTGTATACATATATA	G G	intron_variant intron_variant	MODIFIER	HG02809.hp1 NA20129.hp2 NA20300.hp2 HG02809.hp1 NA20129.hp2 NA20300.hp2	a0001 a0006 a0001 a0006	a0001c0001 a0006c0011 a0001c0001 a0006c0011	a0001c0001t0016 a0006c0011t0006 a0001c0001t0016 a0006c0011t0006	a0001c0001t0016g0028 a0001c0001t0016g0029 a0006c0011t0006g0010 a0001c0001t0016g0028 a0001c0001t0016g0029 a0006c0011t0006g0010	3	316	0.0095	-28	c.165 others(47): Show c.165-12620_165-12593delTATATATGTATACACACACACATACA TA	CCDC88A	ENSG00000115355.18	transcript	ENST00000436346.7	protein_coding	2/32			chr2	TogoVar
CCDC88A_chr2_55282842_55424856	55416427	AATAAATA others(21): Show AATAAATAAATAAATAAATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG04204.hp2 HG04204.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0180 a0001c0001t0002g0180	1	316	0.0032	-28	c.164 others(45): Show c.164+2361_164+2388delATATATATATATTTATTTATTTATTTAT	CCDC88A	ENSG00000115355.18	transcript	ENST00000436346.7	protein_coding	2/32			chr2	TogoVar
CCDC88C_chr14_91266323_91422820	91275648	TTTGTATC others(21): Show TTTGTATCTTTAGTAGAGATGGGGTTTCA	T T	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG01175.hp1 HG03704.hp2 HG00741.hp1 HG01175.hp1 HG03704.hp2	a0007 a0007	a0007c0040 a0007c0044 a0007c0052 a0007c0040 a0007c0044 a0007c0052	a0007c0040t0011 a0007c0044t0015 a0007c0052t0011 a0007c0040t0011 a0007c0044t0015 a0007c0052t0011	a0007c0040t0011g0054 a0007c0044t0015g0011 a0007c0052t0011g0166 a0007c0040t0011g0054 a0007c0044t0015g0011 a0007c0052t0011g0166	3	284	0.0106	-28	c.505 others(47): Show c.5059-2023_5059-1996delTGAAACCCCATCTCTACTAAAGATAC AA	CCDC88C	ENSG00000015133.20	transcript	ENST00000389857.11	protein_coding	29/29			chr14	TogoVar
CCDC91_chr12_28185456_28555166	28267824	TTAATATA others(21): Show TTAATATATAATTATATATAATTATATAG	T T	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG03471.hp2 HG02258.hp1 HG03471.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0108 a0001c0001t0002g0109 a0001c0001t0002g0108 a0001c0001t0002g0109	2	242	0.0083	-28	c.109 others(45): Show c.109+8410_109+8437delGTAATATATAATTATATATAATTATATA	CCDC91	ENSG00000123106.11	transcript	ENST00000536442.6	protein_coding	3/12		INFO_REALIGN_3_PRIME	chr12	TogoVar
CCDC9_chr19_47251525_47276953	47254442	TATATATA others(21): Show TATATATATATATATATATATATATATAC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01168.hp2 NA18948.hp1 NA18992.hp1 others(1): Show HG01168.hp2 NA18948.hp1 NA18992.hp1 NA19074.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0003 a0001c0002t0006 a0001c0002t0001 a0001c0002t0003 a0001c0002t0006	a0001c0002t0001g0029 a0001c0002t0001g0106 a0001c0002t0003g0113 others(1): Show a0001c0002t0001g0029 a0001c0002t0001g0106 a0001c0002t0003g0113 a0001c0002t0006g0003	4	402	0.0100	-28	c.-22 others(39): Show c.-2238_-2211delATATATATATATATATATATATATATAC	CCDC9	ENSG00000105321.14	transcript	ENST00000221922.11	protein_coding		2082		chr19	TogoVar
CCKAR_chr4_26476396_26495484	26492543	TTCTTTTC others(21): Show TTCTTTTCCTTCCTTCCTTCCTTCCTTCC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02922.hp2 HG02922.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0094 a0001c0001t0001g0094	1	454	0.0022	-28	c.-23 others(39): Show c.-2304_-2277delGGAAGGAAGGAAGGAAGGAAGGAAAAGA	CCKAR	ENSG00000163394.6	transcript	ENST00000295589.4	protein_coding		2060		chr4	TogoVar
CCKAR_chr4_26476396_26495484	26492547	TTTCCTTC others(21): Show TTTCCTTCCTTCCTTCCTTCCTTCCTTCC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03098.hp2 HG03098.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0059 a0001c0001t0002g0059	1	454	0.0022	-28	c.-23 others(39): Show c.-2308_-2281delGGAAGGAAGGAAGGAAGGAAGGAAGGAA	CCKAR	ENSG00000163394.6	transcript	ENST00000295589.4	protein_coding		2064		chr4	TogoVar
CCK_chr3_42252826_42271185	42266836	TTTCCTTC others(21): Show TTTCCTTCCTTCCTTCCTTCCTTCCTTCC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01074.hp2 HG02486.hp2 HG02572.hp1 others(4): Show HG01074.hp2 HG02486.hp2 HG02572.hp1 HG02970.hp1 HG03130.hp1 HG03195.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0010 a0001c0001t0007 a0001c0001t0010	a0001c0001t0007g0019 a0001c0001t0007g0050 a0001c0001t0010g0051 a0001c0001t0007g0019 a0001c0001t0007g0050 a0001c0001t0010g0051	7	430	0.0163	-28	c.-15 others(39): Show c.-1563_-1536delGGAAGGAAGGAAGGAAGGAAGGAAGGAA	CCK	ENSG00000187094.12	transcript	ENST00000396169.7	protein_coding		652		chr3	TogoVar
CCL17_chr16_57399767_57421063	57403116	TTATAATA others(21): Show TTATAATATATATAATATATATTATTATC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00558.hp1 HG00597.hp2 HG01109.hp1 others(15): Show HG00558.hp1 HG00597.hp2 HG01109.hp1 HG01346.hp2 HG02300.hp2 HG02559.hp2 HG02922.hp1 HG02970.hp1 HG03130.hp2 NA18946.hp2 NA18979.hp1 NA18980.hp1 NA19002.hp2 NA19012.hp1 NA19068.hp1 NA19077.hp1 NA19084.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0028 a0001c0001t0001g0029 others(7): Show a0001c0001t0001g0002 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0040 a0001c0001t0001g0047 a0001c0001t0001g0050 a0001c0001t0001g0102 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111	18	388	0.0464	-28	c.-17 others(39): Show c.-1779_-1752delTATAATATATATAATATATATTATTATC	CCL17	ENSG00000102970.11	transcript	ENST00000219244.9	protein_coding		1650		chr16	TogoVar
CCL26_chr7_75764538_75777211	75776513	AAAGGAAG others(21): Show AAAGGAAGGAAGGAAGGAAGGAAGGAAGG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02486.hp1 HG02683.hp1 HG02486.hp1 HG02683.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	2	424	0.0047	-28	c.-43 others(39): Show c.-4365_-4338delCCTTCCTTCCTTCCTTCCTTCCTTCCTT	CCL26	ENSG00000006606.9	transcript	ENST00000005180.9	protein_coding		4303		chr7	TogoVar
CCN1_chr1_85575761_85588950	85580528	GACAGACA others(21): Show GACAGACACACACACAGACACACACACAC	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01952.hp1 HG01952.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0002	1	466	0.0022	-28	c.-45 others(37): Show c.-456_-429delACAGACACACACACAGACACACACACAC	CCN1	ENSG00000142871.18	transcript	ENST00000451137.7	protein_coding		232		chr1	TogoVar
CCN1_chr1_85575761_85588950	85580532	GACACACA others(21): Show GACACACACACAGACACACACACACACAC	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00408.hp2 HG01261.hp2 HG03490.hp1 HG00408.hp2 HG01261.hp2 HG03490.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0001 a0001c0001t0001g0002	3	466	0.0064	-28	c.-45 others(37): Show c.-452_-425delACACACACACAGACACACACACACACAC	CCN1	ENSG00000142871.18	transcript	ENST00000451137.7	protein_coding		228		chr1	TogoVar
CCN5_chr20_44710369_44732811	44712274	GGAAAGAA others(21): Show GGAAAGAAAGAAAGAAAGAAAGAAAGAAA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02809.hp1 HG02809.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0184 a0001c0001t0001g0184	1	446	0.0022	-28	c.-31 others(39): Show c.-3116_-3089delGAAAGAAAGAAAGAAAGAAAGAAAGAAA	CCN5	ENSG00000064205.11	transcript	ENST00000190983.5	protein_coding		3094		chr20	TogoVar
CCNA1_chr13_36427495_36447870	36433370	TTTTCTTT others(21): Show TTTTCTTTCTTTCTTTCTTTCTTTCTTTC	T T	intron_variant intron_variant	MODIFIER	HG00673.hp1 HG02040.hp1 HG02056.hp2 others(8): Show HG00673.hp1 HG02040.hp1 HG02056.hp2 HG02723.hp2 HG02809.hp1 HG03491.hp1 HG03579.hp2 NA18982.hp1 NA18989.hp2 NA19009.hp2 NA19088.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0005 a0001c0001t0001g0096 a0001c0001t0001g0005 a0001c0001t0001g0096	11	440	0.0250	-28	c.165 others(43): Show c.165+194_165+221delTTTCTTTCTTTCTTTCTTTCTTTCTTTC	CCNA1	ENSG00000133101.10	transcript	ENST00000255465.8	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr13	TogoVar
CCNB1IP1_chr14_20306370_20338279	20309300	TCCCTCTC others(21): Show TCCCTCTCCCCTCTCCCCTCTCCCCTCTC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00323.hp1 HG00544.hp1 HG01358.hp2 others(45): Show HG00323.hp1 HG00544.hp1 HG01358.hp2 HG01433.hp2 HG01891.hp1 HG01952.hp1 HG01978.hp2 HG01993.hp2 HG02027.hp1 HG02027.hp2 HG02080.hp1 HG02109.hp1 HG02165.hp2 HG02300.hp1 HG02451.hp1 HG02738.hp1 HG02922.hp1 HG02970.hp1 HG03130.hp2 HG03579.hp2 HG04199.hp2 HG06807.hp1 NA18522.hp1 NA18612.hp2 NA18747.hp2 NA18951.hp2 NA18961.hp1 NA18962.hp1 NA18964.hp1 NA18970.hp1 NA18972.hp1 NA18987.hp1 NA18994.hp2 NA18999.hp1 NA19001.hp2 NA19007.hp1 NA19060.hp2 NA19064.hp2 NA19068.hp1 NA19070.hp1 NA19074.hp1 NA19076.hp2 NA19084.hp2 NA19085.hp2 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0029 others(30): Show a0001c0002t0001g0002 a0001c0002t0001g0005 a0001c0002t0001g0029 a0001c0002t0001g0037 a0001c0002t0001g0049 a0001c0002t0001g0074 a0001c0002t0001g0128 a0001c0002t0001g0131 a0001c0002t0001g0132 a0001c0002t0001g0134 a0001c0002t0001g0136 a0001c0002t0001g0137 a0001c0002t0001g0138 a0001c0002t0001g0139 a0001c0002t0001g0140 a0001c0002t0001g0142 a0001c0002t0001g0143 a0001c0002t0001g0144 a0001c0002t0001g0145 a0001c0002t0001g0146 a0001c0002t0001g0147 a0001c0002t0001g0148 a0001c0002t0001g0154 a0001c0002t0001g0155 a0001c0002t0001g0173 a0001c0002t0001g0174 a0001c0002t0001g0189 a0001c0002t0001g0203 a0001c0002t0001g0204 a0001c0002t0001g0205 a0001c0002t0001g0206 a0001c0002t0001g0210 a0001c0002t0001g0211	48	418	0.1148	-28	c.22 others(39): Show c.2222_*2249delGAGAGGGGAGAGGGGAGAGGGGAGAGGG	CCNB1IP1	ENSG00000100814.19	transcript	ENST00000358932.9	protein_coding		2069		chr14	TogoVar
CCNJL_chr5_160244083_160317564	160282982	TATATATA others(21): Show TATATATATATATATATATATATATATAC	T T	intron_variant intron_variant	MODIFIER	HG00597.hp2 HG00609.hp2 HG01106.hp1 others(17): Show HG00597.hp2 HG00609.hp2 HG01106.hp1 HG01167.hp2 HG01169.hp1 HG01261.hp2 HG02083.hp2 HG02109.hp1 HG02129.hp1 HG02559.hp2 HG03139.hp1 HG03453.hp1 HG03471.hp2 HG03486.hp2 HG03688.hp1 NA18747.hp1 NA18959.hp1 NA18993.hp1 NA19002.hp1 NA19079.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0001c0003 a0004c0006 a0001c0001 a0001c0003 a0004c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0010 a0001c0001t0024 a0001c0003t0002 a0001c0003t0009 a0001c0003t0045 a0004c0006t0033	a0001c0001t0001g0218 a0001c0001t0002g0309 a0001c0001t0002g0314 others(17): Show a0001c0001t0001g0218 a0001c0001t0002g0309 a0001c0001t0002g0314 a0001c0001t0004g0064 a0001c0001t0004g0082 a0001c0001t0004g0083 a0001c0001t0004g0124 a0001c0001t0004g0159 a0001c0001t0004g0217 a0001c0001t0010g0186 a0001c0001t0010g0187 a0001c0001t0010g0239 a0001c0001t0024g0009 a0001c0003t0002g0289 a0001c0003t0009g0019 a0001c0003t0009g0046 a0001c0003t0009g0047 a0001c0003t0009g0050 a0001c0003t0045g0275 a0004c0006t0033g0242	20	338	0.0592	-28	c.67- others(43): Show c.67-2272_67-2245delGTATATATATATATATATATATATATAT	CCNJL	ENSG00000135083.17	transcript	ENST00000257536.13	protein_coding	2/5			chr5	TogoVar
CCNYL1_chr2_207706640_207761174	207729252	CCCCCCCC others(21): Show CCCCCCCCGCCCCCACCCCACCCCCCCCA	C C	intron_variant intron_variant	MODIFIER	NA18961.hp1 NA19074.hp2 NA19087.hp2 NA18961.hp1 NA19074.hp2 NA19087.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0232 a0001c0001t0002g0279 a0001c0001t0002g0285 a0001c0001t0001g0232 a0001c0001t0002g0279 a0001c0001t0002g0285	3	354	0.0085	-28	c.330 others(45): Show c.330+2386_330+2413delCCCCACCCCACCCCCCCCACCCCCCCGC	CCNYL1	ENSG00000163249.13	transcript	ENST00000295414.8	protein_coding	3/9		INFO_REALIGN_3_PRIME	chr2	TogoVar
CCR9_chr3_45881543_45908174	45906476	TGCCAAGC others(21): Show TGCCAAGCCAGACTTTGTGCTGAGGACCA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01515.hp2 HG01517.hp1 HG01515.hp2 HG01517.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0008 a0001c0001t0001g0008	2	424	0.0047	-28	c.45 others(39): Show c.4579_*4606delGCCAAGCCAGACTTTGTGCTGAGGACCA	CCR9	ENSG00000173585.18	transcript	ENST00000357632.7	protein_coding		3303		chr3	TogoVar
CCSER1_chr4_90122394_91610295	90932881	GGAAAGAA others(21): Show GGAAAGAAAGAAGGAAGGAGAAAGAAGGA	G G	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG01884.hp2 HG02809.hp2 others(2): Show HG01884.hp1 HG01884.hp2 HG02809.hp2 HG03139.hp1 HG03516.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0003 a0001c0008 others(1): Show a0001c0001 a0001c0003 a0001c0008 a0003c0005	a0001c0001t0005 a0001c0001t0008 a0001c0003t0002 others(2): Show a0001c0001t0005 a0001c0001t0008 a0001c0003t0002 a0001c0008t0019 a0003c0005t0010	a0001c0001t0005g0017 a0001c0001t0008g0038 a0001c0003t0002g0026 others(2): Show a0001c0001t0005g0017 a0001c0001t0008g0038 a0001c0003t0002g0026 a0001c0008t0019g0029 a0003c0005t0010g0004	5	38	0.1316	-28	c.217 others(47): Show c.2172+9446_2172+9473delGGAAGGAGAAAGAAGGAGAAAGAAAG AA	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	9/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	90932966	GAAAGAAA others(21): Show GAAAGAAAGAAAGAAAGAGAAAGAAAGAA	G G	intron_variant intron_variant	MODIFIER	HG03516.hp2 HG03516.hp2	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0004 a0004c0004t0004	a0004c0004t0004g0018 a0004c0004t0004g0018	1	38	0.0263	-28	c.217 others(47): Show c.2172+9521_2172+9548delAAGAAAGAAAGAAAGAGAAAGAAAGA AA	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	9/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	91225276	TTTATATA others(21): Show TTTATATATGTAATATATATGTATATATA	T T	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG01192.hp2 HG01243.hp1 others(25): Show HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01884.hp1 HG02109.hp1 HG02109.hp2 HG02258.hp2 HG02717.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02886.hp1 HG02897.hp1 HG02897.hp2 HG03017.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp1 HG03209.hp2 HG03239.hp1 HG03239.hp2 HG03516.hp2 NA18906.hp1 NA18906.hp2 NA19240.hp1 NA19240.hp2	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0005 a0006	a0001c0001 a0001c0003 a0001c0008 others(5): Show a0001c0001 a0001c0003 a0001c0008 a0002c0002 a0003c0005 a0004c0004 a0005c0007 a0006c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(18): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0011 a0001c0001t0013 a0001c0001t0020 a0001c0003t0002 a0001c0008t0019 a0002c0002t0006 a0002c0002t0008 a0002c0002t0018 a0003c0005t0005 a0003c0005t0010 a0004c0004t0001 a0004c0004t0004 a0005c0007t0012 a0006c0006t0016	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0016 others(25): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0016 a0001c0001t0001g0032 a0001c0001t0002g0027 a0001c0001t0003g0012 a0001c0001t0003g0031 a0001c0001t0003g0034 a0001c0001t0004g0005 a0001c0001t0004g0022 a0001c0001t0006g0023 a0001c0001t0007g0007 a0001c0001t0007g0036 a0001c0001t0008g0038 a0001c0001t0011g0003 a0001c0001t0013g0035 a0001c0001t0020g0033 a0001c0003t0002g0015 a0001c0008t0019g0029 a0002c0002t0006g0025 a0002c0002t0008g0030 a0002c0002t0018g0009 a0003c0005t0005g0011 a0003c0005t0010g0004 a0004c0004t0001g0021 a0004c0004t0004g0018 a0005c0007t0012g0010 a0006c0006t0016g0020	28	38	0.7368	-28	c.221 others(51): Show c.2217+139359_2217+139386delTATATATATTATATATGTAATA TATATG	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	10/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	91370052	AAAATTGA others(21): Show AAAATTGATACTAGTCTATTTAACCATGT	A A	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0018 a0002c0002t0018	a0002c0002t0018g0009 a0002c0002t0018g0009	1	38	0.0263	-28	c.221 others(51): Show c.2218-228518_2218-228491delAATTGATACTAGTCTATTTAAC CATGTA	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	10/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	91411483	CATATATA others(21): Show CATATATACATATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02717.hp2 HG02723.hp2 others(5): Show HG02258.hp2 HG02717.hp2 HG02723.hp2 HG02886.hp1 HG03017.hp2 HG03239.hp1 HG03516.hp2 NA18906.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0002c0002 a0003c0005 others(1): Show a0001c0001 a0002c0002 a0003c0005 a0004c0004	a0001c0001t0002 a0001c0001t0004 a0001c0001t0006 others(5): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0006 a0002c0002t0001 a0002c0002t0008 a0002c0002t0017 a0003c0005t0005 a0004c0004t0004	a0001c0001t0002g0027 a0001c0001t0004g0022 a0001c0001t0006g0023 others(5): Show a0001c0001t0002g0027 a0001c0001t0004g0022 a0001c0001t0006g0023 a0002c0002t0001g0006 a0002c0002t0008g0030 a0002c0002t0017g0008 a0003c0005t0005g0011 a0004c0004t0004g0018	8	38	0.2105	-28	c.221 others(51): Show c.2218-187081_2218-187054delCATATATATATATATATATATA TATATA	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	10/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
CCSER1_chr4_90122394_91610295	91496575	TATATATA others(21): Show TATATATATATACACGAATATATATTTGA	T T	intron_variant intron_variant	MODIFIER	NA18906.hp2 NA18906.hp2	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0001 a0004c0004t0001	a0004c0004t0001g0021 a0004c0004t0001g0021	1	38	0.0263	-28	c.221 others(51): Show c.2218-101957_2218-101930delCACGAATATATATTTGAATATA TATATA	CCSER1	ENSG00000184305.16	transcript	ENST00000509176.6	protein_coding	10/10		INFO_REALIGN_3_PRIME	chr4	TogoVar
CCZ1B_chr7_6793937_6831275	6818561	AAGACAGA others(21): Show AAGACAGAAAGAAAGACAGAAAGAAAGAC	A A	intron_variant intron_variant	MODIFIER	HG03130.hp1 HG03225.hp2 HG03130.hp1 HG03225.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0073 a0001c0002t0001g0086 a0001c0002t0001g0073 a0001c0002t0001g0086	2	354	0.0057	-28	c.698 others(45): Show c.698+1177_698+1204delGTCTTTCTTTCTGTCTTTCTTTCTGTCT	CCZ1B	ENSG00000146574.16	transcript	ENST00000316731.13	protein_coding	7/14			chr7	TogoVar
CD109_chr6_73691203_73833313	73707962	TTATATAT others(21): Show TTATATATATATATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG02896.hp1 HG02897.hp1 HG02896.hp1 HG02897.hp1	a0001 a0001	a0001c0012 a0001c0012	a0001c0012t0003 a0001c0012t0003	a0001c0012t0003g0305 a0001c0012t0003g0306 a0001c0012t0003g0305 a0001c0012t0003g0306	2	362	0.0055	-28	c.247 others(47): Show c.247+10410_247+10437delATATATATATATATATATATATATAT AT	CD109	ENSG00000156535.15	transcript	ENST00000287097.6	protein_coding	2/32		INFO_REALIGN_3_PRIME	chr6	TogoVar
CD109_chr6_73691203_73833313	73791152	TATATATA others(21): Show TATATATATATATATATATATATATACAC	T T	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01175.hp1 HG01099.hp1 HG01175.hp1	a0002 a0003 a0002 a0003	a0002c0003 a0003c0013 a0002c0003 a0003c0013	a0002c0003t0004 a0003c0013t0001 a0002c0003t0004 a0003c0013t0001	a0002c0003t0004g0155 a0003c0013t0001g0064 a0002c0003t0004g0155 a0003c0013t0001g0064	2	362	0.0055	-28	c.270 others(47): Show c.2702-1472_2702-1445delTATATATATATATATATATATATACA CA	CD109	ENSG00000156535.15	transcript	ENST00000287097.6	protein_coding	22/32		INFO_REALIGN_3_PRIME	chr6	TogoVar
CD163L1_chr12_7349960_7449153	7380327	ATGTATAC others(21): Show ATGTATACACGTATACATACATGTATGTG	A A	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02559.hp2 HG02258.hp2 HG02559.hp2	a0006 a0006	a0006c0009 a0006c0009	a0006c0009t0001 a0006c0009t0001	a0006c0009t0001g0032 a0006c0009t0001g0033 a0006c0009t0001g0032 a0006c0009t0001g0033	2	384	0.0052	-28	c.205 others(47): Show c.2051-1057_2051-1030delCACATACATGTATGTATACGTGTATA CA	CD163L1	ENSG00000177675.9	transcript	ENST00000313599.8	protein_coding	8/19			chr12	TogoVar
CD163L1_chr12_7349960_7449153	7380335	ACGTATAC others(21): Show ACGTATACATACATGTATGTGTGTATACG	A A	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG00609.hp1 HG02040.hp1 others(14): Show HG00544.hp2 HG00609.hp1 HG02040.hp1 HG02056.hp1 HG02129.hp2 HG02132.hp1 HG03927.hp1 NA18947.hp2 NA18950.hp1 NA18951.hp1 NA18973.hp1 NA18975.hp2 NA18980.hp1 NA18981.hp1 NA18992.hp1 NA19060.hp2 NA19088.hp2	a0001 a0014 a0001 a0014	a0001c0001 a0014c0019 a0001c0001 a0014c0019	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0014c0019t0001	a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0132 others(12): Show a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0002g0131 a0001c0001t0004g0136 a0014c0019t0001g0129	17	384	0.0443	-28	c.205 others(47): Show c.2051-1065_2051-1038delCGTATACACACATACATGTATGTATA CG	CD163L1	ENSG00000177675.9	transcript	ENST00000313599.8	protein_coding	8/19			chr12	TogoVar
CD163L1_chr12_7349960_7449153	7380372	TACATGTA others(21): Show TACATGTATGTGTGTATATGCGTATACAC	T T	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG01099.hp1 HG02129.hp1 others(13): Show HG00423.hp1 HG01099.hp1 HG02129.hp1 HG02486.hp2 HG02895.hp1 HG03486.hp2 HG03654.hp2 HG04228.hp2 NA18956.hp1 NA18968.hp1 NA18970.hp2 NA19009.hp2 NA19010.hp2 NA19085.hp2 NA19087.hp1 NA20300.hp2	a0003 a0003	a0003c0005 a0003c0005	a0003c0005t0001 a0003c0005t0002 a0003c0005t0003 a0003c0005t0001 a0003c0005t0002 a0003c0005t0003	a0003c0005t0001g0006 a0003c0005t0001g0025 a0003c0005t0001g0028 others(12): Show a0003c0005t0001g0006 a0003c0005t0001g0025 a0003c0005t0001g0028 a0003c0005t0001g0044 a0003c0005t0001g0048 a0003c0005t0001g0063 a0003c0005t0001g0065 a0003c0005t0001g0325 a0003c0005t0001g0326 a0003c0005t0001g0327 a0003c0005t0002g0026 a0003c0005t0002g0027 a0003c0005t0002g0042 a0003c0005t0003g0045 a0003c0005t0003g0058	16	384	0.0417	-28	c.205 others(47): Show c.2051-1102_2051-1075delGTGTATACGCATATACACACATACAT GT	CD163L1	ENSG00000177675.9	transcript	ENST00000313599.8	protein_coding	8/19			chr12	TogoVar

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