Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
FUT8_chr14_65407730_65749121	65699145	TACACACA others(21): Show TACACACACACACACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG00642.hp1 NA19070.hp2 HG00642.hp1 NA19070.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0002 a0002c0003t0001 a0001c0001t0002 a0002c0003t0001	a0001c0001t0002g0026 a0002c0003t0001g0355 a0001c0001t0002g0026 a0002c0003t0001g0355	2	374	0.0054	-28	c.836 others(47): Show c.836-22603_836-22576delACACACACACACACACACACACACAC AC	FUT8	ENSG00000033170.17	transcript	ENST00000673929.1	protein_coding	7/10		INFO_REALIGN_3_PRIME	chr14	TogoVar
FXYD1_chr19_35133824_35148109	35148026	GGAAAGAA others(21): Show GGAAAGAAAGAAAGAAAGAAAGAAAGAAA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01167.hp1 HG01169.hp1 HG02027.hp2 others(3): Show HG01167.hp1 HG01169.hp1 HG02027.hp2 HG06807.hp1 NA18522.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0007 a0001c0001t0001g0046 others(1): Show a0001c0001t0001g0001 a0001c0001t0001g0007 a0001c0001t0001g0046 a0001c0001t0001g0049	6	408	0.0147	-28	c.51 others(39): Show c.5140_*5167delGAAAGAAAGAAAGAAAGAAAGAAAGAAA	FXYD1	ENSG00000266964.6	transcript	ENST00000351325.9	protein_coding		4918		chr19	TogoVar
FXYD2_chr11_117815057_117829744	117826770	GTCTGTCT others(21): Show GTCTGTCTGTCTATCTATCTATCTATCTA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03516.hp2 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0028 a0001c0001t0001g0028	1	482	0.0021	-28	c.-21 others(39): Show c.-2120_-2093delTAGATAGATAGATAGATAGACAGACAGA	FXYD2	ENSG00000137731.14	transcript	ENST00000292079.7	protein_coding		2027		chr11	TogoVar
FXYD2_chr11_117815057_117829744	117827079	AATAGAGA others(21): Show AATAGAGAGATAGATAGATAGATAGATAG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp2 HG00558.hp1 HG00609.hp1 others(69): Show HG00140.hp2 HG00558.hp1 HG00609.hp1 HG00639.hp1 HG00642.hp2 HG00673.hp1 HG00741.hp1 HG01074.hp1 HG01243.hp2 HG01257.hp2 HG01258.hp2 HG02015.hp1 HG02015.hp2 HG02056.hp1 HG02071.hp1 HG02132.hp2 HG02135.hp2 HG02165.hp2 HG02293.hp1 HG02615.hp1 HG02622.hp2 HG02683.hp1 HG02717.hp2 HG02735.hp2 HG02922.hp2 HG03041.hp1 HG03239.hp1 HG03491.hp2 HG03540.hp1 HG03579.hp2 HG03654.hp2 HG03927.hp1 NA18522.hp2 NA18939.hp1 NA18943.hp2 NA18944.hp1 NA18945.hp2 NA18948.hp1 NA18949.hp2 NA18952.hp1 NA18955.hp2 NA18962.hp2 NA18963.hp2 NA18971.hp2 NA18973.hp1 NA18974.hp1 NA18975.hp2 NA18980.hp1 NA18980.hp2 NA18982.hp2 NA18985.hp2 NA18988.hp2 NA18990.hp1 NA18994.hp1 NA18994.hp2 NA18997.hp1 NA19001.hp2 NA19003.hp2 NA19007.hp2 NA19010.hp1 NA19010.hp2 NA19055.hp1 NA19064.hp2 NA19067.hp2 NA19070.hp2 NA19074.hp1 NA19079.hp1 NA19080.hp2 NA19091.hp2 NA19240.hp1 NA20129.hp1 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0006 others(1): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0006 a0001c0001t0007	a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0001g0015 others(12): Show a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0001g0015 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0070 a0001c0001t0004g0019 a0001c0001t0004g0098 a0001c0001t0006g0083 a0001c0001t0006g0084 a0001c0001t0007g0023	72	482	0.1494	-28	c.-24 others(39): Show c.-2429_-2402delCTATCTATCTATCTATCTATCTCTCTAT	FXYD2	ENSG00000137731.14	transcript	ENST00000292079.7	protein_coding		2336		chr11	TogoVar
FXYD6_chr11_117831981_117881658	117858631	TTTTCTTT others(21): Show TTTTCTTTCTTTCTTTCTTTCTTTCTTTC	T T	intron_variant intron_variant	MODIFIER	NA18906.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0400 a0001c0001t0002g0400	1	430	0.0023	-28	c.-5- others(45): Show c.-5-15878_-5-15851delGAAAGAAAGAAAGAAAGAAAGAAAGAAA	FXYD6	ENSG00000137726.17	transcript	ENST00000526014.6	protein_coding	1/7			chr11	TogoVar
FXYD7_chr19_35138255_35159302	35148026	GGAAAGAA others(21): Show GGAAAGAAAGAAAGAAAGAAAGAAAGAAA	G G	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG01169.hp1 HG02027.hp2 others(3): Show HG01167.hp2 HG01169.hp1 HG02027.hp2 HG06807.hp2 NA18522.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0190 a0001c0001t0001g0191 a0001c0001t0001g0243 others(3): Show a0001c0001t0001g0190 a0001c0001t0001g0191 a0001c0001t0001g0243 a0001c0001t0001g0244 a0001c0001t0001g0245 a0001c0001t0001g0282	6	444	0.0135	-28	c.32- others(41): Show c.32-625_32-598delAAGAAAGAAAGAAAGAAAGAAAGAAAGA	FXYD7	ENSG00000221946.8	transcript	ENST00000270310.7	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr19	TogoVar
FYB1_chr5_39100252_39224563	39182287	ATGTGTGT others(21): Show ATGTGTGTGTGTGTGTGTGTGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	NA20300.hp1 NA20300.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0075 a0002c0002t0003g0075	1	326	0.0031	-28	c.113 others(49): Show c.1135+19511_1135+19538delCACACACACACACACACACACACA CACA	FYB1	ENSG00000082074.19	transcript	ENST00000512982.4	protein_coding	2/18			chr5	TogoVar
FYB2_chr1_56713789_56824404	56757707	TTTCTTTC others(21): Show TTTCTTTCTTTCTTTCTTTCTTTCTTTCA	T T	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01167.hp2 HG01192.hp2 others(27): Show HG00639.hp2 HG01167.hp2 HG01192.hp2 HG01257.hp1 HG01361.hp1 HG01884.hp2 HG02486.hp1 HG02572.hp2 HG02602.hp2 HG02630.hp1 HG02647.hp2 HG02683.hp2 HG02698.hp1 HG02896.hp2 HG02897.hp2 HG02922.hp1 HG02970.hp1 HG02970.hp2 HG03017.hp1 HG03098.hp1 HG03491.hp1 HG03492.hp2 HG03516.hp2 HG03579.hp1 HG03669.hp1 HG03704.hp2 NA18522.hp2 NA18906.hp1 NA19030.hp2 NA19240.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0005	a0001c0001 a0001c0002 a0001c0009 others(5): Show a0001c0001 a0001c0002 a0001c0009 a0002c0003 a0003c0004 a0003c0005 a0004c0006 a0005c0008	a0001c0001t0001 a0001c0002t0001 a0001c0009t0003 others(5): Show a0001c0001t0001 a0001c0002t0001 a0001c0009t0003 a0002c0003t0001 a0003c0004t0001 a0003c0005t0001 a0004c0006t0001 a0005c0008t0001	a0001c0001t0001g0014 a0001c0001t0001g0096 a0001c0001t0001g0119 others(25): Show a0001c0001t0001g0014 a0001c0001t0001g0096 a0001c0001t0001g0119 a0001c0001t0001g0149 a0001c0001t0001g0168 a0001c0001t0001g0289 a0001c0001t0001g0291 a0001c0001t0001g0318 a0001c0001t0001g0323 a0001c0001t0001g0352 a0001c0001t0001g0353 a0001c0001t0001g0356 a0001c0001t0001g0359 a0001c0002t0001g0009 a0001c0002t0001g0084 a0001c0002t0001g0098 a0001c0002t0001g0099 a0001c0002t0001g0190 a0001c0002t0001g0302 a0001c0009t0003g0083 a0002c0003t0001g0015 a0003c0004t0001g0187 a0003c0004t0001g0188 a0003c0004t0001g0311 a0003c0005t0001g0300 a0004c0006t0001g0366 a0005c0008t0001g0006 a0005c0008t0001g0259	30	380	0.0790	-28	c.109 others(46): Show c.1098+981_1098+1008delTGAAAGAAAGAAAGAAAGAAAGAAAGA A	FYB2	ENSG00000187889.13	transcript	ENST00000343433.7	protein_coding	6/19			chr1	TogoVar
FYCO1_chr3_45912903_46000824	45977350	AATATATA others(21): Show AATATATATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00642.hp2 HG01070.hp1 others(24): Show HG00639.hp1 HG00642.hp2 HG01070.hp1 HG01255.hp1 HG01261.hp2 HG01346.hp2 HG01516.hp1 HG01517.hp1 HG03139.hp1 HG03831.hp1 HG03831.hp2 NA18960.hp1 NA18961.hp2 NA18972.hp1 NA18985.hp2 NA18988.hp2 NA18994.hp2 NA18995.hp2 NA19001.hp2 NA19011.hp1 NA19055.hp2 NA19075.hp2 NA19079.hp2 NA19084.hp2 NA19085.hp2 NA19087.hp1 NA20805.hp2	a0001 a0022 a0001 a0022	a0001c0002 a0001c0006 a0001c0012 others(1): Show a0001c0002 a0001c0006 a0001c0012 a0022c0030	a0001c0002t0002 a0001c0002t0004 a0001c0002t0008 others(7): Show a0001c0002t0002 a0001c0002t0004 a0001c0002t0008 a0001c0002t0015 a0001c0006t0003 a0001c0006t0004 a0001c0006t0025 a0001c0006t0032 a0001c0012t0002 a0022c0030t0020	a0001c0002t0002g0023 a0001c0002t0002g0091 a0001c0002t0004g0002 others(16): Show a0001c0002t0002g0023 a0001c0002t0002g0091 a0001c0002t0004g0002 a0001c0002t0004g0115 a0001c0002t0004g0166 a0001c0002t0004g0171 a0001c0002t0008g0124 a0001c0002t0015g0259 a0001c0006t0003g0007 a0001c0006t0003g0217 a0001c0006t0003g0223 a0001c0006t0004g0222 a0001c0006t0025g0224 a0001c0006t0032g0218 a0001c0012t0002g0105 a0001c0012t0002g0106 a0001c0012t0002g0107 a0001c0012t0002g0108 a0022c0030t0020g0109	27	336	0.0804	-28	c.289 others(45): Show c.289-2033_289-2006delATATATATATATATATATATATATATAT	FYCO1	ENSG00000163820.16	transcript	ENST00000296137.7	protein_coding	4/17			chr3	TogoVar
FYN_chr6_111655332_111878452	111797665	CATATATA others(21): Show CATATATATATATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00733.hp2 HG01069.hp2 others(55): Show HG00438.hp2 HG00733.hp2 HG01069.hp2 HG01071.hp2 HG01081.hp2 HG01884.hp1 HG01891.hp1 HG01891.hp2 HG02055.hp1 HG02055.hp2 HG02071.hp2 HG02080.hp1 HG02129.hp2 HG02165.hp2 HG02280.hp1 HG02486.hp2 HG02615.hp2 HG02630.hp1 HG02717.hp1 HG02723.hp1 HG02896.hp1 HG02965.hp1 HG02976.hp2 HG03098.hp1 HG03130.hp1 HG03130.hp2 HG03209.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03942.hp1 HG04228.hp1 NA18522.hp1 NA18906.hp1 NA18941.hp1 NA18943.hp1 NA18945.hp2 NA18950.hp2 NA18974.hp2 NA18982.hp1 NA18989.hp2 NA18993.hp1 NA19007.hp2 NA19011.hp2 NA19043.hp1 NA19043.hp2 NA19070.hp1 NA19079.hp2 NA19081.hp2 NA19087.hp2 NA19088.hp2 NA19090.hp1 NA19240.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 others(8): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0023 a0001c0001t0024 a0001c0002t0006 a0001c0003t0008	a0001c0001t0001g0099 a0001c0001t0001g0115 a0001c0001t0001g0130 others(55): Show a0001c0001t0001g0099 a0001c0001t0001g0115 a0001c0001t0001g0130 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0145 a0001c0001t0001g0148 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0165 a0001c0001t0001g0170 a0001c0001t0004g0098 a0001c0001t0004g0169 a0001c0001t0004g0171 a0001c0001t0004g0172 a0001c0001t0005g0199 a0001c0001t0005g0201 a0001c0001t0005g0202 a0001c0001t0005g0203 a0001c0001t0005g0215 a0001c0001t0005g0218 a0001c0001t0005g0220 a0001c0001t0005g0221 a0001c0001t0005g0222 a0001c0001t0005g0223 a0001c0001t0005g0224 a0001c0001t0005g0225 a0001c0001t0005g0227 a0001c0001t0005g0231 a0001c0001t0006g0200 a0001c0001t0006g0216 a0001c0001t0006g0217 a0001c0001t0006g0226 a0001c0001t0006g0228 a0001c0001t0006g0229 a0001c0001t0006g0230 a0001c0001t0008g0100 a0001c0001t0008g0101 a0001c0001t0008g0102 a0001c0001t0008g0104 a0001c0001t0008g0108 a0001c0001t0008g0163 a0001c0001t0009g0002 a0001c0001t0009g0003 a0001c0001t0009g0004 a0001c0001t0009g0005 a0001c0001t0009g0006 a0001c0001t0009g0007 a0001c0001t0009g0008 a0001c0001t0010g0166 a0001c0001t0010g0168 a0001c0001t0023g0214 a0001c0001t0024g0219 a0001c0002t0006g0198 a0001c0003t0008g0164	58	234	0.2479	-28	c.-81 others(47): Show c.-81-17058_-81-17031delATATATATATATATATATATATATAT AT	FYN	ENSG00000010810.18	transcript	ENST00000354650.7	protein_coding	2/13			chr6	TogoVar
FYN_chr6_111655332_111878452	111797685	TATATATA others(21): Show TATATATATATATATATATATATATATAC	T T	intron_variant intron_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0096 a0001c0001t0001g0096	1	234	0.0043	-28	c.-81 others(47): Show c.-81-17078_-81-17051delGTATATATATATATATATATATATAT AT	FYN	ENSG00000010810.18	transcript	ENST00000354650.7	protein_coding	2/13			chr6	TogoVar
FYTTD1_chr3_197744883_197792596	197760364	GTGTTCTT others(21): Show GTGTTCTTCAGTGGTAGAATGTATAGAGT	G G	intron_variant intron_variant	MODIFIER	NA19058.hp2 NA19058.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0054 a0002c0002t0002g0054	1	256	0.0039	-28	c.235 others(45): Show c.235+3846_235+3873delTGGTAGAATGTATAGAGTTGTTCTTCAG	FYTTD1	ENSG00000122068.13	transcript	ENST00000241502.9	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr3	TogoVar
FYTTD1_chr3_197744883_197792596	197760480	AGTTCTTC others(21): Show AGTTCTTCAGGGGTAGAATGTATAGAGTT	A A	intron_variant intron_variant	MODIFIER	HG01069.hp1 HG01071.hp1 HG02280.hp1 others(3): Show HG01069.hp1 HG01071.hp1 HG02280.hp1 HG02486.hp1 HG03471.hp1 HG06807.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0008 a0001c0003t0023 a0001c0003t0024 a0001c0003t0008 a0001c0003t0023 a0001c0003t0024	a0001c0003t0008g0012 a0001c0003t0008g0086 a0001c0003t0008g0087 others(2): Show a0001c0003t0008g0012 a0001c0003t0008g0086 a0001c0003t0008g0087 a0001c0003t0023g0085 a0001c0003t0024g0088	6	256	0.0234	-28	c.235 others(45): Show c.235+3970_235+3997delGTATAGAGTTGTTCTTCAGGGGTAGAAT	FYTTD1	ENSG00000122068.13	transcript	ENST00000241502.9	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr3	TogoVar
FYTTD1_chr3_197744883_197792596	197780002	ACAGGCAC others(21): Show ACAGGCACACACTGCCACACCTGGGGATG	A A	intron_variant intron_variant	MODIFIER	HG02818.hp2 HG02976.hp2 NA18906.hp2 HG02818.hp2 HG02976.hp2 NA18906.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0017 a0002c0002t0049 a0002c0002t0017 a0002c0002t0049	a0002c0002t0017g0091 a0002c0002t0017g0092 a0002c0002t0049g0090 a0002c0002t0017g0091 a0002c0002t0017g0092 a0002c0002t0049g0090	3	256	0.0117	-28	c.858 others(45): Show c.858+1550_858+1577delTGCCACACCTGGGGATGCAGGCACACAC	FYTTD1	ENSG00000122068.13	transcript	ENST00000241502.9	protein_coding	8/8		INFO_REALIGN_3_PRIME	chr3	TogoVar
GAA_chr17_80096581_80124881	80104448	CTGGGTGC others(21): Show CTGGGTGCTGCAGTGCCAGCCGCGGTTGA	C C	intron_variant intron_variant	MODIFIER	HG03834.hp1 HG03834.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0007 a0001c0002t0007	a0001c0002t0007g0062 a0001c0002t0007g0062	1	416	0.0024	-28	c.-32 others(42): Show c.-32-104_-32-77delGGTGCTGCAGTGCCAGCCGCGGTTGATG	GAA	ENSG00000171298.14	transcript	ENST00000302262.8	protein_coding	1/19		INFO_REALIGN_3_PRIME	chr17	TogoVar
GAB2_chr11_78210293_78422820	78309947	TGTGTGTG others(21): Show TGTGTGTGTGTGTGTGTGTGTGTGTGCGC	T T	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02647.hp2 HG02895.hp1 others(1): Show HG02622.hp2 HG02647.hp2 HG02895.hp1 NA20129.hp1	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0013 a0001c0005t0040 a0001c0005t0013 a0001c0005t0040	a0001c0005t0013g0127 a0001c0005t0013g0130 a0001c0005t0013g0131 others(1): Show a0001c0005t0013g0127 a0001c0005t0013g0130 a0001c0005t0013g0131 a0001c0005t0040g0129	4	288	0.0139	-28	c.76- others(45): Show c.76-29074_76-29047delGCGCACACACACACACACACACACACAC	GAB2	ENSG00000033327.13	transcript	ENST00000361507.5	protein_coding	1/9			chr11	TogoVar
GAB2_chr11_78210293_78422820	78346674	CATATATA others(21): Show CATATATATATATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG02647.hp1 HG02818.hp2 others(6): Show HG00741.hp2 HG02647.hp1 HG02818.hp2 HG02886.hp1 HG02922.hp1 HG02922.hp2 HG02965.hp1 NA18522.hp2 NA19030.hp1	a0001 a0002 a0007 a0001 a0002 a0007	a0001c0001 a0001c0003 a0001c0004 others(3): Show a0001c0001 a0001c0003 a0001c0004 a0001c0008 a0002c0006 a0007c0018	a0001c0001t0050 a0001c0003t0008 a0001c0004t0006 others(3): Show a0001c0001t0050 a0001c0003t0008 a0001c0004t0006 a0001c0008t0053 a0002c0006t0007 a0007c0018t0007	a0001c0001t0050g0259 a0001c0003t0008g0228 a0001c0004t0006g0125 others(6): Show a0001c0001t0050g0259 a0001c0003t0008g0228 a0001c0004t0006g0125 a0001c0008t0053g0123 a0002c0006t0007g0120 a0002c0006t0007g0121 a0002c0006t0007g0122 a0002c0006t0007g0271 a0007c0018t0007g0124	9	288	0.0313	-28	c.76- others(45): Show c.76-65801_76-65774delATATATATATATATATATATATATATAT	GAB2	ENSG00000033327.13	transcript	ENST00000361507.5	protein_coding	1/9			chr11	TogoVar
GABBR1_chr6_29597238_29638183	29619658	ATCCCTGT others(21): Show ATCCCTGTTTTCTGTCAGCCTCCTCTAGC	A A	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00423.hp2 HG00597.hp2 others(30): Show HG00408.hp1 HG00423.hp2 HG00597.hp2 HG00621.hp1 HG00741.hp2 HG01081.hp2 HG01099.hp2 HG01167.hp2 HG01168.hp1 HG01169.hp1 HG01169.hp2 HG01993.hp1 HG02027.hp1 HG02027.hp2 HG02083.hp1 HG02155.hp2 HG02523.hp1 HG02622.hp1 HG02647.hp1 HG02809.hp2 HG02886.hp1 HG03225.hp2 HG03579.hp2 HG03654.hp2 HG03831.hp2 HG03942.hp2 HG04184.hp2 NA18954.hp1 NA19002.hp1 NA19003.hp2 NA19068.hp2 NA20752.hp1 NA21309.hp1	a0001 a0003 a0001 a0003	a0001c0003 a0003c0005 a0001c0003 a0003c0005	a0001c0003t0002 a0001c0003t0004 a0001c0003t0010 others(3): Show a0001c0003t0002 a0001c0003t0004 a0001c0003t0010 a0001c0003t0011 a0003c0005t0005 a0003c0005t0007	a0001c0003t0002g0016 a0001c0003t0002g0064 a0001c0003t0002g0065 others(20): Show a0001c0003t0002g0016 a0001c0003t0002g0064 a0001c0003t0002g0065 a0001c0003t0004g0017 a0001c0003t0004g0018 a0001c0003t0004g0027 a0001c0003t0004g0028 a0001c0003t0004g0056 a0001c0003t0004g0057 a0001c0003t0004g0058 a0001c0003t0004g0059 a0001c0003t0004g0060 a0001c0003t0004g0061 a0001c0003t0004g0062 a0001c0003t0010g0063 a0001c0003t0011g0066 a0003c0005t0005g0026 a0003c0005t0005g0240 a0003c0005t0005g0241 a0003c0005t0005g0242 a0003c0005t0007g0072 a0003c0005t0007g0073 a0003c0005t0007g0074	33	407	0.0811	-28	c.132 others(47): Show c.1323+1415_1323+1442delGCTAGAGGAGGCTGACAGAAAACAGG GA	GABBR1	ENSG00000204681.11	transcript	ENST00000377034.9	protein_coding	11/22			chr6	TogoVar
GABBR1_chr6_29597238_29638183	29633966	GGTGTGTG others(21): Show GGTGTGTGTGTGTGTGTGTGTGTGTGTGT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03540.hp2 NA21309.hp2 HG03540.hp2 NA21309.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0046 a0001c0002t0003g0198 a0001c0002t0003g0046 a0001c0002t0003g0198	2	407	0.0049	-28	c.-11 others(39): Show c.-1145_-1118delACACACACACACACACACACACACACAC	GABBR1	ENSG00000204681.11	transcript	ENST00000377034.9	protein_coding		784		chr6	TogoVar
GABBR2_chr9_98283109_98713935	98436348	CATATATA others(21): Show CATATATATATATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG01081.hp1	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0010 a0001c0007t0010	a0001c0007t0010g0009 a0001c0007t0010g0009	1	164	0.0061	-28	c.123 others(49): Show c.1236+17605_1236+17632delATATATATATATATATATATATAT ATAT	GABBR2	ENSG00000136928.7	transcript	ENST00000259455.4	protein_coding	7/18			chr9	TogoVar
GABBR2_chr9_98283109_98713935	98436380	TATATATA others(21): Show TATATATATATATATATATATATATATAG	T T	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02258.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0017 a0001c0001t0017	a0001c0001t0017g0057 a0001c0001t0017g0057	1	164	0.0061	-28	c.123 others(49): Show c.1236+17573_1236+17600delCTATATATATATATATATATATAT ATAT	GABBR2	ENSG00000136928.7	transcript	ENST00000259455.4	protein_coding	7/18			chr9	TogoVar
GABPB1_chr15_50270389_50360198	50337075	GTATATAT others(21): Show GTATATATATATATATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG02015.hp2 HG02071.hp2 NA18962.hp2 others(2): Show HG02015.hp2 HG02071.hp2 NA18962.hp2 NA19064.hp1 NA19081.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0127 a0001c0001t0001g0207 a0001c0001t0001g0223 others(2): Show a0001c0001t0001g0127 a0001c0001t0001g0207 a0001c0001t0001g0223 a0001c0001t0001g0224 a0001c0001t0001g0225	5	366	0.0137	-28	c.-1+ others(45): Show c.-1+17882_-1+17909delTATATATATATATATATATATATATATA	GABPB1	ENSG00000104064.18	transcript	ENST00000380877.8	protein_coding	1/8			chr15	TogoVar
GABRA3_chrX_152161234_152456315	152212304	AAAAAAAA others(21): Show AAAAAAAAAAAAAAAAAAAAAAAAAAAAT	A A	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02622.hp1 HG02809.hp2 others(6): Show HG02572.hp1 HG02622.hp1 HG02809.hp2 HG02922.hp1 HG02965.hp1 HG03209.hp1 HG03540.hp1 HG06807.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0143 others(6): Show a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0143 a0001c0001t0001g0183 a0001c0001t0001g0184 a0001c0001t0001g0185 a0001c0001t0001g0193 a0001c0001t0002g0057 a0001c0001t0002g0070	9	204	0.0441	-28	c.635 others(45): Show c.635-4188_635-4161delATTTTTTTTTTTTTTTTTTTTTTTTTTT	GABRA3	ENSG00000011677.13	transcript	ENST00000370314.9	protein_coding	6/9			chrX	TogoVar
GABRA3_chrX_152161234_152456315	152360723	AATTAAAA others(21): Show AATTAAAAAAAAAAATTAAAAAAAAAAAT	A A	intron_variant intron_variant	MODIFIER	HG01070.hp2 HG01175.hp2 HG01496.hp2 others(15): Show HG01070.hp2 HG01175.hp2 HG01496.hp2 HG02080.hp1 HG02109.hp1 HG02523.hp2 HG02602.hp1 HG02723.hp2 HG03041.hp2 HG03130.hp1 HG03239.hp2 HG03540.hp2 HG03710.hp1 HG03942.hp1 NA18957.hp2 NA18967.hp1 NA18975.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0009 a0001c0001t0001 a0001c0001t0002 a0001c0001t0009	a0001c0001t0001g0101 a0001c0001t0001g0109 a0001c0001t0001g0135 others(15): Show a0001c0001t0001g0101 a0001c0001t0001g0109 a0001c0001t0001g0135 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0151 a0001c0001t0001g0171 a0001c0001t0001g0191 a0001c0001t0001g0196 a0001c0001t0002g0015 a0001c0001t0002g0017 a0001c0001t0002g0018 a0001c0001t0002g0056 a0001c0001t0002g0081 a0001c0001t0002g0087 a0001c0001t0002g0089 a0001c0001t0009g0043 a0001c0001t0009g0091	18	204	0.0882	-28	c.140 others(45): Show c.140+3680_140+3707delATTTTTTTTTTTAATTTTTTTTTTTAAT	GABRA3	ENSG00000011677.13	transcript	ENST00000370314.9	protein_coding	2/9			chrX	TogoVar
GABRB1_chr4_47026567_47431447	47195441	TAGATGAT others(21): Show TAGATGATAGATAGATTAGATGATAGATA	T T	intron_variant intron_variant	MODIFIER	HG01993.hp1 HG02027.hp2 HG02040.hp2 others(7): Show HG01993.hp1 HG02027.hp2 HG02040.hp2 HG02818.hp1 HG03490.hp2 HG03579.hp2 NA18974.hp2 NA18986.hp1 NA19074.hp2 NA19082.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 others(5): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0002t0004 a0001c0003t0011 a0001c0004t0001 a0001c0004t0010	a0001c0001t0001g0110 a0001c0001t0004g0106 a0001c0001t0005g0149 others(7): Show a0001c0001t0001g0110 a0001c0001t0004g0106 a0001c0001t0005g0149 a0001c0001t0006g0133 a0001c0002t0004g0104 a0001c0002t0004g0105 a0001c0003t0011g0056 a0001c0004t0001g0042 a0001c0004t0001g0153 a0001c0004t0010g0020	10	158	0.0633	-28	c.461 others(47): Show c.461+33973_461+34000delAGATGATAGATAGATTAGATGATAGA TA	GABRB1	ENSG00000163288.14	transcript	ENST00000295454.8	protein_coding	4/8			chr4	TogoVar
GABRB1_chr4_47026567_47431447	47195445	TGATAGAT others(21): Show TGATAGATAGATTAGATGATAGATAGATA	T T	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG02486.hp1	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0005 a0001c0007t0005	a0001c0007t0005g0132 a0001c0007t0005g0132	1	158	0.0063	-28	c.461 others(47): Show c.461+33988_461+34015delTAGATGATAGATAGATAGATAGATAG AT	GABRB1	ENSG00000163288.14	transcript	ENST00000295454.8	protein_coding	4/8		INFO_REALIGN_3_PRIME	chr4	TogoVar
GABRB1_chr4_47026567_47431447	47246337	CATATATA others(21): Show CATATATATATATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG02965.hp1 HG03490.hp1 others(1): Show HG00438.hp1 HG02965.hp1 HG03490.hp1 HG03492.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0001t0001 a0001c0001t0002 a0001c0002t0001	a0001c0001t0001g0037 a0001c0001t0001g0156 a0001c0001t0002g0040 others(1): Show a0001c0001t0001g0037 a0001c0001t0001g0156 a0001c0001t0002g0040 a0001c0002t0001g0036	4	158	0.0253	-28	c.462 others(47): Show c.462-73758_462-73731delTATATATATATATATATATATATATA TA	GABRB1	ENSG00000163288.14	transcript	ENST00000295454.8	protein_coding	4/8		INFO_REALIGN_3_PRIME	chr4	TogoVar
GABRB2_chr5_161283436_161551725	161463549	TTTTATTT others(21): Show TTTTATTTATATATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	NA19000.hp2 NA19054.hp1 NA19000.hp2 NA19054.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0139 a0001c0001t0002g0179 a0001c0001t0002g0139 a0001c0001t0002g0179	2	266	0.0075	-28	c.238 others(45): Show c.238-3733_238-3706delTATATATATATATATATATATAAATAAA	GABRB2	ENSG00000145864.14	transcript	ENST00000393959.6	protein_coding	3/9			chr5	TogoVar
GABRB3_chr15_26538552_26778066	26764169	AAAAAAAA others(21): Show AAAAAAAAAAAATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG02965.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0190 a0001c0001t0008g0190	1	204	0.0049	-28	c.240 others(45): Show c.240+8205_240+8232delATATATATATATATATATTTTTTTTTTT	GABRB3	ENSG00000166206.16	transcript	ENST00000311550.10	protein_coding	3/8			chr15	TogoVar
GABRB3_chr15_26538552_26778066	26764171	AAAAAAAA others(21): Show AAAAAAAAAATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01993.hp2 HG02300.hp2 others(2): Show HG01099.hp1 HG01993.hp2 HG02300.hp2 HG03139.hp2 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0030	a0001c0001t0001g0061 a0001c0001t0002g0037 a0001c0001t0004g0034 others(2): Show a0001c0001t0001g0061 a0001c0001t0002g0037 a0001c0001t0004g0034 a0001c0001t0004g0060 a0001c0001t0030g0138	5	204	0.0245	-28	c.240 others(45): Show c.240+8203_240+8230delATATATATATATATATATATTTTTTTTT	GABRB3	ENSG00000166206.16	transcript	ENST00000311550.10	protein_coding	3/8			chr15	TogoVar
GABRB3_chr15_26538552_26778066	26764173	AAAAAAAA others(21): Show AAAAAAAATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01975.hp1 HG02293.hp2 others(4): Show HG01243.hp2 HG01975.hp1 HG02293.hp2 HG02559.hp2 HG03017.hp1 HG03209.hp1 HG03579.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0003t0020	a0001c0001t0001g0065 a0001c0001t0002g0032 a0001c0001t0003g0143 others(4): Show a0001c0001t0001g0065 a0001c0001t0002g0032 a0001c0001t0003g0143 a0001c0001t0004g0033 a0001c0001t0004g0064 a0001c0001t0006g0063 a0001c0003t0020g0003	7	204	0.0343	-28	c.240 others(45): Show c.240+8201_240+8228delATATATATATATATATATATATTTTTTT	GABRB3	ENSG00000166206.16	transcript	ENST00000311550.10	protein_coding	3/8			chr15	TogoVar
GABRB3_chr15_26538552_26778066	26764175	AAAAAATA others(21): Show AAAAAATATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG01071.hp2 HG01516.hp1 others(1): Show HG00323.hp1 HG01071.hp2 HG01516.hp1 NA19082.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0005 a0001c0001t0001g0080 a0001c0001t0002g0069 others(1): Show a0001c0001t0001g0005 a0001c0001t0001g0080 a0001c0001t0002g0069 a0001c0001t0002g0070	4	204	0.0196	-28	c.240 others(45): Show c.240+8199_240+8226delATATATATATATATATATATATATTTTT	GABRB3	ENSG00000166206.16	transcript	ENST00000311550.10	protein_coding	3/8			chr15	TogoVar
GABRB3_chr15_26538552_26778066	26764177	AAAATATA others(21): Show AAAATATATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02717.hp2 HG02738.hp1 others(1): Show HG02572.hp2 HG02717.hp2 HG02738.hp1 HG03704.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0035 a0001c0001t0002 a0001c0001t0035	a0001c0001t0002g0006 a0001c0001t0002g0007 a0001c0001t0002g0077 others(1): Show a0001c0001t0002g0006 a0001c0001t0002g0007 a0001c0001t0002g0077 a0001c0001t0035g0202	4	204	0.0196	-28	c.240 others(45): Show c.240+8197_240+8224delATATATATATATATATATATATATATTT	GABRB3	ENSG00000166206.16	transcript	ENST00000311550.10	protein_coding	3/8			chr15	TogoVar
GABRB3_chr15_26538552_26778066	26764179	AATATATA others(21): Show AATATATATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02698.hp2 HG02698.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0008 a0001c0001t0004g0008	1	204	0.0049	-28	c.240 others(45): Show c.240+8195_240+8222delATATATATATATATATATATATATATAT	GABRB3	ENSG00000166206.16	transcript	ENST00000311550.10	protein_coding	3/8			chr15	TogoVar
GABRG3_chr15_26966181_27546984	27145115	AGGAAAAA others(21): Show AGGAAAAATAAGGAATGAACCATATACAG	A A	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG01071.hp1 HG01099.hp2 others(20): Show HG00323.hp2 HG01071.hp1 HG01099.hp2 HG01433.hp2 HG01496.hp1 HG01891.hp2 HG02109.hp1 HG02145.hp2 HG02451.hp2 HG02572.hp2 HG02809.hp2 HG02922.hp1 HG03209.hp1 HG03209.hp2 HG03225.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG04115.hp2 HG06807.hp1 NA19030.hp1 NA20752.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(6): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0007 a0001c0008 a0001c0018	a0001c0001t0001 a0001c0001t0007 a0001c0001t0015 others(16): Show a0001c0001t0001 a0001c0001t0007 a0001c0001t0015 a0001c0001t0031 a0001c0002t0001 a0001c0002t0026 a0001c0002t0029 a0001c0002t0035 a0001c0003t0006 a0001c0003t0032 a0001c0004t0002 a0001c0004t0005 a0001c0004t0011 a0001c0004t0030 a0001c0005t0005 a0001c0006t0003 a0001c0007t0001 a0001c0008t0008 a0001c0018t0004	a0001c0001t0001g0021 a0001c0001t0001g0071 a0001c0001t0001g0091 others(20): Show a0001c0001t0001g0021 a0001c0001t0001g0071 a0001c0001t0001g0091 a0001c0001t0007g0010 a0001c0001t0015g0013 a0001c0001t0031g0028 a0001c0002t0001g0027 a0001c0002t0001g0041 a0001c0002t0001g0085 a0001c0002t0026g0070 a0001c0002t0029g0032 a0001c0002t0035g0019 a0001c0003t0006g0034 a0001c0003t0032g0040 a0001c0004t0002g0061 a0001c0004t0005g0050 a0001c0004t0011g0078 a0001c0004t0030g0063 a0001c0005t0005g0037 a0001c0006t0003g0008 a0001c0007t0001g0048 a0001c0008t0008g0001 a0001c0018t0004g0053	23	92	0.2500	-28	c.270 others(49): Show c.270+118330_270+118357delTAAGGAATGAACCATATACAGGGA AAAA	GABRG3	ENSG00000182256.13	transcript	ENST00000615808.5	protein_coding	3/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
GABRG3_chr15_26966181_27546984	27306633	TATATTTA others(21): Show TATATTTATATATAAACATATATATGAAC	T T	intron_variant intron_variant	MODIFIER	HG06807.hp2 HG06807.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0022 a0001c0003t0022	a0001c0003t0022g0058 a0001c0003t0022g0058	1	92	0.0109	-28	c.271 others(47): Show c.271-20173_271-20146delATTTATATATAAACATATATATGAAC AT	GABRG3	ENSG00000182256.13	transcript	ENST00000615808.5	protein_coding	3/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
GABRG3_chr15_26966181_27546984	27306636	ATTTATAT others(21): Show ATTTATATATAAACATATATATGAACATG	A A	intron_variant intron_variant	MODIFIER	HG01070.hp2 HG01070.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0047 a0001c0002t0001g0047	1	92	0.0109	-28	c.271 others(47): Show c.271-20126_271-20099delTATGAACATGTTTATATATAAACATA TA	GABRG3	ENSG00000182256.13	transcript	ENST00000615808.5	protein_coding	3/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
GABRG3_chr15_26966181_27546984	27307261	TTATATGT others(21): Show TTATATGTTTATATATAACCATAGGTTTA	T T	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01109.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0029 a0001c0002t0001g0029	1	92	0.0109	-28	c.271 others(47): Show c.271-19469_271-19442delGGTTTATATATGTTTATATATAACCA TA	GABRG3	ENSG00000182256.13	transcript	ENST00000615808.5	protein_coding	3/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
GABRR2_chr6_89249464_89320299	89280211	AATATATA others(21): Show AATATATATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02818.hp1 HG02615.hp1 HG02818.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0027 a0001c0001t0003 a0001c0001t0027	a0001c0001t0003g0049 a0001c0001t0027g0048 a0001c0001t0003g0049 a0001c0001t0027g0048	2	366	0.0055	-28	c.221 others(45): Show c.221-8517_221-8490delATATATATATATATATATATATATATAT	GABRR2	ENSG00000111886.11	transcript	ENST00000402938.4	protein_coding	2/8			chr6	TogoVar
GAD1_chr2_170811887_170866151	170861931	TTGTGTGT others(21): Show TTGTGTGTGTGTGTGTGTGTGTGTATGTG	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02809.hp2 HG03195.hp2 HG02809.hp2 HG03195.hp2	a0001 a0001	a0001c0004 a0001c0013 a0001c0004 a0001c0013	a0001c0004t0001 a0001c0013t0001 a0001c0004t0001 a0001c0013t0001	a0001c0004t0001g0118 a0001c0013t0001g0117 a0001c0004t0001g0118 a0001c0013t0001g0117	2	412	0.0049	-28	c.20 others(39): Show c.2050_*2077delTGTGTGTGTGTGTGTGTGTGTGTATGTG	GAD1	ENSG00000128683.14	transcript	ENST00000358196.8	protein_coding		781		chr2	TogoVar
GADL1_chr3_30721197_30899661	30867423	CATATATA others(21): Show CATATATATATATATATACACATATATGT	C C	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG06807.hp1 HG02257.hp2 HG06807.hp1	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0001 a0003c0004t0001	a0003c0004t0001g0010 a0003c0004t0001g0098 a0003c0004t0001g0010 a0003c0004t0001g0098	2	282	0.0071	-28	c.38- others(43): Show c.38-5686_38-5659delACATATATGTGTATATATATATATATAT	GADL1	ENSG00000144644.15	transcript	ENST00000282538.10	protein_coding	1/14			chr3	TogoVar
GAGE13_chrX_49326582_49343949	49337667	TTTATTTA others(21): Show TTTATTTATTTATTTATTGTTATACTTTA	T T	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG01081.hp1 HG01167.hp1 others(16): Show HG00408.hp2 HG01081.hp1 HG01167.hp1 HG01256.hp1 HG01928.hp1 HG02080.hp1 HG02602.hp1 HG02622.hp2 HG02683.hp1 HG03239.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 NA18948.hp1 NA18963.hp1 NA18998.hp2 NA19012.hp1 NA19062.hp1 NA20129.hp1	a0002 a0007 a0002 a0007	a0002c0002 a0007c0007 a0002c0002 a0007c0007	a0002c0002t0001 a0002c0002t0006 a0007c0007t0001 a0002c0002t0001 a0002c0002t0006 a0007c0007t0001	a0002c0002t0001g0002 a0002c0002t0001g0005 a0002c0002t0001g0012 others(8): Show a0002c0002t0001g0002 a0002c0002t0001g0005 a0002c0002t0001g0012 a0002c0002t0001g0016 a0002c0002t0001g0017 a0002c0002t0001g0018 a0002c0002t0001g0032 a0002c0002t0001g0056 a0002c0002t0001g0057 a0002c0002t0006g0011 a0007c0007t0001g0002	19	93	0.2043	-28	c.332 others(45): Show c.332-1168_332-1141delTTATTTATTTATTTATTGTTATACTTTA	GAGE13	ENSG00000274274.2	transcript	ENST00000612958.2	protein_coding	4/4			chrX	TogoVar
GALK2_chr15_49165247_49336882	49178294	CATGTACA others(21): Show CATGTACATATATGTATGCACATATATGT	C C	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG00621.hp1 HG01243.hp1 others(25): Show HG00558.hp1 HG00621.hp1 HG01243.hp1 HG02004.hp1 HG02071.hp1 HG02083.hp2 HG02165.hp2 HG02523.hp2 HG04204.hp2 NA18947.hp1 NA18950.hp1 NA18951.hp1 NA18953.hp1 NA18962.hp2 NA18968.hp2 NA18971.hp2 NA18975.hp2 NA18981.hp1 NA18990.hp1 NA18997.hp1 NA18998.hp2 NA18999.hp1 NA19010.hp2 NA19056.hp2 NA19058.hp2 NA19074.hp2 NA19082.hp1 NA19087.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 a0001c0001t0010 a0001c0001t0050 a0001c0001t0053	a0001c0001t0001g0006 a0001c0001t0001g0010 a0001c0001t0002g0009 others(25): Show a0001c0001t0001g0006 a0001c0001t0001g0010 a0001c0001t0002g0009 a0001c0001t0002g0017 a0001c0001t0002g0020 a0001c0001t0006g0004 a0001c0001t0006g0005 a0001c0001t0006g0007 a0001c0001t0006g0008 a0001c0001t0006g0011 a0001c0001t0006g0012 a0001c0001t0006g0014 a0001c0001t0006g0015 a0001c0001t0006g0016 a0001c0001t0006g0018 a0001c0001t0006g0019 a0001c0001t0006g0021 a0001c0001t0006g0022 a0001c0001t0006g0024 a0001c0001t0006g0025 a0001c0001t0006g0027 a0001c0001t0006g0028 a0001c0001t0006g0029 a0001c0001t0006g0030 a0001c0001t0006g0031 a0001c0001t0010g0026 a0001c0001t0050g0023 a0001c0001t0053g0013	28	348	0.0805	-28	c.53+ others(43): Show c.53+7932_53+7959delGTATGCACATATATGTATGTACATATAT	GALK2	ENSG00000156958.15	transcript	ENST00000560031.6	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
GALK2_chr15_49165247_49336882	49192485	GTATATAT others(21): Show GTATATATATATATATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG02922.hp1 HG02922.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0015 a0001c0001t0015	a0001c0001t0015g0069 a0001c0001t0015g0069	1	348	0.0029	-28	c.54- others(43): Show c.54-8664_54-8637delTATATATATATATATATATATATATATA	GALK2	ENSG00000156958.15	transcript	ENST00000560031.6	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
GALK2_chr15_49165247_49336882	49277137	ATTTTTTT others(21): Show ATTTTTTTTTTTTTTTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02055.hp1 HG02486.hp2 others(9): Show HG01884.hp1 HG02055.hp1 HG02486.hp2 HG02572.hp1 HG02723.hp1 HG02818.hp1 HG03098.hp1 HG03209.hp1 HG03471.hp2 HG03579.hp1 NA18974.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0001t0008 a0001c0003t0008 a0001c0001t0001 a0001c0001t0008 a0001c0003t0008	a0001c0001t0001g0308 a0001c0001t0008g0032 a0001c0001t0008g0033 others(9): Show a0001c0001t0001g0308 a0001c0001t0008g0032 a0001c0001t0008g0033 a0001c0001t0008g0034 a0001c0001t0008g0120 a0001c0001t0008g0121 a0001c0001t0008g0122 a0001c0001t0008g0124 a0001c0001t0008g0127 a0001c0003t0008g0123 a0001c0003t0008g0125 a0001c0003t0008g0126	12	348	0.0345	-28	c.505 others(45): Show c.505-4828_505-4801delTTTTTTTTTTTTTTTTTTTTTTTTTTTT	GALK2	ENSG00000156958.15	transcript	ENST00000560031.6	protein_coding	5/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
GALM_chr2_38661114_38739765	38675525	TGTTTTTT others(21): Show TGTTTTTTTTTTTTTTTTTTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG02602.hp1 HG04204.hp2 HG02602.hp1 HG04204.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0016 a0001c0001t0001 a0001c0001t0016	a0001c0001t0001g0197 a0001c0001t0016g0169 a0001c0001t0001g0197 a0001c0001t0016g0169	2	328	0.0061	-28	c.191 others(43): Show c.191-386_191-359delGTTTTTTTTTTTTTTTTTTGTGTGTGTG	GALM	ENSG00000143891.17	transcript	ENST00000272252.10	protein_coding	1/6			chr2	TogoVar
GALM_chr2_38661114_38739765	38686220	ATTTCTTT others(21): Show ATTTCTTTCTTTCTTTCTTTCTTTCTTTC	A A	intron_variant intron_variant	MODIFIER	HG01496.hp2 HG01884.hp2 HG02055.hp1 others(9): Show HG01496.hp2 HG01884.hp2 HG02055.hp1 HG02055.hp2 HG02109.hp1 HG02145.hp1 HG02723.hp1 HG02818.hp1 HG02886.hp1 HG02976.hp1 HG03516.hp1 HG03579.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0006 a0002c0002t0009 a0002c0002t0012 others(3): Show a0002c0002t0006 a0002c0002t0009 a0002c0002t0012 a0002c0002t0018 a0002c0002t0029 a0002c0002t0030	a0002c0002t0006g0232 a0002c0002t0009g0001 a0002c0002t0009g0231 others(9): Show a0002c0002t0006g0232 a0002c0002t0009g0001 a0002c0002t0009g0231 a0002c0002t0009g0235 a0002c0002t0009g0237 a0002c0002t0009g0238 a0002c0002t0012g0233 a0002c0002t0012g0234 a0002c0002t0012g0239 a0002c0002t0018g0236 a0002c0002t0029g0001 a0002c0002t0030g0140	12	328	0.0366	-28	c.553 others(45): Show c.553-3562_553-3535delTCTTTCTTTCTTTCTTTCTTTCTTTCTT	GALM	ENSG00000143891.17	transcript	ENST00000272252.10	protein_coding	3/6		INFO_REALIGN_3_PRIME	chr2	TogoVar
GALM_chr2_38661114_38739765	38703054	TTATATAT others(21): Show TTATATATATATATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02723.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0032 a0001c0001t0032	a0001c0001t0032g0324 a0001c0001t0032g0324	1	328	0.0031	-28	c.634 others(47): Show c.634+13172_634+13199delATATATATATATATATATATATATAT AT	GALM	ENSG00000143891.17	transcript	ENST00000272252.10	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr2	TogoVar
GALM_chr2_38661114_38739765	38703070	ATATATAT others(21): Show ATATATATATATATATATATATATTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02109.hp1 HG02145.hp1 others(5): Show HG01884.hp2 HG02109.hp1 HG02145.hp1 HG02818.hp1 HG02886.hp1 HG02976.hp1 HG03516.hp1 HG03579.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0009 a0002c0002t0012 a0002c0002t0018 others(1): Show a0002c0002t0009 a0002c0002t0012 a0002c0002t0018 a0002c0002t0029	a0002c0002t0009g0001 a0002c0002t0009g0231 a0002c0002t0009g0237 others(5): Show a0002c0002t0009g0001 a0002c0002t0009g0231 a0002c0002t0009g0237 a0002c0002t0009g0238 a0002c0002t0012g0233 a0002c0002t0012g0234 a0002c0002t0018g0236 a0002c0002t0029g0001	8	328	0.0244	-28	c.634 others(47): Show c.634+13178_634+13205delATATATATATATATATATATATTTTT TT	GALM	ENSG00000143891.17	transcript	ENST00000272252.10	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr2	TogoVar
GALNT10_chr5_154185733_154425984	154371561	TGTACACA others(21): Show TGTACACACACACACACACACACGTGTGC	T T	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG02717.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0038 a0001c0004t0038	a0001c0004t0038g0063 a0001c0004t0038g0063	1	236	0.0042	-28	c.569 others(45): Show c.569-4715_569-4688delGTACACACACACACACACACACGTGTGC	GALNT10	ENSG00000164574.16	transcript	ENST00000297107.11	protein_coding	4/11			chr5	TogoVar

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