Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
HS3ST2_chr16_22809162_22921338	22818666	TCCTTCCT others(21): Show TCCTTCCTTCCTCCCTCCCTCCTTGCCTG	T T	intron_variant intron_variant	MODIFIER	HG01175.hp2 HG02451.hp1 HG02717.hp1 HG01175.hp2 HG02451.hp1 HG02717.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0217 a0001c0001t0001g0218 a0001c0001t0001g0299 a0001c0001t0001g0217 a0001c0001t0001g0218 a0001c0001t0001g0299	3	350	0.0086	-28	c.485 others(45): Show c.485+3583_485+3610delCCCTCCCTCCTTGCCTGCCTTCCTTCCT	HS3ST2	ENSG00000122254.7	transcript	ENST00000261374.4	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr16	TogoVar
HS3ST4_chr16_25686959_26142685	25789403	TTTCCTTC others(21): Show TTTCCTTCCTTCCTTCCTTCCTTCCTTCC	T T	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00438.hp2 HG00735.hp1 others(19): Show HG00140.hp1 HG00438.hp2 HG00735.hp1 HG01071.hp1 HG01346.hp1 HG01516.hp1 HG01517.hp2 HG01934.hp1 HG02615.hp2 HG02717.hp1 HG02809.hp1 HG02886.hp1 HG02922.hp1 HG03098.hp2 HG03225.hp1 HG03688.hp1 HG03834.hp1 HG03942.hp2 HG04184.hp1 NA18522.hp2 NA19088.hp2 NA20905.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0009 a0002c0002 others(1): Show a0001c0001 a0001c0009 a0002c0002 a0003c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(10): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0009 a0001c0001t0020 a0001c0001t0021 a0001c0001t0033 a0001c0001t0037 a0001c0009t0024 a0002c0002t0002 a0003c0003t0008	a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0021 others(19): Show a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0021 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0060 a0001c0001t0001g0122 a0001c0001t0002g0042 a0001c0001t0003g0081 a0001c0001t0003g0162 a0001c0001t0004g0086 a0001c0001t0005g0067 a0001c0001t0005g0068 a0001c0001t0005g0070 a0001c0001t0009g0128 a0001c0001t0020g0097 a0001c0001t0021g0154 a0001c0001t0033g0129 a0001c0001t0037g0124 a0001c0009t0024g0139 a0002c0002t0002g0050 a0003c0003t0008g0136	22	164	0.1342	-28	c.734 others(47): Show c.734+96292_734+96319delCTTCCTTCCTTCCTTCCTTCCTTCCT TC	HS3ST4	ENSG00000182601.7	transcript	ENST00000331351.6	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr16	TogoVar
HS3ST4_chr16_25686959_26142685	25904135	GATGGATG others(21): Show GATGGATGGATGGATGGATGAATGGATGA	G G	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02055.hp2 HG02258.hp1 others(5): Show HG01243.hp1 HG02055.hp2 HG02258.hp1 HG02451.hp2 HG03225.hp2 HG06807.hp1 NA18522.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 others(3): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0001t0010 a0001c0001t0026	a0001c0001t0002g0016 a0001c0001t0002g0020 a0001c0001t0002g0073 others(5): Show a0001c0001t0002g0016 a0001c0001t0002g0020 a0001c0001t0002g0073 a0001c0001t0004g0159 a0001c0001t0005g0157 a0001c0001t0007g0082 a0001c0001t0010g0158 a0001c0001t0026g0072	8	164	0.0488	-28	c.734 others(49): Show c.734+211004_734+211031delAATGGATGAATGGATGGATGGATG GATG	HS3ST4	ENSG00000182601.7	transcript	ENST00000331351.6	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr16	TogoVar
HS3ST4_chr16_25686959_26142685	25993949	CGTGTGTG others(21): Show CGTGTGTGTGTGTGTGTGTGTGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00642.hp1 HG00642.hp2 others(16): Show HG00438.hp2 HG00642.hp1 HG00642.hp2 HG00735.hp2 HG01074.hp2 HG01261.hp2 HG01516.hp2 HG03017.hp2 HG03239.hp2 HG04184.hp1 NA18747.hp2 NA18981.hp2 NA18992.hp1 NA19009.hp1 NA19012.hp1 NA19057.hp2 NA19083.hp1 NA19088.hp2 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(9): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0015 a0001c0001t0020 a0001c0001t0022 a0001c0001t0029 a0001c0001t0036 a0001c0001t0040 a0001c0001t0041	a0001c0001t0001g0019 a0001c0001t0001g0033 a0001c0001t0001g0063 others(16): Show a0001c0001t0001g0019 a0001c0001t0001g0033 a0001c0001t0001g0063 a0001c0001t0001g0102 a0001c0001t0001g0107 a0001c0001t0001g0122 a0001c0001t0001g0127 a0001c0001t0002g0111 a0001c0001t0004g0086 a0001c0001t0004g0098 a0001c0001t0005g0069 a0001c0001t0006g0007 a0001c0001t0015g0093 a0001c0001t0020g0097 a0001c0001t0022g0143 a0001c0001t0029g0027 a0001c0001t0036g0018 a0001c0001t0040g0043 a0001c0001t0041g0055	19	164	0.1159	-28	c.735 others(49): Show c.735-141631_735-141604delTGTGTGTGTGTGTGTGTGTGTGTG TGTG	HS3ST4	ENSG00000182601.7	transcript	ENST00000331351.6	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr16	TogoVar
HS3ST4_chr16_25686959_26142685	26049327	GTCCGGAG others(21): Show GTCCGGAGGTCTACATCCGGAGGTCTACA	G G	intron_variant intron_variant	MODIFIER	HG03831.hp2 HG03831.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0039 a0001c0001t0039	a0001c0001t0039g0152 a0001c0001t0039g0152	1	164	0.0061	-28	c.735 others(47): Show c.735-86235_735-86208delGTCTACATCCGGAGGTCTACATCCGG AG	HS3ST4	ENSG00000182601.7	transcript	ENST00000331351.6	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr16	TogoVar
HS3ST5_chr6_114050596_114348023	114141858	TTGTGTGT others(21): Show TTGTGTGTGTGTGTGTGTGTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02622.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0041 a0001c0001t0041	a0001c0001t0041g0204 a0001c0001t0041g0204	1	206	0.0049	-28	c.-33 others(47): Show c.-33+26465_-33+26492delCACACACACACACACACACACACACA CA	HS3ST5	ENSG00000249853.9	transcript	ENST00000312719.10	protein_coding	3/4			chr6	TogoVar
HS6ST3_chr13_96085107_96844562	96118672	ATATATAT others(21): Show ATATATATATATATATATTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG03139.hp1 HG03139.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0084 a0001c0001t0009g0084	1	116	0.0086	-28	c.707 others(47): Show c.707+27105_707+27132delATATATATATATATATTTTTTTTTTT TT	HS6ST3	ENSG00000185352.10	transcript	ENST00000376705.4	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr13	TogoVar
HS6ST3_chr13_96085107_96844562	96132121	TACACACA others(21): Show TACACACACACACACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG01109.hp2 HG03130.hp1 others(1): Show HG01106.hp1 HG01109.hp2 HG03130.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0013 a0001c0001t0035 a0001c0001t0001 a0001c0001t0013 a0001c0001t0035	a0001c0001t0001g0041 a0001c0001t0001g0105 a0001c0001t0013g0108 others(1): Show a0001c0001t0001g0041 a0001c0001t0001g0105 a0001c0001t0013g0108 a0001c0001t0035g0106	4	116	0.0345	-28	c.707 others(47): Show c.707+40576_707+40603delCACACACACACACACACACACACACA CA	HS6ST3	ENSG00000185352.10	transcript	ENST00000376705.4	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr13	TogoVar
HS6ST3_chr13_96085107_96844562	96254434	AAAAAAAA others(21): Show AAAAAAAAAAAAAAAATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01496.hp2 NA18950.hp1 NA19007.hp1 HG01496.hp2 NA18950.hp1 NA19007.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0010 a0001c0001t0011 a0001c0001t0003 a0001c0001t0010 a0001c0001t0011	a0001c0001t0003g0057 a0001c0001t0010g0055 a0001c0001t0011g0058 a0001c0001t0003g0057 a0001c0001t0010g0055 a0001c0001t0011g0058	3	116	0.0259	-28	c.707 others(49): Show c.707+162867_707+162894delAAAAAAAAAAAAAATATATATATA TATA	HS6ST3	ENSG00000185352.10	transcript	ENST00000376705.4	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr13	TogoVar
HS6ST3_chr13_96085107_96844562	96254436	AAAAAAAA others(21): Show AAAAAAAAAAAAAATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01071.hp1 HG01884.hp2 NA18947.hp2 others(2): Show HG01071.hp1 HG01884.hp2 NA18947.hp2 NA19084.hp2 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0012 a0001c0001t0001 a0001c0001t0003 a0001c0001t0012	a0001c0001t0001g0049 a0001c0001t0001g0067 a0001c0001t0001g0068 others(2): Show a0001c0001t0001g0049 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0003g0054 a0001c0001t0012g0080	5	116	0.0431	-28	c.707 others(49): Show c.707+162869_707+162896delAAAAAAAAAAAATATATATATATA TATA	HS6ST3	ENSG00000185352.10	transcript	ENST00000376705.4	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr13	TogoVar
HS6ST3_chr13_96085107_96844562	96254482	TATATATA others(21): Show TATATATATATATATATACACATACATAC	T T	intron_variant intron_variant	MODIFIER	HG00621.hp2 HG02293.hp2 HG00621.hp2 HG02293.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0002 a0001c0001t0003	a0001c0001t0002g0025 a0001c0001t0003g0050 a0001c0001t0002g0025 a0001c0001t0003g0050	2	116	0.0172	-28	c.707 others(49): Show c.707+162915_707+162942delTATATATATATATATACACATACA TACA	HS6ST3	ENSG00000185352.10	transcript	ENST00000376705.4	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr13	TogoVar
HS6ST3_chr13_96085107_96844562	96559071	AATCTATC others(21): Show AATCTATCTATCTATCTATCTATCTATCT	A A	intron_variant intron_variant	MODIFIER	HG01361.hp2 HG01361.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0014	a0001c0001t0014g0090 a0001c0001t0014g0090	1	116	0.0086	-28	c.708 others(49): Show c.708-273392_708-273365delCTATCTATCTATCTATCTATCTAT CTAT	HS6ST3	ENSG00000185352.10	transcript	ENST00000376705.4	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr13	TogoVar
HSD17B12_chr11_43675738_43861615	43817006	ATATCTAT others(21): Show ATATCTATATCTATATCTATATCTATATC	A A	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp1 HG01167.hp2 others(33): Show HG00099.hp2 HG00140.hp1 HG01167.hp2 HG01168.hp2 HG01261.hp1 HG01261.hp2 HG01884.hp2 HG01891.hp2 HG01928.hp2 HG02257.hp1 HG02258.hp1 HG02451.hp1 HG02523.hp2 HG02602.hp1 HG02717.hp2 HG02809.hp1 HG02886.hp2 HG02895.hp2 HG02922.hp1 HG02970.hp1 HG02976.hp2 HG03195.hp2 HG03540.hp1 HG03704.hp2 HG03831.hp2 HG03834.hp2 HG03942.hp1 HG04204.hp1 NA18522.hp1 NA18966.hp2 NA18971.hp1 NA18973.hp1 NA19011.hp1 NA19079.hp2 NA19080.hp2 NA20752.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0001c0007 others(1): Show a0001c0001 a0001c0003 a0001c0007 a0002c0002	a0001c0001t0001 a0001c0003t0001 a0001c0007t0001 others(1): Show a0001c0001t0001 a0001c0003t0001 a0001c0007t0001 a0002c0002t0004	a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0006 others(33): Show a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0126 a0001c0001t0001g0187 a0001c0001t0001g0209 a0001c0001t0001g0210 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0213 a0001c0001t0001g0214 a0001c0001t0001g0215 a0001c0001t0001g0216 a0001c0001t0001g0217 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0221 a0001c0001t0001g0222 a0001c0001t0001g0223 a0001c0001t0001g0224 a0001c0001t0001g0225 a0001c0001t0001g0227 a0001c0001t0001g0230 a0001c0003t0001g0226 a0001c0003t0001g0228 a0001c0003t0001g0233 a0001c0003t0001g0273 a0001c0007t0001g0232 a0002c0002t0004g0206 a0002c0002t0004g0275	36	280	0.1286	-28	c.501 others(43): Show c.501+619_501+646delCTATATCTATATCTATATCTATATCTAT	HSD17B12	ENSG00000149084.13	transcript	ENST00000278353.10	protein_coding	6/10		INFO_REALIGN_3_PRIME	chr11	TogoVar
HSD17B8_chr6_33199655_33211831	33203338	AATCAGAA others(21): Show AATCAGAAAGTCTGTGGAAAGGACCTCTG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18984.hp1 NA18992.hp1 NA18993.hp1 others(2): Show NA18984.hp1 NA18992.hp1 NA18993.hp1 NA19002.hp1 NA19085.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0002	5	403	0.0124	-28	c.-13 others(39): Show c.-1330_-1303delATCAGAAAGTCTGTGGAAAGGACCTCTG	HSD17B8	ENSG00000204228.4	transcript	ENST00000374662.4	protein_coding		1316		chr6	TogoVar
HSP90AA1_chr14_102075742_102092044	102085549	CCACCACA others(21): Show CCACCACAGCAGAACCTTTTGGGCAAGGT	C C	intron_variant intron_variant	MODIFIER	HG01496.hp2 HG01496.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0009 a0001c0002t0009	a0001c0002t0009g0051 a0001c0002t0009g0051	1	398	0.0025	-28	c.530 others(43): Show c.530-146_530-119delACCTTGCCCAAAAGGTTCTGCTGTGGTG	HSP90AA1	ENSG00000080824.19	transcript	ENST00000216281.13	protein_coding	3/10			chr14	TogoVar
HSPA12A_chr10_116666192_116747566	116740669	TGTGTGTC others(21): Show TGTGTGTCTGTGTGTGTGTGTGTGTGTGC	T T	intron_variant intron_variant	MODIFIER	HG02976.hp2 HG02976.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0007 a0001c0001t0001g0007	1	320	0.0031	-28	c.40+ others(43): Show c.40+1733_40+1760delGCACACACACACACACACACAGACACAC	HSPA12A	ENSG00000165868.16	transcript	ENST00000369209.8	protein_coding	1/11			chr10	TogoVar
HSPA4L_chr4_127777322_127845733	127827691	TTGTTTTC others(21): Show TTGTTTTCTTCCTAGAGATTTCATTTTTA	T T	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02630.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0046 a0001c0001t0046	a0001c0001t0046g0092 a0001c0001t0046g0092	1	340	0.0029	-28	c.216 others(45): Show c.2166+274_2166+301delCTTCCTAGAGATTTCATTTTTATGTTTT	HSPA4L	ENSG00000164070.12	transcript	ENST00000296464.9	protein_coding	17/18		INFO_REALIGN_3_PRIME	chr4	TogoVar
HSPA4_chr5_133047013_133111449	133109797	ATAAAAAA others(21): Show ATAAAAAAAAAAAATAAAAAAAAAAAAGC	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01256.hp1 HG01256.hp2 HG01515.hp2 others(3): Show HG01256.hp1 HG01256.hp2 HG01515.hp2 NA18960.hp1 NA18973.hp1 NA18983.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0030 a0001c0002t0002 a0001c0002t0030	a0001c0002t0002g0008 a0001c0002t0002g0035 a0001c0002t0002g0044 others(3): Show a0001c0002t0002g0008 a0001c0002t0002g0035 a0001c0002t0002g0044 a0001c0002t0002g0045 a0001c0002t0002g0065 a0001c0002t0030g0001	6	364	0.0165	-28	c.53 others(39): Show c.5362_*5389delTAAAAAAAAAAAATAAAAAAAAAAAAGC	HSPA4	ENSG00000170606.16	transcript	ENST00000304858.7	protein_coding		3349		chr5	TogoVar
HSPBP1_chr19_55257223_55285110	55268729	GTGGCAGT others(21): Show GTGGCAGTTGGCTCACTGCGACATACGTC	G G	intron_variant intron_variant	MODIFIER	NA18747.hp2 NA18946.hp2 NA19012.hp1 others(1): Show NA18747.hp2 NA18946.hp2 NA19012.hp1 NA19054.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0023 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0023 a0001c0001t0001g0073 a0001c0001t0001g0074	4	314	0.0127	-28	c.641 others(45): Show c.641-2471_641-2444delGACGTATGTCGCAGTGAGCCAACTGCCA	HSPBP1	ENSG00000133265.11	transcript	ENST00000433386.7	protein_coding	4/7			chr19	TogoVar
HTR1F_chr3_87787706_87998839	87844931	TGTAGCCT others(21): Show TGTAGCCTTGTAGTATAGTTTGAAGTCAG	T T	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02257.hp2 HG02717.hp2 others(2): Show HG02055.hp2 HG02257.hp2 HG02717.hp2 HG02976.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0001 a0001c0001t0004	a0001c0001t0001g0101 a0001c0001t0001g0103 a0001c0001t0001g0104 others(2): Show a0001c0001t0001g0101 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0004g0102	5	250	0.0200	-28	c.-43 others(47): Show c.-43+22812_-43+22839delCCTTGTAGTATAGTTTGAAGTCAGGT AG	HTR1F	ENSG00000179097.7	transcript	ENST00000319595.7	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr3	TogoVar
HTR2C_chrX_114579086_114915061	114761881	ATATATAT others(21): Show ATATATATGTGTATATATACATATATGTG	A A	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02615.hp2 HG02886.hp1 others(5): Show HG02572.hp1 HG02615.hp2 HG02886.hp1 HG02896.hp2 HG02897.hp2 HG03041.hp2 HG03098.hp1 NA19240.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0004 a0002c0002t0002 a0002c0002t0004	a0002c0002t0002g0012 a0002c0002t0002g0013 a0002c0002t0002g0014 others(5): Show a0002c0002t0002g0012 a0002c0002t0002g0013 a0002c0002t0002g0014 a0002c0002t0002g0015 a0002c0002t0004g0166 a0002c0002t0004g0167 a0002c0002t0004g0168 a0002c0002t0004g0169	8	176	0.0455	-28	c.349 others(47): Show c.349+30282_349+30309delGTGTATATATACATATATGTGTATAT AT	HTR2C	ENSG00000147246.10	transcript	ENST00000276198.6	protein_coding	4/5		INFO_REALIGN_3_PRIME	chrX	TogoVar
HTR2C_chrX_114579086_114915061	114764909	TTCTTTCT others(21): Show TTCTTTCTTTCTTTCTTTTCCTTCCTTCC	T T	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG01256.hp1 HG03017.hp1 others(1): Show HG00733.hp1 HG01256.hp1 HG03017.hp1 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0106 a0001c0001t0001g0145 a0001c0001t0001g0160 others(1): Show a0001c0001t0001g0106 a0001c0001t0001g0145 a0001c0001t0001g0160 a0001c0001t0002g0024	4	176	0.0227	-28	c.349 others(47): Show c.349+33304_349+33331delCTTTCTTTCTTTCTTTTCCTTCCTTC CT	HTR2C	ENSG00000147246.10	transcript	ENST00000276198.6	protein_coding	4/5		INFO_REALIGN_3_PRIME	chrX	TogoVar
HTR2C_chrX_114579086_114915061	114806715	GATATATA others(21): Show GATATATACACCATATATATACACACCAT	G G	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG02055.hp1 HG02257.hp2 others(2): Show HG00280.hp1 HG02055.hp1 HG02257.hp2 HG02300.hp2 HG03239.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0017 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0017 a0002c0002t0005 a0002c0002t0012	a0001c0001t0001g0093 a0001c0001t0002g0025 a0001c0001t0017g0112 others(2): Show a0001c0001t0001g0093 a0001c0001t0002g0025 a0001c0001t0017g0112 a0002c0002t0005g0055 a0002c0002t0012g0003	5	176	0.0284	-28	c.350 others(47): Show c.350-41249_350-41222delCATATATATACACACCATATATATAC AC	HTR2C	ENSG00000147246.10	transcript	ENST00000276198.6	protein_coding	4/5		INFO_REALIGN_3_PRIME	chrX	TogoVar
HUNK_chr21_31868020_32009064	31918956	TGAGGGGC others(21): Show TGAGGGGCTGGACTGAGCGGTATGAGGAG	T T	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01109.hp2	a0004 a0004	a0004c0010 a0004c0010	a0004c0010t0018 a0004c0010t0018	a0004c0010t0018g0328 a0004c0010t0018g0328	1	328	0.0031	-28	c.262 others(45): Show c.262-5428_262-5401delGGAGGGGCTGGACTGAGCGGTATGAGGA	HUNK	ENSG00000142149.9	transcript	ENST00000270112.7	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr21	TogoVar
HUNK_chr21_31868020_32009064	31919096	GGAGGGGC others(21): Show GGAGGGGCTGGACTGAGCGGTATGAGGAT	G G	intron_variant intron_variant	MODIFIER	HG01952.hp1 HG01975.hp2 HG02622.hp2 others(3): Show HG01952.hp1 HG01975.hp2 HG02622.hp2 HG02886.hp1 HG02896.hp2 HG03540.hp1	a0001 a0001	a0001c0007 a0001c0012 a0001c0013 a0001c0007 a0001c0012 a0001c0013	a0001c0007t0005 a0001c0007t0006 a0001c0012t0067 others(1): Show a0001c0007t0005 a0001c0007t0006 a0001c0012t0067 a0001c0013t0029	a0001c0007t0005g0082 a0001c0007t0005g0083 a0001c0007t0005g0085 others(3): Show a0001c0007t0005g0082 a0001c0007t0005g0083 a0001c0007t0005g0085 a0001c0007t0006g0051 a0001c0012t0067g0086 a0001c0013t0029g0084	6	328	0.0183	-28	c.262 others(45): Show c.262-5344_262-5317delTGAGGGGCTGGACTGAGCGGTATGAGGA	HUNK	ENSG00000142149.9	transcript	ENST00000270112.7	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr21	TogoVar
HUNK_chr21_31868020_32009064	31919124	TGAGGGGC others(21): Show TGAGGGGCTGGACTGAGCGGTATGAGGAG	T T	intron_variant intron_variant	MODIFIER	HG04115.hp1 HG04228.hp2 HG04115.hp1 HG04228.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0014 a0001c0002t0021 a0001c0002t0014 a0001c0002t0021	a0001c0002t0014g0220 a0001c0002t0021g0313 a0001c0002t0014g0220 a0001c0002t0021g0313	2	328	0.0061	-28	c.262 others(45): Show c.262-5317_262-5290delAGGAGGGGCTGGACTGAGCGGTATGAGG	HUNK	ENSG00000142149.9	transcript	ENST00000270112.7	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr21	TogoVar
HUNK_chr21_31868020_32009064	31919208	GGAGGGGC others(21): Show GGAGGGGCTGGAATGAGTGGTATGAGGAT	G G	intron_variant intron_variant	MODIFIER	NA19030.hp1 NA19030.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0009 a0001c0002t0005g0009	1	328	0.0031	-28	c.262 others(45): Show c.262-5248_262-5221delATGAGTGGTATGAGGATGAGGGGCTGGA	HUNK	ENSG00000142149.9	transcript	ENST00000270112.7	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr21	TogoVar
HYAL1_chr3_50294893_50308574	50304288	AAAAAAAA others(21): Show AAAAAAAAAATATATATATATATATATAT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01952.hp2 HG01952.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	384	0.0026	-28	c.-87 others(37): Show c.-875_-848delATATATATATATATATATATTTTTTTTT	HYAL1	ENSG00000114378.17	transcript	ENST00000395144.7	protein_coding		715		chr3	TogoVar
HYAL1_chr3_50294893_50308574	50304290	AAAAAAAA others(21): Show AAAAAAAATATATATATATATATATATAT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00408.hp1 HG00544.hp1 HG00544.hp2 others(2): Show HG00408.hp1 HG00544.hp1 HG00544.hp2 NA18980.hp1 NA18993.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	5	384	0.0130	-28	c.-87 others(37): Show c.-877_-850delATATATATATATATATATATATTTTTTT	HYAL1	ENSG00000114378.17	transcript	ENST00000395144.7	protein_coding		717		chr3	TogoVar
HYAL1_chr3_50294893_50308574	50304292	AAAAAATA others(21): Show AAAAAATATATATATATATATATATATAT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18949.hp1 NA18966.hp1 NA19060.hp1 others(1): Show NA18949.hp1 NA18966.hp1 NA19060.hp1 NA19077.hp1	a0001 a0009 a0001 a0009	a0001c0001 a0009c0009 a0001c0001 a0009c0009	a0001c0001t0001 a0009c0009t0001 a0001c0001t0001 a0009c0009t0001	a0001c0001t0001g0001 a0009c0009t0001g0019 a0001c0001t0001g0001 a0009c0009t0001g0019	4	384	0.0104	-28	c.-87 others(37): Show c.-879_-852delATATATATATATATATATATATATTTTT	HYAL1	ENSG00000114378.17	transcript	ENST00000395144.7	protein_coding		719		chr3	TogoVar
HYAL3_chr3_50287832_50304405	50304288	AAAAAAAA others(21): Show AAAAAAAAAATATATATATATATATATAT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01952.hp1 NA18974.hp1 HG01952.hp1 NA18974.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0003 a0001c0001t0002g0003	2	378	0.0053	-28	c.-51 others(39): Show c.-5121_-5094delATATATATATATATATATATTTTTTTTT	HYAL3	ENSG00000186792.17	transcript	ENST00000336307.6	protein_coding		4884		chr3	TogoVar
HYAL3_chr3_50287832_50304405	50304290	AAAAAAAA others(21): Show AAAAAAAATATATATATATATATATATAT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00408.hp1 HG00544.hp1 HG00544.hp2 HG00408.hp1 HG00544.hp1 HG00544.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0003 a0001c0001t0002g0003	3	378	0.0079	-28	c.-51 others(39): Show c.-5123_-5096delATATATATATATATATATATATTTTTTT	HYAL3	ENSG00000186792.17	transcript	ENST00000336307.6	protein_coding		4886		chr3	TogoVar
HYAL3_chr3_50287832_50304405	50304292	AAAAAATA others(21): Show AAAAAATATATATATATATATATATATAT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18966.hp1 NA18993.hp1 NA19060.hp1 others(1): Show NA18966.hp1 NA18993.hp1 NA19060.hp1 NA19077.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0003 a0001c0001t0002g0010 a0001c0001t0002g0003 a0001c0001t0002g0010	4	378	0.0106	-28	c.-51 others(39): Show c.-5125_-5098delATATATATATATATATATATATATTTTT	HYAL3	ENSG00000186792.17	transcript	ENST00000336307.6	protein_coding		4888		chr3	TogoVar
HYAL4_chr7_123840169_123882481	123857669	GTTTCTTT others(21): Show GTTTCTTTCTTTCTTTCTTTCTTTCTTTC	G G	intron_variant intron_variant	MODIFIER	HG03927.hp1 HG03927.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0116 a0001c0001t0001g0116	1	394	0.0025	-28	c.-52 others(45): Show c.-52+9548_-52+9575delTTTCTTTCTTTCTTTCTTTCTTTCTTTC	HYAL4	ENSG00000106302.10	transcript	ENST00000223026.9	protein_coding	2/4		INFO_REALIGN_3_PRIME	chr7	TogoVar
HYCC1_chr7_22929211_23019130	22997986	AATTAGAA others(21): Show AATTAGAAGGTAAGAAGTTCTTTCTTCTC	A A	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01243.hp1 HG01255.hp2 others(2): Show HG00639.hp2 HG01243.hp1 HG01255.hp2 HG02717.hp2 HG03041.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0016 a0001c0001t0002 a0001c0001t0016	a0001c0001t0002g0064 a0001c0001t0002g0066 a0001c0001t0002g0068 others(2): Show a0001c0001t0002g0064 a0001c0001t0002g0066 a0001c0001t0002g0068 a0001c0001t0016g0065 a0001c0001t0016g0342	5	386	0.0130	-28	c.-28 others(45): Show c.-28-6875_-28-6848delGAGAAGAAAGAACTTCTTACCTTCTAAT	HYCC1	ENSG00000122591.13	transcript	ENST00000432176.7	protein_coding	1/10			chr7	TogoVar
HYDIN_chr16_70797084_71235722	70864330	CAAAAAAA others(21): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02809.hp2 HG02970.hp2 others(1): Show HG02559.hp1 HG02809.hp2 HG02970.hp2 HG03579.hp1	a0001 a0016 a0037 a0001 a0016 a0037	a0001c0058 a0016c0023 a0037c0074 a0001c0058 a0016c0023 a0037c0074	a0001c0058t0009 a0016c0023t0009 a0037c0074t0009 a0001c0058t0009 a0016c0023t0009 a0037c0074t0009	a0001c0058t0009g0027 a0016c0023t0009g0044 a0016c0023t0009g0045 others(1): Show a0001c0058t0009g0027 a0016c0023t0009g0044 a0016c0023t0009g0045 a0037c0074t0009g0067	4	174	0.0230	-28	c.114 others(49): Show c.11472-1176_11472-1149delTTTTTTTTTTTTTTTTTTTTTTTT TTTT	HYDIN	ENSG00000157423.18	transcript	ENST00000393567.7	protein_coding	67/85			chr16	TogoVar
IAH1_chr2_9469551_9494742	9487811	TGTGTGTG others(21): Show TGTGTGTGTGTGTGTGTGTGTGTGCGCGC	T T	intron_variant intron_variant	MODIFIER	HG01192.hp2 HG01192.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0082 a0001c0001t0005g0082	1	342	0.0029	-28	c.565 others(43): Show c.565-334_565-307delTGTGTGTGTGTGTGTGTGTGTGCGCGCG	IAH1	ENSG00000134330.19	transcript	ENST00000497473.6	protein_coding	5/5		INFO_REALIGN_3_PRIME	chr2	TogoVar
IBA57_chr1_228160804_228187257	228172384	TCTCAGCT others(21): Show TCTCAGCTGTAAAATCGTGTCATTTCAGG	T T	intron_variant intron_variant	MODIFIER	NA18959.hp1 NA18959.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0058 a0001c0001t0058	a0001c0001t0058g0216 a0001c0001t0058g0216	1	416	0.0024	-28	c.342 others(45): Show c.342-2307_342-2280delCTCAGCTGTAAAATCGTGTCATTTCAGG	IBA57	ENSG00000181873.13	transcript	ENST00000366711.4	protein_coding	1/2			chr1	TogoVar
IBSP_chr4_87794554_87817435	87813979	CATATATA others(21): Show CATATATATATATATATATATATATATAT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01257.hp2 HG01258.hp1 HG02735.hp2 HG01257.hp2 HG01258.hp1 HG02735.hp2	a0001 a0006 a0001 a0006	a0001c0001 a0006c0006 a0001c0001 a0006c0006	a0001c0001t0001 a0006c0006t0001 a0001c0001t0001 a0006c0006t0001	a0001c0001t0001g0009 a0006c0006t0001g0012 a0001c0001t0001g0009 a0006c0006t0001g0012	3	454	0.0066	-28	c.20 others(39): Show c.2070_*2097delATATATATATATATATATATATATATAT	IBSP	ENSG00000029559.7	transcript	ENST00000226284.7	protein_coding		1545		chr4	TogoVar
ICAM2_chr17_63997595_64025633	63999745	GCATGCGT others(21): Show GCATGCGTGTGTGTGTGCAAGGCTGTGTA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG04199.hp1 HG04199.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0121 a0001c0001t0001g0121	1	392	0.0026	-28	c.29 others(39): Show c.2974_*3001delTACACAGCCTTGCACACACACACGCATG	ICAM2	ENSG00000108622.11	transcript	ENST00000579788.6	protein_coding		2849		chr17	TogoVar
ICAM2_chr17_63997595_64025633	64014702	GAAGGAAG others(21): Show GAAGGAAGGAAGGAAGGAAGGAAGAAAGA	G G	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00423.hp1 HG00642.hp1 others(85): Show HG00099.hp2 HG00423.hp1 HG00642.hp1 HG00733.hp2 HG00738.hp1 HG01069.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01081.hp1 HG01099.hp2 HG01168.hp1 HG01169.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp1 HG01258.hp1 HG01346.hp1 HG01515.hp2 HG01516.hp2 HG01975.hp1 HG01978.hp2 HG01981.hp1 HG02004.hp2 HG02040.hp1 HG02055.hp2 HG02109.hp1 HG02129.hp1 HG02129.hp2 HG02155.hp1 HG02273.hp1 HG02273.hp2 HG02735.hp2 HG03239.hp2 HG03669.hp1 HG03688.hp2 HG03831.hp2 HG03942.hp2 HG04204.hp1 NA18612.hp1 NA18612.hp2 NA18939.hp2 NA18943.hp1 NA18943.hp2 NA18945.hp2 NA18951.hp2 NA18953.hp1 NA18956.hp2 NA18957.hp1 NA18959.hp1 NA18966.hp1 NA18967.hp1 NA18969.hp2 NA18973.hp1 NA18974.hp2 NA18975.hp1 NA18980.hp1 NA18982.hp1 NA18983.hp1 NA18984.hp1 NA18986.hp2 NA18990.hp2 NA18993.hp1 NA18999.hp1 NA19000.hp1 NA19001.hp1 NA19006.hp1 NA19006.hp2 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19056.hp1 NA19062.hp1 NA19063.hp2 NA19066.hp1 NA19068.hp2 NA19070.hp1 NA19074.hp2 NA19079.hp2 NA19085.hp1 NA19087.hp2 NA19088.hp1 NA19090.hp1 NA19091.hp1 NA19240.hp2 NA20752.hp2 NA20805.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0001 a0001c0005t0001 a0001c0001t0001 a0001c0005t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(61): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0066 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0111 a0001c0001t0001g0112 a0001c0001t0001g0123 a0001c0001t0001g0127 a0001c0001t0001g0134 a0001c0001t0001g0138 a0001c0001t0001g0144 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0160 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0173 a0001c0001t0001g0177 a0001c0001t0001g0178 a0001c0001t0001g0179 a0001c0001t0001g0180 a0001c0001t0001g0181 a0001c0001t0001g0190 a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0001g0194 a0001c0001t0001g0195 a0001c0001t0001g0196 a0001c0001t0001g0197 a0001c0001t0001g0198 a0001c0001t0001g0199 a0001c0001t0001g0200 a0001c0001t0001g0201 a0001c0001t0001g0205 a0001c0001t0001g0206 a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0209 a0001c0001t0001g0211 a0001c0001t0001g0262 a0001c0001t0001g0271 a0001c0001t0001g0279 a0001c0001t0001g0280 a0001c0001t0001g0293 a0001c0001t0001g0294 a0001c0001t0001g0296 a0001c0001t0001g0298 a0001c0005t0001g0270	88	392	0.2245	-28	c.-45 others(45): Show c.-45+5793_-45+5820delTCTTTCTTCCTTCCTTCCTTCCTTCCTT	ICAM2	ENSG00000108622.11	transcript	ENST00000579788.6	protein_coding	1/4			chr17	TogoVar
ICAM2_chr17_63997595_64025633	64014706	GAAGGAAG others(21): Show GAAGGAAGGAAGGAAGGAAGAAAGAAAGA	G G	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG00735.hp1 HG01256.hp2 others(17): Show HG00609.hp1 HG00735.hp1 HG01256.hp2 HG01433.hp2 HG01515.hp1 HG01517.hp1 HG01891.hp1 HG02109.hp2 HG02257.hp1 HG02738.hp2 HG02922.hp2 HG02976.hp1 HG03098.hp2 HG03130.hp2 HG03239.hp1 NA18956.hp1 NA18961.hp2 NA18974.hp1 NA18993.hp2 NA19088.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0002c0003t0001 a0001c0001t0001 a0002c0003t0001	a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 others(17): Show a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0038 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0070 a0001c0001t0001g0104 a0001c0001t0001g0117 a0001c0001t0001g0141 a0001c0001t0001g0183 a0001c0001t0001g0203 a0001c0001t0001g0204 a0001c0001t0001g0217 a0001c0001t0001g0247 a0001c0001t0001g0268 a0002c0003t0001g0248	20	392	0.0510	-28	c.-45 others(45): Show c.-45+5789_-45+5816delTCTTTCTTTCTTCCTTCCTTCCTTCCTT	ICAM2	ENSG00000108622.11	transcript	ENST00000579788.6	protein_coding	1/4			chr17	TogoVar
ICAM2_chr17_63997595_64025633	64014710	GAAGGAAG others(21): Show GAAGGAAGGAAGGAAGAAAGAAAGAAAGA	G G	intron_variant intron_variant	MODIFIER	HG03942.hp1 NA18977.hp1 NA18977.hp2 others(1): Show HG03942.hp1 NA18977.hp1 NA18977.hp2 NA19068.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0231 a0001c0001t0001g0232 a0001c0001t0001g0233 others(1): Show a0001c0001t0001g0231 a0001c0001t0001g0232 a0001c0001t0001g0233 a0001c0001t0001g0234	4	392	0.0102	-28	c.-45 others(45): Show c.-45+5785_-45+5812delTCTTTCTTTCTTTCTTCCTTCCTTCCTT	ICAM2	ENSG00000108622.11	transcript	ENST00000579788.6	protein_coding	1/4			chr17	TogoVar
IDNK_chr9_83618143_83649123	83646679	GGGAAGGA others(21): Show GGGAAGGAAGGAAGGAAGGAAGGAAGGAA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01168.hp2 HG01169.hp1 HG01243.hp2 others(14): Show HG01168.hp2 HG01169.hp1 HG01243.hp2 HG01884.hp1 HG02257.hp1 HG02486.hp2 HG02615.hp2 HG02622.hp2 HG02717.hp2 HG02809.hp1 HG02895.hp2 HG02896.hp2 HG02970.hp2 HG03195.hp1 HG03209.hp2 NA18906.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0001 a0001c0001t0004	a0001c0001t0001g0008 a0001c0001t0001g0046 a0001c0001t0001g0047 others(9): Show a0001c0001t0001g0008 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0165 a0001c0001t0001g0181 a0001c0001t0001g0182 a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0004g0046 a0001c0001t0004g0180	17	332	0.0512	-28	c.29 others(39): Show c.2900_*2927delGGAAGGAAGGAAGGAAGGAAGGAAGGAA	IDNK	ENSG00000148057.16	transcript	ENST00000376419.5	protein_coding		2557		chr9	TogoVar
IER3_chr6_30738199_30749547	30746541	AATATATA others(21): Show AATATATATATATATATATATATATATAT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00423.hp2 HG00438.hp1 HG00544.hp1 others(121): Show HG00423.hp2 HG00438.hp1 HG00544.hp1 HG00544.hp2 HG00597.hp1 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00673.hp2 HG01167.hp2 HG01192.hp1 HG01358.hp1 HG01358.hp2 HG01496.hp1 HG01928.hp1 HG01928.hp2 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01981.hp2 HG02004.hp2 HG02056.hp2 HG02071.hp2 HG02074.hp1 HG02129.hp1 HG02135.hp1 HG02135.hp2 HG02155.hp1 HG02165.hp2 HG02257.hp1 HG02273.hp2 HG02293.hp2 HG02523.hp1 HG02683.hp1 HG02698.hp1 HG02738.hp1 HG03239.hp2 HG03491.hp2 HG03492.hp1 HG03540.hp2 HG03688.hp1 HG04115.hp2 HG06807.hp1 NA18612.hp1 NA18747.hp1 NA18939.hp1 NA18940.hp1 NA18940.hp2 NA18941.hp1 NA18942.hp2 NA18943.hp1 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18947.hp1 NA18947.hp2 NA18950.hp2 NA18959.hp1 NA18959.hp2 NA18962.hp2 NA18963.hp1 NA18963.hp2 NA18969.hp2 NA18970.hp1 NA18972.hp1 NA18972.hp2 NA18973.hp2 NA18977.hp1 NA18979.hp2 NA18981.hp2 NA18982.hp2 NA18983.hp1 NA18984.hp1 NA18984.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp1 NA18990.hp2 NA18993.hp1 NA18994.hp1 NA18995.hp1 NA18997.hp2 NA18998.hp2 NA18999.hp2 NA19002.hp1 NA19003.hp1 NA19004.hp1 NA19006.hp1 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp2 NA19054.hp2 NA19055.hp1 NA19057.hp2 NA19062.hp2 NA19064.hp1 NA19064.hp2 NA19066.hp1 NA19072.hp1 NA19079.hp1 NA19080.hp1 NA19082.hp1 NA19082.hp2 NA19083.hp1 NA19083.hp2 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp1 NA19091.hp1 NA19091.hp2 NA20129.hp2 NA20752.hp2 NA20805.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0001 a0003c0003t0006 a0001c0001t0001 a0003c0003t0006	a0001c0001t0001g0001 a0003c0003t0006g0007 a0001c0001t0001g0001 a0003c0003t0006g0007	124	449	0.2762	-28	c.-20 others(39): Show c.-2051_-2024delATATATATATATATATATATATATATAT	IER3	ENSG00000137331.12	transcript	ENST00000259874.6	protein_coding		1995		chr6	TogoVar
IFFO2_chr1_18899280_18961676	18940534	TGGATGGA others(21): Show TGGATGGATGGACAGACTGATGGACAAAC	T T	intron_variant intron_variant	MODIFIER	NA18946.hp2 NA18955.hp2 NA18961.hp1 NA18946.hp2 NA18955.hp2 NA18961.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0008 a0001c0001t0001 a0001c0001t0008	a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0008g0016 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0008g0016	3	376	0.0080	-28	c.665 others(47): Show c.665+15106_665+15133delGTTTGTCCATCAGTCTGTCCATCCAT CC	IFFO2	ENSG00000169991.11	transcript	ENST00000455833.7	protein_coding	1/8			chr1	TogoVar
IFIH1_chr2_162262074_162323684	162321883	CATATATA others(21): Show CATATATATATATATATATATATATATAT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00323.hp2 HG01261.hp1 HG01516.hp1 others(2): Show HG00323.hp2 HG01261.hp1 HG01516.hp1 HG01516.hp2 HG03239.hp1	a0003 a0004 a0003 a0004	a0003c0002 a0004c0006 a0003c0002 a0004c0006	a0003c0002t0001 a0004c0006t0001 a0003c0002t0001 a0004c0006t0001	a0003c0002t0001g0121 a0004c0006t0001g0013 a0004c0006t0001g0062 others(1): Show a0003c0002t0001g0121 a0004c0006t0001g0013 a0004c0006t0001g0062 a0004c0006t0001g0091	5	220	0.0227	-28	c.-36 others(39): Show c.-3604_-3577delATATATATATATATATATATATATATAT	IFIH1	ENSG00000115267.10	transcript	ENST00000649979.2	protein_coding		3200		chr2	TogoVar
IFIH1_chr2_162262074_162323684	162321907	TATATATA others(21): Show TATATATATATATATATATATATATATAC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00738.hp1 HG01069.hp2 HG01106.hp1 others(7): Show HG00738.hp1 HG01069.hp2 HG01106.hp1 HG01192.hp1 HG01257.hp2 HG01496.hp2 HG01928.hp2 HG01981.hp2 HG02004.hp1 NA18962.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0001 a0001c0003t0001g0002 a0001c0003t0001g0025 others(3): Show a0001c0003t0001g0001 a0001c0003t0001g0002 a0001c0003t0001g0025 a0001c0003t0001g0028 a0001c0003t0001g0029 a0001c0003t0001g0030	10	220	0.0455	-28	c.-36 others(39): Show c.-3628_-3601delGTATATATATATATATATATATATATAT	IFIH1	ENSG00000115267.10	transcript	ENST00000649979.2	protein_coding		3224		chr2	TogoVar
IFIT1_chr10_89387623_89411487	89394601	TATATATA others(21): Show TATATATATATATATATATATATATATAA	T T	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00423.hp1 HG00438.hp2 others(113): Show HG00140.hp1 HG00423.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00597.hp1 HG00597.hp2 HG00673.hp2 HG00741.hp1 HG01069.hp2 HG01071.hp1 HG01192.hp2 HG01255.hp2 HG01257.hp1 HG01258.hp2 HG01496.hp2 HG01975.hp1 HG01981.hp2 HG02004.hp2 HG02027.hp2 HG02056.hp1 HG02071.hp1 HG02071.hp2 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02135.hp1 HG02148.hp1 HG02155.hp1 HG02155.hp2 HG02165.hp2 HG02280.hp2 HG02523.hp1 HG02523.hp2 HG02698.hp1 HG02735.hp2 HG02738.hp1 HG02886.hp2 HG03195.hp1 HG03239.hp2 HG03486.hp1 HG03490.hp1 HG03654.hp2 HG03710.hp1 HG03831.hp1 HG04199.hp1 HG04204.hp2 HG04228.hp1 HG06807.hp2 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18940.hp1 NA18940.hp2 NA18943.hp1 NA18944.hp1 NA18948.hp2 NA18949.hp1 NA18951.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18957.hp2 NA18959.hp1 NA18959.hp2 NA18964.hp2 NA18966.hp1 NA18966.hp2 NA18969.hp2 NA18970.hp1 NA18973.hp1 NA18974.hp2 NA18975.hp1 NA18977.hp1 NA18978.hp1 NA18980.hp2 NA18983.hp1 NA18984.hp1 NA18984.hp2 NA18985.hp1 NA18986.hp1 NA18989.hp2 NA18991.hp1 NA18992.hp2 NA18994.hp2 NA18997.hp1 NA19000.hp1 NA19001.hp1 NA19001.hp2 NA19002.hp1 NA19003.hp2 NA19007.hp1 NA19009.hp2 NA19011.hp2 NA19012.hp1 NA19056.hp2 NA19057.hp2 NA19060.hp2 NA19066.hp1 NA19067.hp1 NA19068.hp1 NA19068.hp2 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19079.hp1 NA19081.hp1 NA19081.hp2 NA19082.hp1 NA19085.hp2 NA19086.hp1 NA19091.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0005c0013	a0001c0001t0001 a0001c0002t0002 a0001c0002t0010 others(6): Show a0001c0001t0001 a0001c0002t0002 a0001c0002t0010 a0001c0002t0023 a0001c0002t0026 a0001c0002t0029 a0001c0003t0007 a0001c0003t0016 a0005c0013t0002	a0001c0001t0001g0069 a0001c0002t0002g0001 a0001c0002t0002g0003 others(28): Show a0001c0001t0001g0069 a0001c0002t0002g0001 a0001c0002t0002g0003 a0001c0002t0002g0010 a0001c0002t0002g0017 a0001c0002t0002g0024 a0001c0002t0002g0036 a0001c0002t0002g0055 a0001c0002t0002g0056 a0001c0002t0002g0059 a0001c0002t0002g0060 a0001c0002t0002g0061 a0001c0002t0002g0062 a0001c0002t0002g0066 a0001c0002t0002g0067 a0001c0002t0002g0070 a0001c0002t0002g0071 a0001c0002t0002g0077 a0001c0002t0010g0003 a0001c0002t0023g0001 a0001c0002t0026g0001 a0001c0002t0029g0058 a0001c0003t0007g0013 a0001c0003t0007g0025 a0001c0003t0007g0035 a0001c0003t0007g0063 a0001c0003t0007g0064 a0001c0003t0007g0065 a0001c0003t0007g0076 a0001c0003t0016g0085 a0005c0013t0002g0068	116	430	0.2698	-28	c.5+1 others(41): Show c.5+1886_5+1913delTATATATATATATATATATATATATAAA	IFIT1	ENSG00000185745.10	transcript	ENST00000371804.4	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr10	TogoVar
IFNA1_chr9_21435439_21446316	21443537	AAAAAAAA others(21): Show AAAAAAAAAAAAAAAAAAAAAAAAAAAAC	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02280.hp2 HG02280.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	450	0.0022	-28	c.24 others(39): Show c.2461_*2488delAAAAAAAAAAAAAAAAAAAAAAAAAAAC	IFNA1	ENSG00000197919.6	transcript	ENST00000276927.3	protein_coding		2222		chr9	TogoVar

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