Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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Results per page.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
IFNA4_chr9_21181618_21192587	21184298	TTCCTTCC others(21): Show TTCCTTCCTTCCTTCCTTCCTTCCTTTCC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01123.hp2 HG01123.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0000 a0002c0002t0002g0000	1	428	0.0023	-28	c.26 others(39): Show c.2636_*2663delGGAAAGGAAGGAAGGAAGGAAGGAAGGA	IFNA4	ENSG00000236637.5	transcript	ENST00000421715.3	protein_coding		2319		chr9	TogoVar
IFNA4_chr9_21181618_21192587	21184362	CTTCCTTC others(21): Show CTTCCTTCCTTCCTTCCTTCCTTCCTTCT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00735.hp2 HG01192.hp2 HG01952.hp1 others(12): Show HG00735.hp2 HG01192.hp2 HG01952.hp1 NA18944.hp2 NA18948.hp1 NA18957.hp1 NA18963.hp2 NA18980.hp1 NA18989.hp1 NA18989.hp2 NA19003.hp1 NA19054.hp2 NA19055.hp1 NA19067.hp1 NA19083.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0000 a0002c0002t0002g0000	15	428	0.0351	-28	c.25 others(39): Show c.2572_*2599delAGAAGGAAGGAAGGAAGGAAGGAAGGAA	IFNA4	ENSG00000236637.5	transcript	ENST00000421715.3	protein_coding		2255		chr9	TogoVar
IFNAR1_chr21_33319970_33364864	33322080	CATATGGA others(21): Show CATATGGAATATACATATATGGGACACAT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01109.hp1 HG01168.hp1 HG01928.hp2 others(11): Show HG01109.hp1 HG01168.hp1 HG01928.hp2 HG02698.hp1 HG03017.hp2 HG03669.hp1 HG03942.hp1 NA18955.hp1 NA18975.hp2 NA18998.hp2 NA19004.hp1 NA19007.hp2 NA19085.hp1 NA19088.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0003 a0002c0002t0002 others(2): Show a0001c0001t0001 a0001c0001t0003 a0002c0002t0002 a0002c0002t0006 a0002c0002t0025	a0001c0001t0001g0236 a0001c0001t0003g0026 a0001c0001t0003g0175 others(11): Show a0001c0001t0001g0236 a0001c0001t0003g0026 a0001c0001t0003g0175 a0002c0002t0002g0001 a0002c0002t0002g0208 a0002c0002t0002g0212 a0002c0002t0002g0220 a0002c0002t0002g0226 a0002c0002t0002g0227 a0002c0002t0002g0230 a0002c0002t0002g0231 a0002c0002t0002g0232 a0002c0002t0006g0237 a0002c0002t0025g0031	14	323	0.0433	-28	c.-29 others(39): Show c.-2975_-2948delATATGGAATATACATATATGGGACACAT	IFNAR1	ENSG00000142166.15	transcript	ENST00000270139.8	protein_coding		2889		chr21	TogoVar
IFNAR1_chr21_33319970_33364864	33322395	CTGGAATA others(21): Show CTGGAATATATATATATGGAATATATATA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18962.hp2 NA18962.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0015 a0001c0001t0001g0015	1	323	0.0031	-28	c.-26 others(39): Show c.-2660_-2633delTGGAATATATATATATGGAATATATATA	IFNAR1	ENSG00000142166.15	transcript	ENST00000270139.8	protein_coding		2574		chr21	TogoVar
IFNLR1_chr1_24149168_24192289	24162864	TTTCTTTC others(21): Show TTTCTTTCTTTCTTTCCTTCCTTCCTTCC	T T	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00423.hp2 HG00639.hp1 others(24): Show HG00323.hp2 HG00423.hp2 HG00639.hp1 HG00673.hp1 HG00741.hp1 HG01106.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp2 HG01256.hp2 HG02074.hp1 HG02135.hp1 HG02280.hp2 HG02738.hp2 HG02809.hp2 HG03209.hp1 HG03486.hp2 HG04115.hp2 NA18612.hp2 NA18747.hp1 NA18945.hp1 NA18960.hp1 NA18961.hp1 NA18998.hp1 NA19064.hp2 NA19070.hp1 NA19072.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 others(3): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0002t0002 a0001c0002t0012 a0001c0002t0043	a0001c0001t0002g0103 a0001c0001t0002g0104 a0001c0001t0002g0106 others(21): Show a0001c0001t0002g0103 a0001c0001t0002g0104 a0001c0001t0002g0106 a0001c0001t0002g0135 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0249 a0001c0001t0002g0250 a0001c0001t0002g0251 a0001c0001t0002g0252 a0001c0001t0002g0253 a0001c0001t0002g0268 a0001c0001t0002g0269 a0001c0001t0003g0294 a0001c0001t0005g0004 a0001c0001t0005g0030 a0001c0001t0005g0031 a0001c0001t0005g0032 a0001c0001t0005g0070 a0001c0001t0005g0089 a0001c0002t0002g0154 a0001c0002t0002g0156 a0001c0002t0012g0002 a0001c0002t0043g0192	27	396	0.0682	-28	c.368 others(45): Show c.368-1208_368-1181delGGAAGGAAGGAAGGAAAGAAAGAAAGAA	IFNLR1	ENSG00000185436.12	transcript	ENST00000327535.6	protein_coding	3/6			chr1	TogoVar
IFNLR1_chr1_24149168_24192289	24162868	TTTCTTTC others(21): Show TTTCTTTCTTTCCTTCCTTCCTTCCTTCC	T T	intron_variant intron_variant	MODIFIER	HG02083.hp1 HG02132.hp2 HG02630.hp2 others(5): Show HG02083.hp1 HG02132.hp2 HG02630.hp2 HG03704.hp1 HG03710.hp2 NA18963.hp1 NA18967.hp2 NA19000.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0002 a0001c0001t0003 a0001c0001t0008 others(1): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0008 a0001c0003t0006	a0001c0001t0002g0228 a0001c0001t0002g0231 a0001c0001t0003g0229 others(5): Show a0001c0001t0002g0228 a0001c0001t0002g0231 a0001c0001t0003g0229 a0001c0001t0003g0353 a0001c0001t0003g0354 a0001c0001t0008g0337 a0001c0001t0008g0341 a0001c0003t0006g0186	8	396	0.0202	-28	c.368 others(45): Show c.368-1212_368-1185delGGAAGGAAGGAAGGAAGGAAAGAAAGAA	IFNLR1	ENSG00000185436.12	transcript	ENST00000327535.6	protein_coding	3/6			chr1	TogoVar
IFT140_chr16_1505427_1617072	1528307	ACACACAC others(21): Show ACACACACGCACGCATGCACGCACGTGTG	A A	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02970.hp2 HG03130.hp2 others(5): Show HG02486.hp2 HG02970.hp2 HG03130.hp2 HG04204.hp1 NA18948.hp2 NA19007.hp2 NA19066.hp2 NA19067.hp1	a0003 a0008 a0003 a0008	a0003c0005 a0003c0018 a0008c0015 others(1): Show a0003c0005 a0003c0018 a0008c0015 a0008c0016	a0003c0005t0001 a0003c0018t0001 a0008c0015t0003 others(1): Show a0003c0005t0001 a0003c0018t0001 a0008c0015t0003 a0008c0016t0001	a0003c0005t0001g0143 a0003c0005t0001g0144 a0003c0005t0001g0145 others(5): Show a0003c0005t0001g0143 a0003c0005t0001g0144 a0003c0005t0001g0145 a0003c0018t0001g0133 a0003c0018t0001g0152 a0008c0015t0003g0053 a0008c0015t0003g0055 a0008c0016t0001g0056	8	334	0.0240	-28	c.240 others(47): Show c.2400-1539_2400-1512delCACACGTGCGTGCATGCGTGCGTGTG TG	IFT140	ENSG00000187535.14	transcript	ENST00000426508.7	protein_coding	19/30			chr16	TogoVar
IFT43_chr14_75980763_76088742	76073577	GTGTGTGT others(21): Show GTGTGTGTGTGCGCATGTGCACACATCTC	G G	intron_variant intron_variant	MODIFIER	NA18971.hp2 NA18971.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0309 a0001c0001t0001g0309	1	396	0.0025	-28	c.296 others(45): Show c.296-8707_296-8680delCGCATGTGCACACATCTCTGTGTGTGTG	IFT43	ENSG00000119650.13	transcript	ENST00000314067.11	protein_coding	5/8		INFO_REALIGN_3_PRIME	chr14	TogoVar
IFT81_chr12_110119357_110223793	110179724	TTATATAT others(21): Show TTATATATATATATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG03017.hp1 HG03017.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0091 a0001c0001t0001g0091	1	218	0.0046	-28	c.118 others(45): Show c.1189-675_1189-648delTATATATATATATATATATATATATATA	IFT81	ENSG00000122970.16	transcript	ENST00000242591.10	protein_coding	11/18		INFO_REALIGN_3_PRIME	chr12	TogoVar
IGF1R_chr15_98643539_98969530	98835155	CCCTACAC others(21): Show CCCTACACCCACACACCTTCCCACACAAA	C C	intron_variant intron_variant	MODIFIER	HG02027.hp1 HG02027.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0018 a0001c0002t0018	a0001c0002t0018g0174 a0001c0002t0018g0174	1	210	0.0048	-28	c.641 others(47): Show c.641-56143_641-56116delAACCTACACCCACACACCTTCCCACA CA	IGF1R	ENSG00000140443.15	transcript	ENST00000650285.1	protein_coding	2/20		INFO_REALIGN_3_PRIME	chr15	TogoVar
IGF1_chr12_102390874_102485563	102407094	CAAAAAAA others(21): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0035 a0001c0001t0035	a0001c0001t0035g0073 a0001c0001t0035g0073	1	360	0.0028	-28	c.403 others(45): Show c.403-4556_403-4529delTTTTTTTTTTTTTTTTTTTTTTTTTTTT	IGF1	ENSG00000017427.17	transcript	ENST00000337514.11	protein_coding	3/3			chr12	TogoVar
IGF2BP1_chr17_48992385_49061145	49019904	TTATATAT others(21): Show TTATATATATATATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG03492.hp2 HG02109.hp1 HG03492.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0025 a0001c0001t0003 a0001c0001t0025	a0001c0001t0003g0251 a0001c0001t0025g0066 a0001c0001t0003g0251 a0001c0001t0025g0066	2	318	0.0063	-28	c.237 others(45): Show c.237-5696_237-5669delATATATATATATATATATATATATATAT	IGF2BP1	ENSG00000159217.10	transcript	ENST00000290341.8	protein_coding	2/14		INFO_REALIGN_3_PRIME	chr17	TogoVar
IGF2BP1_chr17_48992385_49061145	49019931	TATATATA others(21): Show TATATATATATATATATATTTATATACAC	T T	intron_variant intron_variant	MODIFIER	NA18947.hp2 NA18978.hp2 NA19007.hp1 NA18947.hp2 NA18978.hp2 NA19007.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0018 a0001c0001t0036 a0001c0001t0018 a0001c0001t0036	a0001c0001t0018g0159 a0001c0001t0018g0161 a0001c0001t0036g0160 a0001c0001t0018g0159 a0001c0001t0018g0161 a0001c0001t0036g0160	3	318	0.0094	-28	c.237 others(45): Show c.237-5685_237-5658delTATATATATATATATATTTATATACACA	IGF2BP1	ENSG00000159217.10	transcript	ENST00000290341.8	protein_coding	2/14		INFO_REALIGN_3_PRIME	chr17	TogoVar
IGF2BP1_chr17_48992385_49061145	49019967	CACACACA others(21): Show CACACACACATACACCCACACATATATAT	C C	intron_variant intron_variant	MODIFIER	HG02970.hp1 HG03130.hp2 HG03225.hp2 HG02970.hp1 HG03130.hp2 HG03225.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0044 a0001c0001t0016 a0001c0001t0044	a0001c0001t0016g0045 a0001c0001t0016g0117 a0001c0001t0044g0039 a0001c0001t0016g0045 a0001c0001t0016g0117 a0001c0001t0044g0039	3	318	0.0094	-28	c.237 others(45): Show c.237-5641_237-5614delTACACCCACACATATATATACACACACA	IGF2BP1	ENSG00000159217.10	transcript	ENST00000290341.8	protein_coding	2/14		INFO_REALIGN_3_PRIME	chr17	TogoVar
IGF2BP2_chr3_185638130_185830042	185677016	TATGGAGA others(21): Show TATGGAGAGAGATATATATATATATGGAG	T T	intron_variant intron_variant	MODIFIER	NA20129.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0019 a0001c0001t0019	a0001c0001t0019g0100 a0001c0001t0019g0100	1	216	0.0046	-28	c.813 others(45): Show c.813-1131_813-1104delCTCCATATATATATATATCTCTCTCCAT	IGF2BP2	ENSG00000073792.16	transcript	ENST00000382199.7	protein_coding	7/15			chr3	TogoVar
IGF2R_chr6_159964082_160116504	159980183	AAAAGAAA others(21): Show AAAAGAAAGAAAGAAAGAAAGAAAGAAAG	A A	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00423.hp2 HG00438.hp2 others(78): Show HG00408.hp1 HG00423.hp2 HG00438.hp2 HG00544.hp1 HG00597.hp2 HG00621.hp1 HG00621.hp2 HG00738.hp1 HG01081.hp1 HG01106.hp2 HG01109.hp1 HG01258.hp2 HG01358.hp1 HG01433.hp2 HG01496.hp1 HG01517.hp2 HG01981.hp1 HG02040.hp1 HG02135.hp1 HG02155.hp2 HG02165.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp2 HG02451.hp2 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02647.hp2 HG02723.hp2 HG02735.hp2 HG02738.hp1 HG02976.hp1 HG03041.hp2 HG03098.hp2 HG03130.hp1 HG03139.hp2 HG03453.hp1 HG03490.hp2 HG03669.hp2 HG03710.hp1 HG03831.hp2 HG03927.hp2 HG04115.hp2 NA18522.hp1 NA18522.hp2 NA18942.hp2 NA18946.hp1 NA18950.hp1 NA18952.hp2 NA18954.hp2 NA18960.hp1 NA18960.hp2 NA18964.hp1 NA18964.hp2 NA18967.hp2 NA18974.hp1 NA18977.hp1 NA18985.hp1 NA18987.hp1 NA18990.hp2 NA18992.hp1 NA18994.hp2 NA18999.hp1 NA19000.hp1 NA19004.hp1 NA19007.hp1 NA19007.hp2 NA19043.hp2 NA19064.hp2 NA19066.hp1 NA19066.hp2 NA19084.hp2 NA19085.hp2 NA19087.hp2 NA19088.hp1 NA19090.hp1 NA19240.hp2 NA20129.hp2 NA20752.hp1 NA21309.hp1	a0001 a0002 a0003 others(12): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007 a0008 a0010 a0012 a0022 a0026 a0028 a0032 a0033	a0001c0001 a0001c0002 a0001c0004 others(22): Show a0001c0001 a0001c0002 a0001c0004 a0001c0005 a0001c0009 a0001c0024 a0001c0039 a0001c0056 a0002c0003 a0002c0052 a0002c0057 a0003c0007 a0003c0012 a0004c0006 a0005c0027 a0006c0010 a0007c0018 a0008c0011 a0010c0016 a0012c0031 a0022c0042 a0026c0054 a0028c0050 a0032c0065 a0033c0064	a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 others(47): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 a0001c0001t0069 a0001c0002t0006 a0001c0002t0018 a0001c0002t0039 a0001c0002t0050 a0001c0002t0056 a0001c0002t0058 a0001c0002t0071 a0001c0004t0001 a0001c0004t0002 a0001c0004t0003 a0001c0004t0046 a0001c0004t0051 a0001c0004t0065 a0001c0004t0066 a0001c0005t0004 a0001c0005t0012 a0001c0009t0001 a0001c0009t0028 a0001c0024t0024 a0001c0039t0045 a0001c0056t0003 a0002c0003t0001 a0002c0003t0014 a0002c0003t0020 a0002c0003t0060 a0002c0003t0061 a0002c0003t0063 a0002c0003t0064 a0002c0052t0008 a0002c0057t0001 a0003c0007t0001 a0003c0012t0006 a0004c0006t0003 a0004c0006t0049 a0005c0027t0003 a0005c0027t0006 a0006c0010t0072 a0007c0018t0019 a0008c0011t0017 a0010c0016t0016 a0012c0031t0019 a0022c0042t0024 a0026c0054t0001 a0028c0050t0025 a0032c0065t0041 a0033c0064t0068	a0001c0001t0001g0187 a0001c0001t0003g0230 a0001c0001t0003g0231 others(77): Show a0001c0001t0001g0187 a0001c0001t0003g0230 a0001c0001t0003g0231 a0001c0001t0006g0219 a0001c0001t0069g0232 a0001c0002t0006g0197 a0001c0002t0006g0198 a0001c0002t0018g0235 a0001c0002t0018g0236 a0001c0002t0018g0237 a0001c0002t0039g0233 a0001c0002t0050g0242 a0001c0002t0056g0156 a0001c0002t0058g0234 a0001c0002t0071g0194 a0001c0004t0001g0222 a0001c0004t0001g0240 a0001c0004t0002g0064 a0001c0004t0002g0065 a0001c0004t0003g0203 a0001c0004t0003g0210 a0001c0004t0003g0223 a0001c0004t0046g0273 a0001c0004t0051g0178 a0001c0004t0065g0200 a0001c0004t0066g0174 a0001c0005t0004g0021 a0001c0005t0012g0209 a0001c0009t0001g0181 a0001c0009t0001g0211 a0001c0009t0028g0229 a0001c0024t0024g0201 a0001c0039t0045g0228 a0001c0056t0003g0154 a0002c0003t0001g0001 a0002c0003t0001g0002 a0002c0003t0001g0175 a0002c0003t0001g0179 a0002c0003t0001g0186 a0002c0003t0001g0199 a0002c0003t0001g0202 a0002c0003t0001g0204 a0002c0003t0001g0206 a0002c0003t0001g0208 a0002c0003t0001g0212 a0002c0003t0001g0218 a0002c0003t0001g0220 a0002c0003t0001g0224 a0002c0003t0001g0225 a0002c0003t0001g0241 a0002c0003t0001g0277 a0002c0003t0014g0173 a0002c0003t0014g0177 a0002c0003t0020g0278 a0002c0003t0060g0215 a0002c0003t0061g0182 a0002c0003t0063g0207 a0002c0003t0064g0213 a0002c0052t0008g0023 a0002c0057t0001g0243 a0003c0007t0001g0205 a0003c0012t0006g0284 a0003c0012t0006g0285 a0004c0006t0003g0216 a0004c0006t0003g0217 a0004c0006t0049g0226 a0005c0027t0003g0003 a0005c0027t0006g0155 a0006c0010t0072g0196 a0007c0018t0019g0238 a0007c0018t0019g0239 a0008c0011t0017g0152 a0008c0011t0017g0195 a0010c0016t0016g0150 a0012c0031t0019g0165 a0022c0042t0024g0151 a0026c0054t0001g0214 a0028c0050t0025g0227 a0032c0065t0041g0283 a0033c0064t0068g0221	81	310	0.2613	-28	c.149 others(47): Show c.149+10817_149+10844delAAAGAAAGAAAGAAAGAAAGAAAGAA AG	IGF2R	ENSG00000197081.16	transcript	ENST00000356956.6	protein_coding	1/47		INFO_REALIGN_3_PRIME	chr6	TogoVar
IGF2R_chr6_159964082_160116504	160100723	CCTTTTTT others(21): Show CCTTTTTTTTTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01261.hp1 HG01261.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0142 a0001c0001t0002g0142	1	310	0.0032	-28	c.684 others(47): Show c.6843-1795_6843-1768delCTTTTTTTTTTTTTTTTTTTTTTTTT TT	IGF2R	ENSG00000197081.16	transcript	ENST00000356956.6	protein_coding	45/47			chr6	TogoVar
IGF2_chr11_2124117_2144389	2131997	GTGTGTGT others(21): Show GTGTGTGTGCTGTGTGCTCATCTGTGTGC	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA19085.hp1 NA19085.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0090 a0001c0001t0090	a0001c0001t0090g0089 a0001c0001t0090g0089	1	388	0.0026	-28	c.96 others(37): Show c.962_*989delGCACACAGATGAGCACACAGCACACACA	IGF2	ENSG00000167244.22	transcript	ENST00000416167.7	protein_coding	4/4	962		chr11	TogoVar
IGSF21_chr1_18102798_18383483	18359367	AAAGAAAG others(21): Show AAAGAAAGAAAGAAAGAAAGGAAGGAAGG	A A	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0105 a0001c0001t0009g0105	1	248	0.0040	-28	c.425 others(45): Show c.425-2744_425-2717delAAAGAAAGAAAGAAAGGAAGGAAGGAAG	IGSF21	ENSG00000117154.12	transcript	ENST00000251296.4	protein_coding	4/9		INFO_REALIGN_3_PRIME	chr1	TogoVar
IGSF21_chr1_18102798_18383483	18359371	AAAGAAAG others(21): Show AAAGAAAGAAAGAAAGGAAGGAAGGAAGG	A A	intron_variant intron_variant	MODIFIER	HG01070.hp2 HG01071.hp2 HG02630.hp2 HG01070.hp2 HG01071.hp2 HG02630.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0009 a0003c0003t0002 a0001c0001t0009 a0003c0003t0002	a0001c0001t0009g0032 a0003c0003t0002g0027 a0003c0003t0002g0028 a0001c0001t0009g0032 a0003c0003t0002g0027 a0003c0003t0002g0028	3	248	0.0121	-28	c.425 others(45): Show c.425-2740_425-2713delAAAGAAAGAAAGGAAGGAAGGAAGGAAG	IGSF21	ENSG00000117154.12	transcript	ENST00000251296.4	protein_coding	4/9		INFO_REALIGN_3_PRIME	chr1	TogoVar
IGSF21_chr1_18102798_18383483	18372838	ATGGATGG others(21): Show ATGGATGGATGGATGGATGGATGGATGGG	A A	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00597.hp2 HG01069.hp2 others(31): Show HG00408.hp2 HG00597.hp2 HG01069.hp2 HG01071.hp1 HG01081.hp1 HG01109.hp1 HG01168.hp2 HG01255.hp2 HG01346.hp1 HG01361.hp1 HG01361.hp2 HG01515.hp2 HG01884.hp1 HG01934.hp2 HG02040.hp2 HG02055.hp1 HG02257.hp2 HG02258.hp1 HG02300.hp2 HG02622.hp2 HG02717.hp1 HG02723.hp2 HG02886.hp2 HG03209.hp1 HG03471.hp1 HG03654.hp1 HG04204.hp2 NA18612.hp2 NA18747.hp2 NA18950.hp1 NA18986.hp2 NA19056.hp1 NA19079.hp2 NA20300.hp2	a0001 a0006 a0001 a0006	a0001c0001 a0006c0007 a0001c0001 a0006c0007	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0008 a0001c0001t0013 a0001c0001t0024 a0006c0007t0001	a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0039 others(31): Show a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0039 a0001c0001t0001g0043 a0001c0001t0001g0064 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0089 a0001c0001t0001g0092 a0001c0001t0001g0106 a0001c0001t0001g0133 a0001c0001t0001g0135 a0001c0001t0001g0142 a0001c0001t0002g0090 a0001c0001t0002g0112 a0001c0001t0002g0123 a0001c0001t0003g0170 a0001c0001t0003g0175 a0001c0001t0003g0181 a0001c0001t0003g0186 a0001c0001t0003g0187 a0001c0001t0003g0196 a0001c0001t0003g0198 a0001c0001t0003g0199 a0001c0001t0003g0212 a0001c0001t0003g0216 a0001c0001t0004g0211 a0001c0001t0008g0234 a0001c0001t0008g0238 a0001c0001t0008g0242 a0001c0001t0013g0015 a0001c0001t0013g0093 a0001c0001t0024g0244 a0006c0007t0001g0065	34	248	0.1371	-28	c.101 others(47): Show c.1016-3445_1016-3418delGGTGGATGGATGGATGGATGGATGGA TG	IGSF21	ENSG00000117154.12	transcript	ENST00000251296.4	protein_coding	6/9		INFO_REALIGN_3_PRIME	chr1	TogoVar
IGSF9B_chr11_133891438_133961968	133918503	GGGCGGCC others(21): Show GGGCGGCCGCGGCACCTCCGCGCACAGGC	G G	intron_variant intron_variant	MODIFIER	NA21309.hp1 NA21309.hp1	a0001 a0001	a0001c0034 a0001c0034	a0001c0034t0066 a0001c0034t0066	a0001c0034t0066g0037 a0001c0034t0066g0037	1	362	0.0028	-28	c.398 others(47): Show c.3983+1211_3983+1238delGCCTGTGCGCGGAGGTGCCGCGGCCG CC	IGSF9B	ENSG00000080854.16	transcript	ENST00000533871.8	protein_coding	18/19			chr11	TogoVar
IL16_chr15_81191879_81319058	81279276	TATCTATT others(21): Show TATCTATTCATCCATCTATCTATCCATCC	T T	intron_variant intron_variant	MODIFIER	NA18981.hp2 NA18981.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0012	a0001c0001t0012g0127 a0001c0001t0012g0127	1	342	0.0029	-28	c.865 others(43): Show c.865-257_865-230delATCCATCTATTCATCCATCTATCTATCC	IL16	ENSG00000172349.19	transcript	ENST00000683961.1	protein_coding	7/18		INFO_REALIGN_3_PRIME	chr15	TogoVar
IL17D_chr13_20698699_20728098	20703439	CCCCGGGT others(21): Show CCCCGGGTACGAGGAAAGACCACAGGGGG	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19003.hp1 NA19003.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0151 a0001c0001t0002g0151	1	346	0.0029	-28	c.-56 others(37): Show c.-562_-535delCCCGGGTACGAGGAAAGACCACAGGGGG	IL17D	ENSG00000172458.5	transcript	ENST00000682841.1	protein_coding		259		chr13	TogoVar
IL17RA_chr22_17080000_17120693	17087426	TCCATAAC others(21): Show TCCATAACTATCCTCAGACAGGGAGGAGG	T T	intron_variant intron_variant	MODIFIER	NA18953.hp1 NA18953.hp1	a0003 a0003	a0003c0002 a0003c0002	a0003c0002t0004 a0003c0002t0004	a0003c0002t0004g0119 a0003c0002t0004g0119	1	416	0.0024	-28	c.138 others(45): Show c.138+2199_138+2226delCATAACTATCCTCAGACAGGGAGGAGGC	IL17RA	ENSG00000177663.15	transcript	ENST00000319363.11	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr22	TogoVar
IL17REL_chr22_49986811_50017765	50010765	CGGCACGG others(21): Show CGGCACGGGGAGCGGGACCCGGGCGCGCT	C C	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01346.hp1 HG01496.hp1 others(13): Show HG01070.hp1 HG01346.hp1 HG01496.hp1 HG02258.hp1 HG02451.hp2 HG02630.hp1 HG02896.hp2 HG02897.hp1 HG02970.hp2 HG03130.hp2 HG03139.hp1 HG03195.hp2 HG03486.hp2 NA18522.hp1 NA18906.hp2 NA20805.hp1	a0001 a0008 a0001 a0008	a0001c0001 a0001c0012 a0008c0011 a0001c0001 a0001c0012 a0008c0011	a0001c0001t0001 a0001c0001t0007 a0001c0001t0010 others(4): Show a0001c0001t0001 a0001c0001t0007 a0001c0001t0010 a0001c0001t0013 a0001c0001t0044 a0001c0012t0025 a0008c0011t0025	a0001c0001t0001g0061 a0001c0001t0007g0022 a0001c0001t0007g0023 others(9): Show a0001c0001t0001g0061 a0001c0001t0007g0022 a0001c0001t0007g0023 a0001c0001t0007g0062 a0001c0001t0007g0063 a0001c0001t0010g0060 a0001c0001t0010g0064 a0001c0001t0013g0044 a0001c0001t0013g0045 a0001c0001t0044g0065 a0001c0012t0025g0317 a0008c0011t0025g0318	16	440	0.0364	-28	c.102 others(45): Show c.102+1752_102+1779delAGCGCGCCCGGGTCCCGCTCCCCGTGCC	IL17REL	ENSG00000188263.11	transcript	ENST00000695950.1	protein_coding	1/14			chr22	TogoVar
IL1B_chr2_112824751_112841779	112838757	TTCTTTCT others(21): Show TTCTTTCTTTCTTCCTTTCTTTCTCTTTC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18943.hp2 NA18971.hp1 NA18988.hp1 others(2): Show NA18943.hp2 NA18971.hp1 NA18988.hp1 NA19055.hp1 NA19079.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0011	5	448	0.0112	-28	c.-20 others(39): Show c.-2093_-2066delGAAAGAGAAAGAAAGGAAGAAAGAAAGA	IL1B	ENSG00000125538.12	transcript	ENST00000263341.7	protein_coding		1979		chr2	TogoVar
IL1RAPL1_chrX_28582446_29961718	28737114	TTTCCTTC others(21): Show TTTCCTTCCTTCCTTCCTTCCTTCCTTCC	T T	intron_variant intron_variant	MODIFIER	HG02040.hp1 HG02886.hp1 HG02040.hp1 HG02886.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0076 a0001c0001t0001g0108 a0001c0001t0001g0076 a0001c0001t0001g0108	2	135	0.0148	-28	c.-24 others(47): Show c.-24-52167_-24-52140delCCTTCCTTCCTTCCTTCCTTCCTTCC TT	IL1RAPL1	ENSG00000169306.11	transcript	ENST00000378993.6	protein_coding	1/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL1_chrX_28582446_29961718	28762811	CACACACA others(21): Show CACACACACACACAGAGAGAGAGAGAGAG	C C	intron_variant intron_variant	MODIFIER	HG03654.hp1 HG03688.hp1 HG03654.hp1 HG03688.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0071 a0001c0001t0001g0072	2	135	0.0148	-28	c.-24 others(47): Show c.-24-26507_-24-26480delCACACACACACAGAGAGAGAGAGAGA GA	IL1RAPL1	ENSG00000169306.11	transcript	ENST00000378993.6	protein_coding	1/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL1_chrX_28582446_29961718	28762813	CACACACA others(21): Show CACACACACACAGAGAGAGAGAGAGAGAG	C C	intron_variant intron_variant	MODIFIER	HG01069.hp1 HG01243.hp1 HG01255.hp1 others(28): Show HG01069.hp1 HG01243.hp1 HG01255.hp1 HG01258.hp1 HG01928.hp1 HG02027.hp1 HG02040.hp1 HG02056.hp1 HG02074.hp1 HG02723.hp2 HG02738.hp1 HG03492.hp1 HG04204.hp1 NA18612.hp1 NA18944.hp1 NA18953.hp1 NA18955.hp1 NA18966.hp1 NA18970.hp1 NA18977.hp1 NA18988.hp1 NA18994.hp1 NA19005.hp1 NA19007.hp1 NA19012.hp1 NA19043.hp1 NA19058.hp1 NA19060.hp1 NA19066.hp1 NA20300.hp2 NA20752.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0004 a0003c0003 a0001c0001 a0002c0004 a0003c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0006 a0001c0001t0007 a0001c0001t0010 a0001c0001t0015 a0002c0004t0002 a0003c0003t0001	a0001c0001t0001g0004 a0001c0001t0001g0064 a0001c0001t0001g0075 others(28): Show a0001c0001t0001g0004 a0001c0001t0001g0064 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0093 a0001c0001t0001g0095 a0001c0001t0001g0104 a0001c0001t0001g0111 a0001c0001t0001g0113 a0001c0001t0001g0118 a0001c0001t0001g0129 a0001c0001t0002g0010 a0001c0001t0002g0011 a0001c0001t0002g0012 a0001c0001t0002g0021 a0001c0001t0002g0027 a0001c0001t0002g0028 a0001c0001t0002g0047 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0004g0085 a0001c0001t0004g0124 a0001c0001t0006g0098 a0001c0001t0007g0107 a0001c0001t0010g0036 a0001c0001t0015g0046 a0002c0004t0002g0044 a0003c0003t0001g0088	31	135	0.2296	-28	c.-24 others(47): Show c.-24-26505_-24-26478delCACACACACAGAGAGAGAGAGAGAGA GA	IL1RAPL1	ENSG00000169306.11	transcript	ENST00000378993.6	protein_coding	1/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL1_chrX_28582446_29961718	28762815	CACACACA others(21): Show CACACACACAGAGAGAGAGAGAGAGAGAG	C C	intron_variant intron_variant	MODIFIER	HG02083.hp1 HG02083.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0092 a0001c0001t0001g0092	1	135	0.0074	-28	c.-24 others(47): Show c.-24-26503_-24-26476delCACACACAGAGAGAGAGAGAGAGAGA GA	IL1RAPL1	ENSG00000169306.11	transcript	ENST00000378993.6	protein_coding	1/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL1_chrX_28582446_29961718	28819967	GATATATA others(21): Show GATATATATATATATATATATATATATAT	G G	intron_variant intron_variant	MODIFIER	HG02723.hp2 NA20300.hp1 HG02723.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0121 a0001c0001t0002g0047 a0001c0001t0001g0121 a0001c0001t0002g0047	2	135	0.0148	-28	c.82+ others(45): Show c.82+30562_82+30589delTATATATATATATATATATATATATATA	IL1RAPL1	ENSG00000169306.11	transcript	ENST00000378993.6	protein_coding	2/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL1_chrX_28582446_29961718	28955473	GATCCAGT others(21): Show GATCCAGTTTCAGCTTTCTACATAGGGCT	G G	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02280.hp2 HG02055.hp1 HG02280.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0008 a0001c0001t0004 a0001c0001t0008	a0001c0001t0004g0079 a0001c0001t0008g0059 a0001c0001t0004g0079 a0001c0001t0008g0059	2	135	0.0148	-28	c.82+ others(47): Show c.82+166050_82+166077delTCCAGTTTCAGCTTTCTACATAGGGC TA	IL1RAPL1	ENSG00000169306.11	transcript	ENST00000378993.6	protein_coding	2/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL1_chrX_28582446_29961718	29240202	ATATATAT others(21): Show ATATATATATATATATATATATATTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02055.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0079 a0001c0001t0004g0079	1	135	0.0074	-28	c.83- others(45): Show c.83-42734_83-42707delATATATATATATATATATATATTTTTTT	IL1RAPL1	ENSG00000169306.11	transcript	ENST00000378993.6	protein_coding	2/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL1_chrX_28582446_29961718	29323709	TTTTTTAT others(21): Show TTTTTTATATATATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG01109.hp1 HG02056.hp1 others(3): Show HG00280.hp1 HG01109.hp1 HG02056.hp1 HG02486.hp1 NA20752.hp1 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 a0001c0001t0009	a0001c0001t0001g0063 a0001c0001t0001g0075 a0001c0001t0002g0017 others(3): Show a0001c0001t0001g0063 a0001c0001t0001g0075 a0001c0001t0002g0017 a0001c0001t0003g0042 a0001c0001t0006g0098 a0001c0001t0009g0089	6	135	0.0444	-28	c.362 others(47): Show c.362+40494_362+40521delTTTTATATATATATATATATATATAT AT	IL1RAPL1	ENSG00000169306.11	transcript	ENST00000378993.6	protein_coding	3/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL1_chrX_28582446_29961718	29323713	TTATATAT others(21): Show TTATATATATATATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	NA18988.hp1 NA18988.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0111 a0001c0001t0001g0111	1	135	0.0074	-28	c.362 others(47): Show c.362+40540_362+40567delATATATATATATATATATATATATAT AT	IL1RAPL1	ENSG00000169306.11	transcript	ENST00000378993.6	protein_coding	3/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL1_chrX_28582446_29961718	29802763	ATATATAT others(21): Show ATATATATATATATATATATGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02572.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0051 a0001c0001t0011g0051	1	135	0.0074	-28	c.779 others(49): Show c.779-114675_779-114648delGTGTATATATATATATATATATGT GTGT	IL1RAPL1	ENSG00000169306.11	transcript	ENST00000378993.6	protein_coding	6/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL1_chrX_28582446_29961718	29803310	CATGTATA others(21): Show CATGTATATATGTATACATGTATACACAT	C C	intron_variant intron_variant	MODIFIER	HG02027.hp1 NA18984.hp1 NA19000.hp1 HG02027.hp1 NA18984.hp1 NA19000.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0020 a0001c0001t0002g0022 a0001c0001t0002g0054 a0001c0001t0002g0020 a0001c0001t0002g0022 a0001c0001t0002g0054	3	135	0.0222	-28	c.779 others(49): Show c.779-114085_779-114058delATACATGTATACACATATGTATAT ATGT	IL1RAPL1	ENSG00000169306.11	transcript	ENST00000378993.6	protein_coding	6/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAPL2_chrX_104561199_105772829	104786919	TTCTCTCT others(21): Show TTCTCTCTCTCTCTCTCTCTCTCTCTCTC	T T	intron_variant intron_variant	MODIFIER	NA18612.hp1 NA18612.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0008 a0001c0002t0001g0008	1	141	0.0071	-28	c.82+ others(47): Show c.82+127961_82+127988delTCTCTCTCTCTCTCTCTCTCTCTCTC TC	IL1RAPL2	ENSG00000189108.14	transcript	ENST00000372582.6	protein_coding	2/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
IL1RAP_chr3_190509085_190656514	190522289	GCTTCCTT others(21): Show GCTTCCTTCCTTCCTTCCTTCCTTCCTTC	G G	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00738.hp2 HG01167.hp1 others(19): Show HG00280.hp2 HG00738.hp2 HG01167.hp1 HG01169.hp1 HG01433.hp1 HG01516.hp1 HG02258.hp2 HG02486.hp2 HG02559.hp1 HG02572.hp1 HG02615.hp1 HG02622.hp1 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG02976.hp2 HG03139.hp1 HG03471.hp2 HG03516.hp2 NA18906.hp2 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0001 a0001c0001t0005 a0001c0001t0010 others(4): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0010 a0001c0001t0011 a0001c0001t0016 a0001c0002t0003 a0001c0003t0004	a0001c0001t0001g0022 a0001c0001t0001g0155 a0001c0001t0001g0156 others(19): Show a0001c0001t0001g0022 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0163 a0001c0001t0001g0167 a0001c0001t0001g0170 a0001c0001t0005g0023 a0001c0001t0005g0154 a0001c0001t0010g0151 a0001c0001t0011g0165 a0001c0001t0011g0166 a0001c0001t0016g0157 a0001c0002t0003g0153 a0001c0002t0003g0161 a0001c0002t0003g0164 a0001c0002t0003g0168 a0001c0003t0004g0152 a0001c0003t0004g0162 a0001c0003t0004g0169	22	270	0.0815	-28	c.-89 others(45): Show c.-89+8097_-89+8124delTCCTTCCTTCCTTCCTTCCTTCCTTCCT	IL1RAP	ENSG00000196083.11	transcript	ENST00000447382.6	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
IL23R_chr1_67161454_67264979	67227940	ATCTTTCT others(21): Show ATCTTTCTTTCTTTCTTTCTTTCTTTCTT	A A	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0013 a0004c0004t0013	a0004c0004t0013g0057 a0004c0004t0013g0057	1	290	0.0035	-28	c.955 others(45): Show c.955+8263_955+8290delTCTTTCTTTCTTTCTTTCTTTCTTTCTT	IL23R	ENSG00000162594.17	transcript	ENST00000347310.10	protein_coding	7/10		INFO_REALIGN_3_PRIME	chr1	TogoVar
IL26_chr12_68196349_68230810	68210338	CAAAAAAA others(21): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02080.hp2 HG02080.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0066 a0001c0001t0002g0066	1	402	0.0025	-28	c.364 others(45): Show c.364-8283_364-8256delTTTTTTTTTTTTTTTTTTTTTTTTTTTT	IL26	ENSG00000111536.5	transcript	ENST00000229134.5	protein_coding	3/4			chr12	TogoVar
IL27RA_chr19_14026762_14058218	14048678	GTGGATAA others(21): Show GTGGATAAATACCCCAGCTCCGTCCCCCT	G G	intron_variant intron_variant	MODIFIER	NA19081.hp1 NA19081.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0220 a0002c0002t0001g0220	1	402	0.0025	-28	c.114 others(45): Show c.1142-302_1142-275delTGGATAAATACCCCAGCTCCGTCCCCCT	IL27RA	ENSG00000104998.4	transcript	ENST00000263379.4	protein_coding	8/13			chr19	TogoVar
IL2RA_chr10_6005689_6067367	6031442	GTATATAT others(21): Show GTATATATATATACATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00741.hp2 HG01257.hp2 others(24): Show HG00140.hp1 HG00741.hp2 HG01257.hp2 HG01258.hp2 HG01346.hp1 HG01346.hp2 HG01515.hp1 HG01928.hp2 HG01943.hp2 HG02572.hp2 HG02615.hp2 HG02735.hp1 HG02886.hp1 HG02897.hp1 HG03654.hp1 NA18612.hp2 NA18906.hp2 NA18941.hp1 NA18967.hp1 NA18970.hp2 NA18990.hp1 NA18990.hp2 NA19012.hp2 NA19077.hp1 NA20300.hp1 NA21309.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(9): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0014 a0001c0001t0020 a0001c0001t0027 a0001c0002t0003 a0001c0002t0005 a0001c0003t0002	a0001c0001t0001g0006 a0001c0001t0001g0042 a0001c0001t0001g0044 others(22): Show a0001c0001t0001g0006 a0001c0001t0001g0042 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0053 a0001c0001t0001g0059 a0001c0001t0001g0305 a0001c0001t0001g0368 a0001c0001t0001g0390 a0001c0001t0003g0079 a0001c0001t0004g0020 a0001c0001t0006g0013 a0001c0001t0006g0232 a0001c0001t0007g0049 a0001c0001t0008g0060 a0001c0001t0014g0127 a0001c0001t0014g0205 a0001c0001t0020g0248 a0001c0001t0027g0231 a0001c0002t0003g0245 a0001c0002t0003g0247 a0001c0002t0005g0251 a0001c0002t0005g0255 a0001c0002t0005g0263 a0001c0003t0002g0033	27	414	0.0652	-28	c.65- others(43): Show c.65-5445_65-5418delTATATATATATATATGTATATATATATA	IL2RA	ENSG00000134460.19	transcript	ENST00000379959.8	protein_coding	1/7			chr10	TogoVar
IL2RA_chr10_6005689_6067367	6031466	ATATATAT others(21): Show ATATATATATATATATATATATATATATG	A A	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02257.hp2 HG03041.hp1 others(1): Show HG01243.hp1 HG02257.hp2 HG03041.hp1 NA18940.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0012 a0001c0001t0001 a0001c0001t0012	a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0267 others(1): Show a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0267 a0001c0001t0012g0086	4	414	0.0097	-28	c.65- others(43): Show c.65-5469_65-5442delCATATATATATATATATATATATATATA	IL2RA	ENSG00000134460.19	transcript	ENST00000379959.8	protein_coding	1/7			chr10	TogoVar
IL2_chr4_122446470_122461725	122448201	AGAGAGAG others(21): Show AGAGAGAGAGAGAGAGAGAGAGAGAGAGT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01106.hp2 HG01257.hp2 HG01258.hp1 others(8): Show HG01106.hp2 HG01257.hp2 HG01258.hp1 HG01515.hp1 HG01517.hp1 HG02109.hp2 HG03490.hp2 HG03492.hp1 HG04115.hp2 HG04204.hp1 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0005 a0001c0001t0001g0005	11	434	0.0254	-28	c.35 others(39): Show c.3523_*3550delACTCTCTCTCTCTCTCTCTCTCTCTCTC	IL2	ENSG00000109471.5	transcript	ENST00000226730.5	protein_coding		3268		chr4	TogoVar
IL33_chr9_6210807_6262983	6252043	ACAAACAA others(21): Show ACAAACAAACAAACAAAAAAAAACCCAAC	A A	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02572.hp1 HG02647.hp2 others(2): Show HG02055.hp2 HG02572.hp1 HG02647.hp2 HG02886.hp1 HG03540.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0004	a0001c0002t0004g0191 a0001c0002t0004g0193 a0001c0002t0004g0194 others(2): Show a0001c0002t0004g0191 a0001c0002t0004g0193 a0001c0002t0004g0194 a0001c0002t0004g0196 a0001c0002t0004g0325	5	362	0.0138	-28	c.343 others(43): Show c.343+779_344-795delCAAACAAACAAACAAAAAAAAACCCAAC	IL33	ENSG00000137033.12	transcript	ENST00000682010.1	protein_coding	4/7			chr9	TogoVar
IL3RA_chrX_1331785_1387689	1353948	CCCCCCCA others(21): Show CCCCCCCATCATGGGTCGTGGGACCCCCA	C C	intron_variant intron_variant	MODIFIER	HG03098.hp2 HG03098.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0097 a0001c0001t0007g0097	1	115	0.0087	-28	c.616 others(45): Show c.616+1448_616+1475delCATCATGGGTCGTGGGACCCCCACCCCC	IL3RA	ENSG00000185291.12	transcript	ENST00000331035.10	protein_coding	6/11		INFO_REALIGN_3_PRIME	chrX	TogoVar
IL3RA_chrX_1331785_1387689	1356852	ATTTTTTC others(21): Show ATTTTTTCTTGAACTTTCTTTTTTCTTTT	A A	intron_variant intron_variant	MODIFIER	NA18940.hp2 NA18940.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0049 a0001c0001t0002g0049	1	115	0.0087	-28	c.732 others(43): Show c.732+517_732+544delTTTTTTCTTGAACTTTCTTTTTTCTTTT	IL3RA	ENSG00000185291.12	transcript	ENST00000331035.10	protein_coding	7/11			chrX	TogoVar
IL4_chr5_132668989_132687678	132683729	CTGTGTGT others(21): Show CTGTGTGTGTGTGTGTGTGTGTGTGTGTG	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp2 HG00597.hp2 HG01074.hp2 others(13): Show HG00099.hp2 HG00597.hp2 HG01074.hp2 HG01496.hp2 HG02015.hp1 HG02922.hp1 HG02922.hp2 HG03139.hp2 HG06807.hp2 NA18954.hp2 NA18960.hp1 NA19012.hp2 NA19057.hp2 NA19080.hp2 NA19081.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0001t0001 a0001c0001t0002 a0001c0002t0001	a0001c0001t0001g0002 a0001c0001t0001g0005 a0001c0001t0001g0010 others(9): Show a0001c0001t0001g0002 a0001c0001t0001g0005 a0001c0001t0001g0010 a0001c0001t0001g0012 a0001c0001t0001g0041 a0001c0001t0001g0077 a0001c0001t0001g0090 a0001c0001t0001g0108 a0001c0001t0002g0001 a0001c0001t0002g0006 a0001c0001t0002g0053 a0001c0002t0001g0128	16	422	0.0379	-28	c.11 others(39): Show c.1143_*1170delTGTGTGTGTGTGTGTGTGTGTGTGTGTG	IL4	ENSG00000113520.11	transcript	ENST00000231449.7	protein_coding		1052		chr5	TogoVar

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