Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	external
LOC400499_chr16_11367015_11532247	11496949	GTGTGGGT others(21): Show GTGTGGGTGTGTGTCCGTGCATTTCCCCA	G G	intron_variant intron_variant	MODIFIER	HG01496.hp2 HG01496.hp2	a0208 a0208	a0208c0187 a0208c0187	a0208c0187t0002 a0208c0187t0002	a0208c0187t0002g0051 a0208c0187t0002g0051	1	310	0.0032	-28	c.124 others(47): Show c.1246-2217_1246-2190delTGGGGAAATGCACGGACACACACCCA CA		LOC400499	ENSG00000188897.10	transcript	ENST00000696174.1	protein_coding	10/66						chr16	TogoVar
LONP1_chr19_5686834_5725146	5716259	CATATATA others(21): Show CATATATATATATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG02258.hp2 NA18747.hp2 HG02258.hp2 NA18747.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0212 a0001c0001t0001g0266 a0001c0001t0001g0212 a0001c0001t0001g0266	2	386	0.0052	-28	c.430 others(45): Show c.430-2016_430-1989delATATATATATATATATATATATATATAT		LONP1	ENSG00000196365.12	transcript	ENST00000360614.8	protein_coding	1/17						chr19	TogoVar
LONRF1_chr8_12716906_12760526	12758797	CTCTCTCT others(21): Show CTCTCTCTCTATATATATATATATATATA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01361.hp2 HG01361.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0004 a0001c0001t0001g0004	1	404	0.0025	-28	c.-34 others(39): Show c.-3405_-3378delTATATATATATATATATATAGAGAGAGA		LONRF1	ENSG00000154359.13	transcript	ENST00000398246.8	protein_coding					3272		chr8	TogoVar
LONRF3_chrX_118969618_119023355	119000775	TTCTCTCT others(21): Show TTCTCTCTCTCTCTCTCTCTCTCTCTCTC	T T	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00438.hp1 HG01358.hp1 others(17): Show HG00323.hp2 HG00438.hp1 HG01358.hp1 HG01884.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02717.hp1 HG02723.hp1 HG02818.hp1 HG02818.hp2 HG03453.hp1 HG03471.hp1 HG03540.hp2 NA18955.hp1 NA18956.hp2 NA19011.hp1 NA19090.hp2 NA19091.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 a0001c0001 a0001c0002 a0001c0004	a0001c0001t0001 a0001c0002t0001 a0001c0002t0003 others(3): Show a0001c0001t0001 a0001c0002t0001 a0001c0002t0003 a0001c0002t0006 a0001c0002t0008 a0001c0004t0001	a0001c0001t0001g0007 a0001c0001t0001g0209 a0001c0001t0001g0210 others(15): Show a0001c0001t0001g0007 a0001c0001t0001g0209 a0001c0001t0001g0210 a0001c0001t0001g0231 a0001c0001t0001g0240 a0001c0001t0001g0241 a0001c0001t0001g0254 a0001c0002t0001g0049 a0001c0002t0001g0185 a0001c0002t0003g0187 a0001c0002t0003g0188 a0001c0002t0006g0184 a0001c0002t0008g0186 a0001c0004t0001g0051 a0001c0004t0001g0095 a0001c0004t0001g0192 a0001c0004t0001g0197 a0001c0004t0001g0279	20	309	0.0647	-28	c.141 others(47): Show c.1416-5309_1416-5282delTCTCTCTCTCTCTCTCTCTCTCTCTC TC		LONRF3	ENSG00000175556.17	transcript	ENST00000371628.8	protein_coding	5/10					INFO_REALIGN_3_PRIME	chrX	TogoVar
LORICRIN_chr1_153254687_153267124	153255338	AAGAAATG others(21): Show AAGAAATGAAATCTCAGACTGGGGCCCAG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01258.hp2 HG01258.hp2	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0001 a0004c0004t0001	a0004c0004t0001g0001 a0004c0004t0001g0001	1	422	0.0024	-28	c.-44 others(39): Show c.-4418_-4391delAGAAATGAAATCTCAGACTGGGGCCCAG		LORICRIN	ENSG00000203782.6	transcript	ENST00000368742.4	protein_coding					4348		chr1	TogoVar
LOXL3_chr2_74527258_74558942	74550609	GTTCTGAT others(21): Show GTTCTGATCAGTCTCTACCCATTCATTGA	G G	intron_variant intron_variant	MODIFIER	HG02602.hp1 HG02602.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0160 a0001c0001t0001g0160	1	332	0.0030	-28	c.314 others(43): Show c.314-289_314-262delTCAATGAATGGGTAGAGACTGATCAGAA		LOXL3	ENSG00000115318.12	transcript	ENST00000264094.8	protein_coding	2/13						chr2	TogoVar
LPAR1_chr9_110868263_111043470	110892806	AAGGAAGG others(21): Show AAGGAAGGAAGGAAGGAAGGAAGGCAGGC	A A	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG01993.hp2 HG02622.hp1 others(7): Show HG01261.hp2 HG01993.hp2 HG02622.hp1 HG02809.hp2 HG02976.hp1 HG03130.hp2 HG03139.hp2 HG03209.hp1 HG03453.hp2 HG03540.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 others(3): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0001t0008 a0001c0001t0025 a0001c0002t0003	a0001c0001t0001g0246 a0001c0001t0004g0142 a0001c0001t0004g0247 others(7): Show a0001c0001t0001g0246 a0001c0001t0004g0142 a0001c0001t0004g0247 a0001c0001t0004g0276 a0001c0001t0004g0277 a0001c0001t0005g0118 a0001c0001t0008g0005 a0001c0001t0008g0008 a0001c0001t0025g0256 a0001c0002t0003g0092	10	302	0.0331	-28	c.794 others(47): Show c.794-17112_794-17085delGCCTGCCTTCCTTCCTTCCTTCCTTC CT		LPAR1	ENSG00000198121.15	transcript	ENST00000683809.1	protein_coding	5/5						chr9	TogoVar
LPAR1_chr9_110868263_111043470	110977806	AGGAGGGA others(21): Show AGGAGGGAGGGAGGGCGGGAGGGAGGGAG	A A	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02559.hp2 HG02809.hp1 others(1): Show HG02109.hp2 HG02559.hp2 HG02809.hp1 HG03041.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0006 a0001c0001t0015 a0001c0001t0001 a0001c0001t0006 a0001c0001t0015	a0001c0001t0001g0254 a0001c0001t0006g0015 a0001c0001t0015g0248 others(1): Show a0001c0001t0001g0254 a0001c0001t0006g0015 a0001c0001t0015g0248 a0001c0001t0015g0249	4	302	0.0133	-28	c.-18 others(47): Show c.-181-4276_-181-4249delCTCCCTCCCTCCCGCCCTCCCTCCCT CC		LPAR1	ENSG00000198121.15	transcript	ENST00000683809.1	protein_coding	2/5						chr9	TogoVar
LPAR1_chr9_110868263_111043470	111009998	AATATATA others(21): Show AATATATATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02630.hp2 NA19074.hp2 HG02630.hp2 NA19074.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0026 a0001c0002t0003 a0001c0001t0026 a0001c0002t0003	a0001c0001t0026g0128 a0001c0002t0003g0052 a0001c0001t0026g0128 a0001c0002t0003g0052	2	302	0.0066	-28	c.-18 others(49): Show c.-182+26096_-182+26123delATATATATATATATATATATATAT ATAT		LPAR1	ENSG00000198121.15	transcript	ENST00000683809.1	protein_coding	2/5						chr9	TogoVar
LPAR4_chrX_78742720_78763714	78758595	GTAAAGTA others(21): Show GTAAAGTATAACTAAATATAAAAGTGACT	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02280.hp2 HG02280.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0027 a0001c0001t0027	a0001c0001t0027g0001 a0001c0001t0027g0001	1	324	0.0031	-28	c.26 others(39): Show c.2614_*2641delTAAAGTATAACTAAATATAAAAGTGACT		LPAR4	ENSG00000147145.14	transcript	ENST00000614823.5	protein_coding	5/5				2614		chrX	TogoVar
LPP_chr3_188149157_188895671	188250724	CTCTTTCT others(21): Show CTCTTTCTTTCTTTCTTTCTTTCTTTCTT	C C	intron_variant intron_variant	MODIFIER	HG01256.hp2 HG02622.hp2 HG01256.hp2 HG02622.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0051 a0001c0001t0008 a0001c0001t0051	a0001c0001t0008g0065 a0001c0001t0051g0019 a0001c0001t0008g0065 a0001c0001t0051g0019	2	76	0.0263	-28	c.-67 others(47): Show c.-67+25233_-67+25260delTTCTTTCTTTCTTTCTTTCTTTCTTT CT		LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	2/11					INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188433606	GAGAGAGA others(21): Show GAGAGAGAGAGAGAGAGAGAGAGGAGAAA	G G	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03540.hp1 HG03453.hp2 HG03540.hp1	a0002 a0006 a0002 a0006	a0002c0003 a0006c0013 a0002c0003 a0006c0013	a0002c0003t0028 a0006c0013t0003 a0002c0003t0028 a0006c0013t0003	a0002c0003t0028g0061 a0006c0013t0003g0046 a0002c0003t0028g0061 a0006c0013t0003g0046	2	76	0.0263	-28	c.193 others(47): Show c.193+27294_193+27321delAGAGAGAGAGAGAGAGAGAGAGGAGA AA		LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	4/11						chr3	TogoVar
LPP_chr3_188149157_188895671	188462564	ATATATAT others(21): Show ATATATATATATATATATATATGCATGTG	A A	intron_variant intron_variant	MODIFIER	HG01978.hp2 HG02486.hp1 HG02922.hp2 others(2): Show HG01978.hp2 HG02486.hp1 HG02922.hp2 HG03139.hp2 NA18522.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0003 others(1): Show a0001c0001 a0001c0002 a0002c0003 a0002c0014	a0001c0001t0061 a0001c0002t0019 a0002c0003t0052 others(2): Show a0001c0001t0061 a0001c0002t0019 a0002c0003t0052 a0002c0003t0053 a0002c0014t0065	a0001c0001t0061g0023 a0001c0002t0019g0041 a0002c0003t0052g0014 others(2): Show a0001c0001t0061g0023 a0001c0002t0019g0041 a0002c0003t0052g0014 a0002c0003t0053g0010 a0002c0014t0065g0009	5	76	0.0658	-28	c.194 others(47): Show c.194-22026_194-21999delATATATATATATATATATATGCATGT GT		LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	4/11					INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188607390	TATATATA others(21): Show TATATATATATATATATATATATATATAA	T T	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0047 a0001c0002t0047	a0001c0002t0047g0033 a0001c0002t0047g0033	1	76	0.0132	-28	c.430 others(45): Show c.430-1770_430-1743delATATATATATATATATATATATATATAA		LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	6/11						chr3	TogoVar
LPP_chr3_188149157_188895671	188755809	CAAAAAAA others(21): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02886.hp1 HG03139.hp2 HG02886.hp1 HG03139.hp2	a0002 a0002	a0002c0003 a0002c0004 a0002c0003 a0002c0004	a0002c0003t0053 a0002c0004t0033 a0002c0003t0053 a0002c0004t0033	a0002c0003t0053g0010 a0002c0004t0033g0062 a0002c0003t0053g0010 a0002c0004t0033g0062	2	76	0.0263	-28	c.124 others(47): Show c.1241-4275_1241-4248delAAAAAAAAAAAAAAAAAAAAAAAAAA AA		LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	8/11					INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188785428	TATATTCC others(21): Show TATATTCCATCATATATATATATTCCATC	T T	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG00639.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0076 a0001c0002t0001g0076	1	76	0.0132	-28	c.141 others(49): Show c.1410+25151_1410+25178delTCCATCATATATATATATTCCATC ATAT		LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	9/11					INFO_REALIGN_3_PRIME	chr3	TogoVar
LRBA_chr4_150259435_151020284	150445384	TATATATA others(21): Show TATATATATATATATATATATATATATAC	T T	intron_variant intron_variant	MODIFIER	HG03225.hp2 HG03225.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0060 a0001c0001t0003g0060	1	180	0.0056	-28	c.678 others(47): Show c.6781-8548_6781-8521delGTATATATATATATATATATATATAT AT		LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	44/56						chr4	TogoVar
LRCH1_chr13_46548170_46749898	46657500	CTTTTTTT others(21): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	NA18983.hp2 NA18983.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0004 a0001c0003t0004	a0001c0003t0004g0083 a0001c0003t0004g0083	1	274	0.0037	-28	c.452 others(45): Show c.452+7170_452+7197delTTTTTTTTTTTTTTTTTTTTTTTTTTTT		LRCH1	ENSG00000136141.15	transcript	ENST00000389797.8	protein_coding	2/19					INFO_REALIGN_3_PRIME	chr13	TogoVar
LRFN5_chr14_41601876_41909549	41670256	GATATATA others(21): Show GATATATATATATATATATATATATATAT	G G	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02809.hp2 HG03486.hp2 others(2): Show HG02258.hp1 HG02809.hp2 HG03486.hp2 NA18906.hp2 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0005 a0001c0001t0022 a0001c0005t0023 a0001c0001t0005 a0001c0001t0022 a0001c0005t0023	a0001c0001t0005g0001 a0001c0001t0005g0002 a0001c0001t0005g0004 others(2): Show a0001c0001t0005g0001 a0001c0001t0005g0002 a0001c0001t0005g0004 a0001c0001t0022g0003 a0001c0005t0023g0126	5	280	0.0179	-28	c.-19 others(49): Show c.-197+61716_-197+61743delTATATATATATATATATATATATA TATA		LRFN5	ENSG00000165379.14	transcript	ENST00000298119.9	protein_coding	1/5					INFO_REALIGN_3_PRIME	chr14	TogoVar
LRFN5_chr14_41601876_41909549	41808529	TGGAGGAA others(21): Show TGGAGGAAGGAAGGGAGGGATGAAGGAAG	T T	intron_variant intron_variant	MODIFIER	NA18980.hp2 NA18980.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0067 a0001c0002t0001g0067	1	280	0.0036	-28	c.-21 others(47): Show c.-21+41502_-21+41529delGAGGAAGGAAGGGAGGGATGAAGGAA GG		LRFN5	ENSG00000165379.14	transcript	ENST00000298119.9	protein_coding	2/5					INFO_REALIGN_3_PRIME	chr14	TogoVar
LRGUK_chr7_134122340_134269595	134231758	TCCTCCCT others(21): Show TCCTCCCTTCCTTCCTCCGTCCGTCCCTC	T T	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG01952.hp1 HG01993.hp2 others(31): Show HG00408.hp2 HG01952.hp1 HG01993.hp2 HG02080.hp2 HG02155.hp2 HG02280.hp2 HG02293.hp2 HG02451.hp2 HG02622.hp2 HG02647.hp1 HG02976.hp1 HG03453.hp2 HG03486.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp2 HG03654.hp1 HG03834.hp2 HG03927.hp2 NA18943.hp1 NA18946.hp2 NA18948.hp1 NA18960.hp1 NA18979.hp1 NA18999.hp1 NA19000.hp2 NA19004.hp1 NA19007.hp2 NA19054.hp1 NA19060.hp2 NA19062.hp1 NA19091.hp1 NA20129.hp2 NA20300.hp1	a0001 a0007 a0001 a0007	a0001c0001 a0001c0003 a0001c0008 others(1): Show a0001c0001 a0001c0003 a0001c0008 a0007c0011	a0001c0001t0001 a0001c0001t0004 a0001c0003t0003 others(3): Show a0001c0001t0001 a0001c0001t0004 a0001c0003t0003 a0001c0003t0004 a0001c0008t0003 a0007c0011t0003	a0001c0001t0001g0135 a0001c0001t0004g0211 a0001c0001t0004g0212 others(31): Show a0001c0001t0001g0135 a0001c0001t0004g0211 a0001c0001t0004g0212 a0001c0003t0003g0005 a0001c0003t0003g0024 a0001c0003t0003g0110 a0001c0003t0003g0111 a0001c0003t0003g0116 a0001c0003t0003g0127 a0001c0003t0003g0128 a0001c0003t0003g0129 a0001c0003t0003g0130 a0001c0003t0003g0131 a0001c0003t0003g0132 a0001c0003t0003g0133 a0001c0003t0003g0134 a0001c0003t0003g0136 a0001c0003t0003g0137 a0001c0003t0003g0138 a0001c0003t0003g0157 a0001c0003t0003g0200 a0001c0003t0003g0201 a0001c0003t0003g0202 a0001c0003t0003g0220 a0001c0003t0004g0041 a0001c0003t0004g0091 a0001c0003t0004g0112 a0001c0003t0004g0188 a0001c0003t0004g0189 a0001c0008t0003g0010 a0001c0008t0003g0011 a0001c0008t0003g0012 a0007c0011t0003g0117 a0007c0011t0003g0119	34	220	0.1546	-28	c.198 others(47): Show c.1983+9844_1983+9871delCCCTTCCTTCCTCCGTCCGTCCCTCC CT		LRGUK	ENSG00000155530.4	transcript	ENST00000285928.3	protein_coding	16/19					INFO_REALIGN_3_PRIME	chr7	TogoVar
LRIG1_chr3_66373797_66506022	66382776	TGAGTATT others(21): Show TGAGTATTCCTGTTTAAGGTTAAATTTGA	T T	intron_variant intron_variant	MODIFIER	HG01255.hp2 HG02055.hp1 HG03130.hp2 others(1): Show HG01255.hp2 HG02055.hp1 HG03130.hp2 NA20805.hp2	a0002 a0003 a0032 a0002 a0003 a0032	a0002c0001 a0003c0012 a0032c0045 a0002c0001 a0003c0012 a0032c0045	a0002c0001t0001 a0003c0012t0014 a0032c0045t0001 a0002c0001t0001 a0003c0012t0014 a0032c0045t0001	a0002c0001t0001g0121 a0003c0012t0014g0233 a0003c0012t0014g0236 others(1): Show a0002c0001t0001g0121 a0003c0012t0014g0233 a0003c0012t0014g0236 a0032c0045t0001g0120	4	264	0.0152	-28	c.249 others(45): Show c.2491+178_2491+205delTCAAATTTAACCTTAAACAGGAATACTC		LRIG1	ENSG00000144749.14	transcript	ENST00000273261.8	protein_coding	15/18						chr3	TogoVar
LRP11_chr6_149813757_149869359	149847824	TACACACA others(21): Show TACACACACACACACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG01516.hp1 HG01517.hp1 HG03927.hp1 HG01516.hp1 HG01517.hp1 HG03927.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0151 a0001c0001t0001g0199 a0001c0001t0001g0207 a0001c0001t0001g0151 a0001c0001t0001g0199 a0001c0001t0001g0207	3	334	0.0090	-28	c.772 others(45): Show c.772-4728_772-4701delGTGTGTGTGTGTGTGTGTGTGTGTGTGT		LRP11	ENSG00000120256.11	transcript	ENST00000239367.7	protein_coding	2/6						chr6	TogoVar
LRP12_chr8_104484236_104594258	104548600	AATTATAT others(21): Show AATTATATAATTAAATTAATTATATAATT	A A	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00323.hp2 HG00741.hp1 others(17): Show HG00140.hp2 HG00323.hp2 HG00741.hp1 HG01175.hp1 HG01952.hp1 HG01981.hp2 HG01993.hp2 HG02056.hp1 HG02559.hp1 HG02683.hp1 HG02698.hp2 HG02717.hp2 HG02809.hp1 HG02922.hp1 HG03209.hp1 HG03239.hp1 HG03486.hp1 NA18984.hp2 NA19043.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0009 a0001c0001t0037 a0001c0001t0046 others(4): Show a0001c0001t0009 a0001c0001t0037 a0001c0001t0046 a0001c0001t0050 a0001c0002t0014 a0001c0002t0027 a0001c0002t0049	a0001c0001t0009g0118 a0001c0001t0009g0119 a0001c0001t0009g0120 others(17): Show a0001c0001t0009g0118 a0001c0001t0009g0119 a0001c0001t0009g0120 a0001c0001t0009g0121 a0001c0001t0009g0122 a0001c0001t0009g0123 a0001c0001t0009g0124 a0001c0001t0009g0125 a0001c0001t0009g0126 a0001c0001t0009g0127 a0001c0001t0037g0043 a0001c0001t0046g0092 a0001c0001t0050g0133 a0001c0002t0014g0010 a0001c0002t0014g0011 a0001c0002t0014g0012 a0001c0002t0014g0013 a0001c0002t0014g0014 a0001c0002t0027g0009 a0001c0002t0049g0128	20	318	0.0629	-28	c.80- others(45): Show c.80-16665_80-16638delAATTATATAATTAATTTAATTATATAAT		LRP12	ENSG00000147650.12	transcript	ENST00000276654.10	protein_coding	1/6						chr8	TogoVar
LRP1B_chr2_140226423_142136016	140595087	AATATATA others(21): Show AATATATATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	NA18522.hp1 NA18522.hp1	a0001 a0001	a0001c0020 a0001c0020	a0001c0020t0007 a0001c0020t0007	a0001c0020t0007g0019 a0001c0020t0007g0019	1	28	0.0357	-28	c.719 others(47): Show c.7194+3516_7194+3543delATATATATATATATATATATATATAT AT		LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	43/90						chr2	TogoVar
LRP1B_chr2_140226423_142136016	140843057	TTTTTTTT others(21): Show TTTTTTTTTTGTTTTTTTTTTTTTGTTTG	T T	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02630.hp2	a0001 a0001	a0001c0017 a0001c0017	a0001c0017t0006 a0001c0017t0006	a0001c0017t0006g0015 a0001c0017t0006g0015	1	28	0.0357	-28	c.494 others(47): Show c.4940-1993_4940-1966delCAAACAAAAAAAAAAAAACAAAAAAA AA		LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	29/90						chr2	TogoVar
LRP1B_chr2_140226423_142136016	141797146	CATATATA others(21): Show CATATATATATATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02559.hp2	a0001 a0001	a0001c0014 a0001c0014	a0001c0014t0004 a0001c0014t0004	a0001c0014t0004g0002 a0001c0014t0004g0002	1	28	0.0357	-28	c.205 others(47): Show c.205+13105_205+13132delATATATATATATATATATATATATAT AT		LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	2/90						chr2	TogoVar
LRP2_chr2_169122109_169367534	169299070	GGAAAGAA others(21): Show GGAAAGAAAGAAAGAAGGAAAGAAAGAAA	G G	intron_variant intron_variant	MODIFIER	HG01071.hp1 NA18941.hp2 NA18968.hp1 others(2): Show HG01071.hp1 NA18941.hp2 NA18968.hp1 NA18998.hp2 NA19007.hp1	a0002 a0005 a0006 others(2): Show a0002 a0005 a0006 a0007 a0054	a0002c0003 a0005c0131 a0006c0004 others(2): Show a0002c0003 a0005c0131 a0006c0004 a0007c0127 a0054c0138	a0002c0003t0001 a0005c0131t0003 a0006c0004t0003 others(2): Show a0002c0003t0001 a0005c0131t0003 a0006c0004t0003 a0007c0127t0001 a0054c0138t0006	a0002c0003t0001g0194 a0005c0131t0003g0157 a0006c0004t0003g0103 others(2): Show a0002c0003t0001g0194 a0005c0131t0003g0157 a0006c0004t0003g0103 a0007c0127t0001g0178 a0054c0138t0006g0014	5	250	0.0200	-28	c.428 others(45): Show c.428-4388_428-4361delTTTCTTTCTTTCCTTCTTTCTTTCTTTC		LRP2	ENSG00000081479.15	transcript	ENST00000649046.1	protein_coding	4/78						chr2	TogoVar
LRP2_chr2_169122109_169367534	169299086	GGAAAGAA others(21): Show GGAAAGAAAGAAAGAAAGAAAGAAAGAAA	G G	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG03041.hp2 HG06807.hp2 others(2): Show HG02055.hp1 HG03041.hp2 HG06807.hp2 NA19240.hp1 NA21309.hp2	a0003 a0012 a0013 others(2): Show a0003 a0012 a0013 a0067 a0069	a0003c0016 a0012c0095 a0013c0169 others(2): Show a0003c0016 a0012c0095 a0013c0169 a0067c0123 a0069c0114	a0003c0016t0004 a0012c0095t0001 a0013c0169t0004 others(2): Show a0003c0016t0004 a0012c0095t0001 a0013c0169t0004 a0067c0123t0009 a0069c0114t0006	a0003c0016t0004g0126 a0012c0095t0001g0007 a0013c0169t0004g0049 others(2): Show a0003c0016t0004g0126 a0012c0095t0001g0007 a0013c0169t0004g0049 a0067c0123t0009g0078 a0069c0114t0006g0037	5	250	0.0200	-28	c.428 others(45): Show c.428-4404_428-4377delTTTCTTTCTTTCTTTCTTTCTTTCTTTC		LRP2	ENSG00000081479.15	transcript	ENST00000649046.1	protein_coding	4/78						chr2	TogoVar
LRP2_chr2_169122109_169367534	169299131	GAAAGAAA others(21): Show GAAAGAAAGAAAGAAAGAAAGAAAGAAAA	G G	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00558.hp2 HG01074.hp1 others(21): Show HG00323.hp2 HG00558.hp2 HG01074.hp1 HG01081.hp1 HG01192.hp1 HG01257.hp1 HG01496.hp1 HG01884.hp2 HG01891.hp2 HG02071.hp2 HG02257.hp1 HG02257.hp2 HG02572.hp1 HG02572.hp2 HG02886.hp1 HG02976.hp1 HG03225.hp1 HG03453.hp1 HG03516.hp1 HG03579.hp2 NA18946.hp2 NA18949.hp2 NA18964.hp2 NA18971.hp2	a0001 a0003 a0008 others(9): Show a0001 a0003 a0008 a0010 a0012 a0014 a0015 a0017 a0020 a0031 a0041 a0065	a0001c0002 a0001c0010 a0001c0018 others(19): Show a0001c0002 a0001c0010 a0001c0018 a0001c0039 a0001c0048 a0003c0019 a0003c0028 a0003c0056 a0003c0059 a0003c0094 a0008c0012 a0008c0104 a0010c0008 a0010c0029 a0012c0103 a0014c0026 a0015c0146 a0017c0062 a0020c0083 a0031c0053 a0041c0041 a0065c0176	a0001c0002t0001 a0001c0010t0001 a0001c0010t0007 others(21): Show a0001c0002t0001 a0001c0010t0001 a0001c0010t0007 a0001c0018t0001 a0001c0039t0001 a0001c0048t0002 a0003c0019t0004 a0003c0028t0004 a0003c0028t0006 a0003c0056t0008 a0003c0059t0013 a0003c0094t0003 a0008c0012t0008 a0008c0104t0012 a0010c0008t0003 a0010c0029t0002 a0012c0103t0001 a0014c0026t0005 a0015c0146t0004 a0017c0062t0004 a0020c0083t0007 a0031c0053t0003 a0041c0041t0002 a0065c0176t0015	a0001c0002t0001g0222 a0001c0010t0001g0168 a0001c0010t0007g0167 others(21): Show a0001c0002t0001g0222 a0001c0010t0001g0168 a0001c0010t0007g0167 a0001c0018t0001g0208 a0001c0039t0001g0020 a0001c0048t0002g0041 a0003c0019t0004g0224 a0003c0028t0004g0227 a0003c0028t0006g0153 a0003c0056t0008g0068 a0003c0059t0013g0223 a0003c0094t0003g0120 a0008c0012t0008g0213 a0008c0104t0012g0131 a0010c0008t0003g0130 a0010c0029t0002g0106 a0012c0103t0001g0030 a0014c0026t0005g0008 a0015c0146t0004g0175 a0017c0062t0004g0226 a0020c0083t0007g0154 a0031c0053t0003g0096 a0041c0041t0002g0038 a0065c0176t0015g0076	24	250	0.0960	-28	c.428 others(45): Show c.428-4449_428-4422delTTTTCTTTCTTTCTTTCTTTCTTTCTTT		LRP2	ENSG00000081479.15	transcript	ENST00000649046.1	protein_coding	4/78						chr2	TogoVar
LRP2_chr2_169122109_169367534	169361330	GTCTCTCT others(21): Show GTCTCTCTCTGTCTCTCTCTGTCTCTCTC	G G	intron_variant intron_variant	MODIFIER	NA18983.hp1 NA18983.hp1	a0004 a0004	a0004c0102 a0004c0102	a0004c0102t0003 a0004c0102t0003	a0004c0102t0003g0017 a0004c0102t0003g0017	1	250	0.0040	-28	c.79+ others(41): Show c.79+963_79+990delGAGAGAGACAGAGAGAGACAGAGAGAGA		LRP2	ENSG00000081479.15	transcript	ENST00000649046.1	protein_coding	1/78						chr2	TogoVar
LRP5_chr11_68307591_68454275	68443561	ATATATAT others(21): Show ATATATATATATATATATATATATATTTT	A A	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02723.hp2 HG03540.hp2 others(1): Show HG01884.hp1 HG02723.hp2 HG03540.hp2 NA21309.hp2	a0001 a0003 a0001 a0003	a0001c0002 a0001c0007 a0003c0012 a0001c0002 a0001c0007 a0003c0012	a0001c0002t0001 a0001c0007t0001 a0003c0012t0001 a0001c0002t0001 a0001c0007t0001 a0003c0012t0001	a0001c0002t0001g0181 a0001c0002t0001g0204 a0001c0007t0001g0015 others(1): Show a0001c0002t0001g0181 a0001c0002t0001g0204 a0001c0007t0001g0015 a0003c0012t0001g0004	4	212	0.0189	-28	c.448 others(47): Show c.4489-2873_4489-2846delATATATATATATATATATATATATTT TT		LRP5	ENSG00000162337.12	transcript	ENST00000294304.12	protein_coding	21/22					INFO_REALIGN_3_PRIME	chr11	TogoVar
LRP6_chr12_12111025_12272044	12119990	AATATATA others(21): Show AATATATATATATATATATATATATATAT	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA20905.hp2 NA20905.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0108 a0002c0002t0108	a0002c0002t0108g0086 a0002c0002t0108g0086	1	262	0.0038	-28	c.11 others(39): Show c.1108_*1135delATATATATATATATATATATATATATAT		LRP6	ENSG00000070018.9	transcript	ENST00000261349.9	protein_coding	23/23				1108		chr12	TogoVar
LRP6_chr12_12111025_12272044	12249671	AGAAGGAA others(21): Show AGAAGGAAGGAAGGAAGGAAGGAAGGAAG	A A	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG02622.hp2 HG02886.hp1 others(1): Show HG01069.hp2 HG02622.hp2 HG02886.hp1 HG04184.hp2	a0001 a0001	a0001c0003 a0001c0005 a0001c0003 a0001c0005	a0001c0003t0061 a0001c0003t0062 a0001c0005t0049 others(1): Show a0001c0003t0061 a0001c0003t0062 a0001c0005t0049 a0001c0005t0056	a0001c0003t0061g0199 a0001c0003t0062g0198 a0001c0005t0049g0017 others(1): Show a0001c0003t0061g0199 a0001c0003t0062g0198 a0001c0005t0049g0017 a0001c0005t0056g0208	4	262	0.0153	-28	c.56- others(43): Show c.56-5044_56-5017delCTTCCTTCCTTCCTTCCTTCCTTCCTTC		LRP6	ENSG00000070018.9	transcript	ENST00000261349.9	protein_coding	1/22						chr12	TogoVar
LRRC20_chr10_70293975_70387625	70299838	TCTTGAGA others(21): Show TCTTGAGATACTGAGCGCTCAGTGATGGC	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA19075.hp1 NA19075.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0037 a0001c0001t0037	a0001c0001t0037g0357 a0001c0001t0037g0357	1	378	0.0027	-28	c.14 others(39): Show c.1488_*1515delGCCATCACTGAGCGCTCAGTATCTCAAG		LRRC20	ENSG00000172731.15	transcript	ENST00000446961.4	protein_coding	5/5				1488		chr10	TogoVar
LRRC28_chr15_99246481_99395729	99247736	TTAGGATG others(21): Show TTAGGATGATGAAAATTTTCTAAATTTTC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03041.hp1 NA20129.hp2 HG03041.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0187 a0001c0001t0213 a0001c0001t0187 a0001c0001t0213	a0001c0001t0187g0212 a0001c0001t0213g0211 a0001c0001t0187g0212 a0001c0001t0213g0211	2	332	0.0060	-28	c.-38 others(39): Show c.-3865_-3838delTAGGATGATGAAAATTTTCTAAATTTTC		LRRC28	ENSG00000168904.15	transcript	ENST00000301981.8	protein_coding					3744		chr15	TogoVar
LRRC38_chr1_13469973_13519003	13481755	TTCTTTCC others(21): Show TTCTTTCCCTCTCTCTCCCTCTCTCCCTC	T T	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG02280.hp2 HG02559.hp1 others(8): Show HG01192.hp1 HG02280.hp2 HG02559.hp1 HG02818.hp2 HG02886.hp1 HG02976.hp2 HG03130.hp2 HG03927.hp2 HG04115.hp2 NA18906.hp2 NA18993.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0002c0003 a0001c0001 a0002c0002 a0002c0003	a0001c0001t0001 a0001c0001t0010 a0002c0002t0001 others(1): Show a0001c0001t0001 a0001c0001t0010 a0002c0002t0001 a0002c0003t0001	a0001c0001t0001g0145 a0001c0001t0001g0148 a0001c0001t0001g0244 others(8): Show a0001c0001t0001g0145 a0001c0001t0001g0148 a0001c0001t0001g0244 a0001c0001t0001g0253 a0001c0001t0001g0320 a0001c0001t0001g0341 a0001c0001t0001g0365 a0001c0001t0001g0379 a0001c0001t0010g0425 a0002c0002t0001g0222 a0002c0003t0001g0136	11	448	0.0246	-28	c.632 others(45): Show c.632-5684_632-5657delGAGGGAGAGAGGGAGAGAGAGGGAAAGA		LRRC38	ENSG00000162494.6	transcript	ENST00000376085.4	protein_coding	1/1						chr1	TogoVar
LRRC38_chr1_13469973_13519003	13481760	TCCCTCTC others(21): Show TCCCTCTCTCTCCCTCTCTCCCTCTCTCC	T T	intron_variant intron_variant	MODIFIER	HG03195.hp2 HG03195.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0350 a0002c0003t0001g0350	1	448	0.0022	-28	c.632 others(45): Show c.632-5689_632-5662delGGAGAGAGGGAGAGAGGGAGAGAGAGGG		LRRC38	ENSG00000162494.6	transcript	ENST00000376085.4	protein_coding	1/1						chr1	TogoVar
LRRC3B_chr3_26617772_26715776	26636908	CTCTTTCT others(21): Show CTCTTTCTCTCTTTCTTTCTTTCTTTCTT	C C	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0290 a0001c0001t0002g0290	1	370	0.0027	-28	c.-16 others(49): Show c.-161+13679_-161+13706delCTCTTTCTTTCTTTCTTTCTTTCT TTCT		LRRC3B	ENSG00000179796.13	transcript	ENST00000396641.7	protein_coding	1/1					INFO_REALIGN_3_PRIME	chr3	TogoVar
LRRC3B_chr3_26617772_26715776	26636916	CTCTTTCT others(21): Show CTCTTTCTTTCTTTCTTTCTTTCTTTCTT	C C	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02723.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0004 a0001c0001t0001g0004	1	370	0.0027	-28	c.-16 others(49): Show c.-161+13711_-161+13738delTTCTTTCTTTCTTTCTTTCTTTCT TTCT		LRRC3B	ENSG00000179796.13	transcript	ENST00000396641.7	protein_coding	1/1					INFO_REALIGN_3_PRIME	chr3	TogoVar
LRRC43_chr12_122178123_122208471	122203645	GGCCCCAA others(21): Show GGCCCCAAACCCGCCCCCGCCAGAACCCC	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02258.hp1 HG02896.hp1 HG02258.hp1 HG02896.hp1	a0001 a0001	a0001c0004 a0001c0022 a0001c0004 a0001c0022	a0001c0004t0001 a0001c0022t0001 a0001c0004t0001 a0001c0022t0001	a0001c0004t0001g0222 a0001c0022t0001g0213 a0001c0004t0001g0222 a0001c0022t0001g0213	2	390	0.0051	-28	c.20 others(37): Show c.204_*231delGCCCCAAACCCGCCCCCGCCAGAACCCC		LRRC43	ENSG00000158113.13	transcript	ENST00000339777.5	protein_coding					175		chr12	TogoVar
LRRC4B_chr19_50511892_50573435	50520220	AAAAAAAA others(21): Show AAAAAAAAAAAAAAAAAAAAAAAAAAAAG	A A	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02886.hp1 HG04115.hp2 HG01891.hp2 HG02886.hp1 HG04115.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0006 a0001c0001t0001 a0001c0001t0006	a0001c0001t0001g0330 a0001c0001t0006g0006 a0001c0001t0006g0268 a0001c0001t0001g0330 a0001c0001t0006g0006 a0001c0001t0006g0268	3	360	0.0083	-28	c.298 others(43): Show c.298-833_298-806delCTTTTTTTTTTTTTTTTTTTTTTTTTTT		LRRC4B	ENSG00000131409.13	transcript	ENST00000652263.1	protein_coding	2/2						chr19	TogoVar
LRRC4B_chr19_50511892_50573435	50520223	AAAAAAAA others(21): Show AAAAAAAAAAAAAAAAAAAAAAAAAGAAG	A A	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG03471.hp1 NA18906.hp1 HG02145.hp1 HG03471.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0003t0001 a0001c0001t0001 a0001c0003t0001	a0001c0001t0001g0215 a0001c0003t0001g0007 a0001c0003t0001g0313 a0001c0001t0001g0215 a0001c0003t0001g0007 a0001c0003t0001g0313	3	360	0.0083	-28	c.298 others(43): Show c.298-836_298-809delCTTCTTTTTTTTTTTTTTTTTTTTTTTT		LRRC4B	ENSG00000131409.13	transcript	ENST00000652263.1	protein_coding	2/2						chr19	TogoVar
LRRC4C_chr11_40109209_41464652	40936014	TTATATAT others(21): Show TTATATATATATATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02896.hp2 HG02572.hp1 HG02896.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0033 a0001c0001t0002g0026 a0001c0001t0001g0033 a0001c0001t0002g0026	2	48	0.0417	-28	c.-49 others(47): Show c.-495-2319_-495-2292delTATATATATATATATATATATATATA TA		LRRC4C	ENSG00000148948.8	transcript	ENST00000528697.6	protein_coding	1/6						chr11	TogoVar
LRRC4C_chr11_40109209_41464652	40987652	TCTCATAT others(21): Show TCTCATATATATGAGATATAAATGATATA	T T	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02717.hp2 HG02922.hp1 others(4): Show HG02622.hp1 HG02717.hp2 HG02922.hp1 HG03225.hp1 HG03225.hp2 NA18989.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0001t0001 a0001c0001t0002 a0001c0002t0001	a0001c0001t0001g0007 a0001c0001t0001g0015 a0001c0001t0002g0034 others(4): Show a0001c0001t0001g0007 a0001c0001t0001g0015 a0001c0001t0002g0034 a0001c0001t0002g0043 a0001c0002t0001g0010 a0001c0002t0001g0011 a0001c0002t0001g0021	7	48	0.1458	-28	c.-49 others(49): Show c.-495-53957_-495-53930delTATATCATTTATATCTCATATATA TGAG		LRRC4C	ENSG00000148948.8	transcript	ENST00000528697.6	protein_coding	1/6						chr11	TogoVar
LRRC4C_chr11_40109209_41464652	41366178	CTAGATAG others(21): Show CTAGATAGATAGATAGATAGACAGATAGA	C C	intron_variant intron_variant	MODIFIER	HG02896.hp1 HG03098.hp1 HG02896.hp1 HG03098.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0002 a0001c0001t0001 a0001c0002t0002	a0001c0001t0001g0003 a0001c0002t0002g0046 a0001c0001t0001g0003 a0001c0002t0002g0046	2	48	0.0417	-28	c.-49 others(49): Show c.-496+93225_-496+93252delTCTATCTGTCTATCTATCTATCTA TCTA		LRRC4C	ENSG00000148948.8	transcript	ENST00000528697.6	protein_coding	1/6						chr11	TogoVar
LRRC53_chr1_74464376_74517611	74500603	CAAAAAAA others(21): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG02293.hp2 HG03834.hp2 others(1): Show HG00099.hp2 HG02293.hp2 HG03834.hp2 NA20805.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0002 a0002c0002t0002g0254 a0002c0002t0002g0002 a0002c0002t0002g0254	4	342	0.0117	-28	c.-27 others(47): Show c.-27+11895_-27+11922delTTTTTTTTTTTTTTTTTTTTTTTTTT TT		LRRC53	ENSG00000162621.7	transcript	ENST00000294635.5	protein_coding	1/4						chr1	TogoVar
LRRC71_chr1_156915632_156938094	156924955	TGACCGAT others(21): Show TGACCGATAAGACCCTGACCACCTTCATC	T T	frameshift_variant frameshift_variant	HIGH	NA19089.hp1 NA19089.hp1	a0011 a0011	a0011c0017 a0011c0017	a0011c0017t0004 a0011c0017t0004	a0011c0017t0004g0289 a0011c0017t0004g0289	1	402	0.0025	-28	c.536 others(35): Show c.536_563delCCGATAAGACCCTGACCACCTTCATCGA	p.Thr others(5): Show p.Thr179fs	LRRC71	ENSG00000160838.14	transcript	ENST00000337428.8	protein_coding	5/15	708/1977	536/1680	179/559		INFO_REALIGN_3_PRIME	chr1	TogoVar
LRRC7_chr1_69562922_70149364	69608846	CTCTCTCT others(21): Show CTCTCTCTCTCTCTCTCTCTCTATATATA	C C	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02559.hp1 NA19000.hp1 HG01884.hp2 HG02559.hp1 NA19000.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0002c0015 a0001c0001 a0001c0003 a0002c0015	a0001c0001t0093 a0001c0003t0020 a0002c0015t0008 a0001c0001t0093 a0001c0003t0020 a0002c0015t0008	a0001c0001t0093g0102 a0001c0003t0020g0005 a0002c0015t0008g0004 a0001c0001t0093g0102 a0001c0003t0020g0005 a0002c0015t0008g0004	3	108	0.0278	-28	c.2+4 others(43): Show c.2+40207_2+40234delCTCTCTCTCTCTCTCTCTCTATATATAT		LRRC7	ENSG00000033122.21	transcript	ENST00000651989.2	protein_coding	1/26					INFO_REALIGN_3_PRIME	chr1	TogoVar
LRRC7_chr1_69562922_70149364	69608848	CTCTCTCT others(21): Show CTCTCTCTCTCTCTCTCTCTATATATATA	C C	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02809.hp2 HG03130.hp1 HG02257.hp2 HG02809.hp2 HG03130.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0015 a0001c0001t0087 a0001c0001t0014 a0001c0001t0015 a0001c0001t0087	a0001c0001t0014g0085 a0001c0001t0015g0086 a0001c0001t0087g0094 a0001c0001t0014g0085 a0001c0001t0015g0086 a0001c0001t0087g0094	3	108	0.0278	-28	c.2+4 others(43): Show c.2+40209_2+40236delCTCTCTCTCTCTCTCTCTATATATATAT		LRRC7	ENSG00000033122.21	transcript	ENST00000651989.2	protein_coding	1/26					INFO_REALIGN_3_PRIME	chr1	TogoVar

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