Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

Sort By

Select column to sort.

Order by

Ascending or descending.

Show

Results per page.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	external
PSMD1_chr2_231051867_231177827	231165024	TTATATAT others(21): Show TTATATATATTTATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00673.hp2 HG04199.hp2 others(5): Show HG00423.hp1 HG00673.hp2 HG04199.hp2 NA18964.hp2 NA18987.hp1 NA19001.hp1 NA19066.hp2 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0225 a0001c0001t0001g0294 a0001c0001t0001g0295 others(5): Show a0001c0001t0001g0225 a0001c0001t0001g0294 a0001c0001t0001g0295 a0001c0001t0001g0305 a0001c0001t0001g0307 a0001c0001t0001g0308 a0001c0001t0001g0319 a0001c0001t0001g0327	8	364	0.0220	-28	c.248 others(45): Show c.2482-166_2482-139delTTATATATATATATATATATATATATAT		PSMD1	ENSG00000173692.14	transcript	ENST00000308696.11	protein_coding	21/24					INFO_REALIGN_3_PRIME	chr2	TogoVar
PTBP2_chr1_96716784_96820049	96746893	CCCTCCCT others(21): Show CCCTCCCTCCCTCCCTCCCTCCCTTCCTT	C C	intron_variant intron_variant	MODIFIER	HG00597.hp1 NA18999.hp1 NA19084.hp1 HG00597.hp1 NA18999.hp1 NA19084.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0228 a0001c0001t0002g0182 a0001c0001t0002g0205 a0001c0001t0001g0228 a0001c0001t0002g0182 a0001c0001t0002g0205	3	364	0.0082	-28	c.40- others(43): Show c.40-4528_40-4501delCCCTCCCTCCCTCCCTCCCTTCCTTCCT		PTBP2	ENSG00000117569.20	transcript	ENST00000674951.1	protein_coding	2/13					INFO_REALIGN_3_PRIME	chr1	TogoVar
PTBP3_chr9_112213435_112338619	112239823	AAGGGAGG others(21): Show AAGGGAGGAAGGGAGGGAGGGAGGGAGGG	A A	intron_variant intron_variant	MODIFIER	HG02080.hp1 HG03098.hp1 HG03195.hp2 others(3): Show HG02080.hp1 HG03098.hp1 HG03195.hp2 NA18973.hp2 NA19006.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0009 a0001c0001t0017 others(1): Show a0001c0001t0003 a0001c0001t0009 a0001c0001t0017 a0001c0001t0025	a0001c0001t0003g0087 a0001c0001t0009g0066 a0001c0001t0009g0067 others(3): Show a0001c0001t0003g0087 a0001c0001t0009g0066 a0001c0001t0009g0067 a0001c0001t0017g0077 a0001c0001t0017g0078 a0001c0001t0025g0313	6	342	0.0175	-28	c.803 others(45): Show c.803-4954_803-4927delCCCTCCCTCCCTCCCTCCCTTCCTCCCT		PTBP3	ENSG00000119314.16	transcript	ENST00000374257.6	protein_coding	7/13						chr9	TogoVar
PTEN_chr10_87858625_87976930	87972369	ATTGTTCC others(21): Show ATTGTTCCTTCTGCCACGCTAAACTTGTT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18971.hp1 NA18971.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0242 a0001c0001t0002g0242	1	322	0.0031	-28	c.68 others(39): Show c.6898_*6925delTTGTTCCTTCTGCCACGCTAAACTTGTT		PTEN	ENSG00000171862.15	transcript	ENST00000371953.8	protein_coding					440		chr10	TogoVar
PTGER3_chr1_70965782_71052816	70981312	CTTCCTTT others(21): Show CTTCCTTTCTTCTTTCTTTCTTTCTTTCT	C C	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG01496.hp2 HG01891.hp1 others(14): Show HG00438.hp1 HG01496.hp2 HG01891.hp1 HG01952.hp2 HG02055.hp1 HG02074.hp2 HG02451.hp2 HG02683.hp2 HG03139.hp2 HG03195.hp2 NA18522.hp1 NA18949.hp1 NA18970.hp1 NA19007.hp1 NA19010.hp2 NA20129.hp2 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0008 a0001c0001t0001 a0001c0001t0002 a0001c0001t0008	a0001c0001t0001g0133 a0001c0001t0001g0140 a0001c0001t0002g0028 others(14): Show a0001c0001t0001g0133 a0001c0001t0001g0140 a0001c0001t0002g0028 a0001c0001t0002g0044 a0001c0001t0002g0056 a0001c0001t0002g0080 a0001c0001t0002g0094 a0001c0001t0002g0104 a0001c0001t0002g0194 a0001c0001t0002g0280 a0001c0001t0002g0295 a0001c0001t0002g0299 a0001c0001t0002g0303 a0001c0001t0002g0304 a0001c0001t0002g0313 a0001c0001t0002g0317 a0001c0001t0008g0142	17	372	0.0457	-28	c.107 others(47): Show c.1078-6952_1078-6925delAGAAAGAAAGAAAGAAAGAAGAAAGG AA		PTGER3	ENSG00000050628.21	transcript	ENST00000306666.10	protein_coding	2/3						chr1	TogoVar
PTGER3_chr1_70965782_71052816	70981316	CTTTCTTC others(21): Show CTTTCTTCTTTCTTTCTTTCTTTCTTTCT	C C	intron_variant intron_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0321 a0001c0001t0001g0321	1	372	0.0027	-28	c.107 others(47): Show c.1078-6956_1078-6929delAGAAAGAAAGAAAGAAAGAAAGAAGA AA		PTGER3	ENSG00000050628.21	transcript	ENST00000306666.10	protein_coding	2/3						chr1	TogoVar
PTGER3_chr1_70965782_71052816	70981376	TTTCTTTC others(21): Show TTTCTTTCTTTCTTTCTTTCCTTCCTTCC	T T	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG02015.hp2 HG02698.hp2 others(3): Show HG00544.hp2 HG02015.hp2 HG02698.hp2 HG02976.hp2 NA19065.hp1 NA19086.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0062 a0001c0001t0001g0221 a0001c0001t0001g0242 others(3): Show a0001c0001t0001g0062 a0001c0001t0001g0221 a0001c0001t0001g0242 a0001c0001t0001g0246 a0001c0001t0001g0286 a0001c0001t0002g0114	6	372	0.0161	-28	c.107 others(47): Show c.1078-7016_1078-6989delGGAAGGAAGGAAAGAAAGAAAGAAAG AA		PTGER3	ENSG00000050628.21	transcript	ENST00000306666.10	protein_coding	2/3						chr1	TogoVar
PTGER3_chr1_70965782_71052816	70981380	TTTCTTTC others(21): Show TTTCTTTCTTTCTTTCCTTCCTTCCTTCC	T T	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02965.hp2 NA19043.hp1 HG02451.hp1 HG02965.hp2 NA19043.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0006 a0001c0002t0001 a0001c0002t0006	a0001c0002t0001g0329 a0001c0002t0001g0330 a0001c0002t0006g0335 a0001c0002t0001g0329 a0001c0002t0001g0330 a0001c0002t0006g0335	3	372	0.0081	-28	c.107 others(47): Show c.1078-7020_1078-6993delGGAAGGAAGGAAGGAAAGAAAGAAAG AA		PTGER3	ENSG00000050628.21	transcript	ENST00000306666.10	protein_coding	2/3						chr1	TogoVar
PTGER4_chr5_40674915_40698735	40697226	AAAAGAAA others(21): Show AAAAGAAAGAAAGAAAGAAAGAAAGAAAG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00673.hp1 HG02027.hp1 HG03017.hp1 others(8): Show HG00673.hp1 HG02027.hp1 HG03017.hp1 HG03490.hp2 HG03492.hp2 HG04115.hp1 HG04228.hp2 NA18941.hp2 NA18947.hp2 NA18954.hp2 NA18983.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0001g0028 others(3): Show a0001c0001t0001g0001 a0001c0001t0001g0008 a0001c0001t0001g0028 a0001c0001t0001g0051 a0001c0001t0001g0064 a0001c0001t0001g0076	11	406	0.0271	-28	c.48 others(39): Show c.4849_*4876delAAAGAAAGAAAGAAAGAAAGAAAGAAAG		PTGER4	ENSG00000171522.6	transcript	ENST00000302472.4	protein_coding					3492		chr5	TogoVar
PTGFRN_chr1_116904916_116995353	116978494	TCCAGCAG others(21): Show TCCAGCAGCACATCAAAAGGCTTATACAC	T T	intron_variant intron_variant	MODIFIER	HG01433.hp2 HG02717.hp2 HG01433.hp2 HG02717.hp2	a0001 a0001	a0001c0008 a0001c0008	a0001c0008t0021 a0001c0008t0021	a0001c0008t0021g0044 a0001c0008t0021g0199 a0001c0008t0021g0044 a0001c0008t0021g0199	2	314	0.0064	-28	c.216 others(47): Show c.2167+4173_2167+4200delCAGCAGCACATCAAAAGGCTTATACA CC		PTGFRN	ENSG00000134247.10	transcript	ENST00000393203.3	protein_coding	7/8					INFO_REALIGN_3_PRIME	chr1	TogoVar
PTGS1_chr9_122366024_122400703	122391347	CTATATAT others(21): Show CTATATATATACATATATATATATACATA	C C	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00438.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0096 a0001c0001t0001g0096	1	332	0.0030	-28	c.144 others(45): Show c.1445-819_1445-792delTACATATATATATATACATATATATATA		PTGS1	ENSG00000095303.17	transcript	ENST00000362012.7	protein_coding	10/10					INFO_REALIGN_3_PRIME	chr9	TogoVar
PTK2B_chr8_27320552_27464386	27350990	AATATATA others(21): Show AATATATATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG02717.hp1 HG00738.hp1 HG02717.hp1	a0001 a0002 a0001 a0002	a0001c0008 a0002c0006 a0001c0008 a0002c0006	a0001c0008t0003 a0002c0006t0001 a0001c0008t0003 a0002c0006t0001	a0001c0008t0003g0114 a0002c0006t0001g0010 a0001c0008t0003g0114 a0002c0006t0001g0010	2	328	0.0061	-28	c.-38 others(47): Show c.-38+25333_-38+25360delTATATATATATATATATATATATATA TA		PTK2B	ENSG00000120899.18	transcript	ENST00000346049.10	protein_coding	1/30					INFO_REALIGN_3_PRIME	chr8	TogoVar
PTK2_chr8_140652900_141006282	140680830	GGGTGCTA others(21): Show GGGTGCTATTTTATATAGAAAAAATGTTT	G G	intron_variant intron_variant	MODIFIER	NA18906.hp1 NA19240.hp1 NA18906.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0001 a0001c0001t0004	a0001c0001t0001g0085 a0001c0001t0004g0095 a0001c0001t0001g0085 a0001c0001t0004g0095	2	290	0.0069	-28	c.268 others(47): Show c.2686-5359_2686-5332delAAACATTTTTTCTATATAAAATAGCA CC		PTK2	ENSG00000169398.20	transcript	ENST00000696786.1	protein_coding	30/35						chr8	TogoVar
PTK7_chr6_43071314_43166715	43118645	CTCTCTCT others(21): Show CTCTCTCTCTCTCTCTATATATATATATA	C C	intron_variant intron_variant	MODIFIER	HG03130.hp1 HG03130.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0243 a0003c0003t0001g0243	1	272	0.0037	-28	c.80- others(45): Show c.80-10330_80-10303delCTCTCTCTCTCTCTATATATATATATAT		PTK7	ENSG00000112655.16	transcript	ENST00000230419.9	protein_coding	1/19					INFO_REALIGN_3_PRIME	chr6	TogoVar
PTK7_chr6_43071314_43166715	43131029	TCACACAC others(21): Show TCACACACACACACACACACACACACACA	T T	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG03516.hp2 NA19043.hp1 HG02258.hp1 HG03516.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0003 a0001c0002t0001 a0001c0001t0001 a0001c0001t0003 a0001c0002t0001	a0001c0001t0001g0204 a0001c0001t0003g0201 a0001c0002t0001g0203 a0001c0001t0001g0204 a0001c0001t0003g0201 a0001c0002t0001g0203	3	272	0.0110	-28	c.812 others(43): Show c.812+390_812+417delACACACACACACACACACACACACACAC		PTK7	ENSG00000112655.16	transcript	ENST00000230419.9	protein_coding	5/19					INFO_REALIGN_3_PRIME	chr6	TogoVar
PTP4A3_chr8_141387021_141437454	141419148	TGGGGTGG others(21): Show TGGGGTGGTTCGGAGCCTCCTCCCTCCCA	T T	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0066 a0001c0001t0001g0066	1	323	0.0031	-28	c.-85 others(47): Show c.-853-2238_-853-2211delGGGTGGTTCGGAGCCTCCTCCCTCCC AG		PTP4A3	ENSG00000184489.13	transcript	ENST00000521578.6	protein_coding	1/5					INFO_REALIGN_3_PRIME	chr8	TogoVar
PTPN11_chr12_112413947_112514918	112424956	TTGTGTGT others(21): Show TTGTGTGTGTGTGTGTGTGTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG01943.hp2 HG02717.hp1 HG02809.hp2 others(1): Show HG01943.hp2 HG02717.hp1 HG02809.hp2 HG02965.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0001 a0001c0001t0004	a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 others(1): Show a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0004g0047	4	300	0.0133	-28	c.14+ others(43): Show c.14+5857_14+5884delGTGTGTGTGTGTGTGTGTGTGTGTGTGT		PTPN11	ENSG00000179295.19	transcript	ENST00000351677.7	protein_coding	1/15					INFO_REALIGN_3_PRIME	chr12	TogoVar
PTPN11_chr12_112413947_112514918	112442830	TTATATAT others(21): Show TTATATATATATATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG00735.hp1 HG01071.hp2 others(76): Show HG00544.hp2 HG00735.hp1 HG01071.hp2 HG01081.hp1 HG01256.hp1 HG01258.hp2 HG01433.hp2 HG01496.hp2 HG01928.hp2 HG01934.hp2 HG01952.hp1 HG01993.hp1 HG02027.hp1 HG02071.hp1 HG02074.hp1 HG02080.hp1 HG02109.hp1 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02148.hp2 HG02165.hp1 HG02257.hp1 HG02273.hp1 HG02717.hp2 HG02809.hp1 HG03017.hp2 HG03041.hp1 HG03225.hp1 NA18906.hp2 NA18941.hp1 NA18942.hp2 NA18943.hp1 NA18945.hp2 NA18946.hp2 NA18947.hp1 NA18950.hp1 NA18951.hp2 NA18952.hp1 NA18954.hp2 NA18955.hp2 NA18959.hp1 NA18960.hp1 NA18961.hp2 NA18964.hp1 NA18968.hp1 NA18969.hp1 NA18971.hp2 NA18973.hp1 NA18980.hp1 NA18982.hp1 NA18984.hp1 NA18986.hp1 NA18987.hp1 NA18994.hp1 NA19000.hp1 NA19002.hp2 NA19004.hp2 NA19009.hp1 NA19011.hp1 NA19012.hp2 NA19057.hp2 NA19058.hp1 NA19062.hp2 NA19067.hp2 NA19068.hp2 NA19070.hp2 NA19074.hp1 NA19076.hp2 NA19079.hp2 NA19081.hp2 NA19082.hp2 NA19084.hp1 NA19085.hp2 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA19091.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0008 a0001c0001t0012 a0001c0001t0019 a0001c0001t0020	a0001c0001t0001g0211 a0001c0001t0001g0250 a0001c0001t0002g0001 others(69): Show a0001c0001t0001g0211 a0001c0001t0001g0250 a0001c0001t0002g0001 a0001c0001t0002g0005 a0001c0001t0002g0040 a0001c0001t0002g0041 a0001c0001t0002g0178 a0001c0001t0002g0209 a0001c0001t0002g0210 a0001c0001t0002g0212 a0001c0001t0002g0213 a0001c0001t0002g0214 a0001c0001t0002g0215 a0001c0001t0002g0217 a0001c0001t0002g0218 a0001c0001t0002g0219 a0001c0001t0002g0220 a0001c0001t0002g0221 a0001c0001t0002g0223 a0001c0001t0002g0224 a0001c0001t0002g0225 a0001c0001t0002g0226 a0001c0001t0002g0227 a0001c0001t0002g0228 a0001c0001t0002g0229 a0001c0001t0002g0230 a0001c0001t0002g0231 a0001c0001t0002g0232 a0001c0001t0002g0233 a0001c0001t0002g0235 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0240 a0001c0001t0002g0241 a0001c0001t0002g0243 a0001c0001t0002g0244 a0001c0001t0002g0245 a0001c0001t0002g0246 a0001c0001t0002g0247 a0001c0001t0002g0248 a0001c0001t0002g0251 a0001c0001t0002g0252 a0001c0001t0002g0253 a0001c0001t0002g0254 a0001c0001t0002g0255 a0001c0001t0002g0257 a0001c0001t0002g0258 a0001c0001t0002g0259 a0001c0001t0002g0260 a0001c0001t0002g0261 a0001c0001t0002g0262 a0001c0001t0002g0266 a0001c0001t0002g0267 a0001c0001t0002g0268 a0001c0001t0002g0269 a0001c0001t0002g0270 a0001c0001t0002g0271 a0001c0001t0002g0272 a0001c0001t0002g0273 a0001c0001t0002g0274 a0001c0001t0002g0281 a0001c0001t0002g0282 a0001c0001t0002g0283 a0001c0001t0002g0284 a0001c0001t0002g0285 a0001c0001t0002g0287 a0001c0001t0002g0290 a0001c0001t0004g0022 a0001c0001t0008g0234 a0001c0001t0012g0222 a0001c0001t0019g0249 a0001c0001t0020g0238	79	300	0.2633	-28	c.15- others(43): Show c.15-3425_15-3398delTATATATATATATATATATATATATATA		PTPN11	ENSG00000179295.19	transcript	ENST00000351677.7	protein_coding	1/15					INFO_REALIGN_3_PRIME	chr12	TogoVar
PTPN12_chr7_77532295_77645069	77641210	ATTTTTTT others(21): Show ATTTTTTTTTTTTTTTTTTTTTTTTTTTT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03942.hp2 HG03942.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0217 a0003c0003t0001g0217	1	310	0.0032	-28	c.19 others(39): Show c.1931_*1958delTTTTTTTTTTTTTTTTTTTTTTTTTTTT		PTPN12	ENSG00000127947.16	transcript	ENST00000248594.11	protein_coding					1142		chr7	TogoVar
PTPN14_chr1_214343700_214556602	214385475	AGATTTCT others(21): Show AGATTTCTACAATCAGGCCCAACCTGATT	A A	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG01109.hp2 HG01496.hp1 others(26): Show HG00738.hp1 HG01109.hp2 HG01496.hp1 HG02055.hp1 HG02109.hp1 HG02145.hp1 HG02280.hp2 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02615.hp2 HG02647.hp1 HG02886.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03130.hp1 HG03139.hp2 HG03195.hp2 HG03516.hp1 HG03540.hp2 HG03654.hp2 HG06807.hp1 NA19043.hp2 NA19084.hp1 NA19240.hp2	a0001 a0003 a0004 a0001 a0003 a0004	a0001c0001 a0001c0002 a0001c0014 others(5): Show a0001c0001 a0001c0002 a0001c0014 a0001c0018 a0001c0023 a0001c0024 a0003c0016 a0004c0004	a0001c0001t0008 a0001c0001t0014 a0001c0001t0019 others(24): Show a0001c0001t0008 a0001c0001t0014 a0001c0001t0019 a0001c0001t0032 a0001c0001t0038 a0001c0001t0047 a0001c0001t0057 a0001c0001t0058 a0001c0001t0090 a0001c0001t0103 a0001c0001t0119 a0001c0001t0120 a0001c0001t0121 a0001c0001t0136 a0001c0001t0150 a0001c0001t0161 a0001c0001t0162 a0001c0001t0163 a0001c0001t0173 a0001c0001t0181 a0001c0002t0012 a0001c0014t0154 a0001c0018t0014 a0001c0023t0169 a0001c0024t0102 a0003c0016t0001 a0004c0004t0175	a0001c0001t0008g0002 a0001c0001t0008g0065 a0001c0001t0008g0069 others(26): Show a0001c0001t0008g0002 a0001c0001t0008g0065 a0001c0001t0008g0069 a0001c0001t0014g0031 a0001c0001t0019g0095 a0001c0001t0032g0061 a0001c0001t0038g0138 a0001c0001t0047g0184 a0001c0001t0057g0028 a0001c0001t0058g0009 a0001c0001t0090g0027 a0001c0001t0103g0089 a0001c0001t0119g0194 a0001c0001t0120g0196 a0001c0001t0121g0199 a0001c0001t0136g0200 a0001c0001t0150g0195 a0001c0001t0161g0259 a0001c0001t0162g0253 a0001c0001t0163g0258 a0001c0001t0173g0257 a0001c0001t0181g0267 a0001c0002t0012g0022 a0001c0014t0154g0198 a0001c0018t0014g0025 a0001c0023t0169g0256 a0001c0024t0102g0078 a0003c0016t0001g0035 a0004c0004t0175g0269	29	272	0.1066	-28	c.106 others(45): Show c.1067-715_1067-688delAATCAGGTTGGGCCTGATTGTAGAAATC		PTPN14	ENSG00000152104.12	transcript	ENST00000366956.10	protein_coding	12/18						chr1	TogoVar
PTPN21_chr14_88460778_88560007	88553511	GGTATAAA others(21): Show GGTATAAAATAATATGCAATAATATGAAA	G G	intron_variant intron_variant	MODIFIER	HG02922.hp2 HG02922.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0006 a0002c0002t0006	a0002c0002t0006g0079 a0002c0002t0006g0079	1	348	0.0029	-28	c.-20 others(47): Show c.-203+1112_-203+1139delTTTCATATTATTGCATATTATTTTAT AC		PTPN21	ENSG00000070778.13	transcript	ENST00000556564.6	protein_coding	1/18						chr14	TogoVar
PTPN22_chr1_113808811_113876712	113850200	AGAAGGAA others(21): Show AGAAGGAAGGAAGGAAGGAAGGAAGGAAG	A A	intron_variant intron_variant	MODIFIER	HG02258.hp2 NA19030.hp1 HG02258.hp2 NA19030.hp1	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0001 a0001c0005t0001	a0001c0005t0001g0276 a0001c0005t0001g0277 a0001c0005t0001g0276 a0001c0005t0001g0277	2	358	0.0056	-28	c.829 others(45): Show c.829-1602_829-1575delCTTCCTTCCTTCCTTCCTTCCTTCCTTC		PTPN22	ENSG00000134242.16	transcript	ENST00000359785.10	protein_coding	10/20						chr1	TogoVar
PTPN23_chr3_47376021_47418435	47413001	CCCTGGAA others(21): Show CCCTGGAATTGCTGGCCTCCTTGACCCCA	C C	frameshift_variant frameshift_variant	HIGH	HG02572.hp2 HG02572.hp2	a0002 a0002	a0002c0032 a0002c0032	a0002c0032t0001 a0002c0032t0001	a0002c0032t0001g0004 a0002c0032t0001g0004	1	332	0.0030	-28	c.472 others(37): Show c.4728_4755delCCTGGAATTGCTGGCCTCCTTGACCCCA	p.Leu others(6): Show p.Leu1577fs	PTPN23	ENSG00000076201.16	transcript	ENST00000265562.5	protein_coding	25/25	4804/5237	4728/4911	1576/1636			chr3	TogoVar
PTPN2_chr18_12787152_12889237	12870293	ATATATGT others(21): Show ATATATGTGTATATATACATATATATGTG	A A	intron_variant intron_variant	MODIFIER	HG03492.hp1 HG03704.hp1 HG03492.hp1 HG03704.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0001 a0001c0001t0004	a0001c0001t0001g0353 a0001c0001t0004g0219 a0001c0001t0001g0353 a0001c0001t0004g0219	2	370	0.0054	-28	c.70- others(45): Show c.70-11067_70-11040delCACATATATATGTATATATACACATATA		PTPN2	ENSG00000175354.20	transcript	ENST00000309660.10	protein_coding	1/8						chr18	TogoVar
PTPN2_chr18_12787152_12889237	12871874	CCTGTCTC others(21): Show CCTGTCTCTACTAAAAATACAACAATTAG	C C	intron_variant intron_variant	MODIFIER	NA18955.hp1 NA18955.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0369 a0001c0001t0001g0369	1	370	0.0027	-28	c.69+ others(45): Show c.69+12171_69+12198delCTAATTGTTGTATTTTTAGTAGAGACAG		PTPN2	ENSG00000175354.20	transcript	ENST00000309660.10	protein_coding	1/8						chr18	TogoVar
PTPN9_chr15_75458251_75584315	75504681	AGGGAGGT others(21): Show AGGGAGGTGGGGGGGTCAGCCCCCCGCCC	A A	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG02615.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0040 a0001c0001t0040	a0001c0001t0040g0285 a0001c0001t0040g0285	1	326	0.0031	-28	c.968 others(43): Show c.968+966_968+993delGGGCGGGGGGCTGACCCCCCCACCTCCC		PTPN9	ENSG00000169410.11	transcript	ENST00000618819.5	protein_coding	7/12						chr15	TogoVar
PTPRA_chr20_2868481_3043669	2909805	TATAATAT others(21): Show TATAATATAAGATAATATATATTAGATAA	T T	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00741.hp1 HG01070.hp2 others(31): Show HG00423.hp2 HG00741.hp1 HG01070.hp2 HG01109.hp2 HG01243.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp2 HG01258.hp1 HG01943.hp2 HG01978.hp1 HG02056.hp1 HG02148.hp2 HG02280.hp1 HG02293.hp2 HG02559.hp2 HG03130.hp2 HG03516.hp2 HG03669.hp2 NA18963.hp1 NA18964.hp2 NA18978.hp2 NA18979.hp1 NA18981.hp1 NA18990.hp1 NA19012.hp1 NA19060.hp1 NA19070.hp1 NA19079.hp1 NA19083.hp2 NA19085.hp2 NA20129.hp2 NA20300.hp2 NA21309.hp1	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0004 a0002c0005 a0005c0018 a0001c0004 a0002c0005 a0005c0018	a0001c0004t0002 a0001c0004t0004 a0002c0005t0001 others(1): Show a0001c0004t0002 a0001c0004t0004 a0002c0005t0001 a0005c0018t0004	a0001c0004t0002g0176 a0001c0004t0002g0177 a0001c0004t0002g0178 others(31): Show a0001c0004t0002g0176 a0001c0004t0002g0177 a0001c0004t0002g0178 a0001c0004t0002g0179 a0001c0004t0002g0180 a0001c0004t0002g0181 a0001c0004t0002g0182 a0001c0004t0002g0183 a0001c0004t0002g0184 a0001c0004t0002g0185 a0001c0004t0002g0186 a0001c0004t0002g0187 a0001c0004t0002g0188 a0001c0004t0002g0189 a0001c0004t0002g0190 a0001c0004t0002g0191 a0001c0004t0002g0192 a0001c0004t0002g0193 a0001c0004t0002g0194 a0001c0004t0002g0196 a0001c0004t0002g0197 a0001c0004t0002g0209 a0001c0004t0004g0171 a0001c0004t0004g0173 a0001c0004t0004g0174 a0001c0004t0004g0175 a0001c0004t0004g0195 a0002c0005t0001g0139 a0002c0005t0001g0140 a0002c0005t0001g0141 a0002c0005t0001g0142 a0002c0005t0001g0143 a0002c0005t0001g0144 a0005c0018t0004g0172	34	356	0.0955	-28	c.-12 others(49): Show c.-128-13401_-128-13374delATAATATAAGATAATATATATTAG ATAA		PTPRA	ENSG00000132670.21	transcript	ENST00000399903.7	protein_coding	1/23						chr20	TogoVar
PTPRD_chr9_8309246_10618002	8373612	GGTGTGTG others(21): Show GGTGTGTGTGTGTGTGTGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG03139.hp2 HG03139.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0025 a0001c0002t0005g0025	1	34	0.0294	-28	c.466 others(47): Show c.4661+2296_4661+2323delACACACACACACACACACACACACAC AC		PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	39/45						chr9	TogoVar
PTPRD_chr9_8309246_10618002	8726588	AATATATA others(21): Show AATATATATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01981.hp1 HG02559.hp1 HG01981.hp1 HG02559.hp1	a0001 a0003 a0001 a0003	a0001c0011 a0003c0008 a0001c0011 a0003c0008	a0001c0011t0005 a0003c0008t0008 a0001c0011t0005 a0003c0008t0008	a0001c0011t0005g0021 a0003c0008t0008g0003 a0001c0011t0005g0021 a0003c0008t0008g0003	2	34	0.0588	-28	c.64+ others(43): Show c.64+7164_64+7191delATATATATATATATATATATATATATAT		PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	12/45						chr9	TogoVar
PTPRD_chr9_8309246_10618002	8934466	TATATATA others(21): Show TATATATATATAAATATATATATATATAA	T T	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01981.hp1 HG01109.hp2 HG01981.hp1	a0001 a0003 a0001 a0003	a0001c0002 a0003c0008 a0001c0002 a0003c0008	a0001c0002t0003 a0003c0008t0008 a0001c0002t0003 a0003c0008t0008	a0001c0002t0003g0024 a0003c0008t0008g0003 a0001c0002t0003g0024 a0003c0008t0008g0003	2	34	0.0588	-28	c.-10 others(49): Show c.-104+84203_-104+84230delTTATATATATATATATTTATATAT ATAT		PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	11/45						chr9	TogoVar
PTPRD_chr9_8309246_10618002	9019311	AGAAAGAA others(21): Show AGAAAGAAAGAAAGAAAGAAAGAAAGAAC	A A	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02559.hp1	a0001 a0001	a0001c0011 a0001c0011	a0001c0011t0005 a0001c0011t0005	a0001c0011t0005g0021 a0001c0011t0005g0021	1	34	0.0294	-28	c.-14 others(45): Show c.-142-604_-142-577delGTTCTTTCTTTCTTTCTTTCTTTCTTTC		PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	10/45						chr9	TogoVar
PTPRD_chr9_8309246_10618002	9286873	AATATATA others(21): Show AATATATATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG02622.hp1 HG03225.hp1 HG00642.hp2 HG02622.hp1 HG03225.hp1	a0001 a0005 a0001 a0005	a0001c0001 a0001c0017 a0005c0015 a0001c0001 a0001c0017 a0005c0015	a0001c0001t0013 a0001c0017t0002 a0005c0015t0010 a0001c0001t0013 a0001c0017t0002 a0005c0015t0010	a0001c0001t0013g0022 a0001c0017t0002g0005 a0005c0015t0010g0026 a0001c0001t0013g0022 a0001c0017t0002g0005 a0005c0015t0010g0026	3	34	0.0882	-28	c.-20 others(51): Show c.-202-103538_-202-103511delATATATATATATATATATATAT ATATAT		PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	9/45						chr9	TogoVar
PTPRD_chr9_8309246_10618002	10194333	TATATATA others(21): Show TATATATATATATAGAGAGAGAGAGAGAG	T T	intron_variant intron_variant	MODIFIER	HG01099.hp2 HG01099.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0013 a0001c0001t0002g0013	1	34	0.0294	-28	c.-54 others(51): Show c.-545+146602_-545+146629delCTCTCTCTCTCTCTCTATATAT ATATAT		PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	3/45						chr9	TogoVar
PTPRD_chr9_8309246_10618002	10194337	TATATATA others(21): Show TATATATATAGAGAGAGAGAGAGAGAGAG	T T	intron_variant intron_variant	MODIFIER	HG02683.hp2 HG02683.hp2	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0026 a0001c0006t0026	a0001c0006t0026g0034 a0001c0006t0026g0034	1	34	0.0294	-28	c.-54 others(51): Show c.-545+146598_-545+146625delCTCTCTCTCTCTCTCTCTCTAT ATATAT		PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	3/45						chr9	TogoVar
PTPRD_chr9_8309246_10618002	10194341	TATATAGA others(21): Show TATATAGAGAGAGAGAGAGAGAGAGAGAG	T T	intron_variant intron_variant	MODIFIER	HG03834.hp1 HG03834.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0006 a0001c0001t0001g0006	1	34	0.0294	-28	c.-54 others(51): Show c.-545+146594_-545+146621delCTCTCTCTCTCTCTCTCTCTCT CTATAT		PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	3/45						chr9	TogoVar
PTPRG_chr3_61556571_62302609	61589749	TCGGGTGG others(21): Show TCGGGTGGATGGATGAGTGGATGGGTAGA	T T	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02922.hp1 HG02258.hp2 HG02922.hp1	a0003 a0006 a0003 a0006	a0003c0004 a0006c0007 a0003c0004 a0006c0007	a0003c0004t0001 a0006c0007t0004 a0003c0004t0001 a0006c0007t0004	a0003c0004t0001g0002 a0006c0007t0004g0060 a0003c0004t0001g0002 a0006c0007t0004g0060	2	94	0.0213	-28	c.85+ others(45): Show c.85+27378_85+27405delCGGGTGGATGGATGAGTGGATGGGTAGA		PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	1/29						chr3	TogoVar
PTPRG_chr3_61556571_62302609	61732709	AAAATAAA others(21): Show AAAATAAATAAATAAATAAATAAATAAAT	A A	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00738.hp1 HG01496.hp1 others(19): Show HG00639.hp1 HG00738.hp1 HG01496.hp1 HG02027.hp1 HG02109.hp2 HG02145.hp2 HG02559.hp2 HG02809.hp1 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG03139.hp1 HG03139.hp2 HG03471.hp1 HG03540.hp1 HG03831.hp2 HG04199.hp1 NA18522.hp2 NA18998.hp2 NA19030.hp2 NA19087.hp2 NA19240.hp2	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0005 a0006	a0001c0001 a0001c0005 a0001c0008 others(9): Show a0001c0001 a0001c0005 a0001c0008 a0001c0014 a0001c0015 a0001c0019 a0002c0002 a0002c0003 a0003c0004 a0004c0006 a0005c0011 a0006c0007	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(14): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0005t0009 a0001c0008t0005 a0001c0014t0015 a0001c0015t0001 a0001c0019t0001 a0002c0002t0001 a0002c0002t0002 a0002c0003t0002 a0002c0003t0008 a0003c0004t0001 a0004c0006t0002 a0005c0011t0002 a0006c0007t0004	a0001c0001t0001g0045 a0001c0001t0002g0010 a0001c0001t0002g0050 others(19): Show a0001c0001t0001g0045 a0001c0001t0002g0010 a0001c0001t0002g0050 a0001c0001t0002g0089 a0001c0001t0003g0012 a0001c0001t0004g0026 a0001c0005t0009g0022 a0001c0008t0005g0030 a0001c0008t0005g0068 a0001c0014t0015g0005 a0001c0015t0001g0011 a0001c0019t0001g0069 a0002c0002t0001g0064 a0002c0002t0002g0021 a0002c0003t0002g0052 a0002c0003t0002g0075 a0002c0003t0008g0016 a0003c0004t0001g0070 a0004c0006t0002g0081 a0004c0006t0002g0088 a0005c0011t0002g0080 a0006c0007t0004g0031	22	94	0.2340	-28	c.86- others(45): Show c.86-16144_86-16117delAAATAAATAAATAAATAAATAAATAAAT		PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	1/29					INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	61792668	TTTTCTTT others(21): Show TTTTCTTTCTTTCTTTCTTTCTTTCTTTC	T T	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00280.hp1 HG00639.hp1 others(17): Show HG00099.hp1 HG00280.hp1 HG00639.hp1 HG00738.hp2 HG01169.hp2 HG01243.hp2 HG01496.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02258.hp2 HG02922.hp1 HG02922.hp2 HG02970.hp2 HG03130.hp1 HG03139.hp2 HG03225.hp2 HG03540.hp1 HG03831.hp2 NA21309.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0006	a0001c0001 a0001c0014 a0001c0019 others(5): Show a0001c0001 a0001c0014 a0001c0019 a0002c0002 a0002c0003 a0003c0004 a0003c0013 a0006c0007	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(9): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0007 a0001c0014t0015 a0001c0019t0001 a0002c0002t0002 a0002c0003t0002 a0002c0003t0008 a0003c0004t0001 a0003c0013t0001 a0006c0007t0004	a0001c0001t0001g0001 a0001c0001t0001g0009 a0001c0001t0001g0033 others(17): Show a0001c0001t0001g0001 a0001c0001t0001g0009 a0001c0001t0001g0033 a0001c0001t0001g0044 a0001c0001t0001g0053 a0001c0001t0001g0055 a0001c0001t0001g0072 a0001c0001t0001g0082 a0001c0001t0002g0050 a0001c0001t0002g0093 a0001c0001t0004g0028 a0001c0001t0007g0084 a0001c0014t0015g0005 a0001c0019t0001g0069 a0002c0002t0002g0020 a0002c0003t0002g0075 a0002c0003t0008g0016 a0003c0004t0001g0002 a0003c0013t0001g0004 a0006c0007t0004g0060	20	94	0.2128	-28	c.190 others(47): Show c.190+43738_190+43765delCTTTCTTTCTTTCTTTCTTTCTTTCT TT		PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	2/29					INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	61803469	ACAACATG others(21): Show ACAACATGGTTCATGTTGTCCATGTTGTC	A A	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG02647.hp2 HG02683.hp2 others(6): Show HG01099.hp1 HG02647.hp2 HG02683.hp2 HG02723.hp2 HG03098.hp2 HG03130.hp1 HG03540.hp1 NA19240.hp2 NA21309.hp2	a0001 a0003 a0006 a0001 a0003 a0006	a0001c0001 a0001c0005 a0001c0016 others(3): Show a0001c0001 a0001c0005 a0001c0016 a0001c0019 a0003c0004 a0006c0007	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0005t0001 a0001c0016t0001 a0001c0019t0001 a0003c0004t0003 a0006c0007t0004	a0001c0001t0001g0033 a0001c0001t0002g0093 a0001c0001t0003g0023 others(6): Show a0001c0001t0001g0033 a0001c0001t0002g0093 a0001c0001t0003g0023 a0001c0001t0005g0025 a0001c0005t0001g0014 a0001c0016t0001g0059 a0001c0019t0001g0069 a0003c0004t0003g0008 a0006c0007t0004g0031	9	94	0.0957	-28	c.190 others(47): Show c.190+54496_190+54523delTTCATGTTGTCCATGTTGTCCAACAT GG		PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	2/29					INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	61887119	CATGCATA others(21): Show CATGCATATATATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG02976.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	1	94	0.0106	-28	c.191 others(49): Show c.191-102503_191-102476delGCATATATATATATATATATATAT ATAT		PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	2/29					INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	61887123	CATATATA others(21): Show CATATATATATATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG02698.hp1 HG03017.hp2 HG02698.hp1 HG03017.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0002 a0002c0003t0001 a0001c0001t0002 a0002c0003t0001	a0001c0001t0002g0047 a0002c0003t0001g0017 a0001c0001t0002g0047 a0002c0003t0001g0017	2	94	0.0213	-28	c.191 others(49): Show c.191-102481_191-102454delATATATATATATATATATATATAT ATAT		PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	2/29					INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	62092063	GACACACA others(21): Show GACACACACACACACACACACACACACAC	G G	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00735.hp2 HG01169.hp1 others(5): Show HG00280.hp2 HG00735.hp2 HG01169.hp1 HG01243.hp1 HG02109.hp2 HG02683.hp1 HG02809.hp1 HG03471.hp2	a0001 a0002 a0004 others(1): Show a0001 a0002 a0004 a0005	a0001c0001 a0001c0008 a0002c0002 others(2): Show a0001c0001 a0001c0008 a0002c0002 a0004c0006 a0005c0010	a0001c0001t0001 a0001c0001t0004 a0001c0008t0005 others(4): Show a0001c0001t0001 a0001c0001t0004 a0001c0008t0005 a0002c0002t0002 a0002c0002t0011 a0004c0006t0002 a0005c0010t0002	a0001c0001t0001g0057 a0001c0001t0004g0026 a0001c0008t0005g0068 others(5): Show a0001c0001t0001g0057 a0001c0001t0004g0026 a0001c0008t0005g0068 a0002c0002t0002g0051 a0002c0002t0002g0092 a0002c0002t0011g0056 a0004c0006t0002g0094 a0005c0010t0002g0058	8	94	0.0851	-28	c.615 others(47): Show c.615+13845_615+13872delCACACACACACACACACACACACACA CA		PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	5/29					INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRK_chr6_127963785_128525599	128435094	AAGGAAGG others(21): Show AAGGAAGGAAGGAAGGCAGGAAGGCAGGC	A A	intron_variant intron_variant	MODIFIER	HG01175.hp1 HG03209.hp2 NA18906.hp1 HG01175.hp1 HG03209.hp2 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0003t0002 a0001c0001t0001 a0001c0003t0002	a0001c0001t0001g0016 a0001c0001t0001g0046 a0001c0003t0002g0032 a0001c0001t0001g0016 a0001c0001t0001g0046 a0001c0003t0002g0032	3	53	0.0566	-28	c.101 others(47): Show c.101-37434_101-37407delGCCTGCCTTCCTGCCTTCCTTCCTTC CT		PTPRK	ENSG00000152894.15	transcript	ENST00000368226.9	protein_coding	1/29						chr6	TogoVar
PTPRM_chr18_7562316_8411856	8125976	CATATATA others(21): Show CATATATATATATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG02572.hp1 NA19043.hp2 HG00639.hp2 HG02572.hp1 NA19043.hp2	a0001 a0002 a0001 a0002	a0001c0006 a0002c0011 a0001c0006 a0002c0011	a0001c0006t0002 a0001c0006t0004 a0002c0011t0002 a0001c0006t0002 a0001c0006t0004 a0002c0011t0002	a0001c0006t0002g0012 a0001c0006t0004g0070 a0002c0011t0002g0029 a0001c0006t0002g0012 a0001c0006t0004g0070 a0002c0011t0002g0029	3	80	0.0375	-28	c.216 others(49): Show c.2167+11174_2167+11201delATATATATATATATATATATATAT ATAT		PTPRM	ENSG00000173482.17	transcript	ENST00000580170.6	protein_coding	13/32					INFO_REALIGN_3_PRIME	chr18	TogoVar
PTPRM_chr18_7562316_8411856	8240635	GAGAGAGA others(21): Show GAGAGAGAGAGAGAGAGAGAAAGAAAGAA	G G	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG01891.hp1 HG02145.hp1 others(5): Show HG00741.hp2 HG01891.hp1 HG02145.hp1 HG02280.hp2 HG02572.hp1 HG02896.hp1 HG03540.hp1 HG03540.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0016 others(2): Show a0001c0001 a0001c0002 a0001c0016 a0001c0020 a0002c0011	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 others(4): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0002t0001 a0001c0016t0001 a0001c0020t0001 a0002c0011t0002	a0001c0001t0001g0007 a0001c0001t0004g0069 a0001c0001t0005g0036 others(5): Show a0001c0001t0001g0007 a0001c0001t0004g0069 a0001c0001t0005g0036 a0001c0002t0001g0046 a0001c0002t0001g0065 a0001c0016t0001g0057 a0001c0020t0001g0061 a0002c0011t0002g0029	8	80	0.1000	-28	c.230 others(47): Show c.2301-3419_2301-3392delGAGAGAGAGAGAGAGAAAGAAAGAAA GA		PTPRM	ENSG00000173482.17	transcript	ENST00000580170.6	protein_coding	14/32					INFO_REALIGN_3_PRIME	chr18	TogoVar
PTPRM_chr18_7562316_8411856	8240800	GAGAGAGA others(21): Show GAGAGAGAGAGAGAGAGAGAGAGAGAGAA	G G	intron_variant intron_variant	MODIFIER	HG01515.hp1 HG01515.hp2 HG01928.hp1 others(4): Show HG01515.hp1 HG01515.hp2 HG01928.hp1 HG02040.hp2 HG02559.hp1 HG02559.hp2 HG03130.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(2): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005	a0001c0001t0001 a0001c0001t0002 a0001c0002t0002 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0002t0002 a0001c0003t0001 a0001c0004t0001 a0001c0005t0003	a0001c0001t0001g0001 a0001c0001t0001g0045 a0001c0001t0002g0027 others(4): Show a0001c0001t0001g0001 a0001c0001t0001g0045 a0001c0001t0002g0027 a0001c0002t0002g0032 a0001c0003t0001g0019 a0001c0004t0001g0049 a0001c0005t0003g0074	7	80	0.0875	-28	c.230 others(47): Show c.2301-3254_2301-3227delGAGAGAGAGAGAGAGAGAGAGAGAAA GA		PTPRM	ENSG00000173482.17	transcript	ENST00000580170.6	protein_coding	14/32					INFO_REALIGN_3_PRIME	chr18	TogoVar
PTPRM_chr18_7562316_8411856	8240804	GAGAGAGA others(21): Show GAGAGAGAGAGAGAGAGAGAGAGAAAGAA	G G	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG02622.hp2 HG02723.hp1 others(6): Show HG00639.hp2 HG02622.hp2 HG02723.hp1 HG02809.hp1 HG02896.hp2 HG03471.hp2 HG03486.hp1 NA19043.hp1 NA19043.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0004 others(3): Show a0001c0001 a0001c0002 a0001c0004 a0001c0006 a0002c0009 a0002c0010	a0001c0001t0001 a0001c0002t0002 a0001c0004t0001 others(5): Show a0001c0001t0001 a0001c0002t0002 a0001c0004t0001 a0001c0004t0002 a0001c0006t0002 a0001c0006t0004 a0002c0009t0001 a0002c0010t0001	a0001c0001t0001g0059 a0001c0002t0002g0013 a0001c0004t0001g0016 others(6): Show a0001c0001t0001g0059 a0001c0002t0002g0013 a0001c0004t0001g0016 a0001c0004t0001g0066 a0001c0004t0002g0028 a0001c0006t0002g0012 a0001c0006t0004g0070 a0002c0009t0001g0067 a0002c0010t0001g0047	9	80	0.1125	-28	c.230 others(47): Show c.2301-3250_2301-3223delGAGAGAGAGAGAGAGAGAGAAAGAAA GA		PTPRM	ENSG00000173482.17	transcript	ENST00000580170.6	protein_coding	14/32					INFO_REALIGN_3_PRIME	chr18	TogoVar
PTPRT_chr20_42067756_43194906	42278073	CTATATAT others(21): Show CTATATATATATATATATATATATATATA	C C	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02647.hp1 HG02976.hp2 others(1): Show HG02109.hp1 HG02647.hp1 HG02976.hp2 HG03471.hp2	a0001 a0006 a0001 a0006	a0001c0003 a0001c0022 a0001c0029 others(1): Show a0001c0003 a0001c0022 a0001c0029 a0006c0019	a0001c0003t0020 a0001c0022t0021 a0001c0029t0013 others(1): Show a0001c0003t0020 a0001c0022t0021 a0001c0029t0013 a0006c0019t0008	a0001c0003t0020g0047 a0001c0022t0021g0045 a0001c0029t0013g0057 others(1): Show a0001c0003t0020g0047 a0001c0022t0021g0045 a0001c0029t0013g0057 a0006c0019t0008g0050	4	62	0.0645	-28	c.217 others(47): Show c.2176+4388_2176+4415delTATATATATATATATATATATATATA TA		PTPRT	ENSG00000196090.14	transcript	ENST00000373187.6	protein_coding	13/30						chr20	TogoVar
PTPRT_chr20_42067756_43194906	42956408	TTGCTCCT others(21): Show TTGCTCCTACTCTAGCCGTGTGAGACACC	T T	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG01243.hp2 HG01261.hp2 others(6): Show HG00741.hp2 HG01243.hp2 HG01261.hp2 HG02622.hp1 HG02809.hp2 HG02896.hp2 HG02897.hp1 HG02922.hp2 HG03471.hp1	a0001 a0002 a0005 others(1): Show a0001 a0002 a0005 a0007	a0001c0002 a0001c0003 a0001c0031 others(5): Show a0001c0002 a0001c0003 a0001c0031 a0002c0001 a0002c0004 a0002c0014 a0005c0028 a0007c0010	a0001c0002t0022 a0001c0003t0002 a0001c0031t0001 others(5): Show a0001c0002t0022 a0001c0003t0002 a0001c0031t0001 a0002c0001t0011 a0002c0004t0002 a0002c0014t0007 a0005c0028t0027 a0007c0010t0009	a0001c0002t0022g0055 a0001c0003t0002g0043 a0001c0031t0001g0056 others(6): Show a0001c0002t0022g0055 a0001c0003t0002g0043 a0001c0031t0001g0056 a0002c0001t0011g0019 a0002c0001t0011g0020 a0002c0004t0002g0005 a0002c0014t0007g0004 a0005c0028t0027g0042 a0007c0010t0009g0021	9	62	0.1452	-28	c.89- others(45): Show c.89-70504_89-70477delGGTGTCTCACACGGCTAGAGTAGGAGCA		PTPRT	ENSG00000196090.14	transcript	ENST00000373187.6	protein_coding	1/30						chr20	TogoVar
PTPRZ1_chr7_121868161_122067036	122000646	CATATATA others(21): Show CATATATATATATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02572.hp2	a0004 a0004	a0004c0008 a0004c0008	a0004c0008t0003 a0004c0008t0003	a0004c0008t0003g0205 a0004c0008t0003g0205	1	312	0.0032	-28	c.124 others(47): Show c.1240+2669_1240+2696delATATATATATATATATATATATATAT AT		PTPRZ1	ENSG00000106278.12	transcript	ENST00000393386.7	protein_coding	10/29					INFO_REALIGN_3_PRIME	chr7	TogoVar

Search by Variant

Search

Search Results (Total: 7045 hits)