Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
LIPI_chr21_14103813_14215955	14106195	AAAAAAAA others(22): Show AAAAAAAAAAATATATATATATATATATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00639.hp1 HG00735.hp1 HG03654.hp1 HG00639.hp1 HG00735.hp1 HG03654.hp1	a0001 a0005 a0001 a0005	a0001c0001 a0005c0004 a0001c0001 a0005c0004	a0001c0001t0001 a0005c0004t0002 a0001c0001t0001 a0005c0004t0002	a0001c0001t0001g0061 a0001c0001t0001g0210 a0005c0004t0002g0223 a0001c0001t0001g0061 a0001c0001t0001g0210 a0005c0004t0002g0223	3	346	0.0087	-29	c.27 others(40): Show c.2769_*2797delATATATATATATATATATATTTTTTTTTT	LIPI	ENSG00000188992.12	transcript	ENST00000681601.1	protein_coding		2617		chr21	TogoVar
LIPI_chr21_14103813_14215955	14106197	AAAAAAAA others(22): Show AAAAAAAAATATATATATATATATATATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01256.hp1 HG02129.hp1 HG02922.hp2 others(1): Show HG01256.hp1 HG02129.hp1 HG02922.hp2 HG06807.hp1	a0001 a0005 a0001 a0005	a0001c0001 a0005c0004 a0001c0001 a0005c0004	a0001c0001t0001 a0001c0001t0008 a0005c0004t0002 a0001c0001t0001 a0001c0001t0008 a0005c0004t0002	a0001c0001t0001g0078 a0001c0001t0008g0025 a0005c0004t0002g0226 others(1): Show a0001c0001t0001g0078 a0001c0001t0008g0025 a0005c0004t0002g0226 a0005c0004t0002g0229	4	331	0.0121	-29	c.27 others(40): Show c.2767_*2795delATATATATATATATATATATATTTTTTTT	LIPI	ENSG00000188992.12	transcript	ENST00000681601.1	protein_coding		2615		chr21	TogoVar
LIPI_chr21_14103813_14215955	14161618	ATATAATA others(22): Show ATATAATATATTAATATATAATATATACAT	A A	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00621.hp2 HG01243.hp1 others(16): Show HG00280.hp1 HG00621.hp2 HG01243.hp1 HG01884.hp1 HG02015.hp2 HG02109.hp2 HG02572.hp2 HG02647.hp1 HG02886.hp1 HG02886.hp2 HG03098.hp1 HG03209.hp2 HG03453.hp2 HG03486.hp2 NA18747.hp2 NA18986.hp1 NA19004.hp1 NA19006.hp2 NA19240.hp1	a0001 a0002 a0003 others(6): Show a0001 a0002 a0003 a0005 a0006 a0008 a0009 a0013 a0014	a0001c0008 a0002c0002 a0002c0007 others(7): Show a0001c0008 a0002c0002 a0002c0007 a0003c0005 a0005c0004 a0006c0012 a0008c0010 a0009c0013 a0013c0023 a0014c0022	a0001c0008t0001 a0002c0002t0002 a0002c0007t0002 others(8): Show a0001c0008t0001 a0002c0002t0002 a0002c0007t0002 a0003c0005t0002 a0005c0004t0002 a0005c0004t0009 a0006c0012t0001 a0008c0010t0002 a0009c0013t0002 a0013c0023t0001 a0014c0022t0002	a0001c0008t0001g0270 a0001c0008t0001g0292 a0002c0002t0002g0248 others(16): Show a0001c0008t0001g0270 a0001c0008t0001g0292 a0002c0002t0002g0248 a0002c0007t0002g0252 a0002c0007t0002g0253 a0003c0005t0002g0272 a0003c0005t0002g0278 a0003c0005t0002g0288 a0003c0005t0002g0290 a0005c0004t0002g0200 a0005c0004t0009g0027 a0006c0012t0001g0283 a0008c0010t0002g0029 a0008c0010t0002g0031 a0008c0010t0002g0033 a0009c0013t0002g0032 a0009c0013t0002g0034 a0013c0023t0001g0036 a0014c0022t0002g0028	19	360	0.0528	-29	c.100 others(48): Show c.1006+1772_1006+1800delATGTATATATTATATATTAATATATT ATA	LIPI	ENSG00000188992.12	transcript	ENST00000681601.1	protein_coding	7/9			chr21	TogoVar
LIPT1_chr2_99149967_99168137	99161268	AAAAAAAA others(22): Show AAAAAAAAAAAAAAAAAAAAAAAAATATAT	A A	intron_variant intron_variant	MODIFIER	HG02132.hp1 HG02132.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0082 a0001c0001t0001g0082	1	404	0.0025	-29	c.-1- others(42): Show c.-1-687_-1-659delAAAAAAAAAAAAAAAAAAAAAAATATATA	LIPT1	ENSG00000144182.17	transcript	ENST00000651691.1	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr2	TogoVar
LIPT1_chr2_99149967_99168137	99161272	AAAAAAAA others(22): Show AAAAAAAAAAAAAAAAAAAAATATATATAT	A A	intron_variant intron_variant	MODIFIER	NA19091.hp1 NA19091.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0005 a0001c0001t0001g0005	1	391	0.0026	-29	c.-1- others(42): Show c.-1-683_-1-655delAAAAAAAAAAAAAAAAAAATATATATATA	LIPT1	ENSG00000144182.17	transcript	ENST00000651691.1	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr2	TogoVar
LIPT1_chr2_99149967_99168137	99161276	AAAAAAAA others(22): Show AAAAAAAAAAAAAAAAATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00639.hp1 NA18990.hp1 HG00639.hp1 NA18990.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0002 a0001c0003t0001g0002	2	400	0.0050	-29	c.-1- others(42): Show c.-1-679_-1-651delAAAAAAAAAAAAAAATATATATATATATA	LIPT1	ENSG00000144182.17	transcript	ENST00000651691.1	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr2	TogoVar
LIPT1_chr2_99149967_99168137	99161278	AAAAAAAA others(22): Show AAAAAAAAAAAAAAATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01169.hp2 HG01993.hp2 HG02293.hp2 others(4): Show HG01169.hp2 HG01993.hp2 HG02293.hp2 NA18957.hp1 NA19002.hp2 NA19054.hp1 NA19084.hp1	a0001 a0001	a0001c0002 a0001c0003 a0001c0002 a0001c0003	a0001c0002t0001 a0001c0003t0001 a0001c0002t0001 a0001c0003t0001	a0001c0002t0001g0048 a0001c0003t0001g0002 a0001c0003t0001g0104 a0001c0002t0001g0048 a0001c0003t0001g0002 a0001c0003t0001g0104	7	378	0.0185	-29	c.-1- others(42): Show c.-1-677_-1-649delAAAAAAAAAAAAATATATATATATATATA	LIPT1	ENSG00000144182.17	transcript	ENST00000651691.1	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr2	TogoVar
LIPT1_chr2_99149967_99168137	99161280	AAAAAAAA others(22): Show AAAAAAAAAAAAATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG01071.hp2 HG01952.hp2 others(4): Show HG00140.hp2 HG01071.hp2 HG01952.hp2 HG02273.hp1 NA18952.hp2 NA19056.hp1 NA19079.hp1	a0001 a0001	a0001c0002 a0001c0003 a0001c0002 a0001c0003	a0001c0002t0001 a0001c0003t0001 a0001c0002t0001 a0001c0003t0001	a0001c0002t0001g0020 a0001c0003t0001g0002 a0001c0003t0001g0010 a0001c0002t0001g0020 a0001c0003t0001g0002 a0001c0003t0001g0010	7	392	0.0179	-29	c.-1- others(42): Show c.-1-675_-1-647delAAAAAAAAAAATATATATATATATATATA	LIPT1	ENSG00000144182.17	transcript	ENST00000651691.1	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr2	TogoVar
LIPT1_chr2_99149967_99168137	99161282	AAAAAAAA others(22): Show AAAAAAAAAAATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01433.hp2 HG01496.hp1 HG01433.hp2 HG01496.hp1	a0001 a0001	a0001c0002 a0001c0003 a0001c0002 a0001c0003	a0001c0002t0001 a0001c0003t0001 a0001c0002t0001 a0001c0003t0001	a0001c0002t0001g0020 a0001c0003t0001g0010 a0001c0002t0001g0020 a0001c0003t0001g0010	2	402	0.0050	-29	c.-1- others(42): Show c.-1-673_-1-645delAAAAAAAAATATATATATATATATATATA	LIPT1	ENSG00000144182.17	transcript	ENST00000651691.1	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr2	TogoVar
LOC101059948_chr19_49012968_49025549	49015868	CCTGTTTT others(22): Show CCTGTTTTCCACCAGAGTTCTGACACTGTG	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18991.hp2 NA18991.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0027 a0001c0001t0001g0027	1	400	0.0025	-29	c.20 others(40): Show c.2071_*2099delCACAGTGTCAGAACTCTGGTGGAAAACAG	LOC101059948	ENSG00000268655.3	transcript	ENST00000637680.2	protein_coding		2099		chr19	TogoVar
LPP_chr3_188149157_188895671	188785462	TATATATT others(22): Show TATATATTCCATCATATATATATATTCATC	T T	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG01358.hp1 HG02074.hp1 HG00438.hp2 HG01358.hp1 HG02074.hp1	a0001 a0001	a0001c0002 a0001c0005 a0001c0002 a0001c0005	a0001c0002t0049 a0001c0002t0057 a0001c0005t0035 a0001c0002t0049 a0001c0002t0057 a0001c0005t0035	a0001c0002t0049g0040 a0001c0002t0057g0013 a0001c0005t0035g0075 a0001c0002t0049g0040 a0001c0002t0057g0013 a0001c0005t0035g0075	3	74	0.0405	-29	c.141 others(50): Show c.1410+25187_1410+25215delTCCATCATATATATATATTCATCA TATAT	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	9/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LRBA_chr4_150259435_151020284	150420420	TATATATA others(22): Show TATATATAAAGTATATATAATACATATATA	T T	intron_variant intron_variant	MODIFIER	HG02109.hp1 NA18994.hp2 NA19079.hp2 HG02109.hp1 NA18994.hp2 NA19079.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0001c0005 a0003c0004 a0001c0001 a0001c0005 a0003c0004	a0001c0001t0002 a0001c0005t0002 a0003c0004t0001 a0001c0001t0002 a0001c0005t0002 a0003c0004t0001	a0001c0001t0002g0153 a0001c0005t0002g0163 a0003c0004t0001g0157 a0001c0001t0002g0153 a0001c0005t0002g0163 a0003c0004t0001g0157	3	177	0.0169	-29	c.704 others(48): Show c.7042-4859_7042-4831delTATATATGTATTATATATACTTTATA TAT	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	46/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150658018	TGTGTAAT others(22): Show TGTGTAATTACACTGCCTGAGATTGTAACA	T T	intron_variant intron_variant	MODIFIER	HG02129.hp2 HG02129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0076 a0001c0001t0002g0076	1	178	0.0056	-29	c.592 others(50): Show c.5921+25504_5921+25532delTGTTACAATCTCAGGCAGTGTAAT TACAC	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	37/56			chr4	TogoVar
LRBA_chr4_150259435_151020284	150658746	TCTCCCTC others(22): Show TCTCCCTCTCCCTCTCCCTCTCCCTCTCCC	T T	intron_variant intron_variant	MODIFIER	HG03225.hp2 HG03225.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0062 a0001c0001t0001g0062	1	163	0.0061	-29	c.592 others(50): Show c.5921+24776_5921+24804delGGGAGAGGGAGAGGGAGAGGGAGA GGGAG	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	37/56			chr4	TogoVar
LRFN5_chr14_41601876_41909549	41764784	GTGTGCAG others(22): Show GTGTGCAGAATACATATATATGATTATATA	G G	intron_variant intron_variant	MODIFIER	NA18906.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0022 a0001c0001t0022	a0001c0001t0022g0003 a0001c0001t0022g0003	1	278	0.0036	-29	c.-19 others(48): Show c.-196-2067_-196-2039delTGCAGAATACATATATATGATTATAT ATG	LRFN5	ENSG00000165379.14	transcript	ENST00000298119.9	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr14	TogoVar
LRMDA_chr10_75426624_76565168	75765171	GCTTTGGG others(22): Show GCTTTGGGGTATGAGGAAGAGGAGGACACT	G G	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG00642.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0008 a0001c0002t0008	a0001c0002t0008g0025 a0001c0002t0008g0025	1	46	0.0217	-29	c.132 others(50): Show c.132-270831_132-270803delGGGTATGAGGAAGAGGAGGACACT CTTTG	LRMDA	ENSG00000148655.16	transcript	ENST00000611255.5	protein_coding	2/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRP12_chr8_104484236_104594258	104547292	CATATTTT others(22): Show CATATTTTGTATATAATATACAATTCTGTT	C C	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG02630.hp1 HG02717.hp1 HG00738.hp2 HG02630.hp1 HG02717.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0010 a0001c0001t0001g0186 a0001c0001t0001g0010 a0001c0001t0001g0186	3	316	0.0095	-29	c.80- others(46): Show c.80-15358_80-15330delAACAGAATTGTATATTATATACAAAATA T	LRP12	ENSG00000147650.12	transcript	ENST00000276654.10	protein_coding	1/6			chr8	TogoVar
LRP1B_chr2_140226423_142136016	140843055	GGTTTTTT others(22): Show GGTTTTTTTTTTGTTTTTTTTTTTTTGTTT	G G	intron_variant intron_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0023 a0001c0001t0006g0023	1	28	0.0357	-29	c.494 others(48): Show c.4940-1992_4940-1964delAAACAAAAAAAAAAAAACAAAAAAAA AAC	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	29/90			chr2	TogoVar
LRP1B_chr2_140226423_142136016	141467107	TATATATA others(22): Show TATATATATATATATATCTATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02451.hp1 HG02451.hp2 others(5): Show HG02145.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02559.hp2 HG02630.hp2 HG02965.hp2 NA19240.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0012 a0001c0014 a0001c0015 others(5): Show a0001c0012 a0001c0014 a0001c0015 a0001c0017 a0001c0022 a0002c0006 a0003c0003 a0004c0021	a0001c0012t0003 a0001c0014t0004 a0001c0015t0009 others(5): Show a0001c0012t0003 a0001c0014t0004 a0001c0015t0009 a0001c0017t0006 a0001c0022t0004 a0002c0006t0002 a0003c0003t0002 a0004c0021t0001	a0001c0012t0003g0005 a0001c0014t0004g0001 a0001c0015t0009g0017 others(5): Show a0001c0012t0003g0005 a0001c0014t0004g0001 a0001c0015t0009g0017 a0001c0017t0006g0015 a0001c0022t0004g0003 a0002c0006t0002g0025 a0003c0003t0002g0027 a0004c0021t0001g0026	8	28	0.2857	-29	c.343 others(48): Show c.343+13260_343+13288delTATATATATATAGATATATATATATA TAT	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	3/90			chr2	TogoVar
LRP1B_chr2_140226423_142136016	142115629	ATATTATA others(22): Show ATATTATATATGTAATATATATATTATATG	A A	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02630.hp1	a0001 a0001	a0001c0010 a0001c0010	a0001c0010t0011 a0001c0010t0011	a0001c0010t0011g0028 a0001c0010t0011g0028	1	28	0.0357	-29	c.82+ others(46): Show c.82+14990_82+15018delCATATAATATATATATTACATATATAAT A	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	1/90			chr2	TogoVar
LRP5_chr11_68307591_68454275	68443555	ATATATAT others(22): Show ATATATATATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02886.hp1 HG02886.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0001 a0001c0004t0001	a0001c0004t0001g0085 a0001c0004t0001g0085	1	210	0.0048	-29	c.448 others(48): Show c.4489-2880_4489-2852delTATATATATATATATATATATATATA TAT	LRP5	ENSG00000162337.12	transcript	ENST00000294304.12	protein_coding	21/22			chr11	TogoVar
LRRC25_chr19_18386137_18402622	18397254	TTGGCCAG others(22): Show TTGGCCAGGACGGGACCCTATGCAAATAAG	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA19054.hp2 NA19054.hp2	a0005 a0005	a0005c0008 a0005c0008	a0005c0008t0015 a0005c0008t0015	a0005c0008t0015g0062 a0005c0008t0015g0062	1	432	0.0023	-29	c.-32 others(38): Show c.-320_-292delCTTATTTGCATAGGGTCCCGTCCTGGCCA	LRRC25	ENSG00000175489.10	transcript	ENST00000339007.4	protein_coding	1/2	292		chr19	TogoVar
LRRC27_chr10_132327193_132386508	132352285	CCTCCGGG others(22): Show CCTCCGGGTGGGGCAGGCGCAGGTGCAGCG	C C	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00140.hp2 HG01070.hp2 others(8): Show HG00140.hp1 HG00140.hp2 HG01070.hp2 HG01099.hp2 HG01346.hp1 HG02559.hp1 HG02572.hp1 HG04228.hp2 NA20129.hp1 NA20300.hp1 NA20752.hp1	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0010 a0002c0004t0011 a0002c0004t0016 others(1): Show a0002c0004t0010 a0002c0004t0011 a0002c0004t0016 a0002c0004t0022	a0002c0004t0010g0019 a0002c0004t0010g0021 a0002c0004t0010g0022 others(8): Show a0002c0004t0010g0019 a0002c0004t0010g0021 a0002c0004t0010g0022 a0002c0004t0010g0023 a0002c0004t0010g0024 a0002c0004t0010g0025 a0002c0004t0011g0016 a0002c0004t0011g0017 a0002c0004t0011g0018 a0002c0004t0016g0026 a0002c0004t0022g0020	11	288	0.0382	-29	c.107 others(46): Show c.1073+538_1073+566delGGTGGGGCAGGCGCAGGTGCAGCGCTCC G	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	7/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRC27_chr10_132327193_132386508	132352600	CCTCCGTG others(22): Show CCTCCGTGTGGGGCAGGCGCAGGTGCAGCG	C C	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG02723.hp1 HG02886.hp1 others(3): Show HG02717.hp2 HG02723.hp1 HG02886.hp1 HG02896.hp1 HG02897.hp2 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0006 a0001c0001 a0001c0006	a0001c0001t0002 a0001c0006t0017 a0001c0006t0026 a0001c0001t0002 a0001c0006t0017 a0001c0006t0026	a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0014 others(3): Show a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0015 a0001c0006t0017g0113 a0001c0006t0026g0114	6	284	0.0211	-29	c.107 others(46): Show c.1073+867_1073+895delAGGTGCAGCGCTCCGTGTGGGGCAGGCG C	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	7/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRC27_chr10_132327193_132386508	132352600	CCTCCGTG others(22): Show CCTCCGTGTGGGGCAGGCGCAGGTGCAGCG	G G	intron_variant intron_variant	MODIFIER	NA18940.hp1 NA18950.hp1 NA18969.hp2 NA18940.hp1 NA18950.hp1 NA18969.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0040 a0001c0001t0001 a0001c0001t0040	a0001c0001t0001g0143 a0001c0001t0001g0172 a0001c0001t0040g0005 a0001c0001t0001g0143 a0001c0001t0001g0172 a0001c0001t0040g0005	3	281	0.0107	-29	c.107 others(46): Show c.1073+847_1073+875delCCTCCGTGTGGGGCAGGCGCAGGTGCAG C	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	7/10			chr10	TogoVar
LRRC27_chr10_132327193_132386508	132358325	ATGGAGCA others(22): Show ATGGAGCAGCGTGGGGAGGAGCCGAGGTGG	A A	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0241 a0001c0002t0003g0241	1	287	0.0035	-29	c.117 others(48): Show c.1170+2468_1170+2496delGTGGAGCAGCGTGGGGAGGAGCCGAG GTG	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	8/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRC27_chr10_132327193_132386508	132358383	ATGGAGCA others(22): Show ATGGAGCAGCGTGGGGAGGAGCCGAGGTGG	A A	intron_variant intron_variant	MODIFIER	HG01257.hp1 NA18947.hp2 NA19009.hp2 HG01257.hp1 NA18947.hp2 NA19009.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0072 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0072 a0001c0001t0001g0084 a0001c0001t0001g0085	3	232	0.0129	-29	c.117 others(48): Show c.1170+2526_1170+2554delGTGGAGCAGCGTGGGGAGGAGCCGAG GTG	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	8/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRC27_chr10_132327193_132386508	132358508	CGTGGGGA others(22): Show CGTGGGGAGGAGCCGAGGTGGTGGAGCAGT	C C	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0194 a0001c0001t0002g0194	1	191	0.0052	-29	c.117 others(48): Show c.1170+2680_1170+2708delTGTGGGGAGGAGCCGAGGTGGTGGAG CAG	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	8/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRC27_chr10_132327193_132386508	132358672	GGAGCAGT others(22): Show GGAGCAGTGTGGGGAGGAGCCGAGGTGGTA	G G	intron_variant intron_variant	MODIFIER	HG02071.hp2 HG02071.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0246 a0001c0002t0003g0246	1	282	0.0035	-29	c.117 others(48): Show c.1171-2764_1171-2736delGAGGTGGTAGAGCAGTGTGGGGAGGA GCC	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	8/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRC27_chr10_132327193_132386508	132358693	GAGGTGGT others(22): Show GAGGTGGTAGAGCAGTGTGGGGAGGAGCCA	G G	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00673.hp2 HG01358.hp2 others(8): Show HG00323.hp1 HG00673.hp2 HG01358.hp2 HG02080.hp1 HG03130.hp2 NA18940.hp1 NA18969.hp2 NA19000.hp1 NA19005.hp2 NA19010.hp1 NA19079.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0010 a0001c0001 a0001c0002 a0001c0010	a0001c0001t0001 a0001c0001t0013 a0001c0001t0035 others(3): Show a0001c0001t0001 a0001c0001t0013 a0001c0001t0035 a0001c0001t0040 a0001c0002t0003 a0001c0010t0001	a0001c0001t0001g0140 a0001c0001t0001g0143 a0001c0001t0001g0144 others(8): Show a0001c0001t0001g0140 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0146 a0001c0001t0001g0164 a0001c0001t0001g0196 a0001c0001t0013g0126 a0001c0001t0035g0005 a0001c0001t0040g0005 a0001c0002t0003g0255 a0001c0010t0001g0118	11	266	0.0414	-29	c.117 others(48): Show c.1171-2756_1171-2728delAGAGCAGTGTGGGGAGGAGCCAAGGT GGT	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	8/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRC27_chr10_132327193_132386508	132358821	GGGAAGGA others(22): Show GGGAAGGAGCCGAGCTGGTGGAGCAGCGTA	G G	intron_variant intron_variant	MODIFIER	HG00099.hp1 NA18959.hp2 NA18966.hp1 others(3): Show HG00099.hp1 NA18959.hp2 NA18966.hp1 NA19000.hp2 NA19060.hp1 NA19086.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0002t0003 others(1): Show a0001c0001t0001 a0001c0002t0001 a0001c0002t0003 a0001c0002t0019	a0001c0001t0001g0161 a0001c0001t0001g0175 a0001c0002t0001g0258 others(3): Show a0001c0001t0001g0161 a0001c0001t0001g0175 a0001c0002t0001g0258 a0001c0002t0001g0259 a0001c0002t0003g0241 a0001c0002t0019g0238	6	286	0.0210	-29	c.117 others(48): Show c.1171-2633_1171-2605delAAGGAGCCGAGCTGGTGGAGCAGCGT AGG	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	8/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRC27_chr10_132327193_132386508	132358824	AAGGAGCC others(22): Show AAGGAGCCGAGCTGGTGGAGCAGCGTAGGG	A A	intron_variant intron_variant	MODIFIER	HG01433.hp1 HG02559.hp1 HG02572.hp1 others(5): Show HG01433.hp1 HG02559.hp1 HG02572.hp1 HG02622.hp2 HG02818.hp2 HG03471.hp2 NA18962.hp2 NA19011.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0002c0004	a0001c0001t0002 a0001c0002t0003 a0001c0002t0004 others(3): Show a0001c0001t0002 a0001c0002t0003 a0001c0002t0004 a0001c0002t0042 a0001c0003t0006 a0002c0004t0011	a0001c0001t0002g0189 a0001c0001t0002g0190 a0001c0002t0003g0248 others(5): Show a0001c0001t0002g0189 a0001c0001t0002g0190 a0001c0002t0003g0248 a0001c0002t0004g0265 a0001c0002t0042g0228 a0001c0003t0006g0105 a0002c0004t0011g0017 a0002c0004t0011g0018	8	232	0.0345	-29	c.117 others(48): Show c.1171-2622_1171-2594delCTGGTGGAGCAGCGTAGGGAGGAGCC GAG	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	8/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRC27_chr10_132327193_132386508	132358919	GAGGTGGT others(22): Show GAGGTGGTAGAGCAGTGTGGGGAGGAGCCA	G G	intron_variant intron_variant	MODIFIER	HG02080.hp2 HG02622.hp2 NA19010.hp2 HG02080.hp2 HG02622.hp2 NA19010.hp2	a0001 a0001	a0001c0002 a0001c0003 a0001c0002 a0001c0003	a0001c0002t0024 a0001c0002t0055 a0001c0003t0006 a0001c0002t0024 a0001c0002t0055 a0001c0003t0006	a0001c0002t0024g0222 a0001c0002t0055g0262 a0001c0003t0006g0105 a0001c0002t0024g0222 a0001c0002t0055g0262 a0001c0003t0006g0105	3	285	0.0105	-29	c.117 others(48): Show c.1171-2530_1171-2502delAGAGCAGTGTGGGGAGGAGCCAAGGT GGT	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	8/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRC27_chr10_132327193_132386508	132358983	GAGCGTGG others(22): Show GAGCGTGGGAAGGAGCCGAGGTGGTGGAGC	G G	intron_variant intron_variant	MODIFIER	NA18984.hp1 NA18984.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0145 a0001c0001t0001g0145	1	227	0.0044	-29	c.117 others(48): Show c.1171-2465_1171-2437delAAGGAGCCGAGGTGGTGGAGCAGCGT GGG	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	8/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRC27_chr10_132327193_132386508	132359125	GAGCGTGG others(22): Show GAGCGTGGGAAGGAGCCGAGGTGGTGGAGC	G G	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00642.hp2 HG01243.hp2 others(3): Show HG00423.hp2 HG00642.hp2 HG01243.hp2 HG01256.hp2 NA18951.hp1 NA19082.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0004 a0001c0002t0003 a0001c0002t0004	a0001c0002t0003g0231 a0001c0002t0003g0233 a0001c0002t0003g0240 others(3): Show a0001c0002t0003g0231 a0001c0002t0003g0233 a0001c0002t0003g0240 a0001c0002t0004g0225 a0001c0002t0004g0227 a0001c0002t0004g0261	6	268	0.0224	-29	c.117 others(48): Show c.1171-2323_1171-2295delAAGGAGCCGAGGTGGTGGAGCAGCGT GGG	LRRC27	ENSG00000148814.18	transcript	ENST00000368614.8	protein_coding	8/10		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRC39_chr1_100143448_100183256	100175074	CCCTGAGA others(22): Show CCCTGAGAAGCAGATGCCAGCACCATGCTT	C C	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00280.hp2 HG00323.hp1 others(209): Show HG00140.hp2 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00597.hp1 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00735.hp1 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01074.hp1 HG01074.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp2 HG01934.hp1 HG01934.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02040.hp1 HG02040.hp2 HG02132.hp1 HG02132.hp2 HG02148.hp1 HG02148.hp2 HG02165.hp1 HG02165.hp2 HG02258.hp2 HG02280.hp2 HG02451.hp2 HG02486.hp2 HG02559.hp1 HG02572.hp1 HG02602.hp1 HG02683.hp1 HG02717.hp2 HG02723.hp1 HG02735.hp1 HG02735.hp2 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02895.hp1 HG02897.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03098.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03490.hp1 HG03490.hp2 HG03540.hp2 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03927.hp2 HG03942.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp1 NA18747.hp1 NA18747.hp2 NA18942.hp1 NA18942.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18948.hp1 NA18948.hp2 NA18953.hp1 NA18955.hp1 NA18955.hp2 NA18960.hp1 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18962.hp2 NA18964.hp1 NA18964.hp2 NA18967.hp1 NA18968.hp1 NA18971.hp1 NA18971.hp2 NA18977.hp1 NA18977.hp2 NA18978.hp1 NA18978.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18989.hp1 NA18989.hp2 NA18993.hp1 NA18993.hp2 NA18994.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp2 NA19000.hp1 NA19002.hp1 NA19002.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19030.hp2 NA19043.hp2 NA19057.hp2 NA19062.hp1 NA19064.hp1 NA19064.hp2 NA19066.hp1 NA19066.hp2 NA19070.hp1 NA19070.hp2 NA19076.hp1 NA19076.hp2 NA19078.hp1 NA19078.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0005t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(113): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0008 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0058 a0001c0001t0001g0081 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0112 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0135 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0002g0004 a0001c0001t0002g0006 a0001c0001t0002g0036 a0001c0001t0002g0039 a0001c0001t0002g0082 a0001c0001t0002g0091 a0001c0001t0002g0092 a0001c0001t0002g0093 a0001c0001t0002g0094 a0001c0001t0002g0095 a0001c0001t0002g0134 a0001c0001t0002g0142 a0001c0001t0002g0160 a0001c0001t0004g0100 a0001c0001t0005g0099 a0001c0005t0001g0083	212	286	0.7413	-29	c.-11 others(48): Show c.-118-1733_-118-1705delAAGCATGGTGCTGGCATCTGCTTCTC AGG	LRRC39	ENSG00000122477.14	transcript	ENST00000370137.6	protein_coding	1/9			chr1	TogoVar
LRRC3_chr21_44450510_44467196	44465672	CTGTACAC others(22): Show CTGTACACACACGCGCATGCTCACTCTCCT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02970.hp2 HG03516.hp1 NA18522.hp1 HG02970.hp2 HG03516.hp1 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0001 a0001c0001t0005g0001	3	424	0.0071	-29	c.82 others(40): Show c.8255_*8283delTGTACACACACGCGCATGCTCACTCTCCT	LRRC3	ENSG00000160233.8	transcript	ENST00000291592.6	protein_coding		3477		chr21	TogoVar
LRRC4B_chr19_50511892_50573435	50513457	GGGGGACA others(22): Show GGGGGACAGAGACCCAGAGAGAGAGGAGGT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02055.hp1 HG02647.hp2 HG02055.hp1 HG02647.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0064 a0001c0001t0003g0355 a0001c0001t0001g0064 a0001c0001t0003g0355	2	357	0.0056	-29	c.40 others(40): Show c.4085_*4113delACCTCCTCTCTCTCTGGGTCTCTGTCCCC	LRRC4B	ENSG00000131409.13	transcript	ENST00000652263.1	protein_coding		3434		chr19	TogoVar
LRRC4B_chr19_50511892_50573435	50520219	AAAAAAAA others(22): Show AAAAAAAAAAAAAAAAAAAAAAAAAAAAAG	A A	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00558.hp1 HG01884.hp2 others(14): Show HG00423.hp2 HG00558.hp1 HG01884.hp2 HG02015.hp2 HG02040.hp2 HG02055.hp2 HG02056.hp2 HG02165.hp2 HG02965.hp1 NA18612.hp1 NA18973.hp2 NA18995.hp1 NA19002.hp2 NA19066.hp1 NA19081.hp1 NA19087.hp2 NA19088.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0005 a0001c0001 a0001c0003 a0001c0005	a0001c0001t0001 a0001c0001t0008 a0001c0003t0001 others(1): Show a0001c0001t0001 a0001c0001t0008 a0001c0003t0001 a0001c0005t0001	a0001c0001t0001g0035 a0001c0001t0001g0089 a0001c0001t0001g0112 others(14): Show a0001c0001t0001g0035 a0001c0001t0001g0089 a0001c0001t0001g0112 a0001c0001t0001g0117 a0001c0001t0001g0131 a0001c0001t0001g0146 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0163 a0001c0001t0001g0172 a0001c0001t0001g0188 a0001c0001t0001g0197 a0001c0001t0001g0263 a0001c0001t0008g0009 a0001c0003t0001g0130 a0001c0005t0001g0018 a0001c0005t0001g0286	17	358	0.0475	-29	c.298 others(44): Show c.298-833_298-805delCTTTTTTTTTTTTTTTTTTTTTTTTTTTT	LRRC4B	ENSG00000131409.13	transcript	ENST00000652263.1	protein_coding	2/2			chr19	TogoVar
LRRC4B_chr19_50511892_50573435	50520222	AAAAAAAA others(22): Show AAAAAAAAAAAAAAAAAAAAAAAAAAGAAG	A A	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG01928.hp1 HG02293.hp2 others(3): Show HG00438.hp1 HG01928.hp1 HG02293.hp2 HG02615.hp2 HG03669.hp2 NA19012.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0086 a0001c0001t0002g0120 a0001c0001t0002g0222 others(3): Show a0001c0001t0001g0086 a0001c0001t0002g0120 a0001c0001t0002g0222 a0001c0001t0002g0234 a0001c0001t0002g0241 a0001c0001t0002g0341	6	358	0.0168	-29	c.298 others(44): Show c.298-836_298-808delCTTCTTTTTTTTTTTTTTTTTTTTTTTTT	LRRC4B	ENSG00000131409.13	transcript	ENST00000652263.1	protein_coding	2/2			chr19	TogoVar
LRRC4C_chr11_40109209_41464652	40468538	TATAGCCT others(22): Show TATAGCCTAGCTAGGTTGACTTAAAATTAA	T T	intron_variant intron_variant	MODIFIER	HG03540.hp2 NA18906.hp2 HG03540.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0006 a0001c0001t0001g0040 a0001c0001t0001g0006 a0001c0001t0001g0040	2	48	0.0417	-29	c.-26 others(52): Show c.-269-148846_-269-148818delTTAATTTTAAGTCAACCTAGCT AGGCTAT	LRRC4C	ENSG00000148948.8	transcript	ENST00000528697.6	protein_coding	3/6			chr11	TogoVar
LRRC4C_chr11_40109209_41464652	40665320	AAAAAAAT others(22): Show AAAAAAATATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02896.hp1 HG02572.hp1 HG02896.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0002t0002 a0001c0001t0002 a0001c0002t0002	a0001c0001t0002g0026 a0001c0002t0002g0046 a0001c0001t0002g0026 a0001c0002t0002g0046	2	45	0.0444	-29	c.-40 others(50): Show c.-406-17071_-406-17043delATATATATATATATATATATATAT TTTTT	LRRC4C	ENSG00000148948.8	transcript	ENST00000528697.6	protein_coding	2/6			chr11	TogoVar
LRRC4C_chr11_40109209_41464652	41304453	CTGCCCGG others(22): Show CTGCCCGGCCGCCCCTACTGGGAAGTGAGG	C C	intron_variant intron_variant	MODIFIER	HG01261.hp1 HG02698.hp1 HG01261.hp1 HG02698.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0035 a0001c0001t0002g0032 a0001c0001t0001g0035 a0001c0001t0002g0032	2	48	0.0417	-29	c.-49 others(52): Show c.-496+154949_-496+154977delCCTCACTTCCCAGTAGGGGCGG CCGGGCA	LRRC4C	ENSG00000148948.8	transcript	ENST00000528697.6	protein_coding	1/6			chr11	TogoVar
LRRC53_chr1_74464376_74517611	74500603	CAAAAAAA others(22): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG03486.hp2 HG03486.hp2	a0016 a0016	a0016c0019 a0016c0019	a0016c0019t0001 a0016c0019t0001	a0016c0019t0001g0223 a0016c0019t0001g0223	1	5	0.2000	-29	c.-27 others(48): Show c.-27+11894_-27+11922delTTTTTTTTTTTTTTTTTTTTTTTTTT TTT	LRRC53	ENSG00000162621.7	transcript	ENST00000294635.5	protein_coding	1/4			chr1	TogoVar
LRRC8C_chr1_89628120_89724533	89666751	CTCATTTC others(22): Show CTCATTTCTCATTTCATTGGTTCAGCAATT	C C	intron_variant intron_variant	MODIFIER	NA18967.hp1 NA18967.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0193 a0001c0001t0001g0193	1	266	0.0038	-29	c.-4- others(46): Show c.-4-19718_-4-19690delTCATTTCTCATTTCATTGGTTCAGCAAT T	LRRC8C	ENSG00000171488.15	transcript	ENST00000370454.9	protein_coding	1/2			chr1	TogoVar
LRRIQ1_chr12_85031351_85250105	85198035	TATATAAT others(22): Show TATATAATATATTATATAATTATATATAAC	T T	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00558.hp2 HG00621.hp1 others(60): Show HG00099.hp2 HG00558.hp2 HG00621.hp1 HG00639.hp1 HG00738.hp2 HG00741.hp1 HG01069.hp2 HG01099.hp1 HG01123.hp2 HG01256.hp2 HG01496.hp2 HG01516.hp2 HG01891.hp2 HG02040.hp2 HG02055.hp1 HG02080.hp2 HG02109.hp2 HG02135.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02615.hp2 HG02630.hp1 HG02647.hp1 HG02895.hp2 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG03098.hp1 HG03098.hp2 HG03139.hp2 HG03209.hp1 HG03486.hp1 HG03516.hp2 HG03540.hp1 HG03579.hp2 HG03831.hp1 HG03927.hp1 HG03942.hp1 NA18940.hp1 NA18957.hp2 NA18968.hp2 NA18972.hp1 NA18978.hp1 NA18980.hp2 NA18982.hp1 NA18986.hp1 NA19002.hp2 NA19003.hp2 NA19004.hp2 NA19057.hp2 NA19058.hp1 NA19060.hp1 NA19063.hp2 NA19065.hp1 NA19070.hp1 NA19074.hp2 NA19079.hp1 NA19084.hp2	a0001 a0004 a0013 others(1): Show a0001 a0004 a0013 a0014	a0001c0001 a0001c0013 a0001c0016 others(3): Show a0001c0001 a0001c0013 a0001c0016 a0004c0011 a0013c0018 a0014c0019	a0001c0001t0001 a0001c0001t0002 a0001c0013t0001 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0013t0001 a0001c0016t0003 a0004c0011t0001 a0013c0018t0001 a0014c0019t0001	a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 others(60): Show a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0096 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0156 a0001c0001t0001g0160 a0001c0001t0002g0013 a0001c0001t0002g0124 a0001c0001t0002g0125 a0001c0001t0002g0126 a0001c0001t0002g0127 a0001c0001t0002g0128 a0001c0001t0002g0129 a0001c0001t0002g0130 a0001c0001t0002g0131 a0001c0001t0002g0132 a0001c0001t0002g0133 a0001c0001t0002g0135 a0001c0001t0002g0136 a0001c0001t0002g0137 a0001c0001t0002g0138 a0001c0001t0002g0139 a0001c0001t0002g0140 a0001c0001t0002g0141 a0001c0001t0002g0142 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0145 a0001c0001t0002g0146 a0001c0001t0002g0147 a0001c0001t0002g0148 a0001c0001t0002g0149 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0157 a0001c0013t0001g0095 a0001c0013t0001g0154 a0001c0016t0003g0085 a0004c0011t0001g0109 a0013c0018t0001g0084 a0014c0019t0001g0097	63	226	0.2788	-29	c.482 others(50): Show c.4823-31477_4823-31449delAATATATTATATAATTATATATAA CATAT	LRRIQ1	ENSG00000133640.20	transcript	ENST00000393217.7	protein_coding	24/26		INFO_REALIGN_3_PRIME	chr12	TogoVar
LRRN1_chr3_3794431_3854834	3834524	GGATATAT others(22): Show GGATATATATATATATATATATATATATAT	G G	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG01192.hp1 HG02071.hp2 others(3): Show HG00408.hp2 HG01192.hp1 HG02071.hp2 NA18980.hp2 NA19062.hp1 NA19083.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0005 a0001c0001 a0001c0003 a0001c0005	a0001c0001t0003 a0001c0003t0001 a0001c0003t0019 others(1): Show a0001c0001t0003 a0001c0003t0001 a0001c0003t0019 a0001c0005t0013	a0001c0001t0003g0302 a0001c0003t0001g0174 a0001c0003t0001g0213 others(3): Show a0001c0001t0003g0302 a0001c0003t0001g0174 a0001c0003t0001g0213 a0001c0003t0019g0175 a0001c0003t0019g0182 a0001c0005t0013g0052	6	420	0.0143	-29	c.-27 others(48): Show c.-278-9828_-278-9800delATATATATATATATATATGATATATA TAT	LRRN1	ENSG00000175928.6	transcript	ENST00000319331.4	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr3	TogoVar
LRRN1_chr3_3794431_3854834	3843499	ACCACAAT others(22): Show ACCACAATCTTTAGAATATTTTCATCATCT	A A	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00609.hp1 HG00642.hp2 others(56): Show HG00438.hp2 HG00609.hp1 HG00642.hp2 HG00733.hp2 HG00735.hp1 HG00741.hp2 HG01069.hp1 HG01168.hp1 HG01243.hp2 HG01261.hp1 HG01361.hp2 HG01884.hp2 HG01928.hp2 HG01952.hp1 HG01993.hp2 HG02015.hp2 HG02027.hp1 HG02109.hp1 HG02109.hp2 HG02145.hp1 HG02148.hp1 HG02451.hp2 HG02572.hp1 HG02572.hp2 HG02615.hp1 HG02630.hp1 HG02647.hp1 HG02723.hp1 HG02723.hp2 HG02886.hp1 HG02965.hp1 HG02965.hp2 HG02976.hp2 HG03139.hp1 HG03225.hp2 HG03453.hp2 HG03486.hp1 HG03579.hp1 HG03579.hp2 HG03942.hp1 HG04228.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18747.hp1 NA18943.hp2 NA18947.hp1 NA18973.hp2 NA18990.hp2 NA19007.hp1 NA19043.hp1 NA19054.hp2 NA19060.hp1 NA19074.hp1 NA19079.hp1 NA19085.hp1 NA19240.hp1 NA20129.hp2 NA21309.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0004 a0001c0005 others(1): Show a0001c0001 a0001c0004 a0001c0005 a0003c0008	a0001c0001t0010 a0001c0001t0029 a0001c0001t0033 others(20): Show a0001c0001t0010 a0001c0001t0029 a0001c0001t0033 a0001c0001t0040 a0001c0001t0051 a0001c0001t0053 a0001c0001t0075 a0001c0001t0077 a0001c0004t0005 a0001c0004t0008 a0001c0004t0011 a0001c0004t0021 a0001c0004t0022 a0001c0004t0030 a0001c0004t0046 a0001c0004t0048 a0001c0004t0049 a0001c0004t0050 a0001c0004t0052 a0001c0004t0079 a0001c0005t0025 a0001c0005t0071 a0003c0008t0002	a0001c0001t0010g0099 a0001c0001t0010g0153 a0001c0001t0010g0220 others(50): Show a0001c0001t0010g0099 a0001c0001t0010g0153 a0001c0001t0010g0220 a0001c0001t0010g0225 a0001c0001t0010g0227 a0001c0001t0010g0242 a0001c0001t0029g0117 a0001c0001t0029g0118 a0001c0001t0033g0279 a0001c0001t0040g0184 a0001c0001t0051g0154 a0001c0001t0053g0082 a0001c0001t0075g0256 a0001c0001t0077g0353 a0001c0004t0005g0001 a0001c0004t0005g0038 a0001c0004t0005g0231 a0001c0004t0005g0294 a0001c0004t0005g0315 a0001c0004t0005g0329 a0001c0004t0005g0330 a0001c0004t0005g0331 a0001c0004t0005g0333 a0001c0004t0005g0336 a0001c0004t0008g0001 a0001c0004t0008g0025 a0001c0004t0008g0191 a0001c0004t0008g0192 a0001c0004t0008g0233 a0001c0004t0008g0263 a0001c0004t0008g0332 a0001c0004t0011g0015 a0001c0004t0011g0064 a0001c0004t0011g0065 a0001c0004t0011g0083 a0001c0004t0011g0086 a0001c0004t0021g0101 a0001c0004t0021g0104 a0001c0004t0021g0229 a0001c0004t0022g0058 a0001c0004t0022g0215 a0001c0004t0022g0230 a0001c0004t0030g0042 a0001c0004t0030g0044 a0001c0004t0046g0245 a0001c0004t0048g0147 a0001c0004t0049g0347 a0001c0004t0050g0103 a0001c0004t0052g0155 a0001c0004t0079g0038 a0001c0005t0025g0107 a0001c0005t0071g0250 a0003c0008t0002g0152	59	420	0.1405	-29	c.-27 others(46): Show c.-278-863_-278-835delCACAATCTTTAGAATATTTTCATCATCT C	LRRN1	ENSG00000175928.6	transcript	ENST00000319331.4	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr3	TogoVar
LSAMP_chr3_115797374_116450487	115885674	ATAGATGC others(22): Show ATAGATGCTTCTTATCAATCAAGAAGCATT	A A	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG01361.hp2 HG02145.hp1 others(1): Show HG01106.hp1 HG01361.hp2 HG02145.hp1 HG03130.hp1	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0010 a0001c0001t0030 a0001c0001t0058 others(1): Show a0001c0001t0010 a0001c0001t0030 a0001c0001t0058 a0001c0005t0001	a0001c0001t0010g0043 a0001c0001t0030g0070 a0001c0001t0058g0061 others(1): Show a0001c0001t0010g0043 a0001c0001t0030g0070 a0001c0001t0058g0061 a0001c0005t0001g0065	4	104	0.0385	-29	c.515 others(48): Show c.515-33086_515-33058delAATGCTTCTTGATTGATAAGAAGCAT CTA	LSAMP	ENSG00000185565.13	transcript	ENST00000490035.7	protein_coding	3/6			chr3	TogoVar
LSAMP_chr3_115797374_116450487	116031538	CTTTTTTT others(22): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG03041.hp1 NA18906.hp2 HG03041.hp1 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0024 a0001c0001t0057 a0001c0001t0024 a0001c0001t0057	a0001c0001t0024g0091 a0001c0001t0057g0036 a0001c0001t0024g0091 a0001c0001t0057g0036	2	4	0.5000	-29	c.389 others(48): Show c.389-11927_389-11899delAAAAAAAAAAAAAAAAAAAAAAAAAA AAA	LSAMP	ENSG00000185565.13	transcript	ENST00000490035.7	protein_coding	2/6			chr3	TogoVar

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