Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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view	regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	external
	ZYG11B_chr1_52721453_52832336	52817807	ATATATAT others(22): Show ATATATATATTTTTTTTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	NA18974.hp1 NA18974.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0002 a0001c0006t0002	a0001c0006t0002g0298 a0001c0006t0002g0298	1	324	0.0031	-29	c.204 others(48): Show c.2044+1180_2044+1208delATATATATTTTTTTTTTTTTTTTTTT TTT		ZYG11B	ENSG00000162378.13	transcript	ENST00000294353.7	protein_coding	13/13					INFO_REALIGN_3_PRIME	chr1	TogoVar
	ZYG11B_chr1_52721453_52832336	52817811	ATATATTT others(22): Show ATATATTTTTTTTTTTTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	NA18747.hp1 NA18747.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0098 a0001c0001t0013g0098	1	335	0.0030	-29	c.204 others(48): Show c.2044+1184_2044+1212delATATTTTTTTTTTTTTTTTTTTTTTT TTT		ZYG11B	ENSG00000162378.13	transcript	ENST00000294353.7	protein_coding	13/13					INFO_REALIGN_3_PRIME	chr1	TogoVar