view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ATF7_chr12_53507054_53631382 | 53587841 | ATAT | A | intron_variant | MODIFIER | HG02056.hp2 HG02165.hp1 HG02630.hp2 others(11): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(2): Show | a0001c0001t0001g0170 a0001c0001t0001g0183 a0001c0001t0001g0190 others(11): Show |
14 | 330 | 0.0424 | -3 | c.48+ others(20): Show |
ATF7 | ENSG00000170653.19 | transcript | ENST00000420353.7 | protein_coding | 2/11 | chr12 | TogoVar | |||||||
ATF7_chr12_53507054_53631382 | 53587843 | ATTT | A | intron_variant | MODIFIER | HG02258.hp1 HG02280.hp1 HG02451.hp2 others(10): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0022 | a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0179 others(10): Show |
13 | 330 | 0.0394 | -3 | c.48+ others(20): Show |
ATF7 | ENSG00000170653.19 | transcript | ENST00000420353.7 | protein_coding | 2/11 | chr12 | TogoVar | |||||||
ATF7_chr12_53507054_53631382 | 53596396 | TGAG | T | intron_variant | MODIFIER | HG00099.hp2 HG00280.hp1 HG00597.hp2 others(40): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0027others(3): Show | a0001c0001t0001g0193 a0001c0001t0001g0195 a0001c0001t0001g0196 others(40): Show |
43 | 330 | 0.1303 | -3 | c.48+ others(18): Show |
ATF7 | ENSG00000170653.19 | transcript | ENST00000420353.7 | protein_coding | 2/11 | chr12 | TogoVar | |||||||
ATF7_chr12_53507054_53631382 | 53621788 | CAAA | C | intron_variant | MODIFIER | HG00280.hp2 HG00733.hp2 HG01168.hp2 others(31): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(4): Show | a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0170 others(31): Show |
34 | 330 | 0.1030 | -3 | c.-22 others(20): Show |
ATF7 | ENSG00000170653.19 | transcript | ENST00000420353.7 | protein_coding | 1/11 | chr12 | TogoVar | |||||||
ATF7_chr12_53507054_53631382 | 53622304 | AAAT | A | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(294): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(32): Show | a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0018 others(294): Show |
297 | 330 | 0.9000 | -3 | c.-22 others(20): Show |
ATF7 | ENSG00000170653.19 | transcript | ENST00000420353.7 | protein_coding | 1/11 | chr12 | TogoVar | |||||||
ATF7_chr12_53507054_53631382 | 53622652 | CAAA | C | intron_variant | MODIFIER | HG02145.hp1 HG02698.hp2 HG02886.hp1 others(13): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0006 | a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0151 others(13): Show |
16 | 330 | 0.0485 | -3 | c.-22 others(20): Show |
ATF7 | ENSG00000170653.19 | transcript | ENST00000420353.7 | protein_coding | 1/11 | chr12 | TogoVar | |||||||
ATG101_chr12_52064978_52082495 | 52068990 | CAAA | C | upstream_gene_variant | MODIFIER | HG00558.hp1 HG01167.hp2 HG01169.hp2 others(11): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0013 | a0001c0001t0001g0005 a0001c0001t0003g0004 a0001c0001t0003g0019 others(1): Show |
14 | 394 | 0.0355 | -3 | c.-14 others(14): Show |
ATG101 | ENSG00000123395.15 | transcript | ENST00000336854.9 | protein_coding | 987 | chr12 | TogoVar | |||||||
ATG101_chr12_52064978_52082495 | 52076288 | AAGG | A | intron_variant | MODIFIER | HG03139.hp1 HG03209.hp2 HG03225.hp1 others(1): Show |
a0002 | a0002c0002 | a0002c0002t0004 | a0002c0002t0004g0021 a0002c0002t0004g0030 a0002c0002t0004g0037 |
4 | 394 | 0.0102 | -3 | c.253 others(18): Show |
ATG101 | ENSG00000123395.15 | transcript | ENST00000336854.9 | protein_coding | 3/3 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
ATG10_chr5_81967023_82261133 | 82059405 | CACT | C | intron_variant | MODIFIER | HG00099.hp1 HG02970.hp2 HG02976.hp1 others(1): Show |
a0001a0002a0003 | a0001c0001a0002c0002a0003c0003 | a0001c0001t0009a0002c0002t0002a0003c0003t0001 | a0001c0001t0009g0150 a0002c0002t0002g0066 a0003c0003t0001g0178 others(1): Show |
4 | 226 | 0.0177 | -3 | c.216 others(18): Show |
ATG10 | ENSG00000152348.16 | transcript | ENST00000282185.8 | protein_coding | 3/7 | chr5 | TogoVar | |||||||
ATG10_chr5_81967023_82261133 | 82100772 | GTTT | G | intron_variant | MODIFIER | HG00741.hp2 HG01496.hp1 HG01884.hp1 others(19): Show |
a0001a0002a0003others(1): Show | a0001c0001a0002c0002a0003c0003others(1): Show | a0001c0001t0001a0001c0001t0009a0001c0001t0012others(6): Show | a0001c0001t0001g0009 a0001c0001t0001g0157 a0001c0001t0001g0158 others(19): Show |
22 | 226 | 0.0974 | -3 | c.216 others(22): Show |
ATG10 | ENSG00000152348.16 | transcript | ENST00000282185.8 | protein_coding | 3/7 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
ATG10_chr5_81967023_82261133 | 82141091 | GGCC | G | intron_variant | MODIFIER | HG00280.hp2 HG00738.hp1 HG01255.hp2 others(14): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0019a0002c0002t0004a0002c0002t0006others(2): Show | a0001c0001t0019g0118 a0002c0002t0004g0075 a0002c0002t0004g0076 others(14): Show |
17 | 226 | 0.0752 | -3 | c.217 others(22): Show |
ATG10 | ENSG00000152348.16 | transcript | ENST00000282185.8 | protein_coding | 3/7 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
ATG10_chr5_81967023_82261133 | 82188480 | ATAT | A | intron_variant | MODIFIER | HG02280.hp1 NA21309.hp2 |
a0001 | a0001c0001 | a0001c0001t0016 | a0001c0001t0016g0031 a0001c0001t0016g0032 |
2 | 226 | 0.0089 | -3 | c.453 others(20): Show |
ATG10 | ENSG00000152348.16 | transcript | ENST00000282185.8 | protein_coding | 5/7 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
ATG10_chr5_81967023_82261133 | 82190773 | CAAA | C | intron_variant | MODIFIER | HG00099.hp2 HG00280.hp1 HG01081.hp2 others(20): Show |
a0001a0008 | a0001c0001a0008c0008 | a0001c0001t0005a0001c0001t0007a0001c0001t0016others(7): Show | a0001c0001t0005g0010 a0001c0001t0005g0015 a0001c0001t0005g0018 others(20): Show |
23 | 226 | 0.1018 | -3 | c.453 others(22): Show |
ATG10 | ENSG00000152348.16 | transcript | ENST00000282185.8 | protein_coding | 5/7 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
ATG12_chr5_115823200_115846565 | 115825728 | TCTC | T | downstream_gene_variant | MODIFIER | HG01884.hp1 HG01891.hp1 HG02451.hp1 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0006a0001c0001t0008a0001c0001t0011others(1): Show | a0001c0001t0006g0032 a0001c0001t0008g0033 a0001c0001t0011g0043 others(3): Show |
8 | 402 | 0.0199 | -3 | c.*60 others(14): Show |
ATG12 | ENSG00000145782.13 | transcript | ENST00000509910.2 | protein_coding | 2471 | chr5 | TogoVar | |||||||
ATG12_chr5_115823200_115846565 | 115828012 | TCAC | T | downstream_gene_variant | MODIFIER | HG02280.hp1 HG03098.hp2 HG03471.hp2 |
a0001 | a0001c0001 | a0001c0001t0015a0001c0001t0026a0001c0001t0027 | a0001c0001t0015g0070 a0001c0001t0026g0076 a0001c0001t0027g0071 |
3 | 402 | 0.0075 | -3 | c.*37 others(14): Show |
ATG12 | ENSG00000145782.13 | transcript | ENST00000509910.2 | protein_coding | 187 | chr5 | TogoVar | |||||||
ATG13_chr11_46612553_46679518 | 46616831 | CAAA | C | upstream_gene_variant | MODIFIER | HG01109.hp1 HG02280.hp1 HG02818.hp2 others(5): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0008a0001c0002t0005a0001c0002t0021others(1): Show | a0001c0001t0008g0003 a0001c0001t0008g0004 a0001c0002t0005g0210 others(5): Show |
8 | 218 | 0.0367 | -3 | c.-11 others(14): Show |
ATG13 | ENSG00000175224.17 | transcript | ENST00000683050.1 | protein_coding | 721 | chr11 | TogoVar | |||||||
ATG14_chr14_55361391_55416830 | 55363020 | TCTC | T | downstream_gene_variant | MODIFIER | HG03209.hp1 NA18522.hp1 NA20300.hp1 |
a0002 | a0002c0003 | a0002c0003t0011 | a0002c0003t0011g0021 a0002c0003t0011g0022 a0002c0003t0011g0028 |
3 | 366 | 0.0082 | -3 | c.*65 others(14): Show |
ATG14 | ENSG00000126775.9 | transcript | ENST00000247178.6 | protein_coding | 3370 | chr14 | TogoVar | |||||||
ATG14_chr14_55361391_55416830 | 55363949 | CTTT | C | downstream_gene_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00323.hp1 others(29): Show |
a0001 | a0001c0001a0001c0002a0001c0004 | a0001c0001t0002a0001c0001t0017a0001c0002t0002others(2): Show | a0001c0001t0002g0133 a0001c0001t0002g0138 a0001c0001t0002g0139 others(28): Show |
32 | 366 | 0.0874 | -3 | c.*56 others(14): Show |
ATG14 | ENSG00000126775.9 | transcript | ENST00000247178.6 | protein_coding | 2441 | chr14 | TogoVar | |||||||
ATG14_chr14_55361391_55416830 | 55365058 | TAAA | T | downstream_gene_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00323.hp1 others(144): Show |
a0001a0002a0006 | a0001c0001a0001c0002a0001c0004others(3): Show | a0001c0001t0002a0001c0001t0004a0001c0001t0005others(18): Show | a0001c0001t0002g0003 a0001c0001t0002g0029 a0001c0001t0002g0033 others(137): Show |
147 | 366 | 0.4016 | -3 | c.*45 others(14): Show |
ATG14 | ENSG00000126775.9 | transcript | ENST00000247178.6 | protein_coding | 1332 | chr14 | TogoVar | |||||||
ATG14_chr14_55361391_55416830 | 55367949 | TATG | T | 3_prime_UTR_variant | MODIFIER | HG02257.hp1 HG03041.hp1 HG03195.hp1 |
a0001 | a0001c0001 | a0001c0001t0021a0001c0001t0038 | a0001c0001t0021g0187 a0001c0001t0021g0188 a0001c0001t0038g0185 |
3 | 366 | 0.0082 | -3 | c.*16 others(14): Show |
ATG14 | ENSG00000126775.9 | transcript | ENST00000247178.6 | protein_coding | 10/10 | 1667 | chr14 | TogoVar | ||||||
ATG14_chr14_55361391_55416830 | 55368145 | CATT | C | 3_prime_UTR_variant | MODIFIER | HG02280.hp1 HG02486.hp2 HG02886.hp1 others(2): Show |
a0001 | a0001c0002 | a0001c0002t0010a0001c0002t0029 | a0001c0002t0010g0009 a0001c0002t0010g0177 a0001c0002t0010g0224 others(1): Show |
5 | 366 | 0.0137 | -3 | c.*14 others(14): Show |
ATG14 | ENSG00000126775.9 | transcript | ENST00000247178.6 | protein_coding | 10/10 | 1471 | chr14 | TogoVar | ||||||
ATG14_chr14_55361391_55416830 | 55370402 | TCAC | T | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00323.hp1 others(84): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0004others(1): Show | a0001c0001t0002a0001c0001t0017a0001c0002t0002others(9): Show | a0001c0001t0002g0133 a0001c0001t0002g0138 a0001c0001t0002g0139 others(80): Show |
87 | 366 | 0.2377 | -3 | c.117 others(20): Show |
ATG14 | ENSG00000126775.9 | transcript | ENST00000247178.6 | protein_coding | 9/9 | chr14 | TogoVar | |||||||
ATG14_chr14_55361391_55416830 | 55372564 | TCCC | T | intron_variant | MODIFIER | HG01106.hp1 HG01175.hp1 HG02257.hp1 others(9): Show |
a0001a0002 | a0001c0001a0002c0007 | a0001c0001t0007a0001c0001t0021a0001c0001t0022others(2): Show | a0001c0001t0007g0105 a0001c0001t0007g0106 a0001c0001t0007g0107 others(9): Show |
12 | 366 | 0.0328 | -3 | c.117 others(22): Show |
ATG14 | ENSG00000126775.9 | transcript | ENST00000247178.6 | protein_coding | 9/9 | chr14 | TogoVar | |||||||
ATG14_chr14_55361391_55416830 | 55386234 | AGTG | A | intron_variant | MODIFIER | HG00741.hp1 HG01069.hp1 HG01074.hp1 others(11): Show |
a0001a0006 | a0001c0001a0006c0012 | a0001c0001t0005a0001c0001t0012a0006c0012t0012 | a0001c0001t0005g0040 a0001c0001t0005g0190 a0001c0001t0005g0192 others(11): Show |
14 | 366 | 0.0383 | -3 | c.410 others(18): Show |
ATG14 | ENSG00000126775.9 | transcript | ENST00000247178.6 | protein_coding | 4/9 | chr14 | TogoVar | |||||||
ATG14_chr14_55361391_55416830 | 55395110 | CCTG | C | intron_variant | MODIFIER | HG00741.hp1 HG01069.hp1 HG01074.hp1 others(11): Show |
a0001a0006 | a0001c0001a0006c0012 | a0001c0001t0005a0001c0001t0012a0006c0012t0012 | a0001c0001t0005g0040 a0001c0001t0005g0190 a0001c0001t0005g0192 others(11): Show |
14 | 366 | 0.0383 | -3 | c.327 others(18): Show |
ATG14 | ENSG00000126775.9 | transcript | ENST00000247178.6 | protein_coding | 3/9 | chr14 | TogoVar | |||||||
ATG14_chr14_55361391_55416830 | 55401226 | CTTG | C | intron_variant | MODIFIER | HG02572.hp1 HG02615.hp2 HG02809.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0007 | a0001c0001t0007g0105 a0001c0001t0007g0106 a0001c0001t0007g0107 others(3): Show |
6 | 366 | 0.0164 | -3 | c.222 others(20): Show |
ATG14 | ENSG00000126775.9 | transcript | ENST00000247178.6 | protein_coding | 1/9 | chr14 | TogoVar | |||||||
ATG16L1_chr2_233246673_233300669 | 233298407 | CAAA | C | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(97): Show |
a0001a0002a0004 | a0001c0001a0002c0002a0002c0004others(2): Show | a0001c0001t0003a0001c0001t0004a0001c0001t0011others(10): Show | a0001c0001t0003g0045 a0001c0001t0003g0046 a0001c0001t0003g0047 others(86): Show |
100 | 354 | 0.2825 | -3 | c.*40 others(14): Show |
ATG16L1 | ENSG00000085978.22 | transcript | ENST00000392017.9 | protein_coding | 2739 | chr2 | TogoVar | |||||||
ATG16L2_chr11_72809411_72834635 | 72811324 | CTTT | C | upstream_gene_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(185): Show |
a0001a0002a0005others(2): Show | a0001c0001a0001c0004a0002c0002others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(6): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(56): Show |
188 | 440 | 0.4273 | -3 | c.-31 others(14): Show |
ATG16L2 | ENSG00000168010.11 | transcript | ENST00000321297.10 | protein_coding | 3086 | chr11 | TogoVar | |||||||
ATG2A_chr11_64889546_64922209 | 64897124 | TCTC | T | intron_variant | MODIFIER | HG01109.hp1 HG01934.hp2 HG02055.hp2 others(14): Show |
a0003a0008a0023others(2): Show | a0003c0003a0008c0011a0008c0025others(3): Show | a0003c0003t0001a0008c0011t0001a0008c0025t0001others(3): Show | a0003c0003t0001g0018 a0003c0003t0001g0031 a0003c0003t0001g0078 others(10): Show |
17 | 372 | 0.0457 | -3 | c.515 others(20): Show |
ATG2A | ENSG00000110046.14 | transcript | ENST00000377264.8 | protein_coding | 37/40 | chr11 | TogoVar | |||||||
ATG2A_chr11_64889546_64922209 | 64904819 | TCTA | T | intron_variant | MODIFIER | HG01516.hp2 HG01517.hp1 HG02280.hp2 others(3): Show |
a0001a0011a0014 | a0001c0001a0011c0014a0014c0047 | a0001c0001t0001a0001c0001t0002a0011c0014t0001others(1): Show | a0001c0001t0001g0040 a0001c0001t0002g0048 a0001c0001t0002g0049 others(2): Show |
6 | 372 | 0.0161 | -3 | c.346 others(20): Show |
ATG2A | ENSG00000110046.14 | transcript | ENST00000377264.8 | protein_coding | 24/40 | chr11 | TogoVar | |||||||
ATG2A_chr11_64889546_64922209 | 64915142 | CCCA | C | intron_variant | MODIFIER | HG00280.hp1 HG00280.hp2 HG00323.hp1 others(166): Show |
a0001a0002a0004others(19): Show | a0001c0001a0001c0002a0001c0004others(30): Show | a0001c0001t0001a0001c0001t0002a0001c0002t0001others(31): Show | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0014 others(95): Show |
169 | 372 | 0.4543 | -3 | c.172 others(18): Show |
ATG2A | ENSG00000110046.14 | transcript | ENST00000377264.8 | protein_coding | 1/40 | chr11 | TogoVar | |||||||
ATG2B_chr14_96274195_96368341 | 96276712 | CTTG | C | downstream_gene_variant | MODIFIER | HG01255.hp2 HG02559.hp1 HG02630.hp2 others(3): Show |
a0005a0008 | a0005c0010a0008c0014 | a0005c0010t0009a0008c0014t0009 | a0005c0010t0009g0105 a0005c0010t0009g0106 a0005c0010t0009g0107 others(2): Show |
6 | 356 | 0.0169 | -3 | c.*90 others(14): Show |
ATG2B | ENSG00000066739.12 | transcript | ENST00000359933.6 | protein_coding | 2482 | chr14 | TogoVar | |||||||
ATG2B_chr14_96274195_96368341 | 96304615 | CAAA | C | intron_variant | MODIFIER | HG00621.hp1 HG02040.hp1 HG02523.hp2 others(9): Show |
a0004 | a0004c0006a0004c0043 | a0004c0006t0010a0004c0006t0013a0004c0043t0063 | a0004c0006t0010g0333 a0004c0006t0010g0334 a0004c0006t0010g0335 others(8): Show |
12 | 356 | 0.0337 | -3 | c.473 others(18): Show |
ATG2B | ENSG00000066739.12 | transcript | ENST00000359933.6 | protein_coding | 31/41 | chr14 | TogoVar | |||||||
ATG2B_chr14_96274195_96368341 | 96327230 | CAAT | C | intron_variant | MODIFIER | HG00408.hp1 HG00438.hp2 HG00558.hp2 others(86): Show |
a0001a0002a0003others(6): Show | a0001c0002a0001c0005a0001c0012others(11): Show | a0001c0002t0001a0001c0005t0005a0001c0005t0007others(25): Show | a0001c0002t0001g0321 a0001c0002t0001g0323 a0001c0005t0005g0022 others(83): Show |
89 | 356 | 0.2500 | -3 | c.216 others(22): Show |
ATG2B | ENSG00000066739.12 | transcript | ENST00000359933.6 | protein_coding | 14/41 | chr14 | TogoVar | |||||||
ATG2B_chr14_96274195_96368341 | 96354794 | TTTG | T | intron_variant | MODIFIER | NA18945.hp1 NA18965.hp1 NA18979.hp1 others(4): Show |
a0001 | a0001c0003 | a0001c0003t0003a0001c0003t0027 | a0001c0003t0003g0108 a0001c0003t0003g0201 a0001c0003t0003g0202 others(4): Show |
7 | 356 | 0.0197 | -3 | c.163 others(20): Show |
ATG2B | ENSG00000066739.12 | transcript | ENST00000359933.6 | protein_coding | 1/41 | chr14 | TogoVar | |||||||
ATG2B_chr14_96274195_96368341 | 96356473 | CATA | C | intron_variant | MODIFIER | HG00621.hp1 HG02040.hp1 HG02523.hp2 others(9): Show |
a0004 | a0004c0006a0004c0043 | a0004c0006t0010a0004c0006t0013a0004c0043t0063 | a0004c0006t0010g0333 a0004c0006t0010g0334 a0004c0006t0010g0335 others(8): Show |
12 | 356 | 0.0337 | -3 | c.162 others(20): Show |
ATG2B | ENSG00000066739.12 | transcript | ENST00000359933.6 | protein_coding | 1/41 | chr14 | TogoVar | |||||||
ATG3_chr3_112527510_112566962 | 112527807 | CGGG | C | downstream_gene_variant | MODIFIER | HG00408.hp2 HG00544.hp2 HG00597.hp1 others(101): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0004 | a0001c0001t0001a0001c0001t0003a0001c0001t0006others(2): Show | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 others(64): Show |
104 | 376 | 0.2766 | -3 | c.*48 others(14): Show |
ATG3 | ENSG00000144848.11 | transcript | ENST00000283290.10 | protein_coding | 4702 | chr3 | TogoVar | |||||||
ATG3_chr3_112527510_112566962 | 112528869 | GGAT | G | downstream_gene_variant | MODIFIER | HG01069.hp2 HG01071.hp1 HG01167.hp2 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0007 a0001c0001t0001g0048 a0001c0001t0001g0049 others(2): Show |
8 | 376 | 0.0213 | -3 | c.*38 others(14): Show |
ATG3 | ENSG00000144848.11 | transcript | ENST00000283290.10 | protein_coding | 3640 | chr3 | TogoVar | |||||||
ATG3_chr3_112527510_112566962 | 112530410 | AAAG | A | downstream_gene_variant | MODIFIER | HG00280.hp1 HG01069.hp2 HG01071.hp1 others(16): Show |
a0001a0004 | a0001c0001a0004c0003 | a0001c0001t0001a0004c0003t0001 | a0001c0001t0001g0007 a0001c0001t0001g0010 a0001c0001t0001g0028 others(5): Show |
19 | 376 | 0.0505 | -3 | c.*22 others(14): Show |
ATG3 | ENSG00000144848.11 | transcript | ENST00000283290.10 | protein_coding | 2099 | chr3 | TogoVar | |||||||
ATG3_chr3_112527510_112566962 | 112531600 | AAAC | A | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00280.hp2 others(231): Show |
a0001a0002a0003 | a0001c0001a0002c0004a0003c0005 | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(4): Show | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 others(134): Show |
234 | 376 | 0.6223 | -3 | c.*10 others(14): Show |
ATG3 | ENSG00000144848.11 | transcript | ENST00000283290.10 | protein_coding | 909 | chr3 | TogoVar | |||||||
ATG3_chr3_112527510_112566962 | 112534386 | AAAG | A | intron_variant | MODIFIER | HG01167.hp1 HG01993.hp2 HG03704.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0019 | 3 | 376 | 0.0080 | -3 | c.795 others(16): Show |
ATG3 | ENSG00000144848.11 | transcript | ENST00000283290.10 | protein_coding | 10/11 | chr3 | TogoVar | |||||||
ATG3_chr3_112527510_112566962 | 112549798 | CAAA | C | intron_variant | MODIFIER | HG00280.hp1 HG01069.hp2 HG01071.hp1 others(31): Show |
a0001a0004 | a0001c0001a0004c0003 | a0001c0001t0001a0004c0003t0001 | a0001c0001t0001g0007 a0001c0001t0001g0010 a0001c0001t0001g0028 others(19): Show |
34 | 376 | 0.0904 | -3 | c.235 others(18): Show |
ATG3 | ENSG00000144848.11 | transcript | ENST00000283290.10 | protein_coding | 4/11 | chr3 | TogoVar | |||||||
ATG3_chr3_112527510_112566962 | 112551660 | TGAA | T | intron_variant | MODIFIER | HG00280.hp1 HG01069.hp2 HG01071.hp1 others(33): Show |
a0001a0004 | a0001c0001a0004c0003 | a0001c0001t0001a0004c0003t0001 | a0001c0001t0001g0007 a0001c0001t0001g0010 a0001c0001t0001g0028 others(21): Show |
36 | 376 | 0.0957 | -3 | c.165 others(20): Show |
ATG3 | ENSG00000144848.11 | transcript | ENST00000283290.10 | protein_coding | 3/11 | chr3 | TogoVar | |||||||
ATG3_chr3_112527510_112566962 | 112566154 | TAAC | T | upstream_gene_variant | MODIFIER | HG02486.hp1 HG02723.hp1 HG03130.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0055 others(2): Show |
5 | 376 | 0.0133 | -3 | c.-46 others(14): Show |
ATG3 | ENSG00000144848.11 | transcript | ENST00000283290.10 | protein_coding | 4193 | chr3 | TogoVar | |||||||
ATG4A_chrX_108086778_108159671 | 108090950 | TACC | T | upstream_gene_variant | MODIFIER | HG00558.hp1 HG01081.hp2 HG01109.hp1 others(22): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003 | a0001c0001t0001g0183 a0001c0001t0002g0017 a0001c0001t0002g0018 others(20): Show |
25 | 249 | 0.1004 | -3 | c.-87 others(12): Show |
ATG4A | ENSG00000101844.18 | transcript | ENST00000372232.8 | protein_coding | 827 | chrX | TogoVar | |||||||
ATG4A_chrX_108086778_108159671 | 108148019 | AAAT | A | intron_variant | MODIFIER | HG03710.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0053 | 1 | 249 | 0.0040 | -3 | c.815 others(20): Show |
ATG4A | ENSG00000101844.18 | transcript | ENST00000372232.8 | protein_coding | 9/12 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
ATG4B_chr2_241632693_241678857 | 241642830 | CTAA | C | intron_variant | MODIFIER | HG00099.hp1 HG00408.hp1 HG00438.hp2 others(85): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0013a0002c0003others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(11): Show | a0001c0001t0001g0032 a0001c0001t0001g0247 a0001c0001t0001g0254 others(78): Show |
88 | 410 | 0.2146 | -3 | c.10+ others(18): Show |
ATG4B | ENSG00000168397.17 | transcript | ENST00000404914.8 | protein_coding | 1/12 | chr2 | TogoVar | |||||||
ATG4B_chr2_241632693_241678857 | 241647270 | CATG | C | intron_variant | MODIFIER | HG00423.hp1 HG00544.hp1 HG00642.hp1 others(46): Show |
a0001a0009a0010 | a0001c0001a0001c0002a0009c0015others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(7): Show | a0001c0001t0001g0003 a0001c0001t0001g0013 a0001c0001t0001g0035 others(39): Show |
49 | 410 | 0.1195 | -3 | c.11- others(18): Show |
ATG4B | ENSG00000168397.17 | transcript | ENST00000404914.8 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
ATG4B_chr2_241632693_241678857 | 241654009 | AAAG | A | intron_variant | MODIFIER | HG00423.hp1 HG00544.hp1 HG00642.hp2 others(28): Show |
a0001a0009 | a0001c0001a0001c0002a0009c0015 | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(5): Show | a0001c0001t0001g0003 a0001c0001t0001g0013 a0001c0001t0001g0037 others(23): Show |
31 | 410 | 0.0756 | -3 | c.283 others(18): Show |
ATG4B | ENSG00000168397.17 | transcript | ENST00000404914.8 | protein_coding | 4/12 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
ATG4B_chr2_241632693_241678857 | 241654419 | TAAA | T | intron_variant | MODIFIER | HG01099.hp1 HG01515.hp1 HG01884.hp2 others(18): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0002c0003others(2): Show | a0001c0001t0006a0001c0001t0009a0001c0002t0003others(4): Show | a0001c0001t0006g0345 a0001c0001t0006g0346 a0001c0001t0006g0347 others(16): Show |
21 | 410 | 0.0512 | -3 | c.284 others(18): Show |
ATG4B | ENSG00000168397.17 | transcript | ENST00000404914.8 | protein_coding | 4/12 | INFO_REALIGN_3_PRIME | chr2 | TogoVar |