view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BPTF_chr17_67820503_67989378 | 67909278 | CCTT | C | intron_variant | MODIFIER | HG01069.hp2 HG01071.hp2 HG01099.hp2 others(33): Show |
a0001a0003a0008others(1): Show | a0001c0003a0001c0005a0003c0004others(4): Show | a0001c0003t0002a0001c0003t0003a0001c0005t0005others(5): Show | a0001c0003t0002g0087 a0001c0003t0002g0088 a0001c0003t0003g0085 others(33): Show |
36 | 274 | 0.1314 | -3 | c.281 others(20): Show |
BPTF | ENSG00000171634.19 | transcript | ENST00000306378.11 | protein_coding | 9/27 | chr17 | TogoVar | |||||||
BPTF_chr17_67820503_67989378 | 67919173 | AAAT | A | intron_variant | MODIFIER | HG01069.hp2 HG01071.hp2 HG01106.hp1 others(25): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0003a0001c0009others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0003t0003others(5): Show | a0001c0001t0001g0034 a0001c0001t0001g0041 a0001c0001t0001g0042 others(25): Show |
28 | 274 | 0.1022 | -3 | c.542 others(20): Show |
BPTF | ENSG00000171634.19 | transcript | ENST00000306378.11 | protein_coding | 12/27 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
BPTF_chr17_67820503_67989378 | 67921658 | GTTC | G | intron_variant | MODIFIER | HG02965.hp1 NA19240.hp1 |
a0001 | a0001c0003 | a0001c0003t0003 | a0001c0003t0003g0084 a0001c0003t0003g0085 |
2 | 274 | 0.0073 | -3 | c.555 others(22): Show |
BPTF | ENSG00000171634.19 | transcript | ENST00000306378.11 | protein_coding | 13/27 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
BPTF_chr17_67820503_67989378 | 67923471 | CTTT | C | intron_variant | MODIFIER | HG00280.hp2 HG00597.hp1 HG00639.hp1 others(50): Show |
a0001a0002a0003others(6): Show | a0001c0032a0002c0002a0002c0006others(9): Show | a0001c0032t0002a0002c0002t0002a0002c0006t0002others(9): Show | a0001c0032t0002g0007 a0002c0002t0002g0181 a0002c0002t0002g0183 others(50): Show |
53 | 274 | 0.1934 | -3 | c.570 others(20): Show |
BPTF | ENSG00000171634.19 | transcript | ENST00000306378.11 | protein_coding | 14/27 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
BPTF_chr17_67820503_67989378 | 67925051 | GTTT | G | intron_variant | MODIFIER | HG01069.hp2 HG01071.hp2 HG01099.hp2 others(27): Show |
a0001a0003a0008 | a0001c0003a0001c0009a0003c0004others(3): Show | a0001c0003t0002a0001c0003t0003a0001c0009t0003others(4): Show | a0001c0003t0002g0087 a0001c0003t0002g0088 a0001c0003t0003g0084 others(27): Show |
30 | 274 | 0.1095 | -3 | c.575 others(20): Show |
BPTF | ENSG00000171634.19 | transcript | ENST00000306378.11 | protein_coding | 15/27 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
BPTF_chr17_67820503_67989378 | 67930115 | CAAA | C | intron_variant | MODIFIER | HG01069.hp2 HG01071.hp2 HG01099.hp2 others(34): Show |
a0001a0003a0008others(1): Show | a0001c0003a0001c0005a0001c0009others(5): Show | a0001c0003t0002a0001c0003t0003a0001c0005t0005others(6): Show | a0001c0003t0002g0087 a0001c0003t0002g0088 a0001c0003t0003g0084 others(34): Show |
37 | 274 | 0.1350 | -3 | c.615 others(20): Show |
BPTF | ENSG00000171634.19 | transcript | ENST00000306378.11 | protein_coding | 17/27 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
BPTF_chr17_67820503_67989378 | 67932959 | TAAA | T | intron_variant | MODIFIER | HG01069.hp2 HG01071.hp2 HG01099.hp2 others(36): Show |
a0001a0003a0008others(1): Show | a0001c0003a0001c0005a0001c0009others(5): Show | a0001c0003t0002a0001c0003t0003a0001c0005t0005others(6): Show | a0001c0003t0002g0087 a0001c0003t0002g0088 a0001c0003t0003g0084 others(36): Show |
39 | 274 | 0.1423 | -3 | c.625 others(20): Show |
BPTF | ENSG00000171634.19 | transcript | ENST00000306378.11 | protein_coding | 18/27 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
BPTF_chr17_67820503_67989378 | 67935999 | CAGA | C | intron_variant | MODIFIER | HG01069.hp2 HG01071.hp2 HG01106.hp1 others(9): Show |
a0003 | a0003c0004 | a0003c0004t0004 | a0003c0004t0004g0165 a0003c0004t0004g0166 a0003c0004t0004g0167 others(9): Show |
12 | 274 | 0.0438 | -3 | c.625 others(22): Show |
BPTF | ENSG00000171634.19 | transcript | ENST00000306378.11 | protein_coding | 18/27 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
BPTF_chr17_67820503_67989378 | 67968054 | TAGG | T | intron_variant | MODIFIER | HG00280.hp2 HG00438.hp2 HG00544.hp2 others(84): Show |
a0001a0002a0007others(3): Show | a0001c0001a0002c0002a0002c0027others(4): Show | a0001c0001t0002a0002c0002t0002a0002c0002t0007others(5): Show | a0001c0001t0002g0056 a0002c0002t0002g0014 a0002c0002t0002g0015 others(84): Show |
87 | 274 | 0.3175 | -3 | c.853 others(22): Show |
BPTF | ENSG00000171634.19 | transcript | ENST00000306378.11 | protein_coding | 26/27 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
BPTF_chr17_67820503_67989378 | 67969559 | ATCT | A | intron_variant | MODIFIER | HG00280.hp1 HG00280.hp2 HG00438.hp1 others(230): Show |
a0001a0002a0004others(8): Show | a0001c0001a0001c0013a0001c0015others(20): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(24): Show | a0001c0001t0001g0003 a0001c0001t0001g0016 a0001c0001t0001g0017 others(230): Show |
233 | 274 | 0.8504 | -3 | c.853 others(22): Show |
BPTF | ENSG00000171634.19 | transcript | ENST00000306378.11 | protein_coding | 26/27 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
BPTF_chr17_67820503_67989378 | 67983656 | TGTG | T | 3_prime_UTR_variant | MODIFIER | HG01069.hp2 HG01071.hp2 HG01106.hp1 others(9): Show |
a0003 | a0003c0004 | a0003c0004t0004 | a0003c0004t0004g0165 a0003c0004t0004g0166 a0003c0004t0004g0167 others(9): Show |
12 | 274 | 0.0438 | -3 | c.*13 others(14): Show |
BPTF | ENSG00000171634.19 | transcript | ENST00000306378.11 | protein_coding | 28/28 | 1371 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
BPY2_chrY_22979263_23010465 | 22994616 | ATGT | A | intron_variant | MODIFIER | HG02071.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0026 | 1 | 52 | 0.0192 | -3 | c.196 others(16): Show |
BPY2 | ENSG00000183753.10 | transcript | ENST00000331070.8 | protein_coding | 5/8 | INFO_REALIGN_3_PRIME | chrY | TogoVar | ||||||
BPY2_chrY_22979263_23010465 | 23009962 | CATG | C | downstream_gene_variant | MODIFIER | HG01106.hp1 HG03098.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0022 a0001c0001t0001g0028 |
2 | 52 | 0.0385 | -3 | c.*50 others(14): Show |
BPY2 | ENSG00000183753.10 | transcript | ENST00000331070.8 | protein_coding | 4498 | chrY | TogoVar | |||||||
BRAF_chr7_140714337_140929929 | 140761929 | CAAT | C | intron_variant | MODIFIER | HG02970.hp2 NA19030.hp2 |
a0001 | a0001c0004 | a0001c0004t0009 | a0001c0004t0009g0128 a0001c0004t0009g0129 |
2 | 190 | 0.0105 | -3 | c.181 others(22): Show |
BRAF | ENSG00000157764.14 | transcript | ENST00000644969.2 | protein_coding | 14/19 | chr7 | TogoVar | |||||||
BRAF_chr7_140714337_140929929 | 140766434 | TATA | T | intron_variant | MODIFIER | HG00609.hp1 HG01074.hp1 HG01175.hp1 others(27): Show |
a0001 | a0001c0001a0001c0003a0001c0006 | a0001c0001t0001a0001c0001t0002a0001c0001t0011others(3): Show | a0001c0001t0001g0093 a0001c0001t0002g0087 a0001c0001t0002g0088 others(27): Show |
30 | 190 | 0.1579 | -3 | c.181 others(24): Show |
BRAF | ENSG00000157764.14 | transcript | ENST00000644969.2 | protein_coding | 14/19 | chr7 | TogoVar | |||||||
BRAF_chr7_140714337_140929929 | 140772272 | TACA | T | intron_variant | MODIFIER | HG00408.hp1 HG00558.hp1 HG03942.hp2 others(11): Show |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0010a0001c0001t0030others(1): Show | a0001c0001t0004g0159 a0001c0001t0004g0161 a0001c0001t0004g0164 others(11): Show |
14 | 190 | 0.0737 | -3 | c.181 others(22): Show |
BRAF | ENSG00000157764.14 | transcript | ENST00000644969.2 | protein_coding | 14/19 | chr7 | TogoVar | |||||||
BRAF_chr7_140714337_140929929 | 140860479 | AAAG | A | intron_variant | MODIFIER | HG01074.hp1 HG02055.hp1 HG02976.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0005a0001c0001t0007others(1): Show | a0001c0001t0002g0087 a0001c0001t0005g0189 a0001c0001t0007g0132 others(2): Show |
5 | 190 | 0.0263 | -3 | c.139 others(22): Show |
BRAF | ENSG00000157764.14 | transcript | ENST00000644969.2 | protein_coding | 1/19 | chr7 | TogoVar | |||||||
BRAF_chr7_140714337_140929929 | 140877293 | TGGG | T | intron_variant | MODIFIER | HG00099.hp2 HG00408.hp1 HG00558.hp1 others(16): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004a0001c0001t0010others(3): Show | a0001c0001t0001g0174 a0001c0001t0004g0159 a0001c0001t0004g0161 others(16): Show |
19 | 190 | 0.1000 | -3 | c.139 others(22): Show |
BRAF | ENSG00000157764.14 | transcript | ENST00000644969.2 | protein_coding | 1/19 | chr7 | TogoVar | |||||||
BRAF_chr7_140714337_140929929 | 140878562 | CAGT | C | intron_variant | MODIFIER | HG01261.hp1 HG01884.hp1 HG01952.hp2 others(27): Show |
a0001a0003 | a0001c0001a0001c0002a0001c0004others(1): Show | a0001c0001t0001a0001c0001t0006a0001c0001t0014others(4): Show | a0001c0001t0001g0111 a0001c0001t0001g0116 a0001c0001t0001g0117 others(27): Show |
30 | 190 | 0.1579 | -3 | c.139 others(22): Show |
BRAF | ENSG00000157764.14 | transcript | ENST00000644969.2 | protein_coding | 1/19 | chr7 | TogoVar | |||||||
BRAF_chr7_140714337_140929929 | 140884841 | CAAG | C | intron_variant | MODIFIER | HG03486.hp2 NA21309.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0131 a0001c0001t0001g0145 |
2 | 190 | 0.0105 | -3 | c.139 others(22): Show |
BRAF | ENSG00000157764.14 | transcript | ENST00000644969.2 | protein_coding | 1/19 | chr7 | TogoVar | |||||||
BRAF_chr7_140714337_140929929 | 140906087 | CAAA | C | intron_variant | MODIFIER | HG02280.hp2 HG02572.hp1 HG02970.hp2 others(2): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0009a0001c0001t0016a0001c0004t0009 | a0001c0001t0009g0115 a0001c0001t0009g0150 a0001c0001t0016g0151 others(2): Show |
5 | 190 | 0.0263 | -3 | c.138 others(22): Show |
BRAF | ENSG00000157764.14 | transcript | ENST00000644969.2 | protein_coding | 1/19 | chr7 | TogoVar | |||||||
BRAF_chr7_140714337_140929929 | 140909809 | AAAC | A | intron_variant | MODIFIER | HG01261.hp1 HG01884.hp1 HG01952.hp2 others(29): Show |
a0001a0003 | a0001c0001a0001c0002a0003c0007 | a0001c0001t0001a0001c0001t0006a0001c0001t0007others(7): Show | a0001c0001t0001g0111 a0001c0001t0001g0116 a0001c0001t0001g0117 others(29): Show |
32 | 190 | 0.1684 | -3 | c.138 others(22): Show |
BRAF | ENSG00000157764.14 | transcript | ENST00000644969.2 | protein_coding | 1/19 | chr7 | TogoVar | |||||||
BRAF_chr7_140714337_140929929 | 140915049 | CAAA | C | intron_variant | MODIFIER | HG00099.hp2 HG00408.hp1 HG01123.hp1 others(17): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(5): Show | a0001c0001t0001g0174 a0001c0001t0002g0177 a0001c0001t0002g0178 others(17): Show |
20 | 190 | 0.1053 | -3 | c.138 others(20): Show |
BRAF | ENSG00000157764.14 | transcript | ENST00000644969.2 | protein_coding | 1/19 | chr7 | TogoVar | |||||||
BRAF_chr7_140714337_140929929 | 140919146 | CAAA | C | intron_variant | MODIFIER | HG00609.hp1 HG00642.hp1 HG01074.hp1 others(37): Show |
a0001 | a0001c0001a0001c0003a0001c0006 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(8): Show | a0001c0001t0001g0093 a0001c0001t0002g0087 a0001c0001t0002g0088 others(37): Show |
40 | 190 | 0.2105 | -3 | c.138 others(20): Show |
BRAF | ENSG00000157764.14 | transcript | ENST00000644969.2 | protein_coding | 1/19 | chr7 | TogoVar | |||||||
BRAF_chr7_140725665_140929929 | 140761929 | CAAT | C | intron_variant | MODIFIER | HG02970.hp1 NA19030.hp1 |
a0001 | a0001c0004 | a0001c0004t0045a0001c0004t0046 | a0001c0004t0045g0132 a0001c0004t0046g0133 |
2 | 196 | 0.0102 | -3 | c.169 others(22): Show |
BRAF | ENSG00000157764.14 | transcript | ENST00000646891.2 | protein_coding | 13/17 | chr7 | TogoVar | |||||||
BRAF_chr7_140725665_140929929 | 140766434 | TATA | T | intron_variant | MODIFIER | HG00609.hp2 HG01074.hp2 HG01175.hp1 others(29): Show |
a0001 | a0001c0001a0001c0003a0001c0006 | a0001c0001t0002a0001c0001t0036a0001c0001t0037others(5): Show | a0001c0001t0002g0090 a0001c0001t0002g0091 a0001c0001t0002g0093 others(29): Show |
32 | 196 | 0.1633 | -3 | c.169 others(24): Show |
BRAF | ENSG00000157764.14 | transcript | ENST00000646891.2 | protein_coding | 13/17 | chr7 | TogoVar | |||||||
BRAF_chr7_140725665_140929929 | 140772272 | TACA | T | intron_variant | MODIFIER | HG00408.hp1 HG00558.hp1 HG03942.hp1 others(11): Show |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0009a0001c0001t0034others(4): Show | a0001c0001t0004g0168 a0001c0001t0004g0170 a0001c0001t0004g0171 others(11): Show |
14 | 196 | 0.0714 | -3 | c.169 others(22): Show |
BRAF | ENSG00000157764.14 | transcript | ENST00000646891.2 | protein_coding | 13/17 | chr7 | TogoVar | |||||||
BRAF_chr7_140725665_140929929 | 140860479 | AAAG | A | intron_variant | MODIFIER | HG01074.hp2 HG02055.hp1 HG02976.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0005a0001c0001t0008others(1): Show | a0001c0001t0002g0090 a0001c0001t0002g0163 a0001c0001t0005g0194 others(2): Show |
5 | 196 | 0.0255 | -3 | c.139 others(22): Show |
BRAF | ENSG00000157764.14 | transcript | ENST00000646891.2 | protein_coding | 1/17 | chr7 | TogoVar | |||||||
BRAF_chr7_140725665_140929929 | 140877293 | TGGG | T | intron_variant | MODIFIER | HG00099.hp1 HG00408.hp1 HG00558.hp1 others(16): Show |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0009a0001c0001t0034others(4): Show | a0001c0001t0004g0167 a0001c0001t0004g0168 a0001c0001t0004g0170 others(16): Show |
19 | 196 | 0.0969 | -3 | c.139 others(22): Show |
BRAF | ENSG00000157764.14 | transcript | ENST00000646891.2 | protein_coding | 1/17 | chr7 | TogoVar | |||||||
BRAF_chr7_140725665_140929929 | 140878562 | CAGT | C | intron_variant | MODIFIER | HG01261.hp1 HG01884.hp1 HG01952.hp2 others(27): Show |
a0001a0003 | a0001c0001a0001c0002a0001c0004others(1): Show | a0001c0001t0003a0001c0001t0016a0001c0001t0023others(11): Show | a0001c0001t0003g0116 a0001c0001t0003g0117 a0001c0001t0003g0122 others(27): Show |
30 | 196 | 0.1531 | -3 | c.139 others(22): Show |
BRAF | ENSG00000157764.14 | transcript | ENST00000646891.2 | protein_coding | 1/17 | chr7 | TogoVar | |||||||
BRAF_chr7_140725665_140929929 | 140884841 | CAAG | C | intron_variant | MODIFIER | HG03486.hp2 NA21309.hp2 |
a0001 | a0001c0001 | a0001c0001t0038a0001c0001t0052 | a0001c0001t0038g0135 a0001c0001t0052g0150 |
2 | 196 | 0.0102 | -3 | c.139 others(22): Show |
BRAF | ENSG00000157764.14 | transcript | ENST00000646891.2 | protein_coding | 1/17 | chr7 | TogoVar | |||||||
BRAF_chr7_140725665_140929929 | 140906087 | CAAA | C | intron_variant | MODIFIER | HG02280.hp1 HG02572.hp2 HG02970.hp1 others(2): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0021a0001c0001t0031a0001c0001t0032others(2): Show | a0001c0001t0021g0155 a0001c0001t0031g0156 a0001c0001t0032g0119 others(2): Show |
5 | 196 | 0.0255 | -3 | c.138 others(22): Show |
BRAF | ENSG00000157764.14 | transcript | ENST00000646891.2 | protein_coding | 1/17 | chr7 | TogoVar | |||||||
BRAF_chr7_140725665_140929929 | 140909809 | AAAC | A | intron_variant | MODIFIER | HG01261.hp1 HG01884.hp1 HG01952.hp2 others(29): Show |
a0001a0003 | a0001c0001a0001c0002a0003c0007 | a0001c0001t0003a0001c0001t0008a0001c0001t0016others(12): Show | a0001c0001t0003g0116 a0001c0001t0003g0117 a0001c0001t0003g0122 others(29): Show |
32 | 196 | 0.1633 | -3 | c.138 others(22): Show |
BRAF | ENSG00000157764.14 | transcript | ENST00000646891.2 | protein_coding | 1/17 | chr7 | TogoVar | |||||||
BRAF_chr7_140725665_140929929 | 140915049 | CAAA | C | intron_variant | MODIFIER | HG00099.hp1 HG00408.hp1 HG01123.hp1 others(17): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0004a0001c0001t0009others(5): Show | a0001c0001t0002g0182 a0001c0001t0002g0183 a0001c0001t0004g0167 others(17): Show |
20 | 196 | 0.1020 | -3 | c.138 others(20): Show |
BRAF | ENSG00000157764.14 | transcript | ENST00000646891.2 | protein_coding | 1/17 | chr7 | TogoVar | |||||||
BRAF_chr7_140725665_140929929 | 140919146 | CAAA | C | intron_variant | MODIFIER | HG00609.hp2 HG00642.hp1 HG01074.hp2 others(39): Show |
a0001 | a0001c0001a0001c0003a0001c0006 | a0001c0001t0002a0001c0001t0005a0001c0001t0009others(9): Show | a0001c0001t0002g0090 a0001c0001t0002g0091 a0001c0001t0002g0093 others(39): Show |
42 | 196 | 0.2143 | -3 | c.138 others(20): Show |
BRAF | ENSG00000157764.14 | transcript | ENST00000646891.2 | protein_coding | 1/17 | chr7 | TogoVar | |||||||
BRAP_chr12_111637146_111690956 | 111641405 | GTTT | G | downstream_gene_variant | MODIFIER | HG01943.hp2 HG02257.hp1 HG02717.hp2 others(3): Show |
a0001 | a0001c0003a0001c0004 | a0001c0003t0002a0001c0004t0002 | a0001c0003t0002g0228 a0001c0003t0002g0229 a0001c0003t0002g0232 others(3): Show |
6 | 364 | 0.0165 | -3 | c.*27 others(14): Show |
BRAP | ENSG00000089234.16 | transcript | ENST00000419234.9 | protein_coding | 740 | chr12 | TogoVar | |||||||
BRAP_chr12_111637146_111690956 | 111651225 | TTAA | T | intron_variant | MODIFIER | HG00438.hp1 HG00438.hp2 HG00544.hp2 others(128): Show |
a0001 | a0001c0001a0001c0002a0001c0006 | a0001c0001t0001a0001c0001t0007a0001c0001t0008others(3): Show | a0001c0001t0001g0003 a0001c0001t0001g0013 a0001c0001t0001g0014 others(104): Show |
131 | 364 | 0.3599 | -3 | c.131 others(22): Show |
BRAP | ENSG00000089234.16 | transcript | ENST00000419234.9 | protein_coding | 10/11 | chr12 | TogoVar | |||||||
BRAP_chr12_111637146_111690956 | 111654317 | CTTT | C | intron_variant | MODIFIER | HG01884.hp1 HG02145.hp1 HG02451.hp2 others(7): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0023 a0001c0001t0001g0029 a0001c0001t0001g0030 others(6): Show |
10 | 364 | 0.0275 | -3 | c.131 others(22): Show |
BRAP | ENSG00000089234.16 | transcript | ENST00000419234.9 | protein_coding | 10/11 | chr12 | TogoVar | |||||||
BRAP_chr12_111637146_111690956 | 111660982 | ATTT | A | intron_variant | MODIFIER | HG01943.hp2 HG02257.hp1 HG02717.hp2 others(5): Show |
a0001 | a0001c0003a0001c0004 | a0001c0003t0002a0001c0004t0002 | a0001c0003t0002g0228 a0001c0003t0002g0229 a0001c0003t0002g0230 others(5): Show |
8 | 364 | 0.0220 | -3 | c.897 others(18): Show |
BRAP | ENSG00000089234.16 | transcript | ENST00000419234.9 | protein_coding | 6/11 | chr12 | TogoVar | |||||||
BRAT1_chr7_2532810_2560524 | 2550478 | AAAC | A | intron_variant | MODIFIER | HG00597.hp2 HG00621.hp2 HG01109.hp1 others(67): Show |
a0001a0002a0005others(2): Show | a0001c0001a0001c0002a0002c0004others(3): Show | a0001c0001t0001a0001c0002t0001a0001c0002t0003others(4): Show | a0001c0001t0001g0126 a0001c0002t0001g0024 a0001c0002t0001g0303 others(55): Show |
70 | 424 | 0.1651 | -3 | c.128 others(20): Show |
BRAT1 | ENSG00000106009.16 | transcript | ENST00000340611.9 | protein_coding | 2/13 | chr7 | TogoVar | |||||||
BRAT1_chr7_2532810_2560524 | 2554603 | ACTG | A | intron_variant | MODIFIER | HG00621.hp2 HG02040.hp1 HG02074.hp1 others(5): Show |
a0002 | a0002c0004 | a0002c0004t0001 | a0002c0004t0001g0006 a0002c0004t0001g0371 a0002c0004t0001g0372 others(3): Show |
8 | 424 | 0.0189 | -3 | c.-16 others(18): Show |
BRAT1 | ENSG00000106009.16 | transcript | ENST00000340611.9 | protein_coding | 1/13 | chr7 | TogoVar | |||||||
BRAT1_chr7_2532810_2560524 | 2556079 | TAAA | T | upstream_gene_variant | MODIFIER | HG00741.hp1 HG01074.hp2 HG01167.hp1 others(35): Show |
a0001a0008a0009others(1): Show | a0001c0001a0001c0002a0001c0012others(4): Show | a0001c0001t0001a0001c0002t0001a0001c0002t0003others(5): Show | a0001c0001t0001g0126 a0001c0002t0001g0002 a0001c0002t0001g0010 others(29): Show |
38 | 424 | 0.0896 | -3 | c.-61 others(12): Show |
BRAT1 | ENSG00000106009.16 | transcript | ENST00000340611.9 | protein_coding | 556 | chr7 | TogoVar | |||||||
BRAT1_chr7_2532810_2560524 | 2559765 | TGGG | T | upstream_gene_variant | MODIFIER | HG00558.hp2 HG00735.hp1 HG00738.hp2 others(51): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0003others(6): Show | a0001c0001t0001a0001c0001t0007a0001c0002t0001others(9): Show | a0001c0001t0001g0019 a0001c0001t0001g0033 a0001c0001t0001g0128 others(49): Show |
54 | 424 | 0.1274 | -3 | c.-42 others(14): Show |
BRAT1 | ENSG00000106009.16 | transcript | ENST00000340611.9 | protein_coding | 4242 | chr7 | TogoVar | |||||||
BRCA1_chr17_43039295_43130364 | 43050615 | AAAG | A | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp1 HG00280.hp2 others(105): Show |
a0001a0004a0007others(4): Show | a0001c0001a0001c0022a0001c0024others(6): Show | a0001c0001t0001a0001c0001t0012a0001c0001t0013others(8): Show | a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 others(105): Show |
108 | 276 | 0.3913 | -3 | c.533 others(20): Show |
BRCA1 | ENSG00000012048.25 | transcript | ENST00000357654.9 | protein_coding | 20/22 | chr17 | TogoVar | |||||||
BRCA1_chr17_43039295_43130364 | 43059469 | CACA | C | intron_variant | MODIFIER | HG00438.hp2 HG01346.hp1 HG01433.hp2 others(13): Show |
a0002a0003a0005 | a0002c0002a0002c0005a0003c0003others(1): Show | a0002c0002t0002a0002c0002t0003a0002c0002t0009others(4): Show | a0002c0002t0002g0003 a0002c0002t0002g0006 a0002c0002t0003g0029 others(13): Show |
16 | 276 | 0.0580 | -3 | c.519 others(22): Show |
BRCA1 | ENSG00000012048.25 | transcript | ENST00000357654.9 | protein_coding | 18/22 | chr17 | TogoVar | |||||||
BRCA1_chr17_43039295_43130364 | 43090058 | AAAG | A | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp1 HG00280.hp2 others(109): Show |
a0001a0004a0006others(5): Show | a0001c0001a0001c0022a0001c0024others(8): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0012others(11): Show | a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 others(109): Show |
112 | 276 | 0.4058 | -3 | c.418 others(20): Show |
BRCA1 | ENSG00000012048.25 | transcript | ENST00000357654.9 | protein_coding | 11/22 | chr17 | TogoVar | |||||||
BRCA1_chr17_43039295_43130364 | 43100617 | TAAC | T | intron_variant | MODIFIER | HG00280.hp1 HG00280.hp2 HG00438.hp1 others(59): Show |
a0001a0007a0010 | a0001c0001a0001c0022a0001c0024others(2): Show | a0001c0001t0001a0001c0001t0012a0001c0001t0013others(4): Show | a0001c0001t0001g0172 a0001c0001t0001g0174 a0001c0001t0001g0176 others(59): Show |
62 | 276 | 0.2246 | -3 | c.442 others(18): Show |
BRCA1 | ENSG00000012048.25 | transcript | ENST00000357654.9 | protein_coding | 6/22 | chr17 | TogoVar | |||||||
BRCA1_chr17_43039295_43130364 | 43100629 | ATGT | A | intron_variant | MODIFIER | HG00280.hp1 HG00280.hp2 HG01069.hp1 others(36): Show |
a0001a0007a0010 | a0001c0001a0007c0008a0010c0025 | a0001c0001t0001a0001c0001t0012a0001c0001t0013others(2): Show | a0001c0001t0001g0107 a0001c0001t0001g0172 a0001c0001t0001g0176 others(36): Show |
39 | 276 | 0.1413 | -3 | c.442 others(18): Show |
BRCA1 | ENSG00000012048.25 | transcript | ENST00000357654.9 | protein_coding | 6/22 | chr17 | TogoVar | |||||||
BRCA1_chr17_43039295_43130364 | 43100654 | TAAC | T | intron_variant | MODIFIER | HG00544.hp1 HG01891.hp2 HG02027.hp1 others(15): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0012 | a0001c0001t0001g0104 a0001c0001t0001g0106 a0001c0001t0001g0107 others(15): Show |
18 | 276 | 0.0652 | -3 | c.442 others(18): Show |
BRCA1 | ENSG00000012048.25 | transcript | ENST00000357654.9 | protein_coding | 6/22 | chr17 | TogoVar | |||||||
BRCA1_chr17_43039295_43130364 | 43104083 | AAAG | A | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp1 HG00280.hp2 others(113): Show |
a0001a0002a0004others(6): Show | a0001c0001a0001c0022a0001c0024others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0012others(12): Show | a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 others(113): Show |
116 | 276 | 0.4203 | -3 | c.441 others(16): Show |
BRCA1 | ENSG00000012048.25 | transcript | ENST00000357654.9 | protein_coding | 6/22 | chr17 | TogoVar |