Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	external
ALK_chr2_29187774_29926586	29286928	ATTT ATTT	A A	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG01106.hp1 HG01109.hp2 others(13): Show HG00140.hp2 HG01106.hp1 HG01109.hp2 HG02145.hp1 HG02257.hp1 HG02258.hp1 HG02280.hp1 HG02451.hp1 HG02895.hp2 HG02897.hp1 HG02897.hp2 HG03139.hp2 HG03209.hp1 HG03540.hp2 NA18906.hp1 NA20300.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0006 a0001c0009 a0001c0053 others(12): Show a0001c0006 a0001c0009 a0001c0053 a0002c0001 a0002c0008 a0002c0011 a0002c0014 a0002c0030 a0002c0052 a0002c0056 a0003c0010 a0003c0026 a0003c0034 a0004c0042 a0004c0045	a0001c0006t0007 a0001c0009t0005 a0001c0053t0001 others(12): Show a0001c0006t0007 a0001c0009t0005 a0001c0053t0001 a0002c0001t0001 a0002c0008t0001 a0002c0011t0001 a0002c0014t0001 a0002c0030t0001 a0002c0052t0001 a0002c0056t0001 a0003c0010t0006 a0003c0026t0002 a0003c0034t0002 a0004c0042t0003 a0004c0045t0002	a0001c0006t0007g0056 a0001c0009t0005g0018 a0001c0053t0001g0070 others(13): Show a0001c0006t0007g0056 a0001c0009t0005g0018 a0001c0053t0001g0070 a0002c0001t0001g0061 a0002c0008t0001g0049 a0002c0011t0001g0042 a0002c0014t0001g0009 a0002c0030t0001g0060 a0002c0052t0001g0017 a0002c0056t0001g0040 a0003c0010t0006g0001 a0003c0010t0006g0002 a0003c0026t0002g0015 a0003c0034t0002g0071 a0004c0042t0003g0073 a0004c0045t0002g0043	16	80	0.2000	-3	c.181 others(22): Show c.1817+9957_1817+9959delAAA		ALK	ENSG00000171094.18	transcript	ENST00000389048.8	protein_coding	9/28						chr2	TogoVar
ALK_chr2_29187774_29926586	29288956	AAAT AAAT	A A	intron_variant intron_variant	MODIFIER	HG02071.hp1 HG02572.hp1 HG02738.hp2 others(1): Show HG02071.hp1 HG02572.hp1 HG02738.hp2 NA19043.hp2	a0002 a0003 a0008 a0002 a0003 a0008	a0002c0001 a0003c0012 a0003c0054 others(1): Show a0002c0001 a0003c0012 a0003c0054 a0008c0057	a0002c0001t0001 a0003c0012t0002 a0003c0054t0002 others(1): Show a0002c0001t0001 a0003c0012t0002 a0003c0054t0002 a0008c0057t0002	a0002c0001t0001g0063 a0003c0012t0002g0067 a0003c0054t0002g0069 others(1): Show a0002c0001t0001g0063 a0003c0012t0002g0067 a0003c0054t0002g0069 a0008c0057t0002g0023	4	80	0.0500	-3	c.181 others(22): Show c.1817+7929_1817+7931delATT		ALK	ENSG00000171094.18	transcript	ENST00000389048.8	protein_coding	9/28						chr2	TogoVar
ALK_chr2_29187774_29926586	29313490	TGCC TGCC	T T	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG01074.hp1 HG01884.hp1 others(2): Show HG00140.hp2 HG01074.hp1 HG01884.hp1 HG02258.hp1 HG03041.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0009 a0001c0020 a0002c0014 others(2): Show a0001c0009 a0001c0020 a0002c0014 a0002c0030 a0003c0005	a0001c0009t0005 a0001c0020t0005 a0002c0014t0001 others(2): Show a0001c0009t0005 a0001c0020t0005 a0002c0014t0001 a0002c0030t0001 a0003c0005t0002	a0001c0009t0005g0054 a0001c0020t0005g0005 a0002c0014t0001g0009 others(2): Show a0001c0009t0005g0054 a0001c0020t0005g0005 a0002c0014t0001g0009 a0002c0030t0001g0060 a0003c0005t0002g0032	5	80	0.0625	-3	c.164 others(22): Show c.1647+4811_1647+4813delGGC		ALK	ENSG00000171094.18	transcript	ENST00000389048.8	protein_coding	8/28						chr2	TogoVar
ALK_chr2_29187774_29926586	29347353	TGGA TGGA	T T	intron_variant intron_variant	MODIFIER	HG03139.hp2 NA18906.hp1 HG03139.hp2 NA18906.hp1	a0003 a0003	a0003c0026 a0003c0034 a0003c0026 a0003c0034	a0003c0026t0002 a0003c0034t0002 a0003c0026t0002 a0003c0034t0002	a0003c0026t0002g0015 a0003c0034t0002g0071 a0003c0026t0002g0015 a0003c0034t0002g0071	2	80	0.0250	-3	c.128 others(24): Show c.1283-18875_1283-18873delTCC		ALK	ENSG00000171094.18	transcript	ENST00000389048.8	protein_coding	5/28						chr2	TogoVar
ALK_chr2_29187774_29926586	29351814	GGAA GGAA	G G	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00140.hp2 HG01109.hp1 others(33): Show HG00140.hp1 HG00140.hp2 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01884.hp1 HG01891.hp2 HG02004.hp2 HG02071.hp1 HG02071.hp2 HG02109.hp2 HG02145.hp1 HG02145.hp2 HG02257.hp1 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp2 HG02622.hp2 HG02647.hp2 HG02738.hp1 HG02922.hp1 HG03041.hp2 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03540.hp1 NA18969.hp2 NA19240.hp1 NA20300.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0007	a0001c0004 a0001c0006 a0001c0009 others(27): Show a0001c0004 a0001c0006 a0001c0009 a0001c0016 a0001c0020 a0001c0022 a0001c0023 a0001c0033 a0001c0040 a0001c0050 a0001c0051 a0002c0001 a0002c0008 a0002c0011 a0002c0014 a0002c0018 a0002c0028 a0002c0036 a0002c0052 a0003c0003 a0003c0005 a0003c0012 a0003c0019 a0003c0024 a0003c0031 a0003c0041 a0004c0002 a0004c0032 a0004c0042 a0007c0044	a0001c0004t0008 a0001c0006t0001 a0001c0009t0005 others(27): Show a0001c0004t0008 a0001c0006t0001 a0001c0009t0005 a0001c0016t0007 a0001c0020t0005 a0001c0022t0001 a0001c0023t0010 a0001c0033t0001 a0001c0040t0001 a0001c0050t0014 a0001c0051t0001 a0002c0001t0001 a0002c0008t0001 a0002c0011t0001 a0002c0014t0001 a0002c0018t0001 a0002c0028t0001 a0002c0036t0015 a0002c0052t0001 a0003c0003t0002 a0003c0005t0002 a0003c0012t0002 a0003c0019t0002 a0003c0024t0009 a0003c0031t0002 a0003c0041t0002 a0004c0002t0003 a0004c0032t0003 a0004c0042t0003 a0007c0044t0012	a0001c0004t0008g0003 a0001c0006t0001g0026 a0001c0009t0005g0054 others(33): Show a0001c0004t0008g0003 a0001c0006t0001g0026 a0001c0009t0005g0054 a0001c0016t0007g0004 a0001c0020t0005g0005 a0001c0022t0001g0007 a0001c0023t0010g0076 a0001c0033t0001g0029 a0001c0040t0001g0022 a0001c0050t0014g0078 a0001c0051t0001g0019 a0002c0001t0001g0027 a0002c0001t0001g0061 a0002c0001t0001g0063 a0002c0008t0001g0044 a0002c0008t0001g0049 a0002c0011t0001g0042 a0002c0014t0001g0009 a0002c0018t0001g0008 a0002c0028t0001g0014 a0002c0036t0015g0080 a0002c0052t0001g0017 a0003c0003t0002g0038 a0003c0003t0002g0059 a0003c0005t0002g0045 a0003c0012t0002g0034 a0003c0019t0002g0011 a0003c0024t0009g0075 a0003c0031t0002g0030 a0003c0041t0002g0046 a0004c0002t0003g0025 a0004c0002t0003g0057 a0004c0002t0003g0058 a0004c0032t0003g0052 a0004c0042t0003g0073 a0007c0044t0012g0077	36	80	0.4500	-3	c.128 others(24): Show c.1283-23336_1283-23334delTTC		ALK	ENSG00000171094.18	transcript	ENST00000389048.8	protein_coding	5/28						chr2	TogoVar
ALK_chr2_29187774_29926586	29353003	CCTT CCTT	C C	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00738.hp2 HG01106.hp1 others(6): Show HG00323.hp1 HG00738.hp2 HG01106.hp1 HG01433.hp2 HG02486.hp1 HG03041.hp1 HG03540.hp2 NA18906.hp2 NA20300.hp2	a0001 a0003 a0006 a0001 a0003 a0006	a0001c0004 a0001c0006 a0001c0009 others(6): Show a0001c0004 a0001c0006 a0001c0009 a0001c0017 a0001c0038 a0001c0053 a0001c0058 a0003c0015 a0006c0029	a0001c0004t0001 a0001c0006t0007 a0001c0009t0005 others(6): Show a0001c0004t0001 a0001c0006t0007 a0001c0009t0005 a0001c0017t0001 a0001c0038t0001 a0001c0053t0001 a0001c0058t0001 a0003c0015t0002 a0006c0029t0001	a0001c0004t0001g0021 a0001c0006t0007g0056 a0001c0009t0005g0018 others(6): Show a0001c0004t0001g0021 a0001c0006t0007g0056 a0001c0009t0005g0018 a0001c0017t0001g0012 a0001c0038t0001g0035 a0001c0053t0001g0070 a0001c0058t0001g0024 a0003c0015t0002g0010 a0006c0029t0001g0016	9	80	0.1125	-3	c.128 others(24): Show c.1283-24525_1283-24523delAAG		ALK	ENSG00000171094.18	transcript	ENST00000389048.8	protein_coding	5/28						chr2	TogoVar
ALK_chr2_29187774_29926586	29403709	CAAA CAAA	C C	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00738.hp1 HG01074.hp2 others(5): Show HG00140.hp1 HG00738.hp1 HG01074.hp2 HG01109.hp1 HG01123.hp2 HG01884.hp1 HG02071.hp2 HG03540.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0006 a0001c0020 a0001c0033 others(4): Show a0001c0006 a0001c0020 a0001c0033 a0002c0001 a0002c0049 a0003c0003 a0004c0032	a0001c0006t0001 a0001c0020t0005 a0001c0033t0001 others(4): Show a0001c0006t0001 a0001c0020t0005 a0001c0033t0001 a0002c0001t0001 a0002c0049t0001 a0003c0003t0002 a0004c0032t0003	a0001c0006t0001g0026 a0001c0020t0005g0005 a0001c0033t0001g0029 others(5): Show a0001c0006t0001g0026 a0001c0020t0005g0005 a0001c0033t0001g0029 a0002c0001t0001g0027 a0002c0001t0001g0062 a0002c0049t0001g0072 a0003c0003t0002g0038 a0004c0032t0003g0052	8	80	0.1000	-3	c.115 others(24): Show c.1155-19853_1155-19851delTTT		ALK	ENSG00000171094.18	transcript	ENST00000389048.8	protein_coding	4/28						chr2	TogoVar
ALK_chr2_29187774_29926586	29420156	TAAA TAAA	T T	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00738.hp1 HG02071.hp2 others(3): Show HG00323.hp1 HG00738.hp1 HG02071.hp2 HG02622.hp1 HG02895.hp2 HG03041.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0009 a0002c0001 a0003c0003 others(3): Show a0001c0009 a0002c0001 a0003c0003 a0003c0010 a0003c0015 a0003c0043	a0001c0009t0005 a0002c0001t0001 a0003c0003t0002 others(3): Show a0001c0009t0005 a0002c0001t0001 a0003c0003t0002 a0003c0010t0006 a0003c0015t0002 a0003c0043t0002	a0001c0009t0005g0054 a0002c0001t0001g0062 a0003c0003t0002g0038 others(3): Show a0001c0009t0005g0054 a0002c0001t0001g0062 a0003c0003t0002g0038 a0003c0010t0006g0001 a0003c0015t0002g0010 a0003c0043t0002g0039	6	80	0.0750	-3	c.115 others(24): Show c.1155-36300_1155-36298delTTT		ALK	ENSG00000171094.18	transcript	ENST00000389048.8	protein_coding	4/28						chr2	TogoVar
ALK_chr2_29187774_29926586	29446098	CAAA CAAA	C C	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01891.hp1 HG02486.hp1 others(1): Show HG01109.hp2 HG01891.hp1 HG02486.hp1 HG02572.hp2	a0001 a0004 a0005 a0001 a0004 a0005	a0001c0037 a0001c0038 a0004c0045 others(1): Show a0001c0037 a0001c0038 a0004c0045 a0005c0013	a0001c0037t0005 a0001c0038t0001 a0004c0045t0002 others(1): Show a0001c0037t0005 a0001c0038t0001 a0004c0045t0002 a0005c0013t0004	a0001c0037t0005g0028 a0001c0038t0001g0035 a0004c0045t0002g0043 others(1): Show a0001c0037t0005g0028 a0001c0038t0001g0035 a0004c0045t0002g0043 a0005c0013t0004g0050	4	80	0.0500	-3	c.115 others(24): Show c.1155-62242_1155-62240delTTT		ALK	ENSG00000171094.18	transcript	ENST00000389048.8	protein_coding	4/28						chr2	TogoVar
ALK_chr2_29187774_29926586	29446730	GACC GACC	G G	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG01109.hp2 HG01891.hp1 others(6): Show HG01106.hp1 HG01109.hp2 HG01891.hp1 HG02258.hp2 HG02572.hp2 HG02895.hp2 HG02897.hp1 HG02970.hp2 HG03540.hp2	a0001 a0003 a0004 others(1): Show a0001 a0003 a0004 a0005	a0001c0004 a0001c0006 a0001c0009 others(5): Show a0001c0004 a0001c0006 a0001c0009 a0001c0037 a0001c0053 a0003c0010 a0004c0045 a0005c0013	a0001c0004t0008 a0001c0006t0001 a0001c0009t0005 others(5): Show a0001c0004t0008 a0001c0006t0001 a0001c0009t0005 a0001c0037t0005 a0001c0053t0001 a0003c0010t0006 a0004c0045t0002 a0005c0013t0004	a0001c0004t0008g0003 a0001c0006t0001g0036 a0001c0009t0005g0018 others(6): Show a0001c0004t0008g0003 a0001c0006t0001g0036 a0001c0009t0005g0018 a0001c0037t0005g0028 a0001c0053t0001g0070 a0003c0010t0006g0001 a0003c0010t0006g0002 a0004c0045t0002g0043 a0005c0013t0004g0050	9	80	0.1125	-3	c.115 others(24): Show c.1155-62874_1155-62872delGGT		ALK	ENSG00000171094.18	transcript	ENST00000389048.8	protein_coding	4/28						chr2	TogoVar
ALK_chr2_29187774_29926586	29467242	GAAA GAAA	G G	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01891.hp1 HG02258.hp2 others(2): Show HG01109.hp2 HG01891.hp1 HG02258.hp2 HG02970.hp2 NA19043.hp1	a0001 a0004 a0001 a0004	a0001c0004 a0001c0006 a0001c0037 others(1): Show a0001c0004 a0001c0006 a0001c0037 a0004c0045	a0001c0004t0001 a0001c0004t0008 a0001c0006t0001 others(2): Show a0001c0004t0001 a0001c0004t0008 a0001c0006t0001 a0001c0037t0005 a0004c0045t0002	a0001c0004t0001g0037 a0001c0004t0008g0003 a0001c0006t0001g0036 others(2): Show a0001c0004t0001g0037 a0001c0004t0008g0003 a0001c0006t0001g0036 a0001c0037t0005g0028 a0004c0045t0002g0043	5	80	0.0625	-3	c.115 others(24): Show c.1154+64670_1154+64672delTTT		ALK	ENSG00000171094.18	transcript	ENST00000389048.8	protein_coding	4/28						chr2	TogoVar
ALK_chr2_29187774_29926586	29467915	TTTA TTTA	T T	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG03195.hp1 HG00738.hp2 HG03195.hp1	a0001 a0004 a0001 a0004	a0001c0058 a0004c0002 a0001c0058 a0004c0002	a0001c0058t0001 a0004c0002t0003 a0001c0058t0001 a0004c0002t0003	a0001c0058t0001g0024 a0004c0002t0003g0041 a0001c0058t0001g0024 a0004c0002t0003g0041	2	80	0.0250	-3	c.115 others(24): Show c.1154+63997_1154+63999delTAA		ALK	ENSG00000171094.18	transcript	ENST00000389048.8	protein_coding	4/28						chr2	TogoVar
ALK_chr2_29187774_29926586	29482742	TAAC TAAC	T T	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00323.hp1 HG00323.hp2 others(53): Show HG00140.hp1 HG00323.hp1 HG00323.hp2 HG00738.hp1 HG01106.hp1 HG01106.hp2 HG01123.hp2 HG01433.hp1 HG01884.hp1 HG02004.hp1 HG02004.hp2 HG02055.hp1 HG02055.hp2 HG02071.hp1 HG02071.hp2 HG02109.hp1 HG02109.hp2 HG02145.hp2 HG02258.hp1 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02572.hp1 HG02572.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02647.hp2 HG02738.hp1 HG02738.hp2 HG02895.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02970.hp1 HG03041.hp1 HG03041.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp2 HG03540.hp2 NA18906.hp1 NA18906.hp2 NA18969.hp1 NA18969.hp2 NA19043.hp1 NA19043.hp2 NA19240.hp1 NA19240.hp2 NA20300.hp2	a0001 a0002 a0003 others(4): Show a0001 a0002 a0003 a0004 a0005 a0007 a0008	a0001c0004 a0001c0006 a0001c0009 others(40): Show a0001c0004 a0001c0006 a0001c0009 a0001c0016 a0001c0017 a0001c0020 a0001c0022 a0001c0023 a0001c0025 a0001c0033 a0001c0038 a0001c0040 a0001c0048 a0001c0050 a0001c0053 a0002c0001 a0002c0007 a0002c0008 a0002c0011 a0002c0030 a0002c0036 a0002c0055 a0002c0056 a0003c0003 a0003c0005 a0003c0010 a0003c0012 a0003c0015 a0003c0019 a0003c0024 a0003c0026 a0003c0031 a0003c0034 a0003c0041 a0003c0043 a0003c0054 a0004c0002 a0004c0042 a0005c0013 a0005c0021 a0005c0046 a0007c0044 a0008c0057	a0001c0004t0001 a0001c0006t0001 a0001c0006t0007 others(41): Show a0001c0004t0001 a0001c0006t0001 a0001c0006t0007 a0001c0009t0005 a0001c0016t0007 a0001c0017t0001 a0001c0020t0005 a0001c0022t0001 a0001c0023t0010 a0001c0025t0011 a0001c0033t0001 a0001c0038t0001 a0001c0040t0001 a0001c0048t0001 a0001c0050t0014 a0001c0053t0001 a0002c0001t0001 a0002c0007t0001 a0002c0008t0001 a0002c0011t0001 a0002c0030t0001 a0002c0036t0015 a0002c0055t0001 a0002c0056t0001 a0003c0003t0002 a0003c0005t0002 a0003c0010t0006 a0003c0012t0002 a0003c0015t0002 a0003c0019t0002 a0003c0024t0009 a0003c0026t0002 a0003c0031t0002 a0003c0034t0002 a0003c0041t0002 a0003c0043t0002 a0003c0054t0002 a0004c0002t0003 a0004c0042t0003 a0005c0013t0004 a0005c0021t0004 a0005c0046t0004 a0007c0044t0012 a0008c0057t0002	a0001c0004t0001g0021 a0001c0004t0001g0037 a0001c0006t0001g0026 others(53): Show a0001c0004t0001g0021 a0001c0004t0001g0037 a0001c0006t0001g0026 a0001c0006t0007g0056 a0001c0009t0005g0018 a0001c0009t0005g0054 a0001c0016t0007g0004 a0001c0017t0001g0012 a0001c0020t0005g0005 a0001c0022t0001g0007 a0001c0023t0010g0076 a0001c0025t0011g0074 a0001c0033t0001g0029 a0001c0038t0001g0035 a0001c0040t0001g0022 a0001c0048t0001g0047 a0001c0050t0014g0078 a0001c0053t0001g0070 a0002c0001t0001g0033 a0002c0001t0001g0062 a0002c0001t0001g0063 a0002c0007t0001g0064 a0002c0007t0001g0066 a0002c0008t0001g0044 a0002c0008t0001g0049 a0002c0011t0001g0051 a0002c0030t0001g0060 a0002c0036t0015g0080 a0002c0055t0001g0031 a0002c0056t0001g0040 a0003c0003t0002g0038 a0003c0003t0002g0059 a0003c0003t0002g0065 a0003c0005t0002g0045 a0003c0005t0002g0048 a0003c0010t0006g0001 a0003c0010t0006g0002 a0003c0012t0002g0034 a0003c0012t0002g0067 a0003c0015t0002g0010 a0003c0019t0002g0011 a0003c0024t0009g0075 a0003c0026t0002g0015 a0003c0031t0002g0030 a0003c0034t0002g0071 a0003c0041t0002g0046 a0003c0043t0002g0039 a0003c0054t0002g0069 a0004c0002t0003g0025 a0004c0042t0003g0073 a0005c0013t0004g0020 a0005c0013t0004g0050 a0005c0021t0004g0006 a0005c0046t0004g0053 a0007c0044t0012g0077 a0008c0057t0002g0023	56	80	0.7000	-3	c.115 others(24): Show c.1154+49170_1154+49172delGTT		ALK	ENSG00000171094.18	transcript	ENST00000389048.8	protein_coding	4/28						chr2	TogoVar
ALK_chr2_29187774_29926586	29484877	TTTG TTTG	T T	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01891.hp1 HG02258.hp2 others(1): Show HG01109.hp2 HG01891.hp1 HG02258.hp2 HG02970.hp2	a0001 a0004 a0001 a0004	a0001c0004 a0001c0006 a0001c0037 others(1): Show a0001c0004 a0001c0006 a0001c0037 a0004c0045	a0001c0004t0008 a0001c0006t0001 a0001c0037t0005 others(1): Show a0001c0004t0008 a0001c0006t0001 a0001c0037t0005 a0004c0045t0002	a0001c0004t0008g0003 a0001c0006t0001g0036 a0001c0037t0005g0028 others(1): Show a0001c0004t0008g0003 a0001c0006t0001g0036 a0001c0037t0005g0028 a0004c0045t0002g0043	4	80	0.0500	-3	c.115 others(24): Show c.1154+47035_1154+47037delCAA		ALK	ENSG00000171094.18	transcript	ENST00000389048.8	protein_coding	4/28						chr2	TogoVar
ALK_chr2_29187774_29926586	29500034	ACTC ACTC	A A	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02258.hp1 HG02109.hp2 HG02258.hp1	a0002 a0002	a0002c0030 a0002c0036 a0002c0030 a0002c0036	a0002c0030t0001 a0002c0036t0015 a0002c0030t0001 a0002c0036t0015	a0002c0030t0001g0060 a0002c0036t0015g0080 a0002c0030t0001g0060 a0002c0036t0015g0080	2	80	0.0250	-3	c.115 others(24): Show c.1154+31878_1154+31880delGAG		ALK	ENSG00000171094.18	transcript	ENST00000389048.8	protein_coding	4/28						chr2	TogoVar
ALK_chr2_29187774_29926586	29508733	CAAA CAAA	C C	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02738.hp1 HG03041.hp1 others(1): Show HG02145.hp2 HG02738.hp1 HG03041.hp1 HG03041.hp2	a0001 a0003 a0001 a0003	a0001c0009 a0001c0017 a0001c0022 others(1): Show a0001c0009 a0001c0017 a0001c0022 a0003c0031	a0001c0009t0005 a0001c0017t0001 a0001c0022t0001 others(1): Show a0001c0009t0005 a0001c0017t0001 a0001c0022t0001 a0003c0031t0002	a0001c0009t0005g0054 a0001c0017t0001g0012 a0001c0022t0001g0007 others(1): Show a0001c0009t0005g0054 a0001c0017t0001g0012 a0001c0022t0001g0007 a0003c0031t0002g0030	4	80	0.0500	-3	c.115 others(24): Show c.1154+23179_1154+23181delTTT		ALK	ENSG00000171094.18	transcript	ENST00000389048.8	protein_coding	4/28						chr2	TogoVar
ALK_chr2_29187774_29926586	29517043	ACTT ACTT	A A	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG02145.hp1 HG00140.hp2 HG02145.hp1	a0002 a0002	a0002c0001 a0002c0014 a0002c0001 a0002c0014	a0002c0001t0001 a0002c0014t0001 a0002c0001t0001 a0002c0014t0001	a0002c0001t0001g0061 a0002c0014t0001g0009 a0002c0001t0001g0061 a0002c0014t0001g0009	2	80	0.0250	-3	c.115 others(24): Show c.1154+14869_1154+14871delAAG		ALK	ENSG00000171094.18	transcript	ENST00000389048.8	protein_coding	4/28						chr2	TogoVar
ALK_chr2_29187774_29926586	29525791	CAAA CAAA	C C	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG01074.hp1 HG01074.hp2 others(30): Show HG00323.hp2 HG01074.hp1 HG01074.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp2 HG01123.hp2 HG01433.hp1 HG01884.hp1 HG02071.hp1 HG02071.hp2 HG02258.hp2 HG02280.hp1 HG02572.hp1 HG02622.hp2 HG02647.hp2 HG02738.hp1 HG02738.hp2 HG02895.hp2 HG02897.hp1 HG02922.hp2 HG02970.hp1 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03209.hp2 HG03225.hp2 HG03453.hp1 HG03540.hp1 HG03540.hp2 NA18906.hp1 NA19043.hp1 NA20300.hp2	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0005 a0008	a0001c0004 a0001c0006 a0001c0009 others(24): Show a0001c0004 a0001c0006 a0001c0009 a0001c0020 a0001c0023 a0001c0050 a0001c0053 a0002c0001 a0002c0007 a0002c0011 a0002c0047 a0002c0049 a0002c0055 a0003c0003 a0003c0005 a0003c0010 a0003c0026 a0003c0031 a0003c0034 a0003c0041 a0003c0054 a0004c0002 a0004c0032 a0004c0042 a0004c0045 a0005c0013 a0008c0057	a0001c0004t0001 a0001c0004t0008 a0001c0006t0001 others(26): Show a0001c0004t0001 a0001c0004t0008 a0001c0006t0001 a0001c0006t0007 a0001c0009t0005 a0001c0020t0005 a0001c0023t0010 a0001c0050t0014 a0001c0053t0001 a0002c0001t0001 a0002c0007t0001 a0002c0011t0001 a0002c0047t0001 a0002c0049t0001 a0002c0055t0001 a0003c0003t0002 a0003c0005t0002 a0003c0010t0006 a0003c0026t0002 a0003c0031t0002 a0003c0034t0002 a0003c0041t0002 a0003c0054t0002 a0004c0002t0003 a0004c0032t0003 a0004c0042t0003 a0004c0045t0002 a0005c0013t0004 a0008c0057t0002	a0001c0004t0001g0037 a0001c0004t0008g0003 a0001c0006t0001g0026 others(30): Show a0001c0004t0001g0037 a0001c0004t0008g0003 a0001c0006t0001g0026 a0001c0006t0007g0056 a0001c0009t0005g0018 a0001c0020t0005g0005 a0001c0023t0010g0076 a0001c0050t0014g0078 a0001c0053t0001g0070 a0002c0001t0001g0063 a0002c0007t0001g0066 a0002c0011t0001g0051 a0002c0047t0001g0055 a0002c0049t0001g0072 a0002c0055t0001g0031 a0003c0003t0002g0038 a0003c0003t0002g0065 a0003c0005t0002g0032 a0003c0010t0006g0001 a0003c0010t0006g0002 a0003c0026t0002g0015 a0003c0031t0002g0030 a0003c0034t0002g0071 a0003c0041t0002g0046 a0003c0054t0002g0069 a0004c0002t0003g0025 a0004c0002t0003g0041 a0004c0002t0003g0058 a0004c0032t0003g0052 a0004c0042t0003g0073 a0004c0045t0002g0043 a0005c0013t0004g0020 a0008c0057t0002g0023	33	80	0.4125	-3	c.115 others(22): Show c.1154+6121_1154+6123delTTT		ALK	ENSG00000171094.18	transcript	ENST00000389048.8	protein_coding	4/28						chr2	TogoVar
ALK_chr2_29187774_29926586	29530062	CTTT CTTT	C C	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02647.hp2 HG03041.hp1 others(4): Show HG02145.hp2 HG02647.hp2 HG03041.hp1 HG03139.hp2 NA18906.hp1 NA19043.hp1 NA20300.hp2	a0001 a0003 a0001 a0003	a0001c0004 a0001c0006 a0001c0017 others(4): Show a0001c0004 a0001c0006 a0001c0017 a0001c0022 a0003c0026 a0003c0034 a0003c0041	a0001c0004t0001 a0001c0006t0007 a0001c0017t0001 others(4): Show a0001c0004t0001 a0001c0006t0007 a0001c0017t0001 a0001c0022t0001 a0003c0026t0002 a0003c0034t0002 a0003c0041t0002	a0001c0004t0001g0037 a0001c0006t0007g0056 a0001c0017t0001g0012 others(4): Show a0001c0004t0001g0037 a0001c0006t0007g0056 a0001c0017t0001g0012 a0001c0022t0001g0007 a0003c0026t0002g0015 a0003c0034t0002g0071 a0003c0041t0002g0046	7	80	0.0875	-3	c.115 others(22): Show c.1154+1850_1154+1852delAAA		ALK	ENSG00000171094.18	transcript	ENST00000389048.8	protein_coding	4/28						chr2	TogoVar
ALK_chr2_29187774_29926586	29549030	AAGG AAGG	A A	intron_variant intron_variant	MODIFIER	HG02280.hp1 NA19043.hp1 HG02280.hp1 NA19043.hp1	a0001 a0004 a0001 a0004	a0001c0004 a0004c0042 a0001c0004 a0004c0042	a0001c0004t0001 a0004c0042t0003 a0001c0004t0001 a0004c0042t0003	a0001c0004t0001g0037 a0004c0042t0003g0073 a0001c0004t0001g0037 a0004c0042t0003g0073	2	80	0.0250	-3	c.953 others(22): Show c.953-16917_953-16915delCCT		ALK	ENSG00000171094.18	transcript	ENST00000389048.8	protein_coding	3/28						chr2	TogoVar
ALK_chr2_29187774_29926586	29562375	CACT CACT	C C	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG03453.hp2 HG01891.hp1 HG03453.hp2	a0001 a0001	a0001c0016 a0001c0037 a0001c0016 a0001c0037	a0001c0016t0007 a0001c0037t0005 a0001c0016t0007 a0001c0037t0005	a0001c0016t0007g0004 a0001c0037t0005g0028 a0001c0016t0007g0004 a0001c0037t0005g0028	2	80	0.0250	-3	c.953 others(22): Show c.953-30262_953-30260delAGT		ALK	ENSG00000171094.18	transcript	ENST00000389048.8	protein_coding	3/28						chr2	TogoVar
ALK_chr2_29187774_29926586	29570070	TAAC TAAC	T T	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG03209.hp1 HG02257.hp1 HG03209.hp1	a0002 a0002	a0002c0011 a0002c0052 a0002c0011 a0002c0052	a0002c0011t0001 a0002c0052t0001 a0002c0011t0001 a0002c0052t0001	a0002c0011t0001g0042 a0002c0052t0001g0017 a0002c0011t0001g0042 a0002c0052t0001g0017	2	80	0.0250	-3	c.953 others(22): Show c.953-37957_953-37955delGTT		ALK	ENSG00000171094.18	transcript	ENST00000389048.8	protein_coding	3/28						chr2	TogoVar
ALK_chr2_29187774_29926586	29587436	ACTT ACTT	A A	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00323.hp1 HG01106.hp2 others(13): Show HG00140.hp2 HG00323.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01433.hp1 HG02071.hp2 HG02145.hp1 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02738.hp1 HG02738.hp2 NA18969.hp1 NA19043.hp1 NA19043.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0004 a0002c0001 a0002c0007 others(9): Show a0001c0004 a0002c0001 a0002c0007 a0002c0014 a0002c0030 a0003c0003 a0003c0012 a0003c0015 a0003c0031 a0003c0054 a0004c0042 a0004c0045	a0001c0004t0001 a0001c0004t0008 a0002c0001t0001 others(10): Show a0001c0004t0001 a0001c0004t0008 a0002c0001t0001 a0002c0007t0001 a0002c0014t0001 a0002c0030t0001 a0003c0003t0002 a0003c0012t0002 a0003c0015t0002 a0003c0031t0002 a0003c0054t0002 a0004c0042t0003 a0004c0045t0002	a0001c0004t0001g0037 a0001c0004t0008g0003 a0002c0001t0001g0027 others(13): Show a0001c0004t0001g0037 a0001c0004t0008g0003 a0002c0001t0001g0027 a0002c0001t0001g0061 a0002c0007t0001g0064 a0002c0007t0001g0066 a0002c0014t0001g0009 a0002c0030t0001g0060 a0003c0003t0002g0038 a0003c0003t0002g0065 a0003c0012t0002g0067 a0003c0015t0002g0010 a0003c0031t0002g0030 a0003c0054t0002g0069 a0004c0042t0003g0073 a0004c0045t0002g0043	16	80	0.2000	-3	c.953 others(22): Show c.953-55323_953-55321delAAG		ALK	ENSG00000171094.18	transcript	ENST00000389048.8	protein_coding	3/28						chr2	TogoVar
ALK_chr2_29187774_29926586	29591070	CAAA CAAA	C C	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG02451.hp2 HG02895.hp2 others(2): Show HG00738.hp2 HG02451.hp2 HG02895.hp2 HG02897.hp1 HG03041.hp2	a0001 a0003 a0001 a0003	a0001c0009 a0001c0058 a0003c0010 others(1): Show a0001c0009 a0001c0058 a0003c0010 a0003c0024	a0001c0009t0005 a0001c0058t0001 a0003c0010t0006 others(1): Show a0001c0009t0005 a0001c0058t0001 a0003c0010t0006 a0003c0024t0009	a0001c0009t0005g0054 a0001c0058t0001g0024 a0003c0010t0006g0001 others(2): Show a0001c0009t0005g0054 a0001c0058t0001g0024 a0003c0010t0006g0001 a0003c0010t0006g0002 a0003c0024t0009g0075	5	80	0.0625	-3	c.953 others(22): Show c.953-58957_953-58955delTTT		ALK	ENSG00000171094.18	transcript	ENST00000389048.8	protein_coding	3/28						chr2	TogoVar
ALK_chr2_29187774_29926586	29716994	TCCA TCCA	T T	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00140.hp2 HG00323.hp1 others(38): Show HG00140.hp1 HG00140.hp2 HG00323.hp1 HG00738.hp1 HG01106.hp2 HG01109.hp1 HG01123.hp2 HG01433.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG02004.hp1 HG02004.hp2 HG02055.hp1 HG02055.hp2 HG02071.hp1 HG02071.hp2 HG02109.hp2 HG02145.hp1 HG02257.hp2 HG02258.hp1 HG02622.hp1 HG02738.hp1 HG02738.hp2 HG02897.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp2 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03540.hp1 NA18906.hp1 NA18906.hp2 NA18969.hp1 NA19043.hp1 NA19240.hp1 NA19240.hp2 NA20300.hp2	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0005 a0007	a0001c0004 a0001c0006 a0001c0016 others(27): Show a0001c0004 a0001c0006 a0001c0016 a0001c0023 a0001c0025 a0001c0027 a0001c0033 a0001c0035 a0001c0037 a0001c0040 a0002c0001 a0002c0007 a0002c0014 a0002c0028 a0002c0030 a0002c0036 a0002c0047 a0002c0056 a0003c0003 a0003c0015 a0003c0026 a0003c0031 a0003c0034 a0003c0043 a0003c0054 a0004c0002 a0004c0032 a0005c0021 a0005c0046 a0007c0044	a0001c0004t0001 a0001c0006t0001 a0001c0006t0007 others(28): Show a0001c0004t0001 a0001c0006t0001 a0001c0006t0007 a0001c0016t0007 a0001c0023t0010 a0001c0025t0011 a0001c0027t0001 a0001c0033t0001 a0001c0035t0001 a0001c0037t0005 a0001c0040t0001 a0002c0001t0001 a0002c0007t0001 a0002c0014t0001 a0002c0028t0001 a0002c0030t0001 a0002c0036t0015 a0002c0047t0001 a0002c0056t0001 a0003c0003t0002 a0003c0015t0002 a0003c0026t0002 a0003c0031t0002 a0003c0034t0002 a0003c0043t0002 a0003c0054t0002 a0004c0002t0003 a0004c0032t0003 a0005c0021t0004 a0005c0046t0004 a0007c0044t0012	a0001c0004t0001g0021 a0001c0004t0001g0037 a0001c0006t0001g0026 others(38): Show a0001c0004t0001g0021 a0001c0004t0001g0037 a0001c0006t0001g0026 a0001c0006t0007g0056 a0001c0016t0007g0004 a0001c0023t0010g0076 a0001c0025t0011g0074 a0001c0027t0001g0013 a0001c0033t0001g0029 a0001c0035t0001g0068 a0001c0037t0005g0028 a0001c0040t0001g0022 a0002c0001t0001g0027 a0002c0001t0001g0033 a0002c0001t0001g0061 a0002c0001t0001g0062 a0002c0001t0001g0063 a0002c0007t0001g0064 a0002c0007t0001g0066 a0002c0014t0001g0009 a0002c0028t0001g0014 a0002c0030t0001g0060 a0002c0036t0015g0080 a0002c0047t0001g0055 a0002c0056t0001g0040 a0003c0003t0002g0038 a0003c0003t0002g0059 a0003c0003t0002g0065 a0003c0015t0002g0010 a0003c0026t0002g0015 a0003c0031t0002g0030 a0003c0034t0002g0071 a0003c0043t0002g0039 a0003c0054t0002g0069 a0004c0002t0003g0025 a0004c0002t0003g0041 a0004c0002t0003g0058 a0004c0032t0003g0052 a0005c0021t0004g0006 a0005c0046t0004g0053 a0007c0044t0012g0077	41	80	0.5125	-3	c.787 others(18): Show c.787+581_787+583delTGG		ALK	ENSG00000171094.18	transcript	ENST00000389048.8	protein_coding	2/28						chr2	TogoVar
ALK_chr2_29187774_29926586	29739240	TAAA TAAA	T T	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG02109.hp1 HG02280.hp2 others(5): Show HG00323.hp1 HG02109.hp1 HG02280.hp2 HG02897.hp2 HG02922.hp1 HG03195.hp1 HG03225.hp1 NA19240.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0007	a0001c0048 a0002c0008 a0002c0056 others(5): Show a0001c0048 a0002c0008 a0002c0056 a0003c0005 a0003c0015 a0003c0019 a0004c0002 a0007c0044	a0001c0048t0001 a0002c0008t0001 a0002c0056t0001 others(5): Show a0001c0048t0001 a0002c0008t0001 a0002c0056t0001 a0003c0005t0002 a0003c0015t0002 a0003c0019t0002 a0004c0002t0003 a0007c0044t0012	a0001c0048t0001g0047 a0002c0008t0001g0044 a0002c0056t0001g0040 others(5): Show a0001c0048t0001g0047 a0002c0008t0001g0044 a0002c0056t0001g0040 a0003c0005t0002g0045 a0003c0015t0002g0010 a0003c0019t0002g0011 a0004c0002t0003g0041 a0007c0044t0012g0077	8	80	0.1000	-3	c.668 others(22): Show c.668-21546_668-21544delTTT		ALK	ENSG00000171094.18	transcript	ENST00000389048.8	protein_coding	1/28						chr2	TogoVar
ALK_chr2_29187774_29926586	29761844	TAGA TAGA	T T	intron_variant intron_variant	MODIFIER	HG00738.hp2 NA19043.hp1 HG00738.hp2 NA19043.hp1	a0001 a0001	a0001c0004 a0001c0058 a0001c0004 a0001c0058	a0001c0004t0001 a0001c0058t0001 a0001c0004t0001 a0001c0058t0001	a0001c0004t0001g0037 a0001c0058t0001g0024 a0001c0004t0001g0037 a0001c0058t0001g0024	2	80	0.0250	-3	c.668 others(22): Show c.668-44150_668-44148delTCT		ALK	ENSG00000171094.18	transcript	ENST00000389048.8	protein_coding	1/28						chr2	TogoVar
ALK_chr2_29187774_29926586	29784713	AAAC AAAC	A A	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG03453.hp2 HG02622.hp2 HG03453.hp2	a0001 a0001	a0001c0016 a0001c0050 a0001c0016 a0001c0050	a0001c0016t0007 a0001c0050t0014 a0001c0016t0007 a0001c0050t0014	a0001c0016t0007g0004 a0001c0050t0014g0078 a0001c0016t0007g0004 a0001c0050t0014g0078	2	80	0.0250	-3	c.668 others(22): Show c.668-67019_668-67017delGTT		ALK	ENSG00000171094.18	transcript	ENST00000389048.8	protein_coding	1/28						chr2	TogoVar
ALK_chr2_29187774_29926586	29814834	ATTG ATTG	A A	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG01109.hp2 HG02258.hp1 others(3): Show HG00738.hp1 HG01109.hp2 HG02258.hp1 HG02451.hp1 HG02738.hp2 HG03195.hp1	a0002 a0003 a0004 a0002 a0003 a0004	a0002c0001 a0002c0008 a0002c0030 others(3): Show a0002c0001 a0002c0008 a0002c0030 a0003c0054 a0004c0002 a0004c0045	a0002c0001t0001 a0002c0008t0001 a0002c0030t0001 others(3): Show a0002c0001t0001 a0002c0008t0001 a0002c0030t0001 a0003c0054t0002 a0004c0002t0003 a0004c0045t0002	a0002c0001t0001g0062 a0002c0008t0001g0049 a0002c0030t0001g0060 others(3): Show a0002c0001t0001g0062 a0002c0008t0001g0049 a0002c0030t0001g0060 a0003c0054t0002g0069 a0004c0002t0003g0041 a0004c0045t0002g0043	6	80	0.0750	-3	c.668 others(22): Show c.668-97140_668-97138delCAA		ALK	ENSG00000171094.18	transcript	ENST00000389048.8	protein_coding	1/28						chr2	TogoVar
ALK_chr2_29187774_29926586	29830955	AAAG AAAG	A A	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02258.hp2 HG02486.hp1 others(2): Show HG02109.hp2 HG02258.hp2 HG02486.hp1 HG02970.hp2 HG03453.hp2	a0001 a0002 a0001 a0002	a0001c0004 a0001c0006 a0001c0016 others(2): Show a0001c0004 a0001c0006 a0001c0016 a0001c0038 a0002c0036	a0001c0004t0008 a0001c0006t0001 a0001c0016t0007 others(2): Show a0001c0004t0008 a0001c0006t0001 a0001c0016t0007 a0001c0038t0001 a0002c0036t0015	a0001c0004t0008g0003 a0001c0006t0001g0036 a0001c0016t0007g0004 others(2): Show a0001c0004t0008g0003 a0001c0006t0001g0036 a0001c0016t0007g0004 a0001c0038t0001g0035 a0002c0036t0015g0080	5	80	0.0625	-3	c.667 others(22): Show c.667+89035_667+89037delCTT		ALK	ENSG00000171094.18	transcript	ENST00000389048.8	protein_coding	1/28						chr2	TogoVar
ALK_chr2_29187774_29926586	29831059	AGGG AGGG	A A	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00738.hp1 HG01074.hp2 others(14): Show HG00323.hp2 HG00738.hp1 HG01074.hp2 HG01433.hp2 HG01891.hp1 HG02145.hp1 HG02257.hp2 HG02258.hp1 HG02486.hp2 HG02622.hp2 HG02922.hp1 HG03041.hp1 HG03041.hp2 HG03139.hp1 HG03540.hp2 NA18969.hp2 NA19240.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0006 a0007	a0001c0009 a0001c0017 a0001c0023 others(12): Show a0001c0009 a0001c0017 a0001c0023 a0001c0035 a0001c0037 a0001c0050 a0001c0051 a0002c0001 a0002c0030 a0002c0049 a0002c0055 a0003c0012 a0003c0019 a0006c0029 a0007c0044	a0001c0009t0005 a0001c0017t0001 a0001c0023t0010 others(12): Show a0001c0009t0005 a0001c0017t0001 a0001c0023t0010 a0001c0035t0001 a0001c0037t0005 a0001c0050t0014 a0001c0051t0001 a0002c0001t0001 a0002c0030t0001 a0002c0049t0001 a0002c0055t0001 a0003c0012t0002 a0003c0019t0002 a0006c0029t0001 a0007c0044t0012	a0001c0009t0005g0018 a0001c0009t0005g0054 a0001c0017t0001g0012 others(14): Show a0001c0009t0005g0018 a0001c0009t0005g0054 a0001c0017t0001g0012 a0001c0023t0010g0076 a0001c0035t0001g0068 a0001c0037t0005g0028 a0001c0050t0014g0078 a0001c0051t0001g0019 a0002c0001t0001g0061 a0002c0001t0001g0062 a0002c0030t0001g0060 a0002c0049t0001g0072 a0002c0055t0001g0031 a0003c0012t0002g0034 a0003c0019t0002g0011 a0006c0029t0001g0016 a0007c0044t0012g0077	17	80	0.2125	-3	c.667 others(22): Show c.667+88931_667+88933delCCC		ALK	ENSG00000171094.18	transcript	ENST00000389048.8	protein_coding	1/28						chr2	TogoVar
ALK_chr2_29187774_29926586	29831070	GGGA GGGA	G G	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01109.hp2 HG02055.hp1 others(6): Show HG01109.hp1 HG01109.hp2 HG02055.hp1 HG02109.hp2 HG02622.hp1 HG03209.hp2 HG03453.hp2 NA19043.hp2 NA20300.hp2	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0005	a0001c0006 a0001c0016 a0002c0001 others(6): Show a0001c0006 a0001c0016 a0002c0001 a0002c0036 a0002c0047 a0003c0012 a0003c0043 a0004c0045 a0005c0021	a0001c0006t0007 a0001c0016t0007 a0002c0001t0001 others(6): Show a0001c0006t0007 a0001c0016t0007 a0002c0001t0001 a0002c0036t0015 a0002c0047t0001 a0003c0012t0002 a0003c0043t0002 a0004c0045t0002 a0005c0021t0004	a0001c0006t0007g0056 a0001c0016t0007g0004 a0002c0001t0001g0027 others(6): Show a0001c0006t0007g0056 a0001c0016t0007g0004 a0002c0001t0001g0027 a0002c0036t0015g0080 a0002c0047t0001g0055 a0003c0012t0002g0067 a0003c0043t0002g0039 a0004c0045t0002g0043 a0005c0021t0004g0006	9	80	0.1125	-3	c.667 others(22): Show c.667+88920_667+88922delTCC		ALK	ENSG00000171094.18	transcript	ENST00000389048.8	protein_coding	1/28						chr2	TogoVar
ALK_chr2_29187774_29926586	29831108	GAGA GAGA	G G	intron_variant intron_variant	MODIFIER	HG03195.hp2 NA18906.hp2 HG03195.hp2 NA18906.hp2	a0001 a0001	a0001c0004 a0001c0040 a0001c0004 a0001c0040	a0001c0004t0001 a0001c0040t0001 a0001c0004t0001 a0001c0040t0001	a0001c0004t0001g0021 a0001c0040t0001g0022 a0001c0004t0001g0021 a0001c0040t0001g0022	2	80	0.0250	-3	c.667 others(22): Show c.667+88882_667+88884delTCT		ALK	ENSG00000171094.18	transcript	ENST00000389048.8	protein_coding	1/28						chr2	TogoVar
ALK_chr2_29187774_29926586	29831178	AGGG AGGG	A A	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG02071.hp1 HG02572.hp2 others(1): Show HG00323.hp1 HG02071.hp1 HG02572.hp2 HG03209.hp1	a0002 a0003 a0005 a0002 a0003 a0005	a0002c0001 a0002c0011 a0003c0015 others(1): Show a0002c0001 a0002c0011 a0003c0015 a0005c0013	a0002c0001t0001 a0002c0011t0001 a0003c0015t0002 others(1): Show a0002c0001t0001 a0002c0011t0001 a0003c0015t0002 a0005c0013t0004	a0002c0001t0001g0063 a0002c0011t0001g0042 a0003c0015t0002g0010 others(1): Show a0002c0001t0001g0063 a0002c0011t0001g0042 a0003c0015t0002g0010 a0005c0013t0004g0050	4	80	0.0500	-3	c.667 others(22): Show c.667+88812_667+88814delCCC		ALK	ENSG00000171094.18	transcript	ENST00000389048.8	protein_coding	1/28						chr2	TogoVar
ALK_chr2_29187774_29926586	29831189	AAGG AAGG	A A	intron_variant intron_variant	MODIFIER	HG02895.hp1 HG03453.hp1 HG02895.hp1 HG03453.hp1	a0001 a0004 a0001 a0004	a0001c0039 a0004c0002 a0001c0039 a0004c0002	a0001c0039t0013 a0004c0002t0003 a0001c0039t0013 a0004c0002t0003	a0001c0039t0013g0079 a0004c0002t0003g0058 a0001c0039t0013g0079 a0004c0002t0003g0058	2	80	0.0250	-3	c.667 others(22): Show c.667+88801_667+88803delCCT		ALK	ENSG00000171094.18	transcript	ENST00000389048.8	protein_coding	1/28						chr2	TogoVar
ALK_chr2_29187774_29926586	29831232	AGAG AGAG	A A	intron_variant intron_variant	MODIFIER	HG00738.hp2 NA19240.hp2 HG00738.hp2 NA19240.hp2	a0001 a0005 a0001 a0005	a0001c0058 a0005c0046 a0001c0058 a0005c0046	a0001c0058t0001 a0005c0046t0004 a0001c0058t0001 a0005c0046t0004	a0001c0058t0001g0024 a0005c0046t0004g0053 a0001c0058t0001g0024 a0005c0046t0004g0053	2	80	0.0250	-3	c.667 others(22): Show c.667+88758_667+88760delCTC		ALK	ENSG00000171094.18	transcript	ENST00000389048.8	protein_coding	1/28						chr2	TogoVar
ALK_chr2_29187774_29926586	29831259	GGAA GGAA	G G	intron_variant intron_variant	MODIFIER	HG01123.hp1 HG01884.hp2 HG02895.hp1 others(2): Show HG01123.hp1 HG01884.hp2 HG02895.hp1 HG03453.hp1 HG03453.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0016 a0001c0027 a0001c0039 others(2): Show a0001c0016 a0001c0027 a0001c0039 a0002c0018 a0004c0002	a0001c0016t0007 a0001c0027t0001 a0001c0039t0013 others(2): Show a0001c0016t0007 a0001c0027t0001 a0001c0039t0013 a0002c0018t0001 a0004c0002t0003	a0001c0016t0007g0004 a0001c0027t0001g0013 a0001c0039t0013g0079 others(2): Show a0001c0016t0007g0004 a0001c0027t0001g0013 a0001c0039t0013g0079 a0002c0018t0001g0008 a0004c0002t0003g0058	5	80	0.0625	-3	c.667 others(22): Show c.667+88731_667+88733delTTC		ALK	ENSG00000171094.18	transcript	ENST00000389048.8	protein_coding	1/28						chr2	TogoVar
ALK_chr2_29187774_29926586	29853791	CCCT CCCT	C C	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00738.hp2 HG01123.hp2 others(5): Show HG00323.hp2 HG00738.hp2 HG01123.hp2 HG02145.hp1 HG02257.hp2 HG02451.hp1 HG02647.hp1 HG02922.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0006 a0001c0035 a0001c0058 others(5): Show a0001c0006 a0001c0035 a0001c0058 a0002c0001 a0002c0008 a0002c0011 a0002c0055 a0003c0005	a0001c0006t0001 a0001c0035t0001 a0001c0058t0001 others(5): Show a0001c0006t0001 a0001c0035t0001 a0001c0058t0001 a0002c0001t0001 a0002c0008t0001 a0002c0011t0001 a0002c0055t0001 a0003c0005t0002	a0001c0006t0001g0026 a0001c0035t0001g0068 a0001c0058t0001g0024 others(5): Show a0001c0006t0001g0026 a0001c0035t0001g0068 a0001c0058t0001g0024 a0002c0001t0001g0061 a0002c0008t0001g0049 a0002c0011t0001g0051 a0002c0055t0001g0031 a0003c0005t0002g0048	8	80	0.1000	-3	c.667 others(22): Show c.667+66199_667+66201delAGG		ALK	ENSG00000171094.18	transcript	ENST00000389048.8	protein_coding	1/28						chr2	TogoVar
ALK_chr2_29187774_29926586	29906937	GTTT GTTT	G G	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00738.hp1 HG00738.hp2 others(10): Show HG00140.hp1 HG00738.hp1 HG00738.hp2 HG01109.hp1 HG01123.hp2 HG02004.hp2 HG02071.hp2 HG02145.hp1 HG02145.hp2 HG02257.hp1 HG02486.hp1 HG02622.hp1 HG03225.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0006 a0001c0022 a0001c0033 others(7): Show a0001c0006 a0001c0022 a0001c0033 a0001c0038 a0001c0058 a0002c0001 a0002c0052 a0003c0003 a0003c0043 a0004c0002	a0001c0006t0001 a0001c0022t0001 a0001c0033t0001 others(7): Show a0001c0006t0001 a0001c0022t0001 a0001c0033t0001 a0001c0038t0001 a0001c0058t0001 a0002c0001t0001 a0002c0052t0001 a0003c0003t0002 a0003c0043t0002 a0004c0002t0003	a0001c0006t0001g0026 a0001c0022t0001g0007 a0001c0033t0001g0029 others(10): Show a0001c0006t0001g0026 a0001c0022t0001g0007 a0001c0033t0001g0029 a0001c0038t0001g0035 a0001c0058t0001g0024 a0002c0001t0001g0027 a0002c0001t0001g0061 a0002c0001t0001g0062 a0002c0052t0001g0017 a0003c0003t0002g0038 a0003c0003t0002g0059 a0003c0043t0002g0039 a0004c0002t0003g0025	13	80	0.1625	-3	c.667 others(22): Show c.667+13053_667+13055delAAA		ALK	ENSG00000171094.18	transcript	ENST00000389048.8	protein_coding	1/28						chr2	TogoVar
ALK_chr2_29187774_29926586	29908438	CCTT CCTT	C C	intron_variant intron_variant	MODIFIER	HG01433.hp2 HG03139.hp2 HG01433.hp2 HG03139.hp2	a0003 a0006 a0003 a0006	a0003c0026 a0006c0029 a0003c0026 a0006c0029	a0003c0026t0002 a0006c0029t0001 a0003c0026t0002 a0006c0029t0001	a0003c0026t0002g0015 a0006c0029t0001g0016 a0003c0026t0002g0015 a0006c0029t0001g0016	2	80	0.0250	-3	c.667 others(22): Show c.667+11552_667+11554delAAG		ALK	ENSG00000171094.18	transcript	ENST00000389048.8	protein_coding	1/28						chr2	TogoVar
ALK_chr2_29187774_29926586	29910968	AAAC AAAC	A A	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG01433.hp1 HG01106.hp2 HG01433.hp1	a0002 a0003 a0002 a0003	a0002c0007 a0003c0003 a0002c0007 a0003c0003	a0002c0007t0001 a0003c0003t0002 a0002c0007t0001 a0003c0003t0002	a0002c0007t0001g0066 a0003c0003t0002g0065 a0002c0007t0001g0066 a0003c0003t0002g0065	2	80	0.0250	-3	c.667 others(20): Show c.667+9022_667+9024delGTT		ALK	ENSG00000171094.18	transcript	ENST00000389048.8	protein_coding	1/28						chr2	TogoVar
ALK_chr2_29187774_29926586	29925650	GATA GATA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01433.hp2 HG03139.hp2 HG01433.hp2 HG03139.hp2	a0003 a0006 a0003 a0006	a0003c0026 a0006c0029 a0003c0026 a0006c0029	a0003c0026t0002 a0006c0029t0001 a0003c0026t0002 a0006c0029t0001	a0003c0026t0002g0015 a0006c0029t0001g0016 a0003c0026t0002g0015 a0006c0029t0001g0016	2	80	0.0250	-3	c.-49 others(14): Show c.-4994_-4992delTAT		ALK	ENSG00000171094.18	transcript	ENST00000389048.8	protein_coding					4065		chr2	TogoVar
ALLC_chr2_3653200_3707671	3657641	GTTC GTTC	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01884.hp1 HG02630.hp1 HG02886.hp1 HG01884.hp1 HG02630.hp1 HG02886.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0002c0009 a0001c0001 a0002c0002 a0002c0009	a0001c0001t0001 a0002c0002t0002 a0002c0009t0002 a0001c0001t0001 a0002c0002t0002 a0002c0009t0002	a0001c0001t0001g0015 a0002c0002t0002g0014 a0002c0009t0002g0013 a0001c0001t0001g0015 a0002c0002t0002g0014 a0002c0009t0002g0013	3	274	0.0110	-3	c.-71 others(12): Show c.-715_-713delTTC		ALLC	ENSG00000151360.10	transcript	ENST00000252505.4	protein_coding					558		chr2	TogoVar
ALLC_chr2_3653200_3707671	3668566	CTTT CTTT	C C	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG02257.hp2 HG02280.hp1 others(4): Show HG01243.hp2 HG02257.hp2 HG02280.hp1 HG02809.hp2 HG02922.hp1 NA18906.hp2 NA19240.hp1	a0002 a0003 a0002 a0003	a0002c0013 a0003c0003 a0002c0013 a0003c0003	a0002c0013t0002 a0003c0003t0002 a0002c0013t0002 a0003c0003t0002	a0002c0013t0002g0030 a0003c0003t0002g0021 a0003c0003t0002g0029 others(4): Show a0002c0013t0002g0030 a0003c0003t0002g0021 a0003c0003t0002g0029 a0003c0003t0002g0031 a0003c0003t0002g0177 a0003c0003t0002g0178 a0003c0003t0002g0179	7	274	0.0256	-3	c.-62 others(20): Show c.-62-2505_-62-2503delTTT		ALLC	ENSG00000151360.10	transcript	ENST00000252505.4	protein_coding	1/11					INFO_REALIGN_3_PRIME	chr2	TogoVar
ALLC_chr2_3653200_3707671	3701561	GGAA GGAA	G G	disruptive_inframe_deletion disruptive_inframe_deletion	MODERATE	HG00280.hp1 HG00280.hp2 HG00323.hp2 others(138): Show HG00280.hp1 HG00280.hp2 HG00323.hp2 HG00408.hp2 HG00544.hp1 HG00609.hp1 HG00639.hp1 HG00642.hp1 HG00733.hp2 HG00735.hp2 HG00741.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01081.hp1 HG01081.hp2 HG01106.hp1 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01167.hp2 HG01168.hp2 HG01169.hp1 HG01243.hp2 HG01256.hp2 HG01258.hp2 HG01346.hp1 HG01358.hp1 HG01361.hp2 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp2 HG01891.hp1 HG01891.hp2 HG01934.hp1 HG01975.hp2 HG01978.hp1 HG02004.hp1 HG02015.hp2 HG02040.hp2 HG02055.hp1 HG02056.hp2 HG02071.hp1 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02145.hp2 HG02148.hp2 HG02155.hp2 HG02257.hp2 HG02258.hp1 HG02280.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02523.hp2 HG02559.hp2 HG02630.hp1 HG02647.hp1 HG02647.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02970.hp1 HG03041.hp1 HG03130.hp1 HG03139.hp1 HG03139.hp2 HG03195.hp2 HG03209.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG03490.hp1 HG03492.hp1 HG03540.hp1 HG03579.hp1 HG03579.hp2 HG03669.hp1 HG03688.hp2 HG03704.hp2 HG04199.hp2 HG04228.hp1 HG04228.hp2 NA18522.hp2 NA18906.hp1 NA18906.hp2 NA18942.hp1 NA18943.hp1 NA18944.hp1 NA18945.hp1 NA18952.hp2 NA18960.hp2 NA18963.hp2 NA18965.hp2 NA18969.hp1 NA18979.hp1 NA18983.hp1 NA18983.hp2 NA18989.hp2 NA18995.hp1 NA18999.hp1 NA19007.hp2 NA19030.hp2 NA19043.hp2 NA19054.hp1 NA19063.hp1 NA19063.hp2 NA19065.hp2 NA19066.hp2 NA19072.hp1 NA19074.hp2 NA19082.hp2 NA19083.hp1 NA19083.hp2 NA19088.hp1 NA19088.hp2 NA19240.hp1 NA20300.hp1 NA20752.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0002 a0003 a0005 others(5): Show a0002 a0003 a0005 a0006 a0007 a0008 a0009 a0010	a0002c0002 a0002c0005 a0002c0009 others(10): Show a0002c0002 a0002c0005 a0002c0009 a0002c0013 a0002c0015 a0003c0003 a0003c0010 a0005c0007 a0006c0006 a0007c0008 a0008c0011 a0009c0016 a0010c0014	a0002c0002t0001 a0002c0002t0002 a0002c0005t0001 others(15): Show a0002c0002t0001 a0002c0002t0002 a0002c0005t0001 a0002c0005t0002 a0002c0009t0002 a0002c0013t0002 a0002c0015t0002 a0003c0003t0001 a0003c0003t0002 a0003c0010t0004 a0005c0007t0004 a0006c0006t0001 a0006c0006t0002 a0007c0008t0002 a0007c0008t0003 a0008c0011t0001 a0009c0016t0002 a0010c0014t0002	a0002c0002t0001g0048 a0002c0002t0001g0064 a0002c0002t0001g0065 others(131): Show a0002c0002t0001g0048 a0002c0002t0001g0064 a0002c0002t0001g0065 a0002c0002t0001g0066 a0002c0002t0001g0080 a0002c0002t0001g0081 a0002c0002t0001g0085 a0002c0002t0001g0086 a0002c0002t0001g0106 a0002c0002t0001g0107 a0002c0002t0001g0124 a0002c0002t0001g0160 a0002c0002t0001g0230 a0002c0002t0001g0233 a0002c0002t0002g0001 a0002c0002t0002g0002 a0002c0002t0002g0011 a0002c0002t0002g0014 a0002c0002t0002g0054 a0002c0002t0002g0055 a0002c0002t0002g0056 a0002c0002t0002g0057 a0002c0002t0002g0119 a0002c0002t0002g0120 a0002c0002t0002g0121 a0002c0002t0002g0137 a0002c0002t0002g0144 a0002c0002t0002g0149 a0002c0002t0002g0150 a0002c0002t0002g0155 a0002c0002t0002g0168 a0002c0002t0002g0169 a0002c0002t0002g0170 a0002c0002t0002g0172 a0002c0002t0002g0174 a0002c0002t0002g0175 a0002c0002t0002g0182 a0002c0002t0002g0199 a0002c0002t0002g0200 a0002c0002t0002g0201 a0002c0002t0002g0208 a0002c0002t0002g0211 a0002c0002t0002g0212 a0002c0002t0002g0218 a0002c0002t0002g0219 a0002c0002t0002g0220 a0002c0002t0002g0222 a0002c0002t0002g0225 a0002c0002t0002g0237 a0002c0002t0002g0238 a0002c0002t0002g0240 a0002c0002t0002g0241 a0002c0002t0002g0242 a0002c0002t0002g0245 a0002c0002t0002g0247 a0002c0002t0002g0250 a0002c0005t0001g0234 a0002c0005t0001g0235 a0002c0005t0001g0236 a0002c0005t0001g0243 a0002c0005t0002g0012 a0002c0005t0002g0041 a0002c0009t0002g0013 a0002c0013t0002g0030 a0002c0015t0002g0053 a0003c0003t0001g0009 a0003c0003t0001g0026 a0003c0003t0001g0046 a0003c0003t0001g0047 a0003c0003t0001g0060 a0003c0003t0001g0108 a0003c0003t0001g0111 a0003c0003t0001g0130 a0003c0003t0001g0131 a0003c0003t0001g0132 a0003c0003t0001g0133 a0003c0003t0001g0135 a0003c0003t0001g0136 a0003c0003t0001g0228 a0003c0003t0001g0229 a0003c0003t0002g0010 a0003c0003t0002g0016 a0003c0003t0002g0017 a0003c0003t0002g0018 a0003c0003t0002g0020 a0003c0003t0002g0021 a0003c0003t0002g0027 a0003c0003t0002g0029 a0003c0003t0002g0031 a0003c0003t0002g0032 a0003c0003t0002g0034 a0003c0003t0002g0035 a0003c0003t0002g0042 a0003c0003t0002g0138 a0003c0003t0002g0139 a0003c0003t0002g0152 a0003c0003t0002g0156 a0003c0003t0002g0157 a0003c0003t0002g0167 a0003c0003t0002g0171 a0003c0003t0002g0176 a0003c0003t0002g0177 a0003c0003t0002g0178 a0003c0003t0002g0179 a0003c0003t0002g0183 a0003c0003t0002g0187 a0003c0003t0002g0188 a0003c0003t0002g0189 a0003c0003t0002g0190 a0003c0003t0002g0191 a0003c0003t0002g0193 a0003c0003t0002g0194 a0003c0003t0002g0195 a0003c0003t0002g0196 a0003c0003t0002g0202 a0003c0003t0002g0203 a0003c0003t0002g0204 a0003c0003t0002g0205 a0003c0003t0002g0209 a0003c0003t0002g0221 a0003c0003t0002g0239 a0003c0003t0002g0249 a0003c0010t0004g0256 a0005c0007t0004g0253 a0005c0007t0004g0254 a0005c0007t0004g0257 a0006c0006t0001g0033 a0006c0006t0001g0159 a0006c0006t0002g0151 a0007c0008t0002g0207 a0007c0008t0003g0259 a0008c0011t0001g0140 a0009c0016t0002g0180 a0010c0014t0002g0246	141	274	0.5146	-3	c.908 others(10): Show c.908_910delAAG	p.Glu others(6): Show p.Glu303del	ALLC	ENSG00000151360.10	transcript	ENST00000252505.4	protein_coding	11/12	1065/1441	908/1176	303/391		INFO_REALIGN_3_PRIME	chr2	TogoVar
ALLC_chr2_3653200_3707671	3703299	AGCC AGCC	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01081.hp2 HG02056.hp2 HG02071.hp1 others(20): Show HG01081.hp2 HG02056.hp2 HG02071.hp1 HG02080.hp2 HG02083.hp2 HG02148.hp2 HG02451.hp1 HG02523.hp2 HG02717.hp2 HG02895.hp1 HG03139.hp2 HG03471.hp1 HG04199.hp2 NA18952.hp2 NA18961.hp2 NA18969.hp1 NA18995.hp1 NA19007.hp2 NA19063.hp1 NA19066.hp2 NA19074.hp2 NA19088.hp1 NA19091.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0002c0002 a0003c0003 others(1): Show a0001c0001 a0002c0002 a0003c0003 a0004c0004	a0001c0001t0001 a0002c0002t0002 a0003c0003t0001 others(2): Show a0001c0001t0001 a0002c0002t0002 a0003c0003t0001 a0003c0003t0002 a0004c0004t0002	a0001c0001t0001g0050 a0002c0002t0002g0002 a0003c0003t0001g0047 others(20): Show a0001c0001t0001g0050 a0002c0002t0002g0002 a0003c0003t0001g0047 a0003c0003t0001g0108 a0003c0003t0001g0111 a0003c0003t0001g0228 a0003c0003t0001g0229 a0003c0003t0002g0020 a0003c0003t0002g0027 a0003c0003t0002g0042 a0003c0003t0002g0176 a0003c0003t0002g0187 a0003c0003t0002g0193 a0003c0003t0002g0194 a0003c0003t0002g0195 a0003c0003t0002g0196 a0003c0003t0002g0202 a0003c0003t0002g0203 a0003c0003t0002g0204 a0003c0003t0002g0205 a0003c0003t0002g0209 a0003c0003t0002g0239 a0004c0004t0002g0206	23	274	0.0839	-3	c.73 others(12): Show c.737_*739delGCC		ALLC	ENSG00000151360.10	transcript	ENST00000252505.4	protein_coding					629		chr2	TogoVar
ALLC_chr2_3653200_3707671	3703303	GCCT GCCT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02258.hp2 HG02717.hp1 HG02723.hp1 others(5): Show HG02258.hp2 HG02717.hp1 HG02723.hp1 HG02886.hp1 HG03516.hp1 NA18522.hp1 NA18906.hp1 NA20129.hp1	a0002 a0004 a0007 a0002 a0004 a0007	a0002c0009 a0004c0004 a0007c0008 a0002c0009 a0004c0004 a0007c0008	a0002c0009t0002 a0004c0004t0001 a0004c0004t0002 others(3): Show a0002c0009t0002 a0004c0004t0001 a0004c0004t0002 a0004c0004t0003 a0007c0008t0002 a0007c0008t0003	a0002c0009t0002g0013 a0004c0004t0001g0037 a0004c0004t0001g0153 others(5): Show a0002c0009t0002g0013 a0004c0004t0001g0037 a0004c0004t0001g0153 a0004c0004t0002g0125 a0004c0004t0003g0251 a0004c0004t0003g0252 a0007c0008t0002g0207 a0007c0008t0003g0259	8	274	0.0292	-3	c.74 others(12): Show c.741_*743delCCT		ALLC	ENSG00000151360.10	transcript	ENST00000252505.4	protein_coding					633		chr2	TogoVar
ALLC_chr2_3653200_3707671	3704179	CGCA CGCA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02258.hp1 HG02451.hp1 HG02717.hp2 others(5): Show HG02258.hp1 HG02451.hp1 HG02717.hp2 HG02895.hp1 HG03139.hp2 HG03471.hp1 HG03579.hp1 NA21309.hp1	a0003 a0003	a0003c0003 a0003c0010 a0003c0003 a0003c0010	a0003c0003t0002 a0003c0010t0004 a0003c0003t0002 a0003c0010t0004	a0003c0003t0002g0020 a0003c0003t0002g0027 a0003c0003t0002g0034 others(5): Show a0003c0003t0002g0020 a0003c0003t0002g0027 a0003c0003t0002g0034 a0003c0003t0002g0042 a0003c0003t0002g0138 a0003c0003t0002g0176 a0003c0003t0002g0239 a0003c0010t0004g0256	8	274	0.0292	-3	c.16 others(14): Show c.1617_*1619delGCA		ALLC	ENSG00000151360.10	transcript	ENST00000252505.4	protein_coding					1509		chr2	TogoVar
ALMS1_chr2_73380836_73614916	73385903	TGGA TGGA	T T	disruptive_inframe_deletion disruptive_inframe_deletion	MODERATE	HG00642.hp2 HG01346.hp1 HG01433.hp2 others(16): Show HG00642.hp2 HG01346.hp1 HG01433.hp2 HG01928.hp2 HG01943.hp1 HG01993.hp1 HG02004.hp2 HG02056.hp1 HG02293.hp1 HG02300.hp1 HG02886.hp2 HG02976.hp1 HG03540.hp2 NA18950.hp2 NA18966.hp1 NA18971.hp2 NA19079.hp1 NA19081.hp1 NA19240.hp2	a0005 a0021 a0022 others(1): Show a0005 a0021 a0022 a0023	a0005c0005 a0005c0058 a0021c0029 others(2): Show a0005c0005 a0005c0058 a0021c0029 a0022c0028 a0023c0027	a0005c0005t0001 a0005c0058t0001 a0021c0029t0001 others(2): Show a0005c0005t0001 a0005c0058t0001 a0021c0029t0001 a0022c0028t0001 a0023c0027t0001	a0005c0005t0001g0106 a0005c0005t0001g0107 a0005c0005t0001g0108 others(16): Show a0005c0005t0001g0106 a0005c0005t0001g0107 a0005c0005t0001g0108 a0005c0005t0001g0109 a0005c0005t0001g0111 a0005c0005t0001g0112 a0005c0005t0001g0113 a0005c0005t0001g0114 a0005c0005t0001g0115 a0005c0005t0001g0116 a0005c0005t0001g0117 a0005c0005t0001g0118 a0005c0058t0001g0110 a0021c0029t0001g0119 a0021c0029t0001g0121 a0022c0028t0001g0009 a0022c0028t0001g0010 a0023c0027t0001g0007 a0023c0027t0001g0161	19	248	0.0766	-3	c.72_ others(8): Show c.72_74delGGA	p.Glu others(5): Show p.Glu25del	ALMS1	ENSG00000116127.20	transcript	ENST00000613296.6	protein_coding	1/23	105/12844	72/12507	24/4168		INFO_REALIGN_3_PRIME	chr2	TogoVar
ALMS1_chr2_73380836_73614916	73410816	CTAA CTAA	C C	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01099.hp2 HG01884.hp2 others(17): Show HG00735.hp1 HG01099.hp2 HG01884.hp2 HG01891.hp1 HG02145.hp1 HG02451.hp2 HG02572.hp2 HG02630.hp1 HG02818.hp2 HG02886.hp1 HG02895.hp1 HG02895.hp2 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02965.hp2 HG02976.hp2 HG03041.hp2 HG03139.hp1 HG03195.hp2	a0006 a0008 a0026 others(2): Show a0006 a0008 a0026 a0027 a0028	a0006c0007 a0006c0010 a0008c0008 others(3): Show a0006c0007 a0006c0010 a0008c0008 a0026c0057 a0027c0032 a0028c0033	a0006c0007t0001 a0006c0010t0001 a0008c0008t0001 others(3): Show a0006c0007t0001 a0006c0010t0001 a0008c0008t0001 a0026c0057t0001 a0027c0032t0001 a0028c0033t0001	a0006c0007t0001g0098 a0006c0007t0001g0099 a0006c0007t0001g0100 others(17): Show a0006c0007t0001g0098 a0006c0007t0001g0099 a0006c0007t0001g0100 a0006c0007t0001g0101 a0006c0007t0001g0102 a0006c0007t0001g0228 a0006c0007t0001g0229 a0006c0010t0001g0096 a0006c0010t0001g0097 a0006c0010t0001g0103 a0006c0010t0001g0104 a0008c0008t0001g0231 a0008c0008t0001g0232 a0008c0008t0001g0233 a0008c0008t0001g0234 a0008c0008t0001g0235 a0008c0008t0001g0237 a0026c0057t0001g0105 a0027c0032t0001g0236 a0028c0033t0001g0238	20	248	0.0807	-3	c.450 others(20): Show c.450+2074_450+2076delAAT		ALMS1	ENSG00000116127.20	transcript	ENST00000613296.6	protein_coding	2/22					INFO_REALIGN_3_PRIME	chr2	TogoVar

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