Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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Select column to sort.

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
APOC1_chr19_44909608_44924346	44910674	CTTT CTTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00323.hp1 HG00408.hp1 HG01257.hp2 others(10): Show HG00323.hp1 HG00408.hp1 HG01257.hp2 HG02083.hp1 HG02280.hp1 HG02451.hp1 HG02630.hp2 HG02965.hp1 HG02965.hp2 HG03041.hp1 HG03579.hp1 NA18954.hp2 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0019 others(7): Show a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0019 a0001c0001t0001g0021 a0001c0001t0001g0027 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0061 a0001c0001t0001g0116 a0001c0001t0002g0023	13	436	0.0298	-3	c.-40 others(14): Show c.-4079_-4077delTTT	APOC1	ENSG00000130208.10	transcript	ENST00000592535.6	protein_coding		3933		chr19	TogoVar
APOC2_chr19_44941051_44954565	44941370	TCTC TCTC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp1 HG00280.hp1 HG00323.hp1 others(162): Show HG00140.hp1 HG00280.hp1 HG00323.hp1 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00544.hp1 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00621.hp1 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00738.hp1 HG01069.hp1 HG01071.hp2 HG01074.hp2 HG01081.hp2 HG01106.hp1 HG01109.hp2 HG01168.hp1 HG01257.hp1 HG01258.hp2 HG01261.hp1 HG01358.hp2 HG01433.hp2 HG01515.hp1 HG01517.hp2 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01952.hp1 HG01975.hp1 HG01993.hp2 HG02004.hp1 HG02015.hp2 HG02027.hp2 HG02040.hp2 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02083.hp1 HG02083.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02148.hp1 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02257.hp2 HG02280.hp2 HG02293.hp1 HG02451.hp2 HG02486.hp2 HG02523.hp1 HG02559.hp1 HG02572.hp1 HG02630.hp1 HG02683.hp1 HG02717.hp2 HG02723.hp1 HG02738.hp1 HG02738.hp2 HG02895.hp1 HG02897.hp2 HG02922.hp1 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03041.hp2 HG03130.hp1 HG03195.hp1 HG03209.hp1 HG03239.hp1 HG03471.hp1 HG03490.hp1 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03579.hp1 HG03654.hp1 HG03654.hp2 HG03669.hp2 HG03704.hp2 HG03831.hp1 HG03927.hp1 HG04228.hp1 NA18612.hp1 NA18940.hp1 NA18940.hp2 NA18942.hp2 NA18943.hp2 NA18948.hp2 NA18950.hp1 NA18951.hp2 NA18952.hp2 NA18953.hp1 NA18955.hp1 NA18957.hp1 NA18957.hp2 NA18960.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18968.hp2 NA18969.hp1 NA18970.hp1 NA18971.hp2 NA18972.hp2 NA18973.hp1 NA18974.hp2 NA18975.hp1 NA18977.hp1 NA18979.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp2 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA18991.hp2 NA18994.hp1 NA18995.hp1 NA18997.hp2 NA18999.hp2 NA19000.hp2 NA19002.hp2 NA19004.hp1 NA19005.hp1 NA19007.hp1 NA19007.hp2 NA19009.hp2 NA19030.hp1 NA19043.hp1 NA19055.hp2 NA19056.hp2 NA19057.hp2 NA19059.hp2 NA19060.hp2 NA19062.hp1 NA19064.hp1 NA19066.hp1 NA19066.hp2 NA19072.hp2 NA19077.hp2 NA19080.hp1 NA19081.hp2 NA19084.hp2 NA19086.hp1 NA19086.hp2 NA19087.hp2 NA19091.hp2 NA20129.hp1 NA20300.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0006	a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0001g0007 others(46): Show a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0009 a0001c0001t0001g0011 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0029 a0001c0001t0001g0050 a0001c0001t0001g0054 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0069 a0001c0001t0001g0077 a0001c0001t0001g0080 a0001c0001t0001g0089 a0001c0001t0002g0001 a0001c0001t0002g0003 a0001c0001t0002g0010 a0001c0001t0002g0011 a0001c0001t0002g0012 a0001c0001t0002g0018 a0001c0001t0002g0019 a0001c0001t0002g0020 a0001c0001t0002g0026 a0001c0001t0002g0030 a0001c0001t0002g0031 a0001c0001t0002g0045 a0001c0001t0002g0046 a0001c0001t0002g0051 a0001c0001t0002g0053 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0070 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0078 a0001c0001t0002g0081 a0001c0001t0002g0090 a0001c0001t0004g0012 a0001c0001t0004g0082 a0001c0001t0006g0001	165	398	0.4146	-3	c.-47 others(14): Show c.-4718_-4716delCTC	APOC2	ENSG00000234906.11	transcript	ENST00000252490.7	protein_coding		4680		chr19	TogoVar
APOC2_chr19_44941051_44954565	44942603	CGTG CGTG	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp2 HG00323.hp2 HG00544.hp2 others(49): Show HG00140.hp2 HG00323.hp2 HG00544.hp2 HG00621.hp2 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01123.hp2 HG01257.hp2 HG01433.hp1 HG01496.hp1 HG01934.hp2 HG01952.hp2 HG01981.hp1 HG01993.hp1 HG02004.hp2 HG02273.hp1 HG02300.hp1 HG02602.hp1 HG02602.hp2 HG02615.hp2 HG02647.hp1 HG03130.hp2 HG03453.hp2 HG03486.hp1 HG03490.hp2 HG03492.hp2 HG03669.hp1 HG03688.hp2 HG03710.hp2 HG04115.hp1 HG04115.hp2 HG04204.hp2 HG06807.hp1 NA18943.hp1 NA18955.hp2 NA18960.hp1 NA18963.hp2 NA18974.hp1 NA18977.hp2 NA18979.hp1 NA18994.hp2 NA18997.hp1 NA19030.hp2 NA19058.hp2 NA19059.hp1 NA19060.hp1 NA19062.hp2 NA19064.hp2 NA20905.hp1 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0006 others(9): Show a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0015 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0063 a0001c0001t0001g0093	52	398	0.1307	-3	c.-34 others(14): Show c.-3485_-3483delGTG	APOC2	ENSG00000234906.11	transcript	ENST00000252490.7	protein_coding		3447		chr19	TogoVar
APOC2_chr19_44941051_44954565	44953026	CAAA CAAA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00140.hp1 HG00140.hp2 HG00280.hp1 others(219): Show HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00323.hp1 HG00323.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00597.hp1 HG00609.hp1 HG00621.hp1 HG00621.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00738.hp1 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp2 HG01081.hp2 HG01106.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01243.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp2 HG01261.hp1 HG01358.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01515.hp1 HG01517.hp2 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01981.hp1 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp2 HG02027.hp2 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02148.hp1 HG02155.hp1 HG02165.hp1 HG02257.hp2 HG02258.hp1 HG02273.hp1 HG02280.hp2 HG02293.hp1 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02559.hp1 HG02572.hp1 HG02602.hp1 HG02602.hp2 HG02615.hp2 HG02630.hp1 HG02647.hp1 HG02683.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02738.hp1 HG02738.hp2 HG02922.hp1 HG02965.hp2 HG02976.hp2 HG03017.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03195.hp1 HG03209.hp1 HG03239.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03490.hp1 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03579.hp1 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp2 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04204.hp2 HG04228.hp1 HG06807.hp1 NA18612.hp1 NA18612.hp2 NA18940.hp1 NA18940.hp2 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18948.hp2 NA18951.hp2 NA18952.hp2 NA18953.hp1 NA18955.hp1 NA18955.hp2 NA18957.hp1 NA18957.hp2 NA18960.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18963.hp2 NA18968.hp2 NA18969.hp1 NA18970.hp1 NA18971.hp2 NA18973.hp1 NA18974.hp1 NA18974.hp2 NA18975.hp1 NA18977.hp1 NA18977.hp2 NA18979.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp2 NA18985.hp2 NA18986.hp1 NA18991.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA18997.hp1 NA18997.hp2 NA18999.hp2 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19004.hp1 NA19005.hp1 NA19007.hp1 NA19009.hp2 NA19030.hp1 NA19030.hp2 NA19055.hp2 NA19056.hp2 NA19057.hp2 NA19059.hp1 NA19059.hp2 NA19060.hp1 NA19060.hp2 NA19062.hp1 NA19062.hp2 NA19064.hp1 NA19064.hp2 NA19066.hp1 NA19066.hp2 NA19072.hp2 NA19077.hp2 NA19080.hp1 NA19081.hp2 NA19086.hp1 NA19086.hp2 NA19087.hp2 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20905.hp1 NA20905.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0004 others(1): Show a0001 a0002 a0004 a0006	a0001c0001 a0002c0002 a0004c0005 others(1): Show a0001c0001 a0002c0002 a0004c0005 a0006c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0006 a0002c0002t0001 a0004c0005t0002 a0006c0003t0001	a0001c0001t0001g0004 a0001c0001t0001g0009 a0001c0001t0001g0011 others(59): Show a0001c0001t0001g0004 a0001c0001t0001g0009 a0001c0001t0001g0011 a0001c0001t0001g0015 a0001c0001t0001g0021 a0001c0001t0001g0023 a0001c0001t0001g0029 a0001c0001t0001g0032 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0054 a0001c0001t0001g0064 a0001c0001t0001g0072 a0001c0001t0001g0074 a0001c0001t0001g0077 a0001c0001t0001g0080 a0001c0001t0001g0085 a0001c0001t0001g0089 a0001c0001t0001g0093 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0002g0001 a0001c0001t0002g0003 a0001c0001t0002g0010 a0001c0001t0002g0011 a0001c0001t0002g0012 a0001c0001t0002g0018 a0001c0001t0002g0019 a0001c0001t0002g0020 a0001c0001t0002g0026 a0001c0001t0002g0030 a0001c0001t0002g0031 a0001c0001t0002g0045 a0001c0001t0002g0046 a0001c0001t0002g0051 a0001c0001t0002g0053 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0070 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0078 a0001c0001t0002g0081 a0001c0001t0002g0090 a0001c0001t0004g0012 a0001c0001t0004g0082 a0001c0001t0006g0001 a0002c0002t0001g0088 a0002c0002t0001g0094 a0004c0005t0002g0003 a0006c0003t0001g0092	222	398	0.5578	-3	c.37 others(14): Show c.3778_*3780delAAA	APOC2	ENSG00000234906.11	transcript	ENST00000252490.7	protein_coding		3462		chr19	TogoVar
APOC3_chr11_116824907_116838072	116831241	CTTT CTTT	C C	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG01515.hp2 HG01517.hp2 others(4): Show HG00140.hp2 HG01515.hp2 HG01517.hp2 NA18994.hp2 NA19072.hp2 NA19076.hp2 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0010 a0001c0001t0001g0042 a0001c0001t0001g0136 others(3): Show a0001c0001t0001g0010 a0001c0001t0001g0042 a0001c0001t0001g0136 a0001c0001t0003g0047 a0001c0001t0003g0048 a0001c0001t0003g0066	7	450	0.0156	-3	c.179 others(18): Show c.179+346_179+348delTTT	APOC3	ENSG00000110245.12	transcript	ENST00000227667.8	protein_coding	3/3			chr11	TogoVar
APOC4_chr19_44937237_44950496	44941370	TCTC TCTC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp1 HG00280.hp1 HG00323.hp1 others(168): Show HG00140.hp1 HG00280.hp1 HG00323.hp1 HG00423.hp1 HG00423.hp2 HG00438.hp2 HG00544.hp1 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00621.hp1 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG00738.hp2 HG01069.hp2 HG01071.hp2 HG01074.hp2 HG01081.hp1 HG01106.hp1 HG01109.hp2 HG01168.hp2 HG01257.hp1 HG01258.hp1 HG01261.hp2 HG01358.hp2 HG01433.hp2 HG01515.hp1 HG01517.hp1 HG01891.hp1 HG01928.hp1 HG01928.hp2 HG01952.hp1 HG01975.hp1 HG01993.hp1 HG02004.hp2 HG02015.hp2 HG02027.hp2 HG02040.hp2 HG02055.hp1 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02083.hp1 HG02083.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp2 HG02257.hp1 HG02280.hp1 HG02293.hp1 HG02451.hp2 HG02486.hp2 HG02523.hp2 HG02559.hp1 HG02572.hp1 HG02630.hp1 HG02683.hp2 HG02717.hp2 HG02723.hp2 HG02738.hp1 HG02738.hp2 HG02895.hp1 HG02897.hp1 HG02922.hp1 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03041.hp2 HG03130.hp2 HG03195.hp1 HG03209.hp2 HG03225.hp2 HG03239.hp2 HG03471.hp2 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03579.hp1 HG03654.hp1 HG03654.hp2 HG03669.hp2 HG03704.hp2 HG03831.hp1 HG03927.hp2 HG04184.hp1 HG04184.hp2 HG04228.hp2 NA18612.hp1 NA18942.hp1 NA18943.hp2 NA18948.hp2 NA18950.hp2 NA18951.hp1 NA18952.hp1 NA18955.hp1 NA18957.hp1 NA18957.hp2 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp2 NA18965.hp1 NA18965.hp2 NA18968.hp2 NA18969.hp1 NA18970.hp1 NA18971.hp1 NA18972.hp2 NA18973.hp1 NA18974.hp2 NA18975.hp1 NA18977.hp1 NA18979.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp2 NA18985.hp1 NA18986.hp1 NA18986.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp2 NA18994.hp1 NA18997.hp2 NA18999.hp2 NA19000.hp2 NA19004.hp1 NA19005.hp1 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19030.hp2 NA19043.hp2 NA19055.hp1 NA19056.hp1 NA19057.hp2 NA19062.hp1 NA19064.hp1 NA19066.hp1 NA19066.hp2 NA19072.hp1 NA19074.hp1 NA19074.hp2 NA19077.hp2 NA19080.hp1 NA19081.hp2 NA19084.hp2 NA19086.hp1 NA19086.hp2 NA19087.hp2 NA19091.hp2 NA20129.hp1 NA20300.hp2 homoSapiens_chm13v2.hp1	a0001 a0003 a0006 a0001 a0003 a0006	a0001c0001 a0003c0003 a0006c0007 a0001c0001 a0003c0003 a0006c0007	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0003c0003t0001 a0006c0007t0001	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0005 others(16): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0008 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0016 a0001c0001t0001g0024 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0002g0003 a0001c0001t0002g0018 a0001c0001t0005g0005 a0003c0003t0001g0001 a0006c0007t0001g0001	171	398	0.4297	-3	c.-90 others(12): Show c.-907_-905delCTC	APOC4	ENSG00000267467.4	transcript	ENST00000592954.2	protein_coding		866		chr19	TogoVar
APOC4_chr19_44937237_44950496	44942603	CGTG CGTG	C C	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00323.hp2 HG00544.hp2 others(45): Show HG00140.hp2 HG00323.hp2 HG00544.hp2 HG00621.hp2 HG01069.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01123.hp1 HG01257.hp2 HG01433.hp1 HG01496.hp1 HG01934.hp2 HG01952.hp2 HG01981.hp1 HG01993.hp2 HG02004.hp1 HG02273.hp1 HG02300.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp2 HG02647.hp1 HG03130.hp1 HG03453.hp1 HG03486.hp1 HG03490.hp1 HG03492.hp2 HG03669.hp1 HG03688.hp2 HG03710.hp1 HG04204.hp2 HG06807.hp2 NA18943.hp1 NA18955.hp2 NA18960.hp1 NA18963.hp1 NA18974.hp1 NA18977.hp2 NA18979.hp1 NA18994.hp2 NA18997.hp1 NA19030.hp1 NA19058.hp2 NA19062.hp2 NA19064.hp2 NA20905.hp1 NA20905.hp2	a0002 a0003 a0004 a0002 a0003 a0004	a0002c0002 a0003c0003 a0004c0005 a0002c0002 a0003c0003 a0004c0005	a0002c0002t0001 a0003c0003t0001 a0003c0003t0004 others(1): Show a0002c0002t0001 a0003c0003t0001 a0003c0003t0004 a0004c0005t0001	a0002c0002t0001g0021 a0003c0003t0001g0004 a0003c0003t0001g0009 others(8): Show a0002c0002t0001g0021 a0003c0003t0001g0004 a0003c0003t0001g0009 a0003c0003t0001g0014 a0003c0003t0001g0015 a0003c0003t0001g0019 a0003c0003t0001g0020 a0003c0003t0004g0004 a0004c0005t0001g0004 a0004c0005t0001g0009 a0004c0005t0001g0015	48	398	0.1206	-3	c.76+ others(16): Show c.76+253_76+255delGGT	APOC4	ENSG00000267467.4	transcript	ENST00000592954.2	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr19	TogoVar
APOD_chr3_195563705_195588940	195566367	TGAA TGAA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00323.hp1 HG00323.hp2 HG00438.hp1 others(40): Show HG00323.hp1 HG00323.hp2 HG00438.hp1 HG00558.hp2 HG01074.hp2 HG01123.hp1 HG01256.hp2 HG01258.hp1 HG01361.hp2 HG02015.hp1 HG02056.hp1 HG02074.hp2 HG02083.hp2 HG02132.hp1 HG02165.hp2 HG02451.hp2 HG02523.hp1 HG02559.hp1 HG02622.hp1 HG02683.hp2 HG02698.hp1 HG02735.hp1 HG02738.hp2 HG03225.hp2 HG03490.hp1 HG03492.hp1 HG03516.hp2 HG03669.hp2 HG03831.hp1 HG03942.hp2 HG04115.hp2 NA18747.hp1 NA18942.hp2 NA18951.hp1 NA18960.hp1 NA18974.hp2 NA18998.hp2 NA19000.hp1 NA19006.hp2 NA19083.hp2 NA19084.hp2 NA20300.hp2 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0007 others(1): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0007 a0001c0001t0008	a0001c0001t0002g0016 a0001c0001t0002g0021 a0001c0001t0002g0022 others(28): Show a0001c0001t0002g0016 a0001c0001t0002g0021 a0001c0001t0002g0022 a0001c0001t0002g0044 a0001c0001t0002g0058 a0001c0001t0002g0123 a0001c0001t0002g0124 a0001c0001t0002g0126 a0001c0001t0002g0134 a0001c0001t0002g0135 a0001c0001t0002g0137 a0001c0001t0002g0147 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0184 a0001c0001t0002g0187 a0001c0001t0002g0188 a0001c0001t0002g0191 a0001c0001t0002g0193 a0001c0001t0002g0194 a0001c0001t0002g0197 a0001c0001t0002g0200 a0001c0001t0003g0106 a0001c0001t0003g0136 a0001c0001t0003g0152 a0001c0001t0003g0171 a0001c0001t0003g0179 a0001c0001t0003g0182 a0001c0001t0003g0192 a0001c0001t0007g0062 a0001c0001t0008g0019	43	438	0.0982	-3	c.25 others(14): Show c.2530_*2532delTTC	APOD	ENSG00000189058.9	transcript	ENST00000343267.8	protein_coding		2337		chr3	TogoVar
APOD_chr3_195563705_195588940	195578011	TAAC TAAC	T T	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp1 HG00280.hp2 others(117): Show HG00099.hp2 HG00140.hp1 HG00280.hp2 HG00423.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp2 HG00639.hp2 HG00735.hp1 HG01081.hp1 HG01168.hp2 HG01192.hp1 HG01255.hp2 HG01256.hp1 HG01257.hp2 HG01258.hp2 HG01361.hp2 HG01934.hp2 HG01943.hp2 HG02027.hp1 HG02056.hp2 HG02074.hp1 HG02080.hp2 HG02132.hp2 HG02135.hp2 HG02145.hp2 HG02155.hp2 HG02273.hp1 HG02559.hp1 HG02602.hp1 HG03017.hp1 HG03490.hp2 HG03491.hp2 HG03492.hp2 HG03579.hp2 HG03654.hp1 HG03669.hp1 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03710.hp1 HG03834.hp1 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG04184.hp2 HG04199.hp1 NA18612.hp1 NA18612.hp2 NA18941.hp1 NA18942.hp1 NA18943.hp1 NA18944.hp1 NA18944.hp2 NA18946.hp1 NA18947.hp1 NA18947.hp2 NA18948.hp2 NA18949.hp1 NA18952.hp1 NA18953.hp2 NA18954.hp1 NA18954.hp2 NA18956.hp2 NA18957.hp2 NA18959.hp1 NA18960.hp2 NA18962.hp1 NA18966.hp1 NA18966.hp2 NA18967.hp1 NA18968.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp2 NA18975.hp1 NA18977.hp1 NA18979.hp1 NA18980.hp2 NA18981.hp1 NA18982.hp1 NA18984.hp2 NA18986.hp2 NA18988.hp2 NA18989.hp1 NA18992.hp1 NA18993.hp2 NA18995.hp2 NA18997.hp2 NA18998.hp1 NA18999.hp1 NA18999.hp2 NA19001.hp2 NA19002.hp1 NA19003.hp1 NA19005.hp1 NA19005.hp2 NA19007.hp1 NA19009.hp1 NA19010.hp2 NA19030.hp2 NA19063.hp1 NA19065.hp1 NA19067.hp1 NA19068.hp1 NA19068.hp2 NA19074.hp1 NA19076.hp1 NA19076.hp2 NA19080.hp2 NA19081.hp1 NA19083.hp1 NA19084.hp1 NA19086.hp1 NA19086.hp2 NA19087.hp1 NA19088.hp1 NA19090.hp2 NA20300.hp1 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0001t0009 a0001c0001t0010	a0001c0001t0001g0007 a0001c0001t0001g0009 a0001c0001t0001g0027 others(65): Show a0001c0001t0001g0007 a0001c0001t0001g0009 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0206 a0001c0001t0001g0208 a0001c0001t0001g0209 a0001c0001t0001g0210 a0001c0001t0001g0219 a0001c0001t0001g0222 a0001c0001t0001g0229 a0001c0001t0001g0231 a0001c0001t0001g0233 a0001c0001t0001g0234 a0001c0001t0001g0241 a0001c0001t0001g0242 a0001c0001t0001g0246 a0001c0001t0001g0248 a0001c0001t0001g0253 a0001c0001t0001g0255 a0001c0001t0002g0002 a0001c0001t0002g0006 a0001c0001t0002g0018 a0001c0001t0002g0066 a0001c0001t0002g0207 a0001c0001t0002g0211 a0001c0001t0002g0213 a0001c0001t0002g0214 a0001c0001t0002g0217 a0001c0001t0002g0218 a0001c0001t0002g0224 a0001c0001t0002g0228 a0001c0001t0002g0230 a0001c0001t0002g0232 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0238 a0001c0001t0002g0239 a0001c0001t0002g0240 a0001c0001t0002g0243 a0001c0001t0002g0244 a0001c0001t0002g0245 a0001c0001t0002g0247 a0001c0001t0002g0249 a0001c0001t0002g0251 a0001c0001t0002g0254 a0001c0001t0002g0257 a0001c0001t0003g0205 a0001c0001t0003g0212 a0001c0001t0003g0216 a0001c0001t0003g0223 a0001c0001t0003g0225 a0001c0001t0003g0227 a0001c0001t0003g0235 a0001c0001t0003g0252 a0001c0001t0004g0017 a0001c0001t0004g0215 a0001c0001t0004g0220 a0001c0001t0004g0221 a0001c0001t0004g0226 a0001c0001t0005g0107 a0001c0001t0007g0062 a0001c0001t0007g0204 a0001c0001t0009g0064 a0001c0001t0010g0250	120	438	0.2740	-3	c.123 others(20): Show c.123+1325_123+1327delGTT	APOD	ENSG00000189058.9	transcript	ENST00000343267.8	protein_coding	2/4			chr3	TogoVar
APOE_chr19_44900796_44914393	44910674	CTTT CTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00323.hp2 HG00408.hp2 HG01257.hp2 others(12): Show HG00323.hp2 HG00408.hp2 HG01257.hp2 HG02083.hp1 HG02280.hp2 HG02451.hp2 HG02630.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG03041.hp1 HG03491.hp1 HG03579.hp1 NA18954.hp2 NA20129.hp1	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0002c0002 a0005c0005 a0001c0001 a0002c0002 a0005c0005	a0001c0001t0001 a0002c0002t0001 a0005c0005t0001 a0001c0001t0001 a0002c0002t0001 a0005c0005t0001	a0001c0001t0001g0002 a0001c0001t0001g0016 a0002c0002t0001g0003 others(2): Show a0001c0001t0001g0002 a0001c0001t0001g0016 a0002c0002t0001g0003 a0002c0002t0001g0008 a0005c0005t0001g0002	15	424	0.0354	-3	c.14 others(14): Show c.1425_*1427delTTT	APOE	ENSG00000130203.10	transcript	ENST00000252486.9	protein_coding		1282		chr19	TogoVar
APOH_chr17_66207033_66234415	66232625	CAAA CAAA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00280.hp2 HG01070.hp2 HG01169.hp2 others(4): Show HG00280.hp2 HG01070.hp2 HG01169.hp2 HG03579.hp1 NA18522.hp2 NA18906.hp1 NA20300.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0002c0012 a0001c0001 a0002c0002 a0002c0012	a0001c0001t0001 a0002c0002t0001 a0002c0002t0002 others(1): Show a0001c0001t0001 a0002c0002t0001 a0002c0002t0002 a0002c0012t0001	a0001c0001t0001g0088 a0001c0001t0001g0345 a0002c0002t0001g0057 others(4): Show a0001c0001t0001g0088 a0001c0001t0001g0345 a0002c0002t0001g0057 a0002c0002t0001g0149 a0002c0002t0001g0151 a0002c0002t0002g0022 a0002c0012t0001g0334	7	386	0.0181	-3	c.-32 others(14): Show c.-3249_-3247delTTT	APOH	ENSG00000091583.11	transcript	ENST00000205948.11	protein_coding		3211		chr17	TogoVar
APOL2_chr22_36221209_36244527	36227315	CAAA CAAA	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01243.hp1 HG02055.hp2 HG02280.hp2 others(7): Show HG01243.hp1 HG02055.hp2 HG02280.hp2 HG02647.hp2 HG02922.hp1 HG03225.hp1 NA18951.hp2 NA19043.hp2 NA20300.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0017 a0001c0001t0029 others(2): Show a0001c0001t0010 a0001c0001t0017 a0001c0001t0029 a0001c0001t0030 a0001c0001t0051	a0001c0001t0010g0021 a0001c0001t0010g0089 a0001c0001t0010g0090 others(5): Show a0001c0001t0010g0021 a0001c0001t0010g0089 a0001c0001t0010g0090 a0001c0001t0017g0091 a0001c0001t0017g0164 a0001c0001t0029g0088 a0001c0001t0030g0165 a0001c0001t0051g0217	10	384	0.0260	-3	c.86 others(10): Show c.86_*88delTTT	APOL2	ENSG00000128335.14	transcript	ENST00000358502.10	protein_coding	5/5	86		chr22	TogoVar
APOL2_chr22_36221209_36244527	36231475	AAAG AAAG	A A	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG01069.hp2 HG01070.hp2 others(78): Show HG00639.hp1 HG01069.hp2 HG01070.hp2 HG01168.hp1 HG01169.hp1 HG01175.hp2 HG01361.hp1 HG01516.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp2 HG02040.hp1 HG02074.hp1 HG02083.hp2 HG02109.hp2 HG02145.hp1 HG02145.hp2 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp1 HG02451.hp1 HG02486.hp1 HG02559.hp2 HG02572.hp1 HG02602.hp1 HG02615.hp1 HG02647.hp1 HG02735.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02895.hp1 HG02896.hp1 HG02922.hp2 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03098.hp1 HG03130.hp2 HG03195.hp1 HG03195.hp2 HG03225.hp2 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03486.hp1 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03704.hp1 HG03710.hp2 HG03831.hp1 HG03927.hp2 HG04115.hp1 HG06807.hp1 HG06807.hp2 NA18747.hp1 NA18947.hp1 NA18948.hp1 NA18951.hp1 NA18952.hp1 NA18959.hp2 NA18966.hp2 NA18972.hp1 NA18975.hp2 NA18988.hp1 NA18989.hp1 NA18990.hp2 NA18992.hp2 NA18993.hp2 NA19007.hp1 NA19012.hp1 NA19054.hp1 NA19056.hp1 NA19057.hp1 NA19064.hp2 NA19074.hp1 NA19091.hp2 NA20805.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0007 a0001c0001t0015 others(15): Show a0001c0001t0001 a0001c0001t0007 a0001c0001t0015 a0001c0001t0020 a0001c0001t0032 a0001c0001t0035 a0001c0001t0053 a0002c0002t0005 a0002c0002t0006 a0002c0002t0014 a0002c0002t0018 a0002c0002t0019 a0002c0002t0022 a0002c0002t0024 a0002c0002t0033 a0002c0002t0034 a0002c0002t0050 a0002c0002t0052	a0001c0001t0001g0007 a0001c0001t0001g0031 a0001c0001t0001g0049 others(45): Show a0001c0001t0001g0007 a0001c0001t0001g0031 a0001c0001t0001g0049 a0001c0001t0001g0092 a0001c0001t0001g0160 a0001c0001t0001g0172 a0001c0001t0001g0203 a0001c0001t0007g0026 a0001c0001t0015g0024 a0001c0001t0020g0073 a0001c0001t0032g0069 a0001c0001t0035g0094 a0001c0001t0053g0221 a0002c0002t0005g0003 a0002c0002t0005g0033 a0002c0002t0005g0093 a0002c0002t0005g0096 a0002c0002t0005g0115 a0002c0002t0005g0137 a0002c0002t0005g0140 a0002c0002t0005g0141 a0002c0002t0005g0151 a0002c0002t0006g0006 a0002c0002t0006g0032 a0002c0002t0006g0037 a0002c0002t0006g0047 a0002c0002t0006g0048 a0002c0002t0006g0059 a0002c0002t0006g0062 a0002c0002t0006g0100 a0002c0002t0006g0136 a0002c0002t0006g0159 a0002c0002t0006g0198 a0002c0002t0006g0202 a0002c0002t0006g0204 a0002c0002t0014g0023 a0002c0002t0014g0095 a0002c0002t0018g0041 a0002c0002t0019g0138 a0002c0002t0019g0142 a0002c0002t0022g0061 a0002c0002t0022g0070 a0002c0002t0024g0214 a0002c0002t0024g0219 a0002c0002t0033g0060 a0002c0002t0034g0139 a0002c0002t0050g0208 a0002c0002t0052g0213	81	384	0.2109	-3	c.11- others(14): Show c.11-12_11-10delCTT	APOL2	ENSG00000128335.14	transcript	ENST00000358502.10	protein_coding	3/4			chr22	TogoVar
APOL2_chr22_36221209_36244527	36238474	GTCA GTCA	G G	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01106.hp2 HG01123.hp1 others(9): Show HG00639.hp2 HG01106.hp2 HG01123.hp1 HG01167.hp2 HG01169.hp2 HG01175.hp1 HG01515.hp2 HG02055.hp1 HG03669.hp2 HG03688.hp2 HG04115.hp2 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0013 a0001c0001t0021 a0001c0001t0003 a0001c0001t0013 a0001c0001t0021	a0001c0001t0003g0019 a0001c0001t0003g0035 a0001c0001t0003g0119 others(4): Show a0001c0001t0003g0019 a0001c0001t0003g0035 a0001c0001t0003g0119 a0001c0001t0003g0120 a0001c0001t0013g0036 a0001c0001t0013g0072 a0001c0001t0021g0039	12	384	0.0313	-3	c.-13 others(20): Show c.-134+964_-134+966delTGA	APOL2	ENSG00000128335.14	transcript	ENST00000358502.10	protein_coding	1/4			chr22	TogoVar
APOL2_chr22_36221209_36244527	36241975	ATTT ATTT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00438.hp2 HG00597.hp2 HG00621.hp1 others(50): Show HG00438.hp2 HG00597.hp2 HG00621.hp1 HG00673.hp2 HG00735.hp1 HG01070.hp2 HG01168.hp2 HG01175.hp2 HG01192.hp2 HG01255.hp1 HG01496.hp2 HG01515.hp1 HG01517.hp2 HG02040.hp1 HG02083.hp2 HG02129.hp1 HG02132.hp2 HG02135.hp2 HG02165.hp1 HG02257.hp2 HG02486.hp2 HG02602.hp1 HG02602.hp2 HG02698.hp2 HG02738.hp2 HG03654.hp2 HG03834.hp2 HG03927.hp1 HG04199.hp1 NA18939.hp2 NA18941.hp1 NA18948.hp1 NA18954.hp1 NA18975.hp2 NA18977.hp1 NA18978.hp2 NA18984.hp2 NA18991.hp2 NA18992.hp2 NA18993.hp2 NA18994.hp1 NA19007.hp1 NA19009.hp2 NA19011.hp2 NA19056.hp1 NA19057.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19082.hp1 NA19086.hp2 NA20805.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(7): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0020 a0001c0001t0042 a0001c0001t0046 a0002c0002t0006 a0002c0002t0022	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 others(33): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0007 a0001c0001t0001g0058 a0001c0001t0001g0067 a0001c0001t0001g0076 a0001c0001t0001g0157 a0001c0001t0001g0167 a0001c0001t0001g0169 a0001c0001t0001g0189 a0001c0001t0001g0194 a0001c0001t0002g0005 a0001c0001t0002g0051 a0001c0001t0002g0110 a0001c0001t0002g0132 a0001c0001t0003g0008 a0001c0001t0003g0016 a0001c0001t0003g0056 a0001c0001t0003g0196 a0001c0001t0004g0014 a0001c0001t0004g0046 a0001c0001t0004g0152 a0001c0001t0004g0153 a0001c0001t0007g0012 a0001c0001t0007g0026 a0001c0001t0007g0127 a0001c0001t0007g0188 a0001c0001t0020g0073 a0001c0001t0042g0170 a0001c0001t0046g0199 a0002c0002t0006g0032 a0002c0002t0006g0037 a0002c0002t0006g0047 a0002c0002t0006g0204 a0002c0002t0022g0061	53	384	0.1380	-3	c.-26 others(14): Show c.-2671_-2669delAAA	APOL2	ENSG00000128335.14	transcript	ENST00000358502.10	protein_coding		2449		chr22	TogoVar
APOL3_chr22_36135329_36165755	36154489	CAAG CAAG	C C	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00140.hp2 HG00621.hp2 others(52): Show HG00140.hp1 HG00140.hp2 HG00621.hp2 HG00639.hp1 HG00733.hp2 HG00738.hp2 HG00741.hp1 HG01069.hp1 HG01081.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01167.hp2 HG01168.hp2 HG01175.hp2 HG01192.hp2 HG01256.hp1 HG01361.hp2 HG01515.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01891.hp2 HG02040.hp2 HG02071.hp2 HG02145.hp1 HG02148.hp1 HG02280.hp2 HG02602.hp2 HG02615.hp1 HG02698.hp1 HG02735.hp2 HG02809.hp2 HG02818.hp2 HG03098.hp2 HG03239.hp1 HG03491.hp1 HG03492.hp2 HG03831.hp1 HG03942.hp2 HG04204.hp1 NA18945.hp1 NA18946.hp2 NA18962.hp2 NA18981.hp2 NA18984.hp2 NA18999.hp2 NA19043.hp1 NA19081.hp2 NA19084.hp1 NA19088.hp2 NA19091.hp1 NA20805.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0005 a0001 a0005	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0005c0008	a0001c0001t0001 a0001c0001t0009 a0001c0002t0001 others(2): Show a0001c0001t0001 a0001c0001t0009 a0001c0002t0001 a0001c0003t0001 a0005c0008t0001	a0001c0001t0001g0010 a0001c0001t0001g0021 a0001c0001t0001g0039 others(31): Show a0001c0001t0001g0010 a0001c0001t0001g0021 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0056 a0001c0001t0001g0058 a0001c0001t0001g0070 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0141 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0151 a0001c0001t0001g0153 a0001c0001t0001g0155 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0009g0152 a0001c0002t0001g0011 a0001c0002t0001g0154 a0001c0002t0001g0159 a0001c0003t0001g0014 a0001c0003t0001g0143 a0001c0003t0001g0144 a0001c0003t0001g0150 a0001c0003t0001g0156 a0005c0008t0001g0020	55	366	0.1503	-3	c.-87 others(20): Show c.-87-5350_-87-5348delCTT	APOL3	ENSG00000128284.20	transcript	ENST00000424878.4	protein_coding	1/3			chr22	TogoVar
APOL6_chr22_35643446_35673404	35656827	TTGG TTGG	T T	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02280.hp1 HG02717.hp1 others(4): Show HG01891.hp2 HG02280.hp1 HG02717.hp1 HG02738.hp1 HG02818.hp1 HG02886.hp1 NA19240.hp2	a0002 a0002	a0002c0002 a0002c0008 a0002c0002 a0002c0008	a0002c0002t0021 a0002c0002t0022 a0002c0002t0041 others(2): Show a0002c0002t0021 a0002c0002t0022 a0002c0002t0041 a0002c0002t0048 a0002c0008t0049	a0002c0002t0021g0028 a0002c0002t0022g0061 a0002c0002t0022g0063 others(3): Show a0002c0002t0021g0028 a0002c0002t0022g0061 a0002c0002t0022g0063 a0002c0002t0041g0062 a0002c0002t0048g0028 a0002c0008t0049g0064	7	386	0.0181	-3	c.50+ others(16): Show c.50+355_50+357delGTG	APOL6	ENSG00000221963.6	transcript	ENST00000409652.5	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr22	TogoVar
APOLD1_chr12_12780659_12796466	12790108	ATTC ATTC	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00099.hp1 HG00408.hp1 HG00408.hp2 others(136): Show HG00099.hp1 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp2 HG00621.hp1 HG00642.hp1 HG00642.hp2 HG00735.hp2 HG00738.hp1 HG00741.hp1 HG01071.hp2 HG01074.hp2 HG01081.hp2 HG01099.hp2 HG01106.hp2 HG01168.hp2 HG01175.hp1 HG01192.hp2 HG01255.hp1 HG01257.hp2 HG01346.hp1 HG01358.hp1 HG01433.hp2 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG02004.hp1 HG02027.hp1 HG02040.hp1 HG02055.hp2 HG02080.hp1 HG02083.hp1 HG02135.hp1 HG02148.hp1 HG02258.hp1 HG02258.hp2 HG02300.hp2 HG02451.hp2 HG02486.hp1 HG02523.hp1 HG02523.hp2 HG02572.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp2 HG02630.hp2 HG02717.hp1 HG02809.hp1 HG02886.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02970.hp1 HG03017.hp2 HG03041.hp2 HG03130.hp2 HG03195.hp1 HG03209.hp2 HG03239.hp2 HG03453.hp2 HG03471.hp2 HG03491.hp2 HG03516.hp2 HG03540.hp1 HG03579.hp1 HG03654.hp1 HG03669.hp1 HG03688.hp2 HG03710.hp1 HG03710.hp2 HG03834.hp1 HG03927.hp2 HG06807.hp1 NA18747.hp2 NA18940.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18944.hp2 NA18945.hp1 NA18946.hp2 NA18947.hp1 NA18949.hp1 NA18950.hp2 NA18951.hp1 NA18952.hp2 NA18954.hp1 NA18954.hp2 NA18957.hp2 NA18959.hp1 NA18960.hp1 NA18961.hp2 NA18962.hp2 NA18963.hp2 NA18975.hp1 NA18977.hp1 NA18979.hp2 NA18982.hp2 NA18984.hp2 NA18985.hp2 NA18989.hp1 NA18990.hp2 NA18998.hp2 NA19001.hp2 NA19002.hp1 NA19004.hp2 NA19005.hp2 NA19009.hp2 NA19030.hp1 NA19030.hp2 NA19055.hp2 NA19058.hp1 NA19060.hp1 NA19062.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19077.hp2 NA19079.hp1 NA19082.hp2 NA19083.hp2 NA19085.hp1 NA19087.hp2 NA19088.hp2 NA19090.hp2 NA19240.hp2 NA20129.hp1 NA20300.hp2 NA20752.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0005 a0001c0007 a0001c0001 a0001c0005 a0001c0007	a0001c0001t0001 a0001c0001t0007 a0001c0001t0017 others(12): Show a0001c0001t0001 a0001c0001t0007 a0001c0001t0017 a0001c0001t0020 a0001c0001t0022 a0001c0001t0039 a0001c0001t0040 a0001c0001t0041 a0001c0001t0042 a0001c0001t0043 a0001c0001t0044 a0001c0001t0045 a0001c0001t0047 a0001c0005t0001 a0001c0007t0001	a0001c0001t0001g0001 a0001c0001t0007g0001 a0001c0001t0017g0002 others(12): Show a0001c0001t0001g0001 a0001c0001t0007g0001 a0001c0001t0017g0002 a0001c0001t0020g0001 a0001c0001t0022g0001 a0001c0001t0039g0001 a0001c0001t0040g0001 a0001c0001t0041g0001 a0001c0001t0042g0001 a0001c0001t0043g0005 a0001c0001t0044g0001 a0001c0001t0045g0001 a0001c0001t0047g0001 a0001c0005t0001g0001 a0001c0007t0001g0001	139	428	0.3248	-3	c.24 others(14): Show c.2461_*2463delTCT	APOLD1	ENSG00000178878.13	transcript	ENST00000356591.5	protein_coding	2/2	2461	INFO_REALIGN_3_PRIME	chr12	TogoVar
APOLD1_chr12_12780659_12796466	12795128	CTTT CTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp1 HG00140.hp1 HG00408.hp1 others(217): Show HG00099.hp1 HG00140.hp1 HG00408.hp1 HG00423.hp1 HG00423.hp2 HG00438.hp2 HG00544.hp1 HG00558.hp2 HG00597.hp2 HG00609.hp1 HG00621.hp1 HG00642.hp2 HG00673.hp2 HG00735.hp2 HG00738.hp1 HG00741.hp1 HG01070.hp2 HG01071.hp2 HG01074.hp2 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp2 HG01109.hp1 HG01123.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp2 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01257.hp1 HG01258.hp1 HG01258.hp2 HG01261.hp2 HG01346.hp1 HG01433.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01928.hp2 HG01952.hp2 HG01975.hp1 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp2 HG02004.hp1 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02071.hp1 HG02074.hp2 HG02080.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02148.hp1 HG02148.hp2 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02300.hp1 HG02300.hp2 HG02523.hp1 HG02559.hp1 HG02572.hp2 HG02622.hp1 HG02630.hp2 HG02735.hp1 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02896.hp2 HG02970.hp1 HG03017.hp1 HG03017.hp2 HG03098.hp2 HG03209.hp2 HG03239.hp2 HG03471.hp1 HG03490.hp2 HG03491.hp2 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp2 HG03688.hp1 HG03704.hp1 HG03710.hp1 HG03710.hp2 HG03831.hp2 HG03927.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04204.hp2 HG04228.hp2 HG06807.hp1 NA18612.hp1 NA18747.hp1 NA18747.hp2 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18944.hp1 NA18944.hp2 NA18945.hp2 NA18946.hp1 NA18947.hp1 NA18947.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18952.hp1 NA18952.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp2 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18959.hp2 NA18960.hp1 NA18960.hp2 NA18962.hp2 NA18963.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18969.hp1 NA18969.hp2 NA18971.hp1 NA18972.hp2 NA18974.hp2 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18979.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp2 NA18984.hp2 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA18989.hp1 NA18990.hp1 NA18990.hp2 NA18992.hp1 NA18995.hp1 NA18995.hp2 NA18998.hp1 NA18998.hp2 NA19000.hp1 NA19001.hp2 NA19002.hp1 NA19003.hp1 NA19004.hp2 NA19005.hp2 NA19009.hp2 NA19010.hp1 NA19012.hp2 NA19030.hp1 NA19043.hp2 NA19055.hp1 NA19055.hp2 NA19057.hp2 NA19058.hp1 NA19060.hp1 NA19060.hp2 NA19062.hp2 NA19064.hp1 NA19064.hp2 NA19066.hp1 NA19066.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19076.hp1 NA19077.hp2 NA19078.hp1 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19081.hp2 NA19082.hp1 NA19082.hp2 NA19083.hp1 NA19083.hp2 NA19084.hp2 NA19085.hp1 NA19087.hp1 NA19087.hp2 NA19088.hp1 NA19088.hp2 NA19090.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0003 a0001c0005 others(2): Show a0001c0001 a0001c0003 a0001c0005 a0002c0002 a0003c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(25): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0015 a0001c0001t0017 a0001c0001t0020 a0001c0001t0021 a0001c0001t0022 a0001c0001t0028 a0001c0001t0029 a0001c0001t0030 a0001c0001t0033 a0001c0001t0040 a0001c0001t0042 a0001c0001t0047 a0001c0001t0052 a0001c0001t0053 a0001c0003t0013 a0001c0005t0001 a0002c0002t0005 a0002c0002t0019 a0002c0002t0037 a0002c0002t0038 a0003c0006t0002	a0001c0001t0001g0001 a0001c0001t0002g0002 a0001c0001t0002g0003 others(31): Show a0001c0001t0001g0001 a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0009 a0001c0001t0003g0001 a0001c0001t0003g0003 a0001c0001t0003g0004 a0001c0001t0003g0007 a0001c0001t0004g0001 a0001c0001t0005g0001 a0001c0001t0005g0002 a0001c0001t0006g0002 a0001c0001t0007g0001 a0001c0001t0015g0001 a0001c0001t0017g0002 a0001c0001t0020g0001 a0001c0001t0021g0001 a0001c0001t0022g0001 a0001c0001t0028g0002 a0001c0001t0029g0002 a0001c0001t0030g0002 a0001c0001t0033g0002 a0001c0001t0040g0001 a0001c0001t0042g0001 a0001c0001t0047g0001 a0001c0001t0052g0001 a0001c0001t0053g0001 a0001c0003t0013g0003 a0001c0005t0001g0001 a0002c0002t0005g0002 a0002c0002t0019g0002 a0002c0002t0037g0002 a0002c0002t0038g0002 a0003c0006t0002g0002	220	428	0.5140	-3	c.74 others(14): Show c.7477_*7479delTTT	APOLD1	ENSG00000178878.13	transcript	ENST00000356591.5	protein_coding		3663		chr12	TogoVar
APOOL_chrX_84998877_85098315	85008536	TGTG TGTG	T T	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01109.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0226 a0001c0001t0004g0226	1	256	0.0039	-3	c.15+ others(18): Show c.15+4610_15+4612delGTG	APOOL	ENSG00000155008.16	transcript	ENST00000373173.7	protein_coding	1/8			chrX	TogoVar
APOOL_chrX_84998877_85098315	85021850	CCTT CCTT	C C	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02145.hp1 HG02723.hp1 others(1): Show HG02055.hp1 HG02145.hp1 HG02723.hp1 HG03041.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0105 a0001c0001t0108 a0001c0001t0114 others(1): Show a0001c0001t0105 a0001c0001t0108 a0001c0001t0114 a0001c0001t0115	a0001c0001t0105g0217 a0001c0001t0108g0214 a0001c0001t0114g0216 others(1): Show a0001c0001t0105g0217 a0001c0001t0108g0214 a0001c0001t0114g0216 a0001c0001t0115g0215	4	256	0.0156	-3	c.15+ others(20): Show c.15+17924_15+17926delCTT	APOOL	ENSG00000155008.16	transcript	ENST00000373173.7	protein_coding	1/8			chrX	TogoVar
APOOL_chrX_84998877_85098315	85038524	GTTT GTTT	G G	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01175.hp1 HG01884.hp2 others(19): Show HG01081.hp2 HG01175.hp1 HG01884.hp2 HG01891.hp1 HG02258.hp1 HG02280.hp1 HG02809.hp2 HG02886.hp2 HG02896.hp1 HG02922.hp2 HG02976.hp1 HG03098.hp1 HG03209.hp1 HG03831.hp2 HG04204.hp1 NA18943.hp1 NA18952.hp1 NA18968.hp1 NA18975.hp1 NA19011.hp2 NA19067.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0010 a0001c0001t0036 a0001c0001t0037 a0001c0001t0038 a0001c0001t0039 a0001c0001t0042 a0001c0001t0044 a0001c0001t0055	a0001c0001t0001g0138 a0001c0001t0001g0206 a0001c0001t0002g0095 others(19): Show a0001c0001t0001g0138 a0001c0001t0001g0206 a0001c0001t0002g0095 a0001c0001t0002g0113 a0001c0001t0002g0117 a0001c0001t0002g0146 a0001c0001t0004g0224 a0001c0001t0004g0227 a0001c0001t0004g0228 a0001c0001t0004g0229 a0001c0001t0004g0231 a0001c0001t0004g0232 a0001c0001t0004g0233 a0001c0001t0004g0234 a0001c0001t0010g0094 a0001c0001t0036g0225 a0001c0001t0037g0223 a0001c0001t0038g0230 a0001c0001t0039g0220 a0001c0001t0042g0222 a0001c0001t0044g0218 a0001c0001t0055g0209	22	256	0.0859	-3	c.16- others(18): Show c.16-7898_16-7896delTTT	APOOL	ENSG00000155008.16	transcript	ENST00000373173.7	protein_coding	1/8		INFO_REALIGN_3_PRIME	chrX	TogoVar
APOOL_chrX_84998877_85098315	85058881	TTTA TTTA	T T	intron_variant intron_variant	MODIFIER	NA18981.hp1 NA18981.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0050 a0001c0001t0050	a0001c0001t0050g0014 a0001c0001t0050g0014	1	256	0.0039	-3	c.394 others(20): Show c.394+2967_394+2969delTAT	APOOL	ENSG00000155008.16	transcript	ENST00000373173.7	protein_coding	5/8		INFO_REALIGN_3_PRIME	chrX	TogoVar
APOOL_chrX_84998877_85098315	85059468	CGTT CGTT	C C	intron_variant intron_variant	MODIFIER	NA19074.hp2 NA19074.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0102 a0001c0001t0102	a0001c0001t0102g0055 a0001c0001t0102g0055	1	256	0.0039	-3	c.394 others(20): Show c.394+3545_394+3547delTTG	APOOL	ENSG00000155008.16	transcript	ENST00000373173.7	protein_coding	5/8		INFO_REALIGN_3_PRIME	chrX	TogoVar
APOOL_chrX_84998877_85098315	85067873	TCTC TCTC	T T	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG02647.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0112 a0001c0001t0112	a0001c0001t0112g0019 a0001c0001t0112g0019	1	256	0.0039	-3	c.486 others(18): Show c.486+659_486+661delCTC	APOOL	ENSG00000155008.16	transcript	ENST00000373173.7	protein_coding	6/8		INFO_REALIGN_3_PRIME	chrX	TogoVar
APOOL_chrX_84998877_85098315	85090416	ATTC ATTC	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03486.hp1 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0035 a0001c0001t0035	a0001c0001t0035g0219 a0001c0001t0035g0219	1	256	0.0039	-3	c.27 others(14): Show c.2743_*2745delTCT	APOOL	ENSG00000155008.16	transcript	ENST00000373173.7	protein_coding	9/9	2743	INFO_REALIGN_3_PRIME	chrX	TogoVar
APOOL_chrX_84998877_85098315	85095825	CAAA CAAA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01243.hp1 HG01884.hp1 HG01891.hp1 others(23): Show HG01243.hp1 HG01884.hp1 HG01891.hp1 HG02257.hp1 HG02257.hp2 HG02451.hp2 HG02486.hp1 HG02615.hp1 HG02615.hp2 HG02886.hp1 HG02896.hp2 HG02897.hp2 HG02965.hp1 HG02976.hp2 HG03098.hp1 HG03130.hp1 HG03195.hp1 HG03195.hp2 HG03453.hp2 HG03486.hp2 HG03516.hp1 HG03579.hp1 NA18522.hp1 NA18981.hp1 NA19056.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0008 a0001c0001t0009 others(11): Show a0001c0001t0003 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0014 a0001c0001t0015 a0001c0001t0018 a0001c0001t0019 a0001c0001t0022 a0001c0001t0050 a0001c0001t0051 a0001c0001t0055 a0001c0001t0058	a0001c0001t0003g0107 a0001c0001t0008g0085 a0001c0001t0008g0086 others(23): Show a0001c0001t0003g0107 a0001c0001t0008g0085 a0001c0001t0008g0086 a0001c0001t0008g0200 a0001c0001t0008g0202 a0001c0001t0009g0124 a0001c0001t0009g0128 a0001c0001t0009g0169 a0001c0001t0009g0170 a0001c0001t0010g0094 a0001c0001t0011g0126 a0001c0001t0011g0127 a0001c0001t0011g0198 a0001c0001t0014g0173 a0001c0001t0014g0201 a0001c0001t0015g0007 a0001c0001t0018g0168 a0001c0001t0018g0197 a0001c0001t0019g0208 a0001c0001t0019g0210 a0001c0001t0022g0120 a0001c0001t0022g0163 a0001c0001t0050g0014 a0001c0001t0051g0006 a0001c0001t0055g0209 a0001c0001t0058g0084	26	256	0.1016	-3	c.81 others(14): Show c.8148_*8150delAAA	APOOL	ENSG00000155008.16	transcript	ENST00000373173.7	protein_coding		2511		chrX	TogoVar
APOO_chrX_23828353_23912938	23832077	GGTT GGTT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02074.hp1 HG02074.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0226 a0001c0001t0003g0226	1	269	0.0037	-3	c.15 others(14): Show c.1562_*1564delAAC	APOO	ENSG00000184831.14	transcript	ENST00000379226.9	protein_coding		1275		chrX	TogoVar
APOO_chrX_23828353_23912938	23849583	TAAA TAAA	T T	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01109.hp1 HG01993.hp2 others(13): Show HG01081.hp2 HG01109.hp1 HG01993.hp2 HG02004.hp1 HG02145.hp1 HG02280.hp1 HG02280.hp2 HG02886.hp1 HG02895.hp1 HG02897.hp1 HG03139.hp1 HG03225.hp1 HG03486.hp1 NA18951.hp2 NA18990.hp1 NA20300.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0002c0002t0003	a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0100 others(13): Show a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0100 a0001c0001t0002g0180 a0001c0001t0002g0215 a0001c0001t0004g0109 a0001c0001t0004g0110 a0001c0001t0004g0111 a0002c0002t0003g0122 a0002c0002t0003g0123 a0002c0002t0003g0124 a0002c0002t0003g0126 a0002c0002t0003g0127 a0002c0002t0003g0128 a0002c0002t0003g0129 a0002c0002t0003g0130	16	269	0.0595	-3	c.561 others(20): Show c.561+6716_561+6718delTTT	APOO	ENSG00000184831.14	transcript	ENST00000379226.9	protein_coding	7/8			chrX	TogoVar
APOO_chrX_23828353_23912938	23853431	TTTC TTTC	T T	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG01884.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0096 a0001c0001t0001g0096	1	269	0.0037	-3	c.561 others(20): Show c.561+2868_561+2870delGAA	APOO	ENSG00000184831.14	transcript	ENST00000379226.9	protein_coding	7/8			chrX	TogoVar
APOO_chrX_23828353_23912938	23853608	GTTT GTTT	G G	intron_variant intron_variant	MODIFIER	HG03486.hp2 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0074 a0001c0001t0001g0074	1	269	0.0037	-3	c.561 others(20): Show c.561+2691_561+2693delAAA	APOO	ENSG00000184831.14	transcript	ENST00000379226.9	protein_coding	7/8			chrX	TogoVar
APOO_chrX_23828353_23912938	23881947	CAAA CAAA	C C	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00280.hp1 HG00323.hp2 others(69): Show HG00140.hp1 HG00280.hp1 HG00323.hp2 HG00438.hp1 HG00544.hp1 HG00609.hp1 HG00621.hp1 HG00733.hp1 HG00738.hp1 HG01069.hp1 HG01071.hp2 HG01081.hp2 HG01106.hp1 HG01167.hp1 HG01169.hp2 HG01175.hp2 HG01192.hp1 HG01256.hp1 HG01257.hp1 HG01346.hp2 HG01358.hp1 HG01361.hp2 HG01433.hp1 HG01516.hp1 HG01952.hp1 HG01993.hp1 HG02004.hp1 HG02055.hp1 HG02129.hp1 HG02132.hp1 HG02135.hp1 HG02145.hp1 HG02165.hp1 HG02165.hp2 HG02273.hp1 HG02293.hp2 HG02300.hp1 HG02486.hp1 HG02698.hp1 HG03017.hp1 HG03491.hp2 HG03579.hp1 HG03688.hp1 HG03927.hp1 HG04184.hp1 HG06807.hp1 NA18612.hp1 NA18944.hp1 NA18949.hp2 NA18950.hp1 NA18953.hp1 NA18954.hp1 NA18957.hp2 NA18960.hp1 NA18962.hp1 NA18964.hp2 NA18977.hp1 NA18989.hp1 NA18995.hp1 NA19002.hp1 NA19009.hp1 NA19010.hp1 NA19055.hp1 NA19058.hp1 NA19060.hp1 NA19062.hp1 NA19065.hp1 NA19068.hp1 NA19081.hp2 NA20129.hp2 NA20905.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004	a0001c0001t0001g0022 a0001c0001t0001g0061 a0001c0001t0002g0113 others(69): Show a0001c0001t0001g0022 a0001c0001t0001g0061 a0001c0001t0002g0113 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0145 a0001c0001t0002g0146 a0001c0001t0002g0147 a0001c0001t0002g0148 a0001c0001t0002g0149 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0154 a0001c0001t0002g0155 a0001c0001t0002g0156 a0001c0001t0002g0157 a0001c0001t0002g0158 a0001c0001t0002g0159 a0001c0001t0002g0161 a0001c0001t0002g0162 a0001c0001t0002g0163 a0001c0001t0002g0165 a0001c0001t0002g0166 a0001c0001t0002g0167 a0001c0001t0002g0168 a0001c0001t0002g0170 a0001c0001t0002g0171 a0001c0001t0002g0172 a0001c0001t0002g0173 a0001c0001t0002g0174 a0001c0001t0002g0175 a0001c0001t0002g0176 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0179 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0182 a0001c0001t0002g0183 a0001c0001t0002g0184 a0001c0001t0002g0185 a0001c0001t0002g0186 a0001c0001t0002g0187 a0001c0001t0002g0188 a0001c0001t0002g0189 a0001c0001t0002g0190 a0001c0001t0002g0191 a0001c0001t0002g0192 a0001c0001t0002g0194 a0001c0001t0002g0195 a0001c0001t0002g0196 a0001c0001t0002g0198 a0001c0001t0002g0199 a0001c0001t0002g0200 a0001c0001t0002g0201 a0001c0001t0002g0203 a0001c0001t0002g0206 a0001c0001t0002g0207 a0001c0001t0002g0208 a0001c0001t0002g0209 a0001c0001t0002g0210 a0001c0001t0002g0211 a0001c0001t0002g0213 a0001c0001t0002g0215 a0001c0001t0002g0218 a0001c0001t0002g0219 a0001c0001t0003g0140 a0001c0001t0003g0141 a0001c0001t0003g0142 a0001c0001t0004g0101 a0001c0001t0004g0109	72	269	0.2677	-3	c.10- others(16): Show c.10-998_10-996delTTT	APOO	ENSG00000184831.14	transcript	ENST00000379226.9	protein_coding	1/8			chrX	TogoVar
APOO_chrX_23828353_23912938	23887229	CTTT CTTT	C C	intron_variant intron_variant	MODIFIER	HG02922.hp2 HG02922.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0125 a0001c0001t0003g0125	1	269	0.0037	-3	c.10- others(18): Show c.10-6280_10-6278delAAA	APOO	ENSG00000184831.14	transcript	ENST00000379226.9	protein_coding	1/8			chrX	TogoVar
APOO_chrX_23828353_23912938	23891905	TATA TATA	T T	intron_variant intron_variant	MODIFIER	HG02818.hp1 HG02818.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0205 a0001c0001t0002g0205	1	269	0.0037	-3	c.10- others(20): Show c.10-10956_10-10954delTAT	APOO	ENSG00000184831.14	transcript	ENST00000379226.9	protein_coding	1/8			chrX	TogoVar
APOO_chrX_23828353_23912938	23892335	TCCG TCCG	T T	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00438.hp2 HG00642.hp1 others(74): Show HG00323.hp2 HG00438.hp2 HG00642.hp1 HG00673.hp1 HG01081.hp1 HG01168.hp1 HG01169.hp1 HG01243.hp1 HG01261.hp1 HG01346.hp1 HG01928.hp1 HG01943.hp1 HG02015.hp1 HG02056.hp1 HG02071.hp1 HG02083.hp1 HG02145.hp1 HG02165.hp1 HG02280.hp2 HG02602.hp1 HG02683.hp2 HG02735.hp1 HG02965.hp1 HG03139.hp1 HG03654.hp1 HG03710.hp1 HG03831.hp1 HG03831.hp2 HG04115.hp1 HG04184.hp2 HG04199.hp1 HG04204.hp1 HG04228.hp1 NA18747.hp1 NA18940.hp1 NA18943.hp1 NA18945.hp1 NA18946.hp1 NA18947.hp1 NA18950.hp2 NA18951.hp1 NA18952.hp1 NA18955.hp1 NA18957.hp1 NA18959.hp1 NA18965.hp1 NA18966.hp1 NA18967.hp1 NA18969.hp2 NA18970.hp1 NA18971.hp1 NA18978.hp1 NA18979.hp1 NA18983.hp2 NA18985.hp1 NA18988.hp1 NA18991.hp1 NA18994.hp1 NA18999.hp1 NA19002.hp2 NA19004.hp1 NA19005.hp1 NA19010.hp2 NA19012.hp1 NA19067.hp1 NA19070.hp1 NA19077.hp2 NA19079.hp1 NA19084.hp2 NA19085.hp1 NA19086.hp1 NA19088.hp1 NA19089.hp1 NA19090.hp1 NA20300.hp1 NA20752.hp1 NA20805.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0004c0004 a0001c0001 a0004c0004	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(3): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0011 a0004c0004t0001	a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0001g0008 others(74): Show a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0036 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0003g0216 a0001c0001t0003g0222 a0001c0001t0004g0011 a0001c0001t0004g0037 a0001c0001t0004g0109 a0001c0001t0004g0110 a0001c0001t0004g0111 a0001c0001t0004g0112 a0001c0001t0007g0002 a0001c0001t0011g0268 a0004c0004t0001g0035	77	269	0.2863	-3	c.10- others(20): Show c.10-11386_10-11384delCGG	APOO	ENSG00000184831.14	transcript	ENST00000379226.9	protein_coding	1/8			chrX	TogoVar
APPBP2_chr17_60438158_60531242	60470793	ATTT ATTT	A A	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01109.hp1 HG01891.hp1 others(22): Show HG00639.hp2 HG01109.hp1 HG01891.hp1 HG02055.hp2 HG02145.hp2 HG02723.hp2 HG02809.hp1 HG02886.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03209.hp2 HG03471.hp2 HG03486.hp2 HG03516.hp1 HG03540.hp2 HG03579.hp1 NA18522.hp2 NA18906.hp1 NA19030.hp2 NA19240.hp1 NA21309.hp2	a0002 a0002	a0002c0002 a0002c0003 a0002c0002 a0002c0003	a0002c0002t0009 a0002c0002t0014 a0002c0002t0018 others(9): Show a0002c0002t0009 a0002c0002t0014 a0002c0002t0018 a0002c0002t0019 a0002c0002t0020 a0002c0003t0007 a0002c0003t0008 a0002c0003t0010 a0002c0003t0013 a0002c0003t0016 a0002c0003t0017 a0002c0003t0039	a0002c0002t0009g0010 a0002c0002t0009g0012 a0002c0002t0009g0018 others(22): Show a0002c0002t0009g0010 a0002c0002t0009g0012 a0002c0002t0009g0018 a0002c0002t0014g0019 a0002c0002t0014g0020 a0002c0002t0018g0021 a0002c0002t0019g0022 a0002c0002t0020g0017 a0002c0003t0007g0007 a0002c0003t0007g0008 a0002c0003t0007g0014 a0002c0003t0007g0015 a0002c0003t0007g0016 a0002c0003t0008g0004 a0002c0003t0008g0005 a0002c0003t0008g0006 a0002c0003t0010g0009 a0002c0003t0010g0011 a0002c0003t0010g0013 a0002c0003t0013g0023 a0002c0003t0013g0024 a0002c0003t0016g0139 a0002c0003t0016g0140 a0002c0003t0017g0003 a0002c0003t0039g0141	25	144	0.1736	-3	c.504 others(20): Show c.504-4337_504-4335delAAA	APPBP2	ENSG00000062725.10	transcript	ENST00000083182.8	protein_coding	4/12			chr17	TogoVar
APPBP2_chr17_60438158_60531242	60491949	CCCT CCCT	C C	intron_variant intron_variant	MODIFIER	HG01168.hp2 HG01243.hp1 HG02572.hp1 others(4): Show HG01168.hp2 HG01243.hp1 HG02572.hp1 HG02723.hp1 HG03041.hp1 HG03453.hp1 NA20300.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0004 a0002c0002t0004	a0002c0002t0004g0032 a0002c0002t0004g0033 a0002c0002t0004g0034 others(4): Show a0002c0002t0004g0032 a0002c0002t0004g0033 a0002c0002t0004g0034 a0002c0002t0004g0035 a0002c0002t0004g0036 a0002c0002t0004g0037 a0002c0002t0004g0038	7	144	0.0486	-3	c.379 others(20): Show c.379+2514_379+2516delAGG	APPBP2	ENSG00000062725.10	transcript	ENST00000083182.8	protein_coding	3/12			chr17	TogoVar
APPBP2_chr17_60438158_60531242	60493633	CTTT CTTT	C C	intron_variant intron_variant	MODIFIER	HG01168.hp2 HG01243.hp1 HG02572.hp1 others(4): Show HG01168.hp2 HG01243.hp1 HG02572.hp1 HG02723.hp1 HG03041.hp1 HG03453.hp1 NA20300.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0004 a0002c0002t0004	a0002c0002t0004g0032 a0002c0002t0004g0033 a0002c0002t0004g0034 others(4): Show a0002c0002t0004g0032 a0002c0002t0004g0033 a0002c0002t0004g0034 a0002c0002t0004g0035 a0002c0002t0004g0036 a0002c0002t0004g0037 a0002c0002t0004g0038	7	144	0.0486	-3	c.379 others(18): Show c.379+830_379+832delAAA	APPBP2	ENSG00000062725.10	transcript	ENST00000083182.8	protein_coding	3/12			chr17	TogoVar
APPBP2_chr17_60438158_60531242	60495436	TTTA TTTA	T T	intron_variant intron_variant	MODIFIER	HG01168.hp2 HG01243.hp1 HG02723.hp1 others(2): Show HG01168.hp2 HG01243.hp1 HG02723.hp1 HG03041.hp1 HG03453.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0004 a0002c0002t0004	a0002c0002t0004g0032 a0002c0002t0004g0034 a0002c0002t0004g0035 others(2): Show a0002c0002t0004g0032 a0002c0002t0004g0034 a0002c0002t0004g0035 a0002c0002t0004g0036 a0002c0002t0004g0037	5	144	0.0347	-3	c.228 others(18): Show c.228-822_228-820delTAA	APPBP2	ENSG00000062725.10	transcript	ENST00000083182.8	protein_coding	2/12			chr17	TogoVar
APPBP2_chr17_60438158_60531242	60505676	GTTT GTTT	G G	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02572.hp1 HG03041.hp1 others(2): Show HG01243.hp1 HG02572.hp1 HG03041.hp1 HG03453.hp1 NA20300.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0004 a0002c0002t0004	a0002c0002t0004g0032 a0002c0002t0004g0033 a0002c0002t0004g0034 others(2): Show a0002c0002t0004g0032 a0002c0002t0004g0033 a0002c0002t0004g0034 a0002c0002t0004g0036 a0002c0002t0004g0038	5	144	0.0347	-3	c.139 others(20): Show c.139-5192_139-5190delAAA	APPBP2	ENSG00000062725.10	transcript	ENST00000083182.8	protein_coding	1/12			chr17	TogoVar
APPBP2_chr17_60438158_60531242	60512958	CTTT CTTT	C C	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01109.hp1 HG01891.hp1 others(22): Show HG00639.hp2 HG01109.hp1 HG01891.hp1 HG02055.hp2 HG02145.hp2 HG02723.hp2 HG02809.hp1 HG02886.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03209.hp2 HG03471.hp2 HG03486.hp2 HG03516.hp1 HG03540.hp2 HG03579.hp1 NA18522.hp2 NA18906.hp1 NA19030.hp2 NA19240.hp1 NA21309.hp2	a0002 a0002	a0002c0002 a0002c0003 a0002c0002 a0002c0003	a0002c0002t0009 a0002c0002t0014 a0002c0002t0018 others(9): Show a0002c0002t0009 a0002c0002t0014 a0002c0002t0018 a0002c0002t0019 a0002c0002t0020 a0002c0003t0007 a0002c0003t0008 a0002c0003t0010 a0002c0003t0013 a0002c0003t0016 a0002c0003t0017 a0002c0003t0039	a0002c0002t0009g0010 a0002c0002t0009g0012 a0002c0002t0009g0018 others(22): Show a0002c0002t0009g0010 a0002c0002t0009g0012 a0002c0002t0009g0018 a0002c0002t0014g0019 a0002c0002t0014g0020 a0002c0002t0018g0021 a0002c0002t0019g0022 a0002c0002t0020g0017 a0002c0003t0007g0007 a0002c0003t0007g0008 a0002c0003t0007g0014 a0002c0003t0007g0015 a0002c0003t0007g0016 a0002c0003t0008g0004 a0002c0003t0008g0005 a0002c0003t0008g0006 a0002c0003t0010g0009 a0002c0003t0010g0011 a0002c0003t0010g0013 a0002c0003t0013g0023 a0002c0003t0013g0024 a0002c0003t0016g0139 a0002c0003t0016g0140 a0002c0003t0017g0003 a0002c0003t0039g0141	25	144	0.1736	-3	c.139 others(22): Show c.139-12474_139-12472delAAA	APPBP2	ENSG00000062725.10	transcript	ENST00000083182.8	protein_coding	1/12			chr17	TogoVar
APPBP2_chr17_60438158_60531242	60518836	CTTT CTTT	C C	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01952.hp1 HG02886.hp2 others(4): Show HG01099.hp1 HG01952.hp1 HG02886.hp2 HG03139.hp1 HG03195.hp1 HG03225.hp2 HG03579.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0001 a0002c0002t0003g0025 a0002c0002t0003g0026 others(2): Show a0002c0002t0003g0001 a0002c0002t0003g0025 a0002c0002t0003g0026 a0002c0002t0003g0027 a0002c0002t0003g0028	7	144	0.0486	-3	c.138 others(20): Show c.138+6955_138+6957delAAA	APPBP2	ENSG00000062725.10	transcript	ENST00000083182.8	protein_coding	1/12			chr17	TogoVar
APPL2_chr12_105168300_105241174	105174853	ATGC ATGC	A A	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG01099.hp1 HG01123.hp1 others(36): Show HG00323.hp2 HG01099.hp1 HG01123.hp1 HG01243.hp1 HG01257.hp1 HG01258.hp2 HG01981.hp2 HG02004.hp1 HG02055.hp2 HG02109.hp1 HG02148.hp1 HG02257.hp1 HG02486.hp1 HG02615.hp2 HG02630.hp2 HG02717.hp2 HG02723.hp1 HG02738.hp1 HG02895.hp2 HG02922.hp1 HG02976.hp1 HG03041.hp2 HG03130.hp1 HG03195.hp2 HG03453.hp2 HG03471.hp2 HG03491.hp2 HG03492.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03654.hp2 HG04199.hp2 HG06807.hp1 NA18522.hp2 NA19043.hp1 NA19043.hp2 NA20129.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0006 a0001c0001 a0001c0006	a0001c0001t0004 a0001c0001t0018 a0001c0006t0004 a0001c0001t0004 a0001c0001t0018 a0001c0006t0004	a0001c0001t0004g0001 a0001c0001t0004g0005 a0001c0001t0004g0014 others(24): Show a0001c0001t0004g0001 a0001c0001t0004g0005 a0001c0001t0004g0014 a0001c0001t0004g0118 a0001c0001t0004g0120 a0001c0001t0004g0121 a0001c0001t0004g0122 a0001c0001t0004g0123 a0001c0001t0004g0124 a0001c0001t0004g0125 a0001c0001t0004g0126 a0001c0001t0004g0130 a0001c0001t0004g0131 a0001c0001t0004g0132 a0001c0001t0004g0133 a0001c0001t0004g0232 a0001c0001t0004g0246 a0001c0001t0004g0247 a0001c0001t0004g0248 a0001c0001t0004g0249 a0001c0001t0018g0270 a0001c0006t0004g0002 a0001c0006t0004g0006 a0001c0006t0004g0022 a0001c0006t0004g0250 a0001c0006t0004g0251 a0001c0006t0004g0252	39	392	0.0995	-3	c.186 others(20): Show c.1861-408_1861-406delGCA	APPL2	ENSG00000136044.12	transcript	ENST00000258530.8	protein_coding	20/20			chr12	TogoVar
APPL2_chr12_105168300_105241174	105175836	TAAG TAAG	T T	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG02027.hp2 HG02071.hp2 others(14): Show HG00408.hp1 HG02027.hp2 HG02071.hp2 NA18944.hp2 NA18951.hp2 NA18952.hp1 NA18970.hp1 NA18977.hp2 NA18983.hp1 NA18987.hp1 NA18989.hp1 NA18992.hp1 NA19005.hp2 NA19060.hp2 NA19064.hp1 NA19088.hp1 NA19089.hp1	a0001 a0011 a0001 a0011	a0001c0004 a0011c0015 a0001c0004 a0011c0015	a0001c0004t0006 a0011c0015t0006 a0001c0004t0006 a0011c0015t0006	a0001c0004t0006g0004 a0001c0004t0006g0100 a0001c0004t0006g0102 others(12): Show a0001c0004t0006g0004 a0001c0004t0006g0100 a0001c0004t0006g0102 a0001c0004t0006g0103 a0001c0004t0006g0106 a0001c0004t0006g0107 a0001c0004t0006g0108 a0001c0004t0006g0109 a0001c0004t0006g0110 a0001c0004t0006g0111 a0001c0004t0006g0112 a0001c0004t0006g0113 a0001c0004t0006g0114 a0001c0004t0006g0115 a0011c0015t0006g0101	17	392	0.0434	-3	c.186 others(20): Show c.1860+196_1860+198delCTT	APPL2	ENSG00000136044.12	transcript	ENST00000258530.8	protein_coding	20/20			chr12	TogoVar
APPL2_chr12_105168300_105241174	105183070	CTTT CTTT	C C	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00323.hp1 HG00408.hp2 others(130): Show HG00140.hp2 HG00323.hp1 HG00408.hp2 HG00558.hp2 HG00642.hp1 HG00642.hp2 HG00733.hp2 HG01069.hp1 HG01074.hp1 HG01099.hp1 HG01099.hp2 HG01106.hp2 HG01109.hp2 HG01123.hp1 HG01169.hp1 HG01175.hp2 HG01192.hp2 HG01243.hp1 HG01255.hp1 HG01255.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp2 HG01261.hp2 HG01346.hp2 HG01358.hp1 HG01515.hp1 HG01928.hp2 HG01934.hp1 HG01943.hp2 HG01978.hp1 HG01981.hp1 HG02015.hp1 HG02055.hp1 HG02055.hp2 HG02074.hp1 HG02080.hp2 HG02083.hp2 HG02109.hp1 HG02132.hp1 HG02135.hp2 HG02165.hp1 HG02257.hp1 HG02293.hp1 HG02300.hp2 HG02486.hp1 HG02523.hp1 HG02602.hp1 HG02615.hp2 HG02630.hp2 HG02683.hp2 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp2 HG02809.hp1 HG02895.hp2 HG02922.hp1 HG02976.hp1 HG03041.hp2 HG03098.hp2 HG03130.hp1 HG03139.hp1 HG03195.hp2 HG03209.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG03491.hp1 HG03540.hp1 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03669.hp2 HG03688.hp2 HG03831.hp2 HG03834.hp2 HG03927.hp1 HG04228.hp2 HG06807.hp1 NA18522.hp2 NA18612.hp2 NA18747.hp1 NA18940.hp2 NA18942.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18950.hp2 NA18953.hp1 NA18957.hp1 NA18963.hp1 NA18975.hp2 NA18977.hp1 NA18977.hp2 NA18979.hp2 NA18980.hp1 NA18982.hp2 NA18984.hp2 NA18985.hp2 NA18987.hp2 NA18990.hp2 NA18994.hp1 NA18995.hp1 NA18999.hp1 NA19000.hp2 NA19003.hp1 NA19003.hp2 NA19005.hp1 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19012.hp2 NA19043.hp1 NA19043.hp2 NA19055.hp2 NA19074.hp2 NA19081.hp1 NA19081.hp2 NA19082.hp2 NA19084.hp1 NA19085.hp1 NA19088.hp1 NA19090.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0008 a0010	a0001c0001 a0001c0004 a0001c0006 others(7): Show a0001c0001 a0001c0004 a0001c0006 a0001c0010 a0002c0002 a0002c0007 a0003c0008 a0004c0009 a0008c0013 a0010c0012	a0001c0001t0001 a0001c0001t0004 a0001c0001t0013 others(11): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0013 a0001c0001t0017 a0001c0001t0018 a0001c0004t0006 a0001c0006t0004 a0001c0010t0001 a0002c0002t0002 a0002c0007t0002 a0003c0008t0001 a0004c0009t0011 a0008c0013t0001 a0010c0012t0001	a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0023 others(113): Show a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0255 a0001c0001t0001g0256 a0001c0001t0001g0257 a0001c0001t0001g0258 a0001c0001t0001g0263 a0001c0001t0001g0267 a0001c0001t0001g0268 a0001c0001t0001g0271 a0001c0001t0001g0272 a0001c0001t0001g0273 a0001c0001t0001g0274 a0001c0001t0001g0276 a0001c0001t0001g0277 a0001c0001t0001g0278 a0001c0001t0001g0279 a0001c0001t0001g0280 a0001c0001t0001g0283 a0001c0001t0001g0284 a0001c0001t0001g0286 a0001c0001t0001g0288 a0001c0001t0001g0290 a0001c0001t0001g0291 a0001c0001t0001g0292 a0001c0001t0001g0293 a0001c0001t0001g0294 a0001c0001t0001g0296 a0001c0001t0001g0297 a0001c0001t0001g0298 a0001c0001t0001g0299 a0001c0001t0001g0301 a0001c0001t0001g0302 a0001c0001t0001g0303 a0001c0001t0001g0304 a0001c0001t0001g0305 a0001c0001t0001g0306 a0001c0001t0001g0307 a0001c0001t0001g0308 a0001c0001t0001g0309 a0001c0001t0001g0310 a0001c0001t0001g0311 a0001c0001t0001g0312 a0001c0001t0001g0313 a0001c0001t0001g0314 a0001c0001t0001g0315 a0001c0001t0001g0316 a0001c0001t0001g0318 a0001c0001t0001g0319 a0001c0001t0001g0320 a0001c0001t0001g0321 a0001c0001t0001g0322 a0001c0001t0001g0323 a0001c0001t0001g0324 a0001c0001t0001g0327 a0001c0001t0001g0329 a0001c0001t0001g0330 a0001c0001t0001g0332 a0001c0001t0001g0333 a0001c0001t0001g0335 a0001c0001t0001g0336 a0001c0001t0001g0337 a0001c0001t0001g0338 a0001c0001t0001g0339 a0001c0001t0001g0341 a0001c0001t0001g0342 a0001c0001t0001g0343 a0001c0001t0001g0344 a0001c0001t0001g0347 a0001c0001t0001g0349 a0001c0001t0001g0350 a0001c0001t0001g0351 a0001c0001t0001g0352 a0001c0001t0001g0353 a0001c0001t0004g0001 a0001c0001t0004g0123 a0001c0001t0004g0124 a0001c0001t0004g0125 a0001c0001t0004g0126 a0001c0001t0004g0130 a0001c0001t0004g0131 a0001c0001t0004g0133 a0001c0001t0004g0232 a0001c0001t0004g0246 a0001c0001t0004g0247 a0001c0001t0004g0248 a0001c0001t0004g0249 a0001c0001t0013g0047 a0001c0001t0017g0295 a0001c0001t0018g0270 a0001c0004t0006g0109 a0001c0004t0006g0115 a0001c0006t0004g0002 a0001c0006t0004g0006 a0001c0006t0004g0022 a0001c0006t0004g0250 a0001c0006t0004g0251 a0001c0006t0004g0252 a0001c0010t0001g0262 a0001c0010t0001g0334 a0002c0002t0002g0038 a0002c0002t0002g0046 a0002c0002t0002g0072 a0002c0007t0002g0145 a0002c0007t0002g0146 a0002c0007t0002g0147 a0003c0008t0001g0345 a0003c0008t0001g0346 a0004c0009t0011g0116 a0004c0009t0011g0117 a0008c0013t0001g0287 a0010c0012t0001g0282	133	392	0.3393	-3	c.163 others(22): Show c.1634+5200_1634+5202delAAA	APPL2	ENSG00000136044.12	transcript	ENST00000258530.8	protein_coding	17/20			chr12	TogoVar
APPL2_chr12_105168300_105241174	105186696	TATC TATC	T T	intron_variant intron_variant	MODIFIER	HG03471.hp1 HG03486.hp2 NA20129.hp1 HG03471.hp1 HG03486.hp2 NA20129.hp1	a0002 a0002	a0002c0007 a0002c0007	a0002c0007t0002 a0002c0007t0002	a0002c0007t0002g0145 a0002c0007t0002g0146 a0002c0007t0002g0147 a0002c0007t0002g0145 a0002c0007t0002g0146 a0002c0007t0002g0147	3	392	0.0077	-3	c.163 others(22): Show c.1634+1574_1634+1576delGAT	APPL2	ENSG00000136044.12	transcript	ENST00000258530.8	protein_coding	17/20			chr12	TogoVar
APPL2_chr12_105168300_105241174	105186708	TATC TATC	T T	intron_variant intron_variant	MODIFIER	NA18948.hp2 NA18950.hp2 NA19006.hp2 NA18948.hp2 NA18950.hp2 NA19006.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0283 a0001c0001t0001g0303 a0001c0001t0001g0304 a0001c0001t0001g0283 a0001c0001t0001g0303 a0001c0001t0001g0304	3	392	0.0077	-3	c.163 others(22): Show c.1634+1562_1634+1564delGAT	APPL2	ENSG00000136044.12	transcript	ENST00000258530.8	protein_coding	17/20			chr12	TogoVar
APPL2_chr12_105168300_105241174	105196425	CTTT CTTT	C C	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG01074.hp2 HG01496.hp2 others(11): Show HG00323.hp1 HG01074.hp2 HG01496.hp2 HG02015.hp1 HG02258.hp2 HG02886.hp1 HG03209.hp2 HG03516.hp1 NA18940.hp1 NA18967.hp1 NA18973.hp2 NA18975.hp1 NA18999.hp2 NA19000.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0002c0002 a0001c0001 a0001c0003 a0002c0002	a0001c0001t0001 a0001c0003t0005 a0002c0002t0002 a0001c0001t0001 a0001c0003t0005 a0002c0002t0002	a0001c0001t0001g0301 a0001c0001t0001g0322 a0001c0003t0005g0144 others(11): Show a0001c0001t0001g0301 a0001c0001t0001g0322 a0001c0003t0005g0144 a0002c0002t0002g0041 a0002c0002t0002g0063 a0002c0002t0002g0064 a0002c0002t0002g0070 a0002c0002t0002g0074 a0002c0002t0002g0075 a0002c0002t0002g0080 a0002c0002t0002g0083 a0002c0002t0002g0089 a0002c0002t0002g0094 a0002c0002t0002g0234	14	392	0.0357	-3	c.105 others(20): Show c.1053-801_1053-799delAAA	APPL2	ENSG00000136044.12	transcript	ENST00000258530.8	protein_coding	11/20			chr12	TogoVar
APRT_chr16_88804339_88816928	88809365	TCTG TCTG	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01192.hp2 HG02647.hp1 HG02809.hp2 others(3): Show HG01192.hp2 HG02647.hp1 HG02809.hp2 HG02895.hp2 HG03098.hp2 HG03540.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0009 a0001c0001t0006 a0001c0001t0009	a0001c0001t0006g0019 a0001c0001t0006g0055 a0001c0001t0009g0063 a0001c0001t0006g0019 a0001c0001t0006g0055 a0001c0001t0009g0063	6	438	0.0137	-3	c.33 others(12): Show c.330_*332delCAG	APRT	ENSG00000198931.11	transcript	ENST00000378364.8	protein_coding	5/5	330		chr16	TogoVar
APTX_chr9_32967616_33006628	32971395	ATTT ATTT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00423.hp1 HG00544.hp2 HG00642.hp2 others(105): Show HG00423.hp1 HG00544.hp2 HG00642.hp2 HG00741.hp2 HG01070.hp1 HG01071.hp2 HG01106.hp2 HG01123.hp2 HG01169.hp2 HG01175.hp1 HG01243.hp2 HG01261.hp1 HG01261.hp2 HG01361.hp1 HG01884.hp2 HG01891.hp2 HG01981.hp1 HG02015.hp1 HG02027.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02148.hp2 HG02155.hp2 HG02165.hp2 HG02451.hp2 HG02572.hp2 HG02602.hp2 HG02630.hp1 HG02630.hp2 HG02723.hp1 HG02735.hp1 HG02738.hp1 HG02738.hp2 HG02818.hp1 HG02895.hp1 HG02922.hp2 HG02970.hp1 HG03130.hp1 HG03139.hp2 HG03225.hp2 HG03486.hp2 HG03540.hp1 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03688.hp1 HG03831.hp1 HG04199.hp1 NA18522.hp2 NA18612.hp1 NA18747.hp1 NA18906.hp1 NA18940.hp1 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18952.hp2 NA18953.hp2 NA18959.hp2 NA18964.hp1 NA18965.hp1 NA18965.hp2 NA18967.hp2 NA18968.hp1 NA18968.hp2 NA18979.hp2 NA18981.hp1 NA18983.hp1 NA18984.hp1 NA18989.hp1 NA18991.hp2 NA18994.hp1 NA18995.hp2 NA18998.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19009.hp2 NA19060.hp2 NA19062.hp1 NA19062.hp2 NA19065.hp1 NA19067.hp2 NA19068.hp1 NA19072.hp1 NA19072.hp2 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19077.hp2 NA19079.hp2 NA19083.hp2 NA19090.hp1 NA19090.hp2 NA19240.hp1 NA20129.hp2 NA20752.hp1 NA20905.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0001c0005 a0004c0006 a0001c0001 a0001c0005 a0004c0006	a0001c0001t0001 a0001c0001t0006 a0001c0001t0007 others(2): Show a0001c0001t0001 a0001c0001t0006 a0001c0001t0007 a0001c0005t0001 a0004c0006t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(67): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0011 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0025 a0001c0001t0001g0027 a0001c0001t0001g0041 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0049 a0001c0001t0001g0064 a0001c0001t0001g0075 a0001c0001t0001g0081 a0001c0001t0001g0084 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0102 a0001c0001t0001g0104 a0001c0001t0001g0106 a0001c0001t0001g0112 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0124 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0207 a0001c0001t0001g0209 a0001c0001t0001g0211 a0001c0001t0001g0213 a0001c0001t0001g0214 a0001c0001t0001g0215 a0001c0001t0001g0216 a0001c0001t0001g0217 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0221 a0001c0001t0001g0224 a0001c0001t0001g0225 a0001c0001t0001g0226 a0001c0001t0001g0227 a0001c0001t0001g0228 a0001c0001t0001g0229 a0001c0001t0001g0232 a0001c0001t0001g0233 a0001c0001t0001g0234 a0001c0001t0001g0235 a0001c0001t0001g0236 a0001c0001t0001g0237 a0001c0001t0001g0238 a0001c0001t0006g0147 a0001c0001t0007g0108 a0001c0005t0001g0094 a0004c0006t0001g0210	108	388	0.2784	-3	c.21 others(14): Show c.2100_*2102delAAA	APTX	ENSG00000137074.20	transcript	ENST00000379817.7	protein_coding		1220		chr9	TogoVar

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