Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	external
TCF7L2_chr10_112945247_113172678	113117404	TCTCTCTC others(23): Show TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCC	T T	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01884.hp2 HG02723.hp2 others(3): Show HG01109.hp2 HG01884.hp2 HG02723.hp2 HG03516.hp1 HG03540.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 others(3): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0001t0008 a0001c0001t0030 a0001c0004t0013	a0001c0001t0001g0101 a0001c0001t0004g0016 a0001c0001t0005g0054 others(3): Show a0001c0001t0001g0101 a0001c0001t0004g0016 a0001c0001t0005g0054 a0001c0001t0008g0139 a0001c0001t0030g0004 a0001c0004t0013g0147	6	200	0.0300	-30	c.553 others(49): Show c.553-23755_553-23726delCTCTCCCTCTCTCTCTCTCTCTCTCT CTCT		TCF7L2	ENSG00000148737.18	transcript	ENST00000355995.9	protein_coding	5/14					INFO_REALIGN_3_PRIME	chr10	TogoVar
TCFL5_chr20_62836005_62866822	62858634	CGCAGGTG others(23): Show CGCAGGTGTTTCCCAGGGAGGAAGGGGCTAT	C C	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG00609.hp2 HG00621.hp1 others(52): Show HG00597.hp1 HG00609.hp2 HG00621.hp1 HG00733.hp2 HG01069.hp1 HG01071.hp2 HG01109.hp2 HG01255.hp2 HG01884.hp2 HG01891.hp2 HG02040.hp2 HG02055.hp2 HG02074.hp2 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02165.hp2 HG02257.hp1 HG02451.hp2 HG02622.hp1 HG02622.hp2 HG02698.hp1 HG02886.hp2 HG02965.hp2 HG02976.hp1 HG03098.hp1 HG03453.hp1 HG03471.hp1 HG03491.hp1 HG03516.hp1 HG03540.hp2 HG03579.hp2 HG03654.hp1 HG04228.hp2 HG06807.hp2 NA18522.hp2 NA18961.hp1 NA18964.hp2 NA18967.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp1 NA18979.hp1 NA18984.hp2 NA18993.hp1 NA19002.hp2 NA19003.hp2 NA19030.hp2 NA19068.hp2 NA19070.hp1 NA19076.hp1 NA19240.hp1 NA20752.hp1 NA21309.hp1 NA21309.hp2	a0001 a0002 a0005 others(1): Show a0001 a0002 a0005 a0009	a0001c0001 a0001c0003 a0002c0002 others(2): Show a0001c0001 a0001c0003 a0002c0002 a0005c0006 a0009c0007	a0001c0001t0008 a0001c0003t0001 a0001c0003t0006 others(12): Show a0001c0001t0008 a0001c0003t0001 a0001c0003t0006 a0001c0003t0007 a0001c0003t0009 a0001c0003t0013 a0001c0003t0015 a0002c0002t0005 a0002c0002t0006 a0002c0002t0014 a0002c0002t0016 a0002c0002t0018 a0002c0002t0022 a0005c0006t0006 a0009c0007t0023	a0001c0001t0008g0071 a0001c0003t0001g0175 a0001c0003t0006g0174 others(34): Show a0001c0001t0008g0071 a0001c0003t0001g0175 a0001c0003t0006g0174 a0001c0003t0007g0184 a0001c0003t0009g0090 a0001c0003t0013g0036 a0001c0003t0013g0089 a0001c0003t0015g0037 a0002c0002t0005g0005 a0002c0002t0005g0032 a0002c0002t0005g0033 a0002c0002t0005g0034 a0002c0002t0005g0056 a0002c0002t0005g0057 a0002c0002t0005g0058 a0002c0002t0005g0059 a0002c0002t0005g0062 a0002c0002t0005g0063 a0002c0002t0005g0064 a0002c0002t0005g0065 a0002c0002t0005g0066 a0002c0002t0006g0008 a0002c0002t0006g0050 a0002c0002t0006g0177 a0002c0002t0006g0178 a0002c0002t0006g0179 a0002c0002t0006g0180 a0002c0002t0006g0181 a0002c0002t0006g0183 a0002c0002t0014g0060 a0002c0002t0014g0061 a0002c0002t0016g0054 a0002c0002t0018g0055 a0002c0002t0022g0182 a0005c0006t0006g0172 a0005c0006t0006g0173 a0009c0007t0023g0116	55	390	0.1410	-30	c.994 others(45): Show c.994+700_994+729delATAGCCCCTTCCTCCCTGGGAAACACCTGC		TCFL5	ENSG00000101190.13	transcript	ENST00000335351.8	protein_coding	3/5						chr20	TogoVar
TCFL5_chr20_62836005_62866822	62858664	TGCAGGTG others(23): Show TGCAGGTGTTTCCCAGGGAGGAAGGGGCTAC	T T	intron_variant intron_variant	MODIFIER	HG02148.hp2 HG02630.hp2 HG02148.hp2 HG02630.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0039 a0001c0001t0002g0039	2	390	0.0051	-30	c.994 others(45): Show c.994+670_994+699delGTAGCCCCTTCCTCCCTGGGAAACACCTGC		TCFL5	ENSG00000101190.13	transcript	ENST00000335351.8	protein_coding	3/5						chr20	TogoVar
TCFL5_chr20_62836005_62866822	62858840	GCTACGCA others(23): Show GCTACGCAGGTGTTTCCCAGGGAGGAAGGGA	G G	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG01884.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0189 a0001c0001t0003g0189	1	390	0.0026	-30	c.994 others(45): Show c.994+494_994+523delTCCCTTCCTCCCTGGGAAACACCTGCGTAG		TCFL5	ENSG00000101190.13	transcript	ENST00000335351.8	protein_coding	3/5						chr20	TogoVar
TCP11L2_chr12_106297733_106352003	106302392	GCTCAGCC others(23): Show GCTCAGCCCCCGCTCAGCCCCCGCTCCCCCA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01516.hp2 HG02280.hp2 NA18522.hp2 HG01516.hp2 HG02280.hp2 NA18522.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0005 a0001c0001t0003 a0001c0001t0005	a0001c0001t0003g0142 a0001c0001t0005g0042 a0001c0001t0003g0142 a0001c0001t0005g0042	3	344	0.0087	-30	c.-58 others(39): Show c.-584_-555delCTCAGCCCCCGCTCAGCCCCCGCTCCCCCA		TCP11L2	ENSG00000166046.11	transcript	ENST00000299045.8	protein_coding					340		chr12	TogoVar
TCTE1_chr6_44273734_44302698	44296636	TCCTCTTA others(23): Show TCCTCTTAGTGGAGAAGTGGAGACACCCGGC	T T	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00280.hp1 HG00438.hp2 others(137): Show HG00140.hp1 HG00280.hp1 HG00438.hp2 HG00597.hp2 HG00609.hp2 HG00621.hp2 HG00733.hp1 HG00741.hp1 HG01069.hp1 HG01069.hp2 HG01070.hp2 HG01074.hp1 HG01106.hp2 HG01167.hp2 HG01169.hp2 HG01192.hp1 HG01243.hp2 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01258.hp1 HG01358.hp2 HG01496.hp1 HG01515.hp1 HG01515.hp2 HG01517.hp1 HG01943.hp1 HG01952.hp2 HG01975.hp2 HG01981.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02040.hp1 HG02055.hp1 HG02080.hp2 HG02109.hp1 HG02129.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp2 HG02257.hp1 HG02273.hp1 HG02280.hp2 HG02293.hp1 HG02300.hp1 HG02300.hp2 HG02523.hp2 HG02572.hp1 HG02602.hp1 HG02615.hp1 HG02630.hp1 HG02647.hp2 HG02698.hp2 HG02922.hp1 HG02970.hp1 HG03017.hp1 HG03098.hp1 HG03130.hp1 HG03195.hp1 HG03209.hp2 HG03225.hp1 HG03453.hp1 HG03471.hp1 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp2 HG03579.hp2 HG03688.hp1 HG03710.hp1 HG03710.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04184.hp2 HG04204.hp1 HG04228.hp1 HG04228.hp2 NA18747.hp1 NA18906.hp2 NA18941.hp2 NA18943.hp2 NA18944.hp2 NA18946.hp1 NA18947.hp1 NA18948.hp1 NA18949.hp1 NA18950.hp2 NA18952.hp2 NA18954.hp2 NA18960.hp2 NA18962.hp1 NA18963.hp2 NA18964.hp2 NA18969.hp2 NA18970.hp2 NA18973.hp1 NA18973.hp2 NA18974.hp2 NA18979.hp2 NA18980.hp2 NA18981.hp1 NA18985.hp1 NA18986.hp1 NA18989.hp2 NA18990.hp2 NA18993.hp1 NA18994.hp1 NA18997.hp1 NA19000.hp1 NA19001.hp2 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19010.hp1 NA19011.hp2 NA19012.hp1 NA19043.hp1 NA19054.hp2 NA19055.hp1 NA19056.hp1 NA19063.hp1 NA19064.hp1 NA19066.hp2 NA19077.hp2 NA19080.hp1 NA19082.hp2 NA19083.hp1 NA19084.hp2 NA19087.hp2 NA19090.hp2 NA20129.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0004 others(4): Show a0001 a0002 a0004 a0005 a0006 a0007 a0009	a0001c0001 a0001c0015 a0001c0018 others(6): Show a0001c0001 a0001c0015 a0001c0018 a0002c0002 a0004c0004 a0005c0007 a0006c0008 a0007c0019 a0009c0017	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(27): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0014 a0001c0001t0019 a0001c0001t0021 a0001c0001t0028 a0001c0001t0029 a0001c0001t0030 a0001c0001t0031 a0001c0001t0032 a0001c0001t0037 a0001c0001t0052 a0001c0001t0054 a0001c0001t0057 a0001c0001t0060 a0001c0001t0062 a0001c0001t0067 a0001c0001t0068 a0001c0015t0001 a0001c0018t0002 a0002c0002t0003 a0004c0004t0008 a0005c0007t0014 a0006c0008t0002 a0007c0019t0011 a0009c0017t0004	a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0006 others(96): Show a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0006 a0001c0001t0001g0026 a0001c0001t0001g0028 a0001c0001t0001g0032 a0001c0001t0001g0082 a0001c0001t0001g0121 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0136 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0145 a0001c0001t0001g0148 a0001c0001t0002g0007 a0001c0001t0002g0010 a0001c0001t0002g0011 a0001c0001t0002g0012 a0001c0001t0002g0023 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0081 a0001c0001t0002g0083 a0001c0001t0002g0095 a0001c0001t0002g0098 a0001c0001t0002g0101 a0001c0001t0002g0113 a0001c0001t0002g0115 a0001c0001t0002g0119 a0001c0001t0002g0128 a0001c0001t0002g0144 a0001c0001t0002g0146 a0001c0001t0002g0147 a0001c0001t0002g0151 a0001c0001t0004g0013 a0001c0001t0004g0016 a0001c0001t0004g0025 a0001c0001t0004g0031 a0001c0001t0004g0090 a0001c0001t0004g0094 a0001c0001t0004g0097 a0001c0001t0004g0100 a0001c0001t0004g0110 a0001c0001t0004g0152 a0001c0001t0009g0024 a0001c0001t0009g0085 a0001c0001t0009g0104 a0001c0001t0009g0125 a0001c0001t0009g0137 a0001c0001t0010g0034 a0001c0001t0010g0093 a0001c0001t0010g0096 a0001c0001t0010g0103 a0001c0001t0010g0106 a0001c0001t0010g0130 a0001c0001t0010g0150 a0001c0001t0011g0015 a0001c0001t0011g0029 a0001c0001t0011g0048 a0001c0001t0011g0127 a0001c0001t0014g0088 a0001c0001t0014g0099 a0001c0001t0014g0109 a0001c0001t0014g0111 a0001c0001t0019g0030 a0001c0001t0019g0133 a0001c0001t0019g0134 a0001c0001t0021g0131 a0001c0001t0021g0135 a0001c0001t0028g0126 a0001c0001t0029g0014 a0001c0001t0030g0027 a0001c0001t0030g0117 a0001c0001t0031g0129 a0001c0001t0032g0080 a0001c0001t0032g0089 a0001c0001t0037g0092 a0001c0001t0052g0087 a0001c0001t0054g0122 a0001c0001t0057g0139 a0001c0001t0060g0091 a0001c0001t0062g0112 a0001c0001t0067g0118 a0001c0001t0068g0138 a0001c0015t0001g0116 a0001c0018t0002g0114 a0002c0002t0003g0107 a0002c0002t0003g0108 a0004c0004t0008g0086 a0005c0007t0014g0033 a0005c0007t0014g0149 a0006c0008t0002g0084 a0006c0008t0002g0105 a0006c0008t0002g0132 a0007c0019t0011g0120 a0009c0017t0004g0102	140	364	0.3846	-30	c.-94 others(46): Show c.-94+993_-94+1022delGCCGGGTGTCTCCACTTCTCCACTAAGAG G		TCTE1	ENSG00000146221.10	transcript	ENST00000371505.5	protein_coding	1/4						chr6	TogoVar
TDG_chr12_103960872_103993874	103990078	AATATATA others(23): Show AATATATATATATATATATATATATATATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00323.hp2 HG01081.hp2 HG01168.hp1 others(15): Show HG00323.hp2 HG01081.hp2 HG01168.hp1 HG01516.hp1 HG01884.hp1 HG02572.hp2 HG02622.hp1 HG02886.hp1 HG02895.hp1 HG02896.hp2 HG03017.hp2 HG03225.hp2 HG03486.hp1 HG03834.hp2 NA18975.hp2 NA20752.hp2 NA20905.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0007 a0001c0001t0008 a0001c0001t0001 a0001c0001t0007 a0001c0001t0008	a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0020 others(11): Show a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0020 a0001c0001t0001g0058 a0001c0001t0001g0077 a0001c0001t0001g0080 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0007g0011 a0001c0001t0008g0151 a0001c0001t0008g0152 a0001c0001t0008g0154	18	444	0.0405	-30	c.29 others(41): Show c.2989_*3018delATATATATATATATATATATATATATATAT		TDG	ENSG00000139372.15	transcript	ENST00000392872.8	protein_coding					1205		chr12	TogoVar
TDRD12_chr19_32714767_32834580	32777831	ATATATAT others(23): Show ATATATATATATATATATATATATATATTTT	A A	intron_variant intron_variant	MODIFIER	NA18951.hp1 NA18974.hp2 NA18981.hp1 NA18951.hp1 NA18974.hp2 NA18981.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0034 a0002c0003t0001 a0002c0003t0034	a0002c0003t0001g0240 a0002c0003t0001g0295 a0002c0003t0034g0214 a0002c0003t0001g0240 a0002c0003t0001g0295 a0002c0003t0034g0214	3	380	0.0079	-30	c.112 others(47): Show c.1121+604_1121+633delATATATATATATATATATATATATATTT TT		TDRD12	ENSG00000173809.18	transcript	ENST00000639142.2	protein_coding	11/32					INFO_REALIGN_3_PRIME	chr19	TogoVar
TDRD12_chr19_32714767_32834580	32777833	ATATATAT others(23): Show ATATATATATATATATATATATATATTTTTT	A A	intron_variant intron_variant	MODIFIER	NA18948.hp2 NA19081.hp2 NA18948.hp2 NA19081.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0003 a0002c0003t0001 a0001c0001t0003 a0002c0003t0001	a0001c0001t0003g0363 a0002c0003t0001g0231 a0001c0001t0003g0363 a0002c0003t0001g0231	2	380	0.0053	-30	c.112 others(47): Show c.1121+606_1121+635delATATATATATATATATATATATATTTTT TT		TDRD12	ENSG00000173809.18	transcript	ENST00000639142.2	protein_coding	11/32					INFO_REALIGN_3_PRIME	chr19	TogoVar
TDRD12_chr19_32714767_32834580	32777835	ATATATAT others(23): Show ATATATATATATATATATATATATTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG04204.hp2 HG04204.hp2	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0005 a0004c0004t0005	a0004c0004t0005g0269 a0004c0004t0005g0269	1	380	0.0026	-30	c.112 others(47): Show c.1121+608_1121+637delATATATATATATATATATATATTTTTTT TT		TDRD12	ENSG00000173809.18	transcript	ENST00000639142.2	protein_coding	11/32					INFO_REALIGN_3_PRIME	chr19	TogoVar
TDRD12_chr19_32714767_32834580	32777839	ATATATAT others(23): Show ATATATATATATATATATATTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01123.hp1 HG01123.hp1	a0005 a0005	a0005c0005 a0005c0005	a0005c0005t0014 a0005c0005t0014	a0005c0005t0014g0261 a0005c0005t0014g0261	1	380	0.0026	-30	c.112 others(47): Show c.1121+612_1121+641delATATATATATATATATATTTTTTTTTTT TT		TDRD12	ENSG00000173809.18	transcript	ENST00000639142.2	protein_coding	11/32					INFO_REALIGN_3_PRIME	chr19	TogoVar
TDRD3_chr13_60392220_60578871	60496288	CATATATA others(23): Show CATATATATATATATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02922.hp1 HG03098.hp1 others(3): Show HG01884.hp2 HG02922.hp1 HG03098.hp1 NA18954.hp1 NA19083.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0144 others(3): Show a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0203 a0001c0001t0001g0225 a0001c0001t0002g0092	6	272	0.0221	-30	c.858 others(47): Show c.858+1740_858+1769delATATATATATATATATATATATATATAT AT		TDRD3	ENSG00000083544.16	transcript	ENST00000377881.8	protein_coding	8/13					INFO_REALIGN_3_PRIME	chr13	TogoVar
TDRKH_chr1_151768494_151795500	151786158	TAAAGAGA others(23): Show TAAAGAGAGAAAGGAGAACATCTAGCACCGA	T T	intron_variant intron_variant	MODIFIER	HG02074.hp1 HG02074.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0193 a0001c0001t0001g0193	1	418	0.0024	-30	c.-27 others(47): Show c.-27-3139_-27-3110delTCGGTGCTAGATGTTCTCCTTTCTCTCT TT		TDRKH	ENSG00000182134.17	transcript	ENST00000368824.8	protein_coding	1/12						chr1	TogoVar
TEAD1_chr11_12669421_12949737	12776771	TATTATTA others(23): Show TATTATTATTATTATTATTATTATTATTATC	T T	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG02486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0027 a0001c0001t0027	a0001c0001t0027g0022 a0001c0001t0027g0022	1	206	0.0049	-30	c.202 others(49): Show c.202+12350_202+12379delATTATTATTATTATTATCATTATTAT TATT		TEAD1	ENSG00000187079.20	transcript	ENST00000527636.7	protein_coding	3/12					WARNING_TRANSCRIPT_NO_START_CODON&INFO_REALIGN_3_PRIME	chr11	TogoVar
TEAD1_chr11_12669421_12949737	12814775	CTCTGTGT others(23): Show CTCTGTGTGTGTGTGTGTGTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG00642.hp2 HG00735.hp1 others(38): Show HG00609.hp1 HG00642.hp2 HG00735.hp1 HG01081.hp2 HG01106.hp2 HG01168.hp2 HG01243.hp2 HG01256.hp1 HG01258.hp1 HG01346.hp2 HG01928.hp2 HG01975.hp2 HG02055.hp1 HG02148.hp1 HG02155.hp1 HG02293.hp2 HG02486.hp2 HG02602.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02976.hp1 HG03017.hp2 HG03098.hp1 HG03471.hp1 HG03704.hp1 HG04115.hp2 HG04204.hp2 NA18906.hp2 NA18941.hp1 NA18947.hp2 NA18961.hp2 NA18964.hp1 NA18968.hp2 NA18970.hp1 NA18972.hp2 NA18979.hp2 NA19000.hp1 NA19077.hp2 NA19079.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(19): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0010 a0001c0001t0011 a0001c0001t0017 a0001c0001t0020 a0001c0001t0022 a0001c0001t0047 a0001c0002t0001 a0001c0002t0002 a0001c0002t0005 a0001c0002t0006 a0001c0002t0008 a0001c0002t0009 a0001c0002t0014 a0001c0002t0015 a0001c0002t0018 a0001c0002t0026 a0001c0002t0028 a0001c0002t0031	a0001c0001t0001g0024 a0001c0001t0001g0041 a0001c0001t0001g0118 others(38): Show a0001c0001t0001g0024 a0001c0001t0001g0041 a0001c0001t0001g0118 a0001c0001t0001g0163 a0001c0001t0001g0170 a0001c0001t0001g0175 a0001c0001t0002g0119 a0001c0001t0002g0150 a0001c0001t0002g0177 a0001c0001t0003g0126 a0001c0001t0003g0169 a0001c0001t0005g0147 a0001c0001t0010g0049 a0001c0001t0010g0164 a0001c0001t0011g0011 a0001c0001t0017g0162 a0001c0001t0020g0178 a0001c0001t0022g0125 a0001c0001t0047g0168 a0001c0002t0001g0042 a0001c0002t0001g0110 a0001c0002t0001g0111 a0001c0002t0001g0112 a0001c0002t0001g0115 a0001c0002t0001g0116 a0001c0002t0001g0152 a0001c0002t0001g0154 a0001c0002t0001g0173 a0001c0002t0002g0139 a0001c0002t0002g0155 a0001c0002t0005g0117 a0001c0002t0005g0172 a0001c0002t0006g0124 a0001c0002t0008g0122 a0001c0002t0009g0123 a0001c0002t0014g0165 a0001c0002t0015g0174 a0001c0002t0018g0167 a0001c0002t0026g0190 a0001c0002t0028g0166 a0001c0002t0031g0114	41	206	0.1990	-30	c.203 others(49): Show c.203-47473_203-47444delCTGTGTGTGTGTGTGTGTGTGTGTGT GTGT		TEAD1	ENSG00000187079.20	transcript	ENST00000527636.7	protein_coding	3/12					WARNING_TRANSCRIPT_NO_START_CODON&INFO_REALIGN_3_PRIME	chr11	TogoVar
TECRL_chr4_64272702_64414450	64333855	CTAAAAAT others(23): Show CTAAAAATACAAAAAAAAAATTAGCCGGGCG	C C	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02818.hp1 HG02922.hp1 HG01884.hp1 HG02818.hp1 HG02922.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0028 a0001c0001t0003 a0001c0001t0028	a0001c0001t0003g0215 a0001c0001t0003g0216 a0001c0001t0028g0214 a0001c0001t0003g0215 a0001c0001t0003g0216 a0001c0001t0028g0214	3	272	0.0110	-30	c.287 others(47): Show c.287-5329_287-5300delCGCCCGGCTAATTTTTTTTTTGTATTTT TA		TECRL	ENSG00000205678.8	transcript	ENST00000381210.8	protein_coding	2/11						chr4	TogoVar
TECR_chr19_14524594_14570980	14535531	AAAAAAAA others(23): Show AAAAAAAAAAAAAATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01257.hp2 HG01258.hp2 HG01257.hp2 HG01258.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0323 a0001c0001t0001g0324 a0001c0001t0001g0323 a0001c0001t0001g0324	2	332	0.0060	-30	c.15+ others(45): Show c.15+5822_15+5851delAAAAAAAAAAAATATATATATATATATATA		TECR	ENSG00000099797.15	transcript	ENST00000215567.10	protein_coding	1/12					INFO_REALIGN_3_PRIME	chr19	TogoVar
TECR_chr19_14524594_14570980	14535533	AAAAAAAA others(23): Show AAAAAAAAAAAATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01070.hp2 HG01071.hp1 HG01109.hp1 others(3): Show HG01070.hp2 HG01071.hp1 HG01109.hp1 HG01981.hp2 HG02258.hp1 HG03098.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0135 a0001c0001t0001g0305 a0001c0001t0001g0321 others(3): Show a0001c0001t0001g0135 a0001c0001t0001g0305 a0001c0001t0001g0321 a0001c0001t0001g0327 a0001c0001t0001g0328 a0001c0001t0001g0329	6	332	0.0181	-30	c.15+ others(45): Show c.15+5824_15+5853delAAAAAAAAAATATATATATATATATATATA		TECR	ENSG00000099797.15	transcript	ENST00000215567.10	protein_coding	1/12					INFO_REALIGN_3_PRIME	chr19	TogoVar
TECR_chr19_14524594_14570980	14535535	AAAAAAAA others(23): Show AAAAAAAAAATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG04199.hp2 HG01081.hp2 HG04199.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0112 a0001c0001t0002g0007 a0001c0001t0001g0112 a0001c0001t0002g0007	2	332	0.0060	-30	c.15+ others(45): Show c.15+5826_15+5855delAAAAAAAATATATATATATATATATATATA		TECR	ENSG00000099797.15	transcript	ENST00000215567.10	protein_coding	1/12					INFO_REALIGN_3_PRIME	chr19	TogoVar
TECR_chr19_14524594_14570980	14535537	AAAAAAAA others(23): Show AAAAAAAATATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02074.hp2 NA18985.hp2 HG02074.hp2 NA18985.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0094 a0001c0001t0001g0104 a0001c0001t0001g0094 a0001c0001t0001g0104	2	332	0.0060	-30	c.15+ others(45): Show c.15+5828_15+5857delAAAAAATATATATATATATATATATATATA		TECR	ENSG00000099797.15	transcript	ENST00000215567.10	protein_coding	1/12					INFO_REALIGN_3_PRIME	chr19	TogoVar
TECTB_chr10_112278400_112310038	112300289	AAGAAAGA others(23): Show AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	A A	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG02129.hp2 HG02735.hp2 others(7): Show HG00544.hp2 HG02129.hp2 HG02735.hp2 NA18747.hp1 NA18964.hp1 NA18965.hp2 NA18979.hp2 NA18998.hp2 NA19004.hp1 NA19004.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0004 a0001c0001t0001g0055 a0001c0001t0001g0200 others(3): Show a0001c0001t0001g0004 a0001c0001t0001g0055 a0001c0001t0001g0200 a0001c0001t0001g0298 a0001c0001t0001g0302 a0001c0002t0001g0080	10	438	0.0228	-30	c.907 others(45): Show c.907+735_907+764delGAAAGAAAGAAAGAAAGAAAGAGAAAGAAA		TECTB	ENSG00000119913.6	transcript	ENST00000646139.2	protein_coding	9/10					INFO_REALIGN_3_PRIME	chr10	TogoVar
TENM1_chrX_124370903_125209312	124676257	AATATATA others(23): Show AATATATATATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG03492.hp1 NA19004.hp1 others(1): Show HG02572.hp1 HG03492.hp1 NA19004.hp1 NA19005.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0009 a0001c0002t0001 a0001c0001t0001 a0001c0001t0009 a0001c0002t0001	a0001c0001t0001g0083 a0001c0001t0001g0127 a0001c0001t0009g0102 others(1): Show a0001c0001t0001g0083 a0001c0001t0001g0127 a0001c0001t0009g0102 a0001c0002t0001g0131	4	140	0.0286	-30	c.101 others(49): Show c.1016-4452_1016-4423delATATATATATATATATATATATATAT ATAT		TENM1	ENSG00000009694.14	transcript	ENST00000422452.4	protein_coding	8/34						chrX	TogoVar
TENM1_chrX_124370903_125209312	124977961	TGTGTGTG others(23): Show TGTGTGTGAGAGAGAGAGAGAGAGAGAGAGA	T T	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG02109.hp1 HG01106.hp1 HG02109.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0003t0005 a0001c0001t0001 a0001c0003t0005	a0001c0001t0001g0134 a0001c0003t0005g0112 a0001c0001t0001g0134 a0001c0003t0005g0112	2	140	0.0143	-30	c.-64 others(49): Show c.-64-14174_-64-14145delTCTCTCTCTCTCTCTCTCTCTCTCAC ACAC		TENM1	ENSG00000009694.14	transcript	ENST00000422452.4	protein_coding	3/34						chrX	TogoVar
TENM1_chrX_124370903_125209312	124977965	TGTGAGAG others(23): Show TGTGAGAGAGAGAGAGAGAGAGAGAGAGAGA	T T	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0006 a0001c0005t0006	a0001c0005t0006g0071 a0001c0005t0006g0071	1	140	0.0071	-30	c.-64 others(49): Show c.-64-14178_-64-14149delTCTCTCTCTCTCTCTCTCTCTCTCTC TCAC		TENM1	ENSG00000009694.14	transcript	ENST00000422452.4	protein_coding	3/34						chrX	TogoVar
TENM2_chr5_166974029_168269157	167716884	ATATTTTA others(23): Show ATATTTTATTTTATTTTATTTTATTTTATTT	A A	intron_variant intron_variant	MODIFIER	HG01943.hp1 HG04204.hp2 HG01943.hp1 HG04204.hp2	a0001 a0001	a0001c0002 a0001c0005 a0001c0002 a0001c0005	a0001c0002t0031 a0001c0005t0024 a0001c0002t0031 a0001c0005t0024	a0001c0002t0031g0036 a0001c0005t0024g0009 a0001c0002t0031g0036 a0001c0005t0024g0009	2	54	0.0370	-30	c.503 others(51): Show c.503-159072_503-159043delTTATTTTATTTTATTTTATTTTAT TTTATT		TENM2	ENSG00000145934.17	transcript	ENST00000518659.6	protein_coding	4/30					INFO_REALIGN_3_PRIME	chr5	TogoVar
TENM2_chr5_166974029_168269157	167872518	AAGAAAGA others(23): Show AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	A A	intron_variant intron_variant	MODIFIER	HG01943.hp2 HG02145.hp2 HG02630.hp1 others(4): Show HG01943.hp2 HG02145.hp2 HG02630.hp1 HG02895.hp2 HG02897.hp2 HG03209.hp2 HG03453.hp2	a0001 a0006 a0001 a0006	a0001c0002 a0001c0006 a0001c0015 others(4): Show a0001c0002 a0001c0006 a0001c0015 a0001c0022 a0001c0023 a0001c0026 a0006c0013	a0001c0002t0013 a0001c0006t0004 a0001c0015t0002 others(4): Show a0001c0002t0013 a0001c0006t0004 a0001c0015t0002 a0001c0022t0021 a0001c0023t0008 a0001c0026t0008 a0006c0013t0027	a0001c0002t0013g0041 a0001c0006t0004g0026 a0001c0015t0002g0051 others(4): Show a0001c0002t0013g0041 a0001c0006t0004g0026 a0001c0015t0002g0051 a0001c0022t0021g0024 a0001c0023t0008g0004 a0001c0026t0008g0005 a0006c0013t0027g0015	7	54	0.1296	-30	c.503 others(47): Show c.503-3436_503-3407delGAAAGAAAGAAAGAAAGAAAGAAAGAAA GA		TENM2	ENSG00000145934.17	transcript	ENST00000518659.6	protein_coding	4/30					INFO_REALIGN_3_PRIME	chr5	TogoVar
TENM2_chr5_166974029_168269157	168034093	GTATATAT others(23): Show GTATATATATATGTATACATATATATGTGTA	G G	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02630.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0032 a0001c0002t0002g0032	1	54	0.0185	-30	c.118 others(51): Show c.1187-13294_1187-13265delATGTATACATATATATGTGTATAT ATATAT		TENM2	ENSG00000145934.17	transcript	ENST00000518659.6	protein_coding	7/30					INFO_REALIGN_3_PRIME	chr5	TogoVar
TENM2_chr5_166974029_168269157	168076173	TTTTTATT others(23): Show TTTTTATTTTATTTTATTTTATTTTATTTTA	T T	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01943.hp2 HG02622.hp2 others(1): Show HG01081.hp2 HG01943.hp2 HG02622.hp2 HG02970.hp1	a0001 a0003 a0006 a0001 a0003 a0006	a0001c0001 a0001c0004 a0003c0020 others(1): Show a0001c0001 a0001c0004 a0003c0020 a0006c0013	a0001c0001t0001 a0001c0004t0007 a0003c0020t0028 others(1): Show a0001c0001t0001 a0001c0004t0007 a0003c0020t0028 a0006c0013t0027	a0001c0001t0001g0045 a0001c0004t0007g0054 a0003c0020t0028g0013 others(1): Show a0001c0001t0001g0045 a0001c0004t0007g0054 a0003c0020t0028g0013 a0006c0013t0027g0015	4	54	0.0741	-30	c.151 others(51): Show c.1515+13948_1515+13977delATTTTATTTTATTTTATTTTATTT TATTTT		TENM2	ENSG00000145934.17	transcript	ENST00000518659.6	protein_coding	9/30					INFO_REALIGN_3_PRIME	chr5	TogoVar
TENM2_chr5_166974029_168269157	168236972	ATATATAT others(23): Show ATATATATATATATATATATATATATATATT	A A	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02602.hp2 HG01891.hp1 HG02602.hp2	a0001 a0001	a0001c0007 a0001c0008 a0001c0007 a0001c0008	a0001c0007t0017 a0001c0008t0002 a0001c0007t0017 a0001c0008t0002	a0001c0007t0017g0030 a0001c0008t0002g0035 a0001c0007t0017g0030 a0001c0008t0002g0035	2	54	0.0370	-30	c.552 others(49): Show c.5521-7446_5521-7417delATATATATATATATATATATATATAT ATTT		TENM2	ENSG00000145934.17	transcript	ENST00000518659.6	protein_coding	27/30					INFO_REALIGN_3_PRIME	chr5	TogoVar
TENM3_chr4_182238402_182808024	182468824	TTGTGTGT others(23): Show TTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG00609.hp2 HG00673.hp2 HG01074.hp2 others(16): Show HG00609.hp2 HG00673.hp2 HG01074.hp2 HG01106.hp1 HG01167.hp1 HG01169.hp2 HG01192.hp1 HG01433.hp2 HG02004.hp1 HG02451.hp1 HG02523.hp1 HG02698.hp1 HG02965.hp1 NA18906.hp2 NA18971.hp1 NA18983.hp2 NA18984.hp1 NA19080.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(8): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0007 a0001c0008 a0001c0009 a0001c0010 a0001c0015 a0001c0025 a0001c0035	a0001c0001t0001 a0001c0002t0001 a0001c0003t0002 others(8): Show a0001c0001t0001 a0001c0002t0001 a0001c0003t0002 a0001c0004t0014 a0001c0007t0004 a0001c0008t0001 a0001c0009t0001 a0001c0010t0006 a0001c0015t0001 a0001c0025t0002 a0001c0035t0010	a0001c0001t0001g0004 a0001c0001t0001g0010 a0001c0001t0001g0013 others(16): Show a0001c0001t0001g0004 a0001c0001t0001g0010 a0001c0001t0001g0013 a0001c0001t0001g0074 a0001c0002t0001g0007 a0001c0002t0001g0067 a0001c0002t0001g0118 a0001c0003t0002g0022 a0001c0003t0002g0035 a0001c0003t0002g0078 a0001c0004t0014g0135 a0001c0007t0004g0106 a0001c0007t0004g0113 a0001c0008t0001g0011 a0001c0009t0001g0014 a0001c0010t0006g0124 a0001c0015t0001g0018 a0001c0025t0002g0071 a0001c0035t0010g0139	19	140	0.1357	-30	c.511 others(51): Show c.511+121913_511+121942delGTGTGTGTGTGTGTGTGTGTGTGT GTGTGT		TENM3	ENSG00000218336.9	transcript	ENST00000511685.6	protein_coding	3/27					INFO_REALIGN_3_PRIME	chr4	TogoVar
TENM3_chr4_182238402_182808024	182807696	TCACACAC others(23): Show TCACACACACACACACACACAGACACACACA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18522.hp2 NA18522.hp2	a0001 a0001	a0001c0014 a0001c0014	a0001c0014t0015 a0001c0014t0015	a0001c0014t0015g0107 a0001c0014t0015g0107	1	140	0.0071	-30	c.73 others(41): Show c.7346_*7375delCACACACACACACACACACAGACACACACA		TENM3	ENSG00000218336.9	transcript	ENST00000511685.6	protein_coding					4673		chr4	TogoVar
TENM4_chr11_78647829_79446030	78998573	TTTTAGGT others(23): Show TTTTAGGTAAGAACAGTGGGACTCAGTGGTG	T T	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG01243.hp2 HG02280.hp1 others(3): Show HG00741.hp2 HG01243.hp2 HG02280.hp1 HG02965.hp2 NA19009.hp2 NA19043.hp2	a0001 a0005 a0001 a0005	a0001c0002 a0001c0004 a0001c0005 others(2): Show a0001c0002 a0001c0004 a0001c0005 a0001c0020 a0005c0044	a0001c0002t0062 a0001c0004t0055 a0001c0005t0002 others(3): Show a0001c0002t0062 a0001c0004t0055 a0001c0005t0002 a0001c0005t0064 a0001c0020t0001 a0005c0044t0030	a0001c0002t0062g0092 a0001c0004t0055g0077 a0001c0005t0002g0032 others(3): Show a0001c0002t0062g0092 a0001c0004t0055g0077 a0001c0005t0002g0032 a0001c0005t0064g0094 a0001c0020t0001g0031 a0005c0044t0030g0025	6	94	0.0638	-30	c.493 others(49): Show c.493+66135_493+66164delCACCACTGAGTCCCACTGTTCTTACC TAAA		TENM4	ENSG00000149256.16	transcript	ENST00000278550.12	protein_coding	6/33						chr11	TogoVar
TENM4_chr11_78647829_79446030	79138658	TATTATAT others(23): Show TATTATATTTATATAAATACATAAAACATAC	T T	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG01074.hp2 HG01978.hp2 others(8): Show HG00741.hp2 HG01074.hp2 HG01978.hp2 HG02055.hp2 HG02559.hp1 HG02886.hp2 HG02922.hp2 NA18906.hp1 NA18964.hp1 NA19043.hp2 NA19240.hp2	a0001 a0002 a0007 a0001 a0002 a0007	a0001c0001 a0001c0002 a0001c0005 others(5): Show a0001c0001 a0001c0002 a0001c0005 a0001c0007 a0001c0008 a0001c0021 a0002c0017 a0007c0014	a0001c0001t0020 a0001c0001t0026 a0001c0001t0042 others(8): Show a0001c0001t0020 a0001c0001t0026 a0001c0001t0042 a0001c0002t0045 a0001c0005t0002 a0001c0005t0064 a0001c0007t0018 a0001c0008t0014 a0001c0021t0002 a0002c0017t0012 a0007c0014t0001	a0001c0001t0020g0005 a0001c0001t0026g0011 a0001c0001t0042g0048 others(8): Show a0001c0001t0020g0005 a0001c0001t0026g0011 a0001c0001t0042g0048 a0001c0002t0045g0059 a0001c0005t0002g0032 a0001c0005t0064g0094 a0001c0007t0018g0090 a0001c0008t0014g0067 a0001c0021t0002g0033 a0002c0017t0012g0062 a0007c0014t0001g0018	11	94	0.1170	-30	c.-66 others(49): Show c.-66+10022_-66+10051delGTATGTTTTATGTATTTATATAAATA TAAT		TENM4	ENSG00000149256.16	transcript	ENST00000278550.12	protein_coding	4/33						chr11	TogoVar
TENT4B_chr16_50148306_50240310	50189834	GTCAGGAG others(23): Show GTCAGGAGTGAGGCAGGCAGATCACTTGAGA	G G	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG02723.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0025 a0001c0001t0025	a0001c0001t0025g0016 a0001c0001t0025g0016	1	312	0.0032	-30	c.639 others(49): Show c.639-21480_639-21451delGAGGCAGGCAGATCACTTGAGATCAG GAGT		TENT4B	ENSG00000121274.14	transcript	ENST00000561678.7	protein_coding	1/11					INFO_REALIGN_3_PRIME	chr16	TogoVar
TENT4B_chr16_50148306_50240310	50205558	CTTTTTTT others(23): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG03041.hp1 NA18985.hp2 HG03041.hp1 NA18985.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0011 a0001c0001t0001 a0001c0001t0011	a0001c0001t0001g0312 a0001c0001t0011g0196 a0001c0001t0001g0312 a0001c0001t0011g0196	2	312	0.0064	-30	c.639 others(47): Show c.639-5744_639-5715delTTTTTTTTTTTTTTTTTTTTTTTTTTTT TT		TENT4B	ENSG00000121274.14	transcript	ENST00000561678.7	protein_coding	1/11					INFO_REALIGN_3_PRIME	chr16	TogoVar
TENT5A_chr6_81740730_81757681	81752010	ACCGCCGA others(23): Show ACCGCCGAAGTCGCCGCCGCCGAAGTCGCCG	A A	disruptive_inframe_deletion disruptive_inframe_deletion	MODERATE	HG00323.hp2 HG01081.hp1 HG02486.hp1 HG00323.hp2 HG01081.hp1 HG02486.hp1	a0006 a0006	a0006c0009 a0006c0009	a0006c0009t0001 a0006c0009t0043 a0006c0009t0001 a0006c0009t0043	a0006c0009t0001g0031 a0006c0009t0043g0081 a0006c0009t0001g0031 a0006c0009t0043g0081	3	446	0.0067	-30	c.102 others(37): Show c.102_131delCGGCGACTTCGGCGGCGGCGACTTCGGCGG	p.Gly others(11): Show p.Gly35_Gly44del	TENT5A	ENSG00000112773.16	transcript	ENST00000320172.11	protein_coding	2/3	419/5582	102/1329	34/442			chr6	TogoVar
TERB1_chr16_66749640_66806584	66789583	CAAAAAAA others(23): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02148.hp1 HG02148.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0222 a0001c0001t0001g0222	1	352	0.0028	-30	c.271 others(46): Show c.271+982_271+1011delTTTTTTTTTTTTTTTTTTTTTTTTTTTTT T		TERB1	ENSG00000249961.10	transcript	ENST00000433154.6	protein_coding	5/18						chr16	TogoVar
TERF1_chr8_73003864_73053123	73039770	GGTGTGTG others(23): Show GGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	NA19063.hp2 NA19067.hp2 NA19063.hp2 NA19067.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0215 a0001c0001t0001g0217 a0001c0001t0001g0215 a0001c0001t0001g0217	2	342	0.0059	-30	c.114 others(47): Show c.1143+568_1143+597delGTGTGTGTGTGTGTGTGTGTGTGTGTGT GT		TERF1	ENSG00000147601.15	transcript	ENST00000276603.10	protein_coding	9/9					INFO_REALIGN_3_PRIME	chr8	TogoVar
TERT_chr5_1248167_1300068	1272769	CCGCCATC others(23): Show CCGCCATCCACAGTCACCACATCAGACCCCA	C C	intron_variant intron_variant	MODIFIER	HG03139.hp2 HG03139.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0355 a0001c0001t0001g0355	1	392	0.0026	-30	c.228 others(47): Show c.2287-519_2287-490delTGGGGTCTGATGTGGTGACTGTGGATGG CG		TERT	ENSG00000164362.21	transcript	ENST00000310581.10	protein_coding	6/15						chr5	TogoVar
TET1_chr10_68555337_68699487	68595935	TATATATA others(23): Show TATATATATATATATATATATATATATACAC	T T	intron_variant intron_variant	MODIFIER	NA18942.hp1 NA18942.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0185 a0002c0002t0002g0185	1	282	0.0036	-30	c.191 others(49): Show c.1915-5044_1915-5015delTATATATATATATATATATATATATA CACA		TET1	ENSG00000138336.9	transcript	ENST00000373644.5	protein_coding	2/11					INFO_REALIGN_3_PRIME	chr10	TogoVar
TET1_chr10_68555337_68699487	68624642	TTCTTTCT others(23): Show TTCTTTCTTTCTTTCTTTCTCTCTCTCTCTC	T T	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02615.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0064 a0001c0001t0010g0064	1	282	0.0036	-30	c.196 others(51): Show c.1969-20052_1969-20023delTTCTTTCTTTCTTTCTCTCTCTCT CTCTCT		TET1	ENSG00000138336.9	transcript	ENST00000373644.5	protein_coding	3/11					INFO_REALIGN_3_PRIME	chr10	TogoVar
TET2_chr4_105141876_105284803	105209049	GTATATAT others(23): Show GTATATATATATATATATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	NA18960.hp1 NA18979.hp1 NA18989.hp1 others(2): Show NA18960.hp1 NA18979.hp1 NA18989.hp1 NA18989.hp2 NA19009.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0008 a0002c0002t0003 a0001c0001t0008 a0002c0002t0003	a0001c0001t0008g0301 a0001c0001t0008g0302 a0001c0001t0008g0303 others(2): Show a0001c0001t0008g0301 a0001c0001t0008g0302 a0001c0001t0008g0303 a0002c0002t0003g0152 a0002c0002t0003g0153	5	348	0.0144	-30	c.-47 others(49): Show c.-47+18564_-47+18593delATATATATATATATATATATATATAT ATAT		TET2	ENSG00000168769.14	transcript	ENST00000380013.9	protein_coding	2/10					INFO_REALIGN_3_PRIME	chr4	TogoVar
TET2_chr4_105141876_105284803	105284096	GTATATAT others(23): Show GTATATATATATATGTATATATATATACACA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01978.hp2 HG01978.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0321 a0001c0001t0001g0321	1	348	0.0029	-30	c.75 others(41): Show c.7578_*7607delTATATATATATATGTATATATATATACACA		TET2	ENSG00000168769.14	transcript	ENST00000380013.9	protein_coding					4294		chr4	TogoVar
TET2_chr4_105141876_105284803	105284108	ATGTATAT others(23): Show ATGTATATATATATACACATATATATATATT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02572.hp2 HG04184.hp1 NA18941.hp2 HG02572.hp2 HG04184.hp1 NA18941.hp2	a0003 a0004 a0009 a0003 a0004 a0009	a0003c0008 a0004c0003 a0009c0013 a0003c0008 a0004c0003 a0009c0013	a0003c0008t0067 a0004c0003t0002 a0009c0013t0001 a0003c0008t0067 a0004c0003t0002 a0009c0013t0001	a0003c0008t0067g0045 a0004c0003t0002g0082 a0009c0013t0001g0322 a0003c0008t0067g0045 a0004c0003t0002g0082 a0009c0013t0001g0322	3	348	0.0086	-30	c.75 others(41): Show c.7590_*7619delTGTATATATATATACACATATATATATATT		TET2	ENSG00000168769.14	transcript	ENST00000380013.9	protein_coding					4306		chr4	TogoVar
TEX11_chrX_70523940_70913711	70788957	TATATATA others(23): Show TATATATATATATATATAGAGAGAGAGAGAG	T T	intron_variant intron_variant	MODIFIER	NA21309.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0051 a0001c0001t0001g0051	1	229	0.0044	-30	c.692 others(49): Show c.692+17718_692+17747delCTCTCTCTCTCTCTATATATATATAT ATAT		TEX11	ENSG00000120498.14	transcript	ENST00000374333.7	protein_coding	9/29						chrX	TogoVar
TEX11_chrX_70523940_70913711	70792331	TATATATA others(23): Show TATATATATATATATATATATATATATACAC	T T	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02809.hp1 HG02896.hp2 others(2): Show HG01884.hp2 HG02809.hp1 HG02896.hp2 HG03041.hp1 NA19056.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0004t0001 a0001c0001t0001 a0001c0004t0001	a0001c0001t0001g0215 a0001c0004t0001g0044 a0001c0004t0001g0046 others(2): Show a0001c0001t0001g0215 a0001c0004t0001g0044 a0001c0004t0001g0046 a0001c0004t0001g0047 a0001c0004t0001g0049	5	229	0.0218	-30	c.692 others(49): Show c.692+14344_692+14373delGTGTATATATATATATATATATATAT ATAT		TEX11	ENSG00000120498.14	transcript	ENST00000374333.7	protein_coding	9/29						chrX	TogoVar
TEX11_chrX_70523940_70913711	70869036	GTAAAATA others(23): Show GTAAAATAAAATAAAATAAAATAAAATAAAA	G G	intron_variant intron_variant	MODIFIER	HG02698.hp1 NA18962.hp1 HG02698.hp1 NA18962.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0209 a0001c0001t0001g0210 a0001c0001t0001g0209 a0001c0001t0001g0210	2	229	0.0087	-30	c.244 others(47): Show c.244+4157_244+4186delTTTTATTTTATTTTATTTTATTTTATTT TA		TEX11	ENSG00000120498.14	transcript	ENST00000374333.7	protein_coding	4/29						chrX	TogoVar
TEX11_chrX_70523940_70913711	70906080	AAAAAAAA others(23): Show AAAAAAAAAAAATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG03130.hp1 HG03130.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0219 a0001c0001t0001g0219	1	229	0.0044	-30	c.37+ others(45): Show c.37+1643_37+1672delATATATATATATATATATATTTTTTTTTTT		TEX11	ENSG00000120498.14	transcript	ENST00000374333.7	protein_coding	2/29						chrX	TogoVar
TEX14_chr17_58551678_58697045	58563642	TATATATA others(23): Show TATATATATATATATATAGAGAGAGAGAGAG	T T	intron_variant intron_variant	MODIFIER	HG01346.hp1 HG01346.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0280 a0001c0003t0001g0280	1	324	0.0031	-30	c.406 others(49): Show c.4064+1197_4064+1226delCTCTCTCTCTCTCTATATATATATAT ATAT		TEX14	ENSG00000121101.16	transcript	ENST00000349033.10	protein_coding	28/31						chr17	TogoVar
TEX14_chr17_58551678_58697045	58563644	TATATATA others(23): Show TATATATATATATATAGAGAGAGAGAGAGAG	T T	intron_variant intron_variant	MODIFIER	HG04228.hp1 HG04228.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0285 a0001c0003t0001g0285	1	324	0.0031	-30	c.406 others(49): Show c.4064+1195_4064+1224delCTCTCTCTCTCTCTCTATATATATAT ATAT		TEX14	ENSG00000121101.16	transcript	ENST00000349033.10	protein_coding	28/31						chr17	TogoVar

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