Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
TP63_chr3_189784659_189902276	189875589	CATACATA others(23): Show CATACATATATATATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02258.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0016	a0001c0001t0016g0307 a0001c0001t0016g0307	1	398	0.0025	-30	c.106 others(49): Show c.1067+2598_1067+2627delCATATATATATATATATATATATATA TATA	TP63	ENSG00000073282.14	transcript	ENST00000354600.10	protein_coding	8/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
TP73_chr1_3647516_3741201	3703773	CCCTTGCC others(23): Show CCCTTGCCTGTCATCCTGACCTGAGAAGCCT	C C	intron_variant intron_variant	MODIFIER	HG03195.hp2 HG03195.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0024 a0001c0002t0024	a0001c0002t0024g0041 a0001c0002t0024g0041	1	358	0.0028	-30	c.187 others(47): Show c.187-3774_187-3745delCTTGCCTGTCATCCTGACCTGAGAAGCC TC	TP73	ENSG00000078900.16	transcript	ENST00000378295.9	protein_coding	3/13		INFO_REALIGN_3_PRIME	chr1	TogoVar
TPD52L1_chr6_125148773_125269407	125172512	CTATATAT others(23): Show CTATATATATATATATATATATATATATATA	C C	intron_variant intron_variant	MODIFIER	HG00408.hp1 NA18973.hp2 HG00408.hp1 NA18973.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0043 a0001c0001t0001g0048 a0001c0001t0001g0043 a0001c0001t0001g0048	2	320	0.0063	-30	c.19+ others(47): Show c.19+18553_19+18582delTATATATATATATATATATATATATATA TA	TPD52L1	ENSG00000111907.21	transcript	ENST00000534000.6	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr6	TogoVar
TPD52L1_chr6_125148773_125269407	125216525	GTGTGTAT others(23): Show GTGTGTATATATATATATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG03130.hp1 HG02559.hp2 HG03130.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0191 a0001c0001t0001g0193 a0001c0001t0001g0191 a0001c0001t0001g0193	2	320	0.0063	-30	c.20- others(45): Show c.20-3551_20-3522delGTGTATATATATATATATATATATATATAT	TPD52L1	ENSG00000111907.21	transcript	ENST00000534000.6	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr6	TogoVar
TPD52L1_chr6_125148773_125269407	125260952	GAAAGAAA others(23): Show GAAAGAAAGAAAGAAAGAAAGAAAGAAAAGA	G G	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG00597.hp1 HG01070.hp1 others(39): Show HG00558.hp2 HG00597.hp1 HG01070.hp1 HG01074.hp2 HG01099.hp2 HG01109.hp2 HG01255.hp1 HG01256.hp2 HG01258.hp1 HG01934.hp1 HG01975.hp2 HG01993.hp1 HG01993.hp2 HG02055.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp2 HG02257.hp2 HG02258.hp2 HG02622.hp2 HG03017.hp2 HG03239.hp1 HG03453.hp2 HG03471.hp2 HG03486.hp2 HG03492.hp1 HG03669.hp1 HG04199.hp1 NA18522.hp2 NA18747.hp1 NA18906.hp1 NA18944.hp1 NA18951.hp2 NA18973.hp1 NA18980.hp2 NA18983.hp2 NA18995.hp2 NA19043.hp1 NA19055.hp2 NA19066.hp2 NA19240.hp1 NA21309.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0004 a0001c0001 a0003c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0003c0004t0001	a0001c0001t0001g0019 a0001c0001t0001g0063 a0001c0001t0001g0085 others(39): Show a0001c0001t0001g0019 a0001c0001t0001g0063 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0091 a0001c0001t0001g0108 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0123 a0001c0001t0001g0126 a0001c0001t0001g0136 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0156 a0001c0001t0001g0173 a0001c0001t0001g0178 a0001c0001t0001g0181 a0001c0001t0001g0184 a0001c0001t0001g0195 a0001c0001t0001g0206 a0001c0001t0001g0245 a0001c0001t0001g0251 a0001c0001t0001g0252 a0001c0001t0001g0256 a0001c0001t0001g0258 a0001c0001t0001g0259 a0001c0001t0001g0271 a0001c0001t0001g0279 a0001c0001t0001g0294 a0001c0001t0002g0024 a0001c0001t0002g0029 a0001c0001t0002g0054 a0001c0001t0002g0076 a0001c0001t0002g0102 a0001c0001t0002g0112 a0001c0001t0002g0119 a0001c0001t0002g0236 a0001c0001t0002g0311 a0001c0001t0005g0314 a0003c0004t0001g0167	42	320	0.1313	-30	c.487 others(47): Show c.487-1854_487-1825delAGAAAAGAAAGAAAGAAAGAAAGAAAGA AA	TPD52L1	ENSG00000111907.21	transcript	ENST00000534000.6	protein_coding	6/6		INFO_REALIGN_3_PRIME	chr6	TogoVar
TPD52_chr8_80029745_80176564	80072434	TGCGTGTA others(23): Show TGCGTGTATATACATGTACACATAGATATGC	T T	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG03209.hp1 NA19240.hp2 HG02965.hp2 HG03209.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0088 a0001c0001t0001g0106 a0001c0001t0001g0132 a0001c0001t0001g0088 a0001c0001t0001g0106 a0001c0001t0001g0132	3	228	0.0132	-30	c.20- others(45): Show c.20-7871_20-7842delGCATATCTATGTGTACATGTATATACACGC	TPD52	ENSG00000076554.16	transcript	ENST00000518937.6	protein_coding	1/7			chr8	TogoVar
TPD52_chr8_80029745_80176564	80094430	TTATATAT others(23): Show TTATATATATATATATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	NA19068.hp1 NA19068.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0002 a0001c0001t0008g0002	1	228	0.0044	-30	c.20- others(47): Show c.20-29867_20-29838delTATATATATATATATATATATATATATA TA	TPD52	ENSG00000076554.16	transcript	ENST00000518937.6	protein_coding	1/7			chr8	TogoVar
TPGS1_chr19_502497_524654	523257	GGTGAGCA others(23): Show GGTGAGCACGGGCCGGGGGCTCAGCATTTCA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00408.hp2 HG01070.hp2 HG01071.hp2 others(13): Show HG00408.hp2 HG01070.hp2 HG01071.hp2 HG01943.hp1 HG02015.hp2 HG03239.hp2 HG03490.hp2 HG03492.hp2 HG03688.hp1 HG03688.hp2 HG03831.hp1 HG03834.hp2 NA18943.hp2 NA18944.hp2 NA18950.hp1 NA18956.hp2	a0000 a0001 a0000 a0001	a0000c0003 a0001c0001 a0000c0003 a0001c0001	a0000c0003t0002 a0001c0001t0001 a0001c0001t0002 a0000c0003t0002 a0001c0001t0001 a0001c0001t0002	a0000c0003t0002g0038 a0001c0001t0001g0005 a0001c0001t0001g0012 others(10): Show a0000c0003t0002g0038 a0001c0001t0001g0005 a0001c0001t0001g0012 a0001c0001t0002g0016 a0001c0001t0002g0017 a0001c0001t0002g0031 a0001c0001t0002g0039 a0001c0001t0002g0044 a0001c0001t0002g0045 a0001c0001t0002g0097 a0001c0001t0002g0098 a0001c0001t0002g0105 a0001c0001t0002g0180	16	344	0.0465	-30	c.38 others(41): Show c.3835_*3864delGTGAGCACGGGCCGGGGGCTCAGCATTTCA	TPGS1	ENSG00000141933.9	transcript	ENST00000359315.6	protein_coding		3604		chr19	TogoVar
TPH1_chr11_18012555_18051269	18018665	CAAAAAAA others(23): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02647.hp2 HG02647.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0056 a0001c0001t0056	a0001c0001t0056g0252 a0001c0001t0056g0252	1	398	0.0025	-30	c.22 others(41): Show c.2296_*2325delTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	TPH1	ENSG00000129167.10	transcript	ENST00000682019.1	protein_coding	11/11	2296		chr11	TogoVar
TPK1_chr7_144446941_144841053	144716831	TTATTTAT others(23): Show TTATTTATATATATATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG03195.hp1 HG03225.hp2 HG01109.hp1 HG03195.hp1 HG03225.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082	3	118	0.0254	-30	c.116 others(49): Show c.116-33883_116-33854delTATATATATATATATATATATATATA AATA	TPK1	ENSG00000196511.15	transcript	ENST00000360057.7	protein_coding	3/8			chr7	TogoVar
TPM3_chr1_154156813_154197100	154189131	CAAAAAAA others(23): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA20752.hp1 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0023 a0001c0001t0002g0023	1	372	0.0027	-30	c.243 others(47): Show c.243+2025_243+2054delTTTTTTTTTTTTTTTTTTTTTTTTTTTT TT	TPM3	ENSG00000143549.22	transcript	ENST00000651641.1	protein_coding	2/9			chr1	TogoVar
TPO_chr2_1408463_1548673	1533273	TCCCCCCA others(23): Show TCCCCCCACTCTGCACAATCTCCCCAAATCC	T T	intron_variant intron_variant	MODIFIER	HG02040.hp1 NA18962.hp1 HG02040.hp1 NA18962.hp1	a0002 a0006 a0002 a0006	a0002c0002 a0006c0013 a0002c0002 a0006c0013	a0002c0002t0009 a0006c0013t0012 a0002c0002t0009 a0006c0013t0012	a0002c0002t0009g0062 a0006c0013t0012g0067 a0002c0002t0009g0062 a0006c0013t0012g0067	2	130	0.0154	-30	c.261 others(49): Show c.2619-7315_2619-7286delCACTCTGCACAATCTCCCCAAATCCC CCCC	TPO	ENSG00000115705.22	transcript	ENST00000329066.9	protein_coding	15/16		INFO_REALIGN_3_PRIME	chr2	TogoVar
TPRG1_chr3_189166971_189330304	189312093	CTTTGTTT others(23): Show CTTTGTTTCTTTGTTTCTTTCTTTGTTTCTT	C C	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG01358.hp2 HG02622.hp1 others(2): Show HG01069.hp2 HG01358.hp2 HG02622.hp1 HG03486.hp2 HG04204.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0002c0003t0001	a0001c0001t0001g0006 a0001c0001t0002g0021 a0001c0001t0002g0024 others(2): Show a0001c0001t0001g0006 a0001c0001t0002g0021 a0001c0001t0002g0024 a0001c0001t0005g0188 a0002c0003t0001g0176	5	288	0.0174	-30	c.633 others(47): Show c.633+1556_633+1585delTTGTTTCTTTGTTTCTTTCTTTGTTTCT TT	TPRG1	ENSG00000188001.10	transcript	ENST00000345063.8	protein_coding	5/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
TPST2_chr22_26516996_26595132	26569981	AAAAGAAA others(23): Show AAAAGAAAGAAAAAGAAAGAAAGAAAGAAAG	A A	intron_variant intron_variant	MODIFIER	HG02015.hp2 HG02257.hp2 HG02451.hp1 others(11): Show HG02015.hp2 HG02257.hp2 HG02451.hp1 HG02615.hp1 HG03195.hp1 NA19004.hp2 NA19009.hp2 NA19057.hp1 NA19058.hp2 NA19062.hp2 NA19068.hp1 NA19077.hp2 NA19090.hp2 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0001t0017 a0001c0001t0024	a0001c0001t0001g0128 a0001c0001t0002g0312 a0001c0001t0003g0279 others(11): Show a0001c0001t0001g0128 a0001c0001t0002g0312 a0001c0001t0003g0279 a0001c0001t0003g0281 a0001c0001t0003g0282 a0001c0001t0003g0311 a0001c0001t0003g0324 a0001c0001t0003g0336 a0001c0001t0004g0266 a0001c0001t0006g0085 a0001c0001t0006g0278 a0001c0001t0017g0206 a0001c0001t0024g0389 a0001c0001t0024g0390	14	400	0.0350	-30	c.-16 others(51): Show c.-161+20042_-161+20071delCTTTCTTTCTTTCTTTCTTTTTCT TTCTTT	TPST2	ENSG00000128294.16	transcript	ENST00000338754.9	protein_coding	1/6			chr22	TogoVar
TPT1_chr13_45328471_45346183	45339701	AAAAGGCA others(23): Show AAAAGGCAACCAGCTGTTAAGAAATTACTAG	A A	intron_variant intron_variant	MODIFIER	NA19088.hp1 NA19088.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0061 a0001c0001t0004g0061	1	368	0.0027	-30	c.294 others(45): Show c.294-129_294-100delCTAGTAATTTCTTAACAGCTGGTTGCCTTT	TPT1	ENSG00000133112.17	transcript	ENST00000530705.6	protein_coding	3/5			chr13	TogoVar
TPTE_chr21_10516583_10610716	10576838	CATATATA others(23): Show CATATATATATATATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG03098.hp1 HG03098.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0124 a0001c0003t0002g0124	1	209	0.0048	-30	c.796 others(45): Show c.796-612_796-583delTATATATATATATATATATATATATATATA	TPTE	ENSG00000274391.5	transcript	ENST00000618007.5	protein_coding	14/23		INFO_REALIGN_3_PRIME	chr21	TogoVar
TRABD2B_chr1_47755528_48002385	47858204	CTTTATTT others(23): Show CTTTATTTTATTTTATTTTATTTTATTTTAT	C C	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG03098.hp2 NA21309.hp2 HG00438.hp2 HG03098.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0001t0014 a0001c0004t0011 a0001c0001t0001 a0001c0001t0014 a0001c0004t0011	a0001c0001t0001g0181 a0001c0001t0014g0100 a0001c0004t0011g0007 a0001c0001t0001g0181 a0001c0001t0014g0100 a0001c0004t0011g0007	3	244	0.0123	-30	c.667 others(49): Show c.667-56615_667-56586delATAAAATAAAATAAAATAAAATAAAA TAAA	TRABD2B	ENSG00000269113.4	transcript	ENST00000606738.3	protein_coding	2/6			chr1	TogoVar
TRABD2B_chr1_47755528_48002385	47990771	TTATATAT others(23): Show TTATATATATATATATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG04115.hp2 HG02280.hp1 HG04115.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0006 a0001c0001t0004 a0001c0001t0006	a0001c0001t0004g0154 a0001c0001t0006g0075 a0001c0001t0004g0154 a0001c0001t0006g0075	2	244	0.0082	-30	c.666 others(47): Show c.666+3233_666+3262delTATATATATATATATATATATATATATA TA	TRABD2B	ENSG00000269113.4	transcript	ENST00000606738.3	protein_coding	2/6			chr1	TogoVar
TRAF3IP2_chr6_111550381_111610878	111568432	AGTGTGTG others(23): Show AGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG00621.hp2 HG00741.hp1 HG01081.hp1 others(31): Show HG00621.hp2 HG00741.hp1 HG01081.hp1 HG01243.hp2 HG01891.hp2 HG01981.hp1 HG02109.hp1 HG02132.hp1 HG02280.hp1 HG02523.hp1 HG02572.hp2 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02717.hp2 HG02723.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02965.hp1 HG02965.hp2 HG03098.hp2 HG03130.hp1 HG03453.hp1 HG03471.hp1 HG03471.hp2 HG03540.hp2 HG03579.hp1 NA18522.hp2 NA18612.hp2 NA18957.hp1 NA19030.hp1 NA19058.hp2 NA20300.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(14): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0008 a0001c0001t0010 a0001c0001t0011 a0001c0001t0017 a0001c0001t0030 a0001c0001t0058 a0002c0002t0003 a0002c0002t0013 a0002c0002t0017 a0002c0002t0024 a0002c0002t0029 a0002c0002t0038 a0002c0002t0039 a0002c0002t0046	a0001c0001t0001g0009 a0001c0001t0001g0130 a0001c0001t0001g0169 others(27): Show a0001c0001t0001g0009 a0001c0001t0001g0130 a0001c0001t0001g0169 a0001c0001t0001g0229 a0001c0001t0001g0249 a0001c0001t0002g0081 a0001c0001t0002g0137 a0001c0001t0002g0159 a0001c0001t0002g0213 a0001c0001t0003g0224 a0001c0001t0003g0228 a0001c0001t0008g0080 a0001c0001t0010g0019 a0001c0001t0010g0127 a0001c0001t0011g0020 a0001c0001t0011g0241 a0001c0001t0017g0132 a0001c0001t0030g0248 a0001c0001t0058g0082 a0002c0002t0003g0037 a0002c0002t0003g0045 a0002c0002t0003g0048 a0002c0002t0003g0057 a0002c0002t0013g0260 a0002c0002t0017g0042 a0002c0002t0024g0128 a0002c0002t0029g0030 a0002c0002t0038g0036 a0002c0002t0039g0040 a0002c0002t0046g0043	34	316	0.1076	-30	c.129 others(47): Show c.1291-770_1291-741delACACACACACACACACACACACACACAC AC	TRAF3IP2	ENSG00000056972.21	transcript	ENST00000368761.11	protein_coding	5/8			chr6	TogoVar
TRAF3IP3_chr1_209751053_209787310	209765213	GGGAGAGA others(23): Show GGGAGAGAGAGAGAGAGGAAGGAAGGAAGGA	G G	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG03579.hp1 HG03579.hp2 others(2): Show HG01109.hp2 HG03579.hp1 HG03579.hp2 NA18522.hp1 NA18940.hp2	a0001 a0004 a0001 a0004	a0001c0005 a0001c0008 a0004c0014 a0001c0005 a0001c0008 a0004c0014	a0001c0005t0004 a0001c0008t0001 a0004c0014t0003 a0001c0005t0004 a0001c0008t0001 a0004c0014t0003	a0001c0005t0004g0076 a0001c0008t0001g0143 a0004c0014t0003g0024 a0001c0005t0004g0076 a0001c0008t0001g0143 a0004c0014t0003g0024	5	444	0.0113	-30	c.702 others(47): Show c.702+1627_702+1656delGGAGAGAGAGAGAGAGGAAGGAAGGAAG GA	TRAF3IP3	ENSG00000009790.15	transcript	ENST00000367025.8	protein_coding	8/16			chr1	TogoVar
TRAF3_chr14_102772449_102916500	102820592	ATATATAT others(23): Show ATATATATATATATATATATATATTTTTTTT	A A	intron_variant intron_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0011 a0001c0001t0005g0011	1	296	0.0034	-30	c.-15 others(49): Show c.-156-9740_-156-9711delATATATATATATATATATATATTTTT TTTT	TRAF3	ENSG00000131323.17	transcript	ENST00000392745.8	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr14	TogoVar
TRAF3_chr14_102772449_102916500	102820594	ATATATAT others(23): Show ATATATATATATATATATATATTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02809.hp2 HG02886.hp1 others(4): Show HG02055.hp2 HG02809.hp2 HG02886.hp1 HG03130.hp1 HG03195.hp1 HG06807.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0010 a0001c0001t0005 a0001c0001t0010	a0001c0001t0005g0009 a0001c0001t0005g0010 a0001c0001t0005g0013 others(4): Show a0001c0001t0005g0009 a0001c0001t0005g0010 a0001c0001t0005g0013 a0001c0001t0005g0014 a0001c0001t0005g0016 a0001c0001t0005g0017 a0001c0001t0010g0023	7	296	0.0237	-30	c.-15 others(49): Show c.-156-9738_-156-9709delATATATATATATATATATATTTTTTT TTTT	TRAF3	ENSG00000131323.17	transcript	ENST00000392745.8	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr14	TogoVar
TRAF3_chr14_102772449_102916500	102820596	ATATATAT others(23): Show ATATATATATATATATATATTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0008 a0001c0001t0007g0008	1	296	0.0034	-30	c.-15 others(49): Show c.-156-9736_-156-9707delATATATATATATATATATTTTTTTTT TTTT	TRAF3	ENSG00000131323.17	transcript	ENST00000392745.8	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr14	TogoVar
TRAF7_chr16_2150782_2183129	2164155	TGTGTGCG others(23): Show TGTGTGCGCGCGCGCGCGCGCGCGCGCACGC	T T	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG03516.hp1 NA20129.hp1 HG01884.hp2 HG03516.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0063 a0001c0001t0001g0108 a0001c0001t0001g0161 a0001c0001t0001g0063 a0001c0001t0001g0108 a0001c0001t0001g0161	3	320	0.0094	-30	c.81+ others(43): Show c.81+158_81+187delTGCGCGCGCGCGCGCGCGCGCGCACGCGTG	TRAF7	ENSG00000131653.14	transcript	ENST00000326181.11	protein_coding	2/20		INFO_REALIGN_3_PRIME	chr16	TogoVar
TRAK1_chr3_42086357_42230890	42113362	GCCTACGC others(23): Show GCCTACGCCTACCCCTACCCCTACCCCTACC	G G	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG03486.hp2 HG01891.hp2 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0024 a0001c0001 a0001c0024	a0001c0001t0004 a0001c0024t0007 a0001c0001t0004 a0001c0024t0007	a0001c0001t0004g0157 a0001c0024t0007g0156 a0001c0001t0004g0157 a0001c0024t0007g0156	2	288	0.0069	-30	c.92- others(47): Show c.92-12052_92-12023delGCCTACCCCTACCCCTACCCCTACCCCT AC	TRAK1	ENSG00000182606.17	transcript	ENST00000327628.10	protein_coding	1/15		INFO_REALIGN_3_PRIME	chr3	TogoVar
TRAM2_chr6_52492408_52582060	52526148	GACAGACA others(23): Show GACAGACACACACACACACACACACACACAC	G G	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG01167.hp2 HG01169.hp1 others(5): Show HG00741.hp2 HG01167.hp2 HG01169.hp1 HG01884.hp2 HG02258.hp1 HG02559.hp1 HG02809.hp2 HG03098.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0029 a0001c0001t0006 a0001c0001t0029	a0001c0001t0006g0004 a0001c0001t0006g0035 a0001c0001t0006g0036 others(2): Show a0001c0001t0006g0004 a0001c0001t0006g0035 a0001c0001t0006g0036 a0001c0001t0006g0195 a0001c0001t0029g0002	8	378	0.0212	-30	c.185 others(47): Show c.185-9441_185-9412delGTGTGTGTGTGTGTGTGTGTGTGTGTCT GT	TRAM2	ENSG00000065308.5	transcript	ENST00000182527.4	protein_coding	2/10			chr6	TogoVar
TRAPPC2L_chr16_88852127_88867678	88864547	CGTCACGG others(23): Show CGTCACGGCCAGCACCCCTGCAGAGGGGGGG	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00609.hp2 HG00639.hp1 HG00642.hp1 others(65): Show HG00609.hp2 HG00639.hp1 HG00642.hp1 HG01070.hp2 HG01071.hp1 HG01167.hp2 HG01168.hp1 HG01169.hp1 HG01243.hp2 HG01256.hp1 HG01258.hp1 HG01891.hp1 HG01975.hp2 HG01981.hp1 HG01981.hp2 HG02004.hp1 HG02109.hp1 HG02109.hp2 HG02129.hp2 HG02165.hp1 HG02280.hp2 HG02300.hp1 HG02559.hp1 HG02602.hp2 HG02723.hp2 HG02886.hp1 HG02965.hp2 HG02970.hp1 HG03041.hp2 HG03130.hp1 HG03139.hp1 HG03195.hp2 HG03225.hp2 HG04115.hp1 HG04199.hp2 HG04204.hp1 NA18943.hp2 NA18946.hp2 NA18948.hp1 NA18950.hp2 NA18952.hp1 NA18953.hp1 NA18956.hp2 NA18959.hp1 NA18959.hp2 NA18968.hp2 NA18970.hp1 NA18984.hp2 NA18988.hp2 NA18989.hp1 NA18992.hp1 NA18994.hp1 NA18999.hp2 NA19004.hp1 NA19007.hp1 NA19009.hp2 NA19055.hp2 NA19056.hp2 NA19057.hp1 NA19060.hp2 NA19065.hp2 NA19067.hp2 NA19068.hp1 NA19070.hp2 NA19078.hp1 NA19091.hp1 NA20300.hp2 NA21309.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0002 a0002c0003 others(1): Show a0001c0001 a0001c0002 a0002c0003 a0003c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0009 a0001c0001t0020 a0001c0002t0001 a0002c0003t0014 a0003c0004t0001	a0001c0001t0001g0001 a0001c0001t0002g0002 a0001c0001t0002g0004 others(7): Show a0001c0001t0001g0001 a0001c0001t0002g0002 a0001c0001t0002g0004 a0001c0001t0003g0027 a0001c0001t0004g0007 a0001c0001t0009g0010 a0001c0001t0020g0002 a0001c0002t0001g0001 a0002c0003t0014g0019 a0003c0004t0001g0001	68	450	0.1511	-30	c.35 others(41): Show c.3589_*3618delGTCACGGCCAGCACCCCTGCAGAGGGGGGG	TRAPPC2L	ENSG00000167515.11	transcript	ENST00000696289.1	protein_coding		1870		chr16	TogoVar
TRAPPC3L_chr6_116489989_116550684	116516660	AATATATA others(23): Show AATATATATATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02602.hp2 HG02602.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0291 a0001c0001t0001g0291	1	360	0.0028	-30	c.241 others(49): Show c.241-16024_241-15995delATATATATATATATATATATATATAT ATAT	TRAPPC3L	ENSG00000173626.10	transcript	ENST00000368602.4	protein_coding	3/4			chr6	TogoVar
TRAPPC3L_chr6_116489989_116550684	116530902	CATATATA others(23): Show CATATATATATATATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG02647.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0107 a0001c0002t0003g0107	1	360	0.0028	-30	c.240 others(47): Show c.240+9431_240+9460delATATATATATATATATATATATATATAT AT	TRAPPC3L	ENSG00000173626.10	transcript	ENST00000368602.4	protein_coding	3/4			chr6	TogoVar
TRARG1_chr17_1274662_1305978	1282236	GTATATGC others(23): Show GTATATGCACGTATATGTACGTATATGTACA	G G	intron_variant intron_variant	MODIFIER	HG01891.hp2 NA19043.hp1 HG01891.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0116 a0001c0001t0003g0117 a0001c0001t0003g0116 a0001c0001t0003g0117	2	402	0.0050	-30	c.387 others(47): Show c.387+1868_387+1897delGTATATGTACATATATGCACGTATATGT AC	TRARG1	ENSG00000184811.4	transcript	ENST00000333813.4	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr17	TogoVar
TRDN_chr6_123211339_123641950	123266387	TATTATGA others(23): Show TATTATGATATGTATTATATATAATATATAG	T T	intron_variant intron_variant	MODIFIER	HG02922.hp2 HG02922.hp2	a0024 a0024	a0024c0032 a0024c0032	a0024c0032t0011 a0024c0032t0011	a0024c0032t0011g0100 a0024c0032t0011g0100	1	152	0.0066	-30	c.178 others(49): Show c.1784-1079_1784-1050delCTATATATTATATATAATACATATCA TAAT	TRDN	ENSG00000186439.15	transcript	ENST00000334268.9	protein_coding	32/40			chr6	TogoVar
TREML1_chr6_41144337_41159347	41155289	AGCAAACA others(23): Show AGCAAACATACCTTGAGTGCAACGTCCAGAG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01255.hp2 HG01255.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	292	0.0034	-30	c.-10 others(41): Show c.-1031_-1002delCTCTGGACGTTGCACTCAAGGTATGTTTGC	TREML1	ENSG00000161911.12	transcript	ENST00000426005.7	protein_coding		943		chr6	TogoVar
TRERF1_chr6_42219931_42456926	42408226	TATGTGTG others(23): Show TATGTGTGTGTGTATGTATATATACATACAC	T T	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02922.hp1 HG03139.hp1 others(5): Show HG02258.hp1 HG02922.hp1 HG03139.hp1 HG03453.hp1 HG06807.hp1 NA18943.hp1 NA18946.hp1 NA18964.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0001c0005 a0001c0009 others(2): Show a0001c0001 a0001c0005 a0001c0009 a0002c0013 a0004c0012	a0001c0001t0001 a0001c0001t0003 a0001c0001t0049 others(4): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0049 a0001c0005t0001 a0001c0009t0002 a0002c0013t0017 a0004c0012t0023	a0001c0001t0001g0044 a0001c0001t0001g0075 a0001c0001t0003g0043 others(5): Show a0001c0001t0001g0044 a0001c0001t0001g0075 a0001c0001t0003g0043 a0001c0001t0049g0001 a0001c0005t0001g0096 a0001c0009t0002g0006 a0002c0013t0017g0005 a0004c0012t0023g0161	8	180	0.0444	-30	c.-45 others(51): Show c.-454+42921_-454+42950delGTGTATGTATATATACATACACAC ACACAT	TRERF1	ENSG00000124496.13	transcript	ENST00000695948.1	protein_coding	2/17			chr6	TogoVar
TRIM13_chr13_49992042_50023467	50015092	AAAATATA others(23): Show AAAATATATATATATATATATATATATATAT	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01169.hp2 HG02572.hp2 HG01169.hp2 HG02572.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0101 a0001c0001t0130 a0001c0001t0101 a0001c0001t0130	a0001c0001t0101g0064 a0001c0001t0130g0086 a0001c0001t0101g0064 a0001c0001t0130g0086	2	390	0.0051	-30	c.19 others(41): Show c.1930_*1959delAATATATATATATATATATATATATATATA	TRIM13	ENSG00000204977.10	transcript	ENST00000378182.4	protein_coding	2/2	1930	INFO_REALIGN_3_PRIME	chr13	TogoVar
TRIM14_chr9_98079353_98124222	98111183	TGGTGAAT others(23): Show TGGTGAATGATGGATGGATGAATGAATAATG	T T	intron_variant intron_variant	MODIFIER	HG02165.hp1 HG02165.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0048 a0001c0001t0002g0048	1	352	0.0028	-30	c.208 others(47): Show c.208-1229_208-1200delCATTATTCATTCATCCATCCATCATTCA CC	TRIM14	ENSG00000106785.15	transcript	ENST00000341469.7	protein_coding	1/5			chr9	TogoVar
TRIM42_chr3_140673064_140706150	140690531	GTATATAT others(23): Show GTATATATATATATATATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG01074.hp1 HG01243.hp1 HG00140.hp1 HG01074.hp1 HG01243.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0001c0001t0001 a0002c0002t0001	a0001c0001t0001g0231 a0002c0002t0001g0153 a0002c0002t0001g0154 a0001c0001t0001g0231 a0002c0002t0001g0153 a0002c0002t0001g0154	3	410	0.0073	-30	c.186 others(47): Show c.1861-411_1861-382delATATATATATATATATATATATATATAT AT	TRIM42	ENSG00000155890.4	transcript	ENST00000286349.4	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr3	TogoVar
TRIM45_chr1_117106060_117126749	117124333	TCTTTTTA others(23): Show TCTTTTTATAACCATCACCACCGATTTATTC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18957.hp1 NA18957.hp1	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0001 a0004c0004t0001	a0004c0004t0001g0003 a0004c0004t0001g0003	1	354	0.0028	-30	c.-31 others(41): Show c.-3162_-3133delGAATAAATCGGTGGTGATGGTTATAAAAAG	TRIM45	ENSG00000134253.10	transcript	ENST00000256649.9	protein_coding		2585		chr1	TogoVar
TRIM55_chr8_66122129_66180485	66158141	CCACACAC others(23): Show CCACACACACACACACACACACACACACACA	C C	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02572.hp1 HG02717.hp2 others(2): Show HG02451.hp2 HG02572.hp1 HG02717.hp2 HG06807.hp1 NA18522.hp1	a0002 a0004 a0002 a0004	a0002c0002 a0004c0007 a0002c0002 a0004c0007	a0002c0002t0001 a0004c0007t0001 a0002c0002t0001 a0004c0007t0001	a0002c0002t0001g0049 a0002c0002t0001g0051 a0002c0002t0001g0052 others(2): Show a0002c0002t0001g0049 a0002c0002t0001g0051 a0002c0002t0001g0052 a0002c0002t0001g0053 a0004c0007t0001g0054	5	248	0.0202	-30	c.152 others(49): Show c.1524+3839_1524+3868delACACACACACACACACACACACACAC ACAC	TRIM55	ENSG00000147573.17	transcript	ENST00000315962.9	protein_coding	9/9		INFO_REALIGN_3_PRIME	chr8	TogoVar
TRIM56_chr7_101080481_101102967	101082640	ATTATTTT others(23): Show ATTATTTTTAAATTTCTGCCTCAATGTTAAC	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18991.hp1 NA18991.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0005 a0001c0003t0005	a0001c0003t0005g0003 a0001c0003t0005g0003	1	420	0.0024	-30	c.-30 others(41): Show c.-3095_-3066delTTATTTTTAAATTTCTGCCTCAATGTTAAC	TRIM56	ENSG00000169871.13	transcript	ENST00000306085.11	protein_coding		2840		chr7	TogoVar
TRIM58_chr1_247852187_247885138	247852906	CACACACA others(23): Show CACACACACACACAGAGAGAGAGAGAGAGAG	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01884.hp2 HG02258.hp1 HG02970.hp1 others(6): Show HG01884.hp2 HG02258.hp1 HG02970.hp1 HG03130.hp1 HG03195.hp1 HG03486.hp2 NA18906.hp2 NA19030.hp2 NA20129.hp1	a0002 a0006 a0002 a0006	a0002c0006 a0006c0010 a0002c0006 a0006c0010	a0002c0006t0001 a0006c0010t0001 a0006c0010t0012 a0002c0006t0001 a0006c0010t0001 a0006c0010t0012	a0002c0006t0001g0054 a0006c0010t0001g0026 a0006c0010t0001g0054 others(5): Show a0002c0006t0001g0054 a0006c0010t0001g0026 a0006c0010t0001g0054 a0006c0010t0001g0055 a0006c0010t0001g0220 a0006c0010t0001g0224 a0006c0010t0012g0055 a0006c0010t0012g0223	9	454	0.0198	-30	c.-43 others(41): Show c.-4340_-4311delACACACACACACAGAGAGAGAGAGAGAGAG	TRIM58	ENSG00000162722.9	transcript	ENST00000366481.4	protein_coding		4280		chr1	TogoVar
TRIM58_chr1_247852187_247885138	247852908	CACACACA others(23): Show CACACACACACAGAGAGAGAGAGAGAGAGAG	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01123.hp1 HG02602.hp1 HG01123.hp1 HG02602.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0002 a0001c0001 a0003c0002	a0001c0001t0018 a0003c0002t0002 a0001c0001t0018 a0003c0002t0002	a0001c0001t0018g0012 a0003c0002t0002g0113 a0001c0001t0018g0012 a0003c0002t0002g0113	2	454	0.0044	-30	c.-43 others(41): Show c.-4338_-4309delACACACACACAGAGAGAGAGAGAGAGAGAG	TRIM58	ENSG00000162722.9	transcript	ENST00000366481.4	protein_coding		4278		chr1	TogoVar
TRIM58_chr1_247852187_247885138	247852910	CACACACA others(23): Show CACACACACAGAGAGAGAGAGAGAGAGAGAG	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00738.hp2 HG01952.hp2 HG01978.hp1 HG00738.hp2 HG01952.hp2 HG01978.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0018 a0001c0001t0018	a0001c0001t0018g0012 a0001c0001t0018g0012	3	454	0.0066	-30	c.-43 others(41): Show c.-4336_-4307delACACACACAGAGAGAGAGAGAGAGAGAGAG	TRIM58	ENSG00000162722.9	transcript	ENST00000366481.4	protein_coding		4276		chr1	TogoVar
TRIM5_chr11_5658195_5690074	5661041	CAAAAAAA others(23): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02004.hp2 HG02004.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0006 a0003c0003t0006	a0003c0003t0006g0148 a0003c0003t0006g0148	1	446	0.0022	-30	c.37 others(41): Show c.3738_*3767delTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	TRIM5	ENSG00000132256.20	transcript	ENST00000380034.8	protein_coding		2153		chr11	TogoVar
TRIM75_chr4_165048866_165065554	165061837	ATATATAT others(23): Show ATATATATATATATATATATATATTTTTTTT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01358.hp1 HG02738.hp2 NA18977.hp1 others(3): Show HG01358.hp1 HG02738.hp2 NA18977.hp1 NA19001.hp1 NA19002.hp1 NA19003.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0007 others(2): Show a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0007 a0001c0001t0001g0037 a0001c0001t0001g0143	6	424	0.0142	-30	c.12 others(41): Show c.1284_*1313delTATATATATATATATATATATATTTTTTTT	TRIM75	ENSG00000250374.5	transcript	ENST00000503032.3	protein_coding		1284		chr4	TogoVar
TRIM75_chr4_165048866_165065554	165061839	ATATATAT others(23): Show ATATATATATATATATATATATTTTTTTTTT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01070.hp1 HG01070.hp2 HG01081.hp2 others(13): Show HG01070.hp1 HG01070.hp2 HG01081.hp2 HG01109.hp2 HG01167.hp2 HG01169.hp2 HG01243.hp1 HG01258.hp1 HG01952.hp2 HG01975.hp1 NA18747.hp1 NA18962.hp2 NA18969.hp1 NA18969.hp2 NA19054.hp2 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0007 others(9): Show a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0007 a0001c0001t0001g0011 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0058 a0001c0001t0001g0075 a0001c0001t0001g0121 a0001c0001t0001g0137 a0001c0001t0001g0145 a0001c0001t0001g0161	16	424	0.0377	-30	c.12 others(41): Show c.1286_*1315delTATATATATATATATATATATTTTTTTTTT	TRIM75	ENSG00000250374.5	transcript	ENST00000503032.3	protein_coding		1286		chr4	TogoVar
TRIM75_chr4_165048866_165065554	165061841	ATATATAT others(23): Show ATATATATATATATATATATTTTTTTTTTTT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00544.hp2 HG00544.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0150 a0001c0001t0001g0150	1	424	0.0024	-30	c.12 others(41): Show c.1288_*1317delTATATATATATATATATATTTTTTTTTTTT	TRIM75	ENSG00000250374.5	transcript	ENST00000503032.3	protein_coding		1288		chr4	TogoVar
TRIOBP_chr22_37692048_37781556	37704381	TCAGAACA others(23): Show TCAGAACAGAACAGAACAGAACAGAACAGAA	T T	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp2 others(188): Show HG00099.hp1 HG00099.hp2 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00558.hp2 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00735.hp2 HG00738.hp1 HG01071.hp1 HG01074.hp2 HG01081.hp2 HG01099.hp2 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01243.hp1 HG01255.hp2 HG01257.hp1 HG01261.hp2 HG01361.hp2 HG01433.hp2 HG01496.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01891.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01952.hp1 HG01952.hp2 HG01981.hp2 HG01993.hp2 HG02027.hp1 HG02055.hp1 HG02074.hp1 HG02074.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02148.hp1 HG02148.hp2 HG02257.hp2 HG02293.hp2 HG02300.hp2 HG02523.hp2 HG02559.hp1 HG02602.hp1 HG02615.hp1 HG02630.hp2 HG02647.hp2 HG02735.hp2 HG02809.hp1 HG02895.hp1 HG03139.hp1 HG03209.hp1 HG03239.hp2 HG03453.hp2 HG03486.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03669.hp1 HG03704.hp1 HG03704.hp2 HG03831.hp1 HG03831.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp2 HG04228.hp1 HG04228.hp2 NA18522.hp2 NA18747.hp1 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18942.hp1 NA18942.hp2 NA18945.hp1 NA18945.hp2 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18955.hp1 NA18955.hp2 NA18956.hp1 NA18956.hp2 NA18960.hp1 NA18960.hp2 NA18962.hp1 NA18962.hp2 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18965.hp2 NA18966.hp1 NA18966.hp2 NA18973.hp1 NA18973.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp2 NA18985.hp1 NA18985.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18993.hp1 NA18993.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19004.hp1 NA19004.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp1 NA19030.hp2 NA19063.hp1 NA19063.hp2 NA19066.hp1 NA19066.hp2 NA19074.hp1 NA19074.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19081.hp1 NA19081.hp2 NA19083.hp1 NA19083.hp2 NA19087.hp1 NA19087.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp2 NA20752.hp2 NA20805.hp1 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(31): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007 a0010 a0011 a0012 a0015 a0017 a0019 a0020 a0021 a0022 a0023 a0026 a0029 a0030 a0031 a0036 a0037 a0038 a0039 a0041 a0043 a0044 a0046 a0047 a0048 a0049 a0050 a0058	a0001c0002 a0001c0005 a0001c0010 others(38): Show a0001c0002 a0001c0005 a0001c0010 a0001c0021 a0002c0001 a0002c0052 a0002c0056 a0002c0057 a0003c0003 a0004c0004 a0005c0006 a0006c0007 a0006c0035 a0007c0008 a0010c0012 a0011c0011 a0012c0009 a0015c0018 a0017c0020 a0019c0022 a0020c0024 a0021c0027 a0022c0025 a0023c0026 a0026c0029 a0029c0069 a0030c0047 a0031c0046 a0036c0038 a0037c0039 a0038c0041 a0039c0037 a0041c0044 a0043c0048 a0044c0068 a0046c0050 a0047c0053 a0048c0054 a0049c0055 a0050c0051 a0058c0032	a0001c0002t0001 a0001c0002t0004 a0001c0002t0007 others(67): Show a0001c0002t0001 a0001c0002t0004 a0001c0002t0007 a0001c0002t0008 a0001c0002t0012 a0001c0002t0014 a0001c0002t0018 a0001c0002t0025 a0001c0002t0038 a0001c0002t0039 a0001c0002t0040 a0001c0002t0049 a0001c0002t0059 a0001c0002t0060 a0001c0005t0001 a0001c0005t0004 a0001c0005t0010 a0001c0005t0019 a0001c0010t0007 a0001c0021t0001 a0002c0001t0002 a0002c0001t0003 a0002c0001t0028 a0002c0001t0029 a0002c0001t0030 a0002c0001t0042 a0002c0001t0047 a0002c0001t0048 a0002c0001t0054 a0002c0001t0061 a0002c0001t0063 a0002c0001t0064 a0002c0001t0065 a0002c0052t0001 a0002c0056t0003 a0002c0057t0029 a0003c0003t0008 a0004c0004t0011 a0005c0006t0005 a0006c0007t0001 a0006c0035t0001 a0007c0008t0003 a0010c0012t0001 a0011c0011t0001 a0011c0011t0010 a0012c0009t0001 a0015c0018t0004 a0017c0020t0001 a0019c0022t0004 a0020c0024t0002 a0021c0027t0003 a0022c0025t0003 a0023c0026t0002 a0026c0029t0002 a0029c0069t0001 a0030c0047t0004 a0031c0046t0004 a0036c0038t0001 a0037c0039t0025 a0038c0041t0001 a0039c0037t0001 a0041c0044t0002 a0043c0048t0003 a0044c0068t0062 a0046c0050t0003 a0047c0053t0002 a0048c0054t0030 a0049c0055t0003 a0050c0051t0002 a0058c0032t0044	a0001c0002t0001g0011 a0001c0002t0001g0012 a0001c0002t0001g0015 others(187): Show a0001c0002t0001g0011 a0001c0002t0001g0012 a0001c0002t0001g0015 a0001c0002t0001g0017 a0001c0002t0001g0031 a0001c0002t0001g0044 a0001c0002t0001g0046 a0001c0002t0001g0048 a0001c0002t0001g0049 a0001c0002t0001g0051 a0001c0002t0001g0058 a0001c0002t0001g0060 a0001c0002t0001g0061 a0001c0002t0001g0069 a0001c0002t0001g0072 a0001c0002t0001g0074 a0001c0002t0001g0075 a0001c0002t0001g0085 a0001c0002t0001g0086 a0001c0002t0001g0088 a0001c0002t0001g0089 a0001c0002t0001g0121 a0001c0002t0001g0123 a0001c0002t0001g0137 a0001c0002t0001g0148 a0001c0002t0001g0149 a0001c0002t0001g0151 a0001c0002t0004g0019 a0001c0002t0004g0043 a0001c0002t0004g0063 a0001c0002t0007g0001 a0001c0002t0007g0026 a0001c0002t0007g0028 a0001c0002t0007g0103 a0001c0002t0007g0105 a0001c0002t0007g0117 a0001c0002t0008g0004 a0001c0002t0008g0156 a0001c0002t0008g0157 a0001c0002t0008g0158 a0001c0002t0008g0199 a0001c0002t0008g0200 a0001c0002t0008g0211 a0001c0002t0012g0053 a0001c0002t0014g0052 a0001c0002t0014g0062 a0001c0002t0014g0067 a0001c0002t0014g0146 a0001c0002t0018g0024 a0001c0002t0018g0025 a0001c0002t0025g0101 a0001c0002t0038g0126 a0001c0002t0039g0077 a0001c0002t0040g0057 a0001c0002t0049g0055 a0001c0002t0059g0005 a0001c0002t0060g0206 a0001c0005t0001g0064 a0001c0005t0001g0065 a0001c0005t0001g0122 a0001c0005t0004g0054 a0001c0005t0004g0056 a0001c0005t0010g0032 a0001c0005t0010g0120 a0001c0005t0010g0136 a0001c0005t0019g0104 a0001c0005t0019g0106 a0001c0005t0019g0107 a0001c0010t0007g0001 a0001c0010t0007g0027 a0001c0010t0007g0029 a0001c0021t0001g0033 a0001c0021t0001g0131 a0002c0001t0002g0008 a0002c0001t0002g0014 a0002c0001t0002g0018 a0002c0001t0002g0021 a0002c0001t0002g0023 a0002c0001t0002g0030 a0002c0001t0002g0034 a0002c0001t0002g0035 a0002c0001t0002g0036 a0002c0001t0002g0039 a0002c0001t0002g0040 a0002c0001t0002g0076 a0002c0001t0002g0079 a0002c0001t0002g0081 a0002c0001t0002g0082 a0002c0001t0002g0084 a0002c0001t0002g0090 a0002c0001t0002g0091 a0002c0001t0002g0092 a0002c0001t0002g0094 a0002c0001t0002g0095 a0002c0001t0002g0096 a0002c0001t0002g0097 a0002c0001t0002g0098 a0002c0001t0002g0099 a0002c0001t0002g0100 a0002c0001t0002g0102 a0002c0001t0002g0112 a0002c0001t0002g0113 a0002c0001t0002g0114 a0002c0001t0002g0115 a0002c0001t0002g0118 a0002c0001t0002g0119 a0002c0001t0002g0130 a0002c0001t0002g0133 a0002c0001t0002g0134 a0002c0001t0002g0139 a0002c0001t0002g0150 a0002c0001t0003g0159 a0002c0001t0003g0160 a0002c0001t0003g0180 a0002c0001t0003g0183 a0002c0001t0003g0190 a0002c0001t0003g0192 a0002c0001t0003g0195 a0002c0001t0003g0196 a0002c0001t0003g0202 a0002c0001t0003g0204 a0002c0001t0003g0205 a0002c0001t0003g0208 a0002c0001t0003g0210 a0002c0001t0003g0215 a0002c0001t0028g0209 a0002c0001t0028g0213 a0002c0001t0029g0187 a0002c0001t0030g0198 a0002c0001t0042g0016 a0002c0001t0047g0009 a0002c0001t0048g0093 a0002c0001t0054g0042 a0002c0001t0061g0186 a0002c0001t0063g0181 a0002c0001t0064g0164 a0002c0001t0065g0191 a0002c0052t0001g0142 a0002c0056t0003g0194 a0002c0057t0029g0182 a0003c0003t0008g0207 a0004c0004t0011g0007 a0005c0006t0005g0116 a0006c0007t0001g0066 a0006c0007t0001g0132 a0006c0035t0001g0073 a0007c0008t0003g0161 a0007c0008t0003g0162 a0007c0008t0003g0163 a0007c0008t0003g0239 a0010c0012t0001g0128 a0010c0012t0001g0144 a0010c0012t0001g0145 a0011c0011t0001g0010 a0011c0011t0010g0045 a0011c0011t0010g0140 a0012c0009t0001g0020 a0012c0009t0001g0068 a0012c0009t0001g0078 a0015c0018t0004g0070 a0015c0018t0004g0071 a0017c0020t0001g0125 a0017c0020t0001g0127 a0019c0022t0004g0002 a0020c0024t0002g0080 a0020c0024t0002g0135 a0021c0027t0003g0185 a0021c0027t0003g0203 a0022c0025t0003g0201 a0022c0025t0003g0212 a0023c0026t0002g0038 a0023c0026t0002g0041 a0026c0029t0002g0037 a0026c0029t0002g0147 a0029c0069t0001g0129 a0030c0047t0004g0087 a0031c0046t0004g0050 a0036c0038t0001g0047 a0037c0039t0025g0141 a0038c0041t0001g0124 a0039c0037t0001g0059 a0041c0044t0002g0006 a0043c0048t0003g0197 a0044c0068t0062g0188 a0046c0050t0003g0184 a0047c0053t0002g0022 a0048c0054t0030g0193 a0049c0055t0003g0189 a0050c0051t0002g0083 a0058c0032t0044g0108	191	322	0.5932	-30	c.114 others(47): Show c.114+2931_114+2960delAACAGAACAGAACAGAACAGAACAGAAC AG	TRIOBP	ENSG00000100106.22	transcript	ENST00000644935.1	protein_coding	3/23		INFO_REALIGN_3_PRIME	chr22	TogoVar
TRIO_chr5_14138342_14515204	14511663	CTCTCTCT others(23): Show CTCTCTCTCTCTCTCTATATATATATATATA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02523.hp1 HG02523.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0093 a0001c0001t0002g0093	1	198	0.0051	-30	c.32 others(41): Show c.3242_*3271delTCTCTCTCTCTCTCTATATATATATATATA	TRIO	ENSG00000038382.23	transcript	ENST00000344204.9	protein_coding		1460		chr5	TogoVar
TRIO_chr5_14138342_14515204	14511669	CTCTCTCT others(23): Show CTCTCTCTCTATATATATATATATATATATA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02280.hp1 HG02280.hp1	a0002 a0002	a0002c0039 a0002c0039	a0002c0039t0003 a0002c0039t0003	a0002c0039t0003g0188 a0002c0039t0003g0188	1	198	0.0051	-30	c.32 others(41): Show c.3248_*3277delTCTCTCTCTATATATATATATATATATATA	TRIO	ENSG00000038382.23	transcript	ENST00000344204.9	protein_coding		1466		chr5	TogoVar
TRIO_chr5_14138342_14515204	14511673	CTCTCTAT others(23): Show CTCTCTATATATATATATATATATATATATA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01358.hp1 HG02451.hp2 HG01358.hp1 HG02451.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0002 a0001c0005t0002	a0001c0005t0002g0168 a0001c0005t0002g0172 a0001c0005t0002g0168 a0001c0005t0002g0172	2	198	0.0101	-30	c.32 others(41): Show c.3252_*3281delTCTCTATATATATATATATATATATATATA	TRIO	ENSG00000038382.23	transcript	ENST00000344204.9	protein_coding		1470		chr5	TogoVar

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