Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
PIGX_chr3_196707377_196741007	196732241	TATATATA others(23): Show TATATATATATATATATTTTATTTTATTTTA	T T	intron_variant intron_variant	MODIFIER	HG02135.hp2 NA18942.hp2 NA19075.hp2 HG02135.hp2 NA18942.hp2 NA19075.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0008 a0001c0001t0014 a0001c0001t0006 a0001c0001t0008 a0001c0001t0014	a0001c0001t0006g0204 a0001c0001t0008g0213 a0001c0001t0014g0167 a0001c0001t0006g0204 a0001c0001t0008g0213 a0001c0001t0014g0167	3	416	0.0072	-30	c.633 others(47): Show c.633+1150_633+1179delATATATATATATATATTTTATTTTATTT TA	PIGX	ENSG00000163964.18	transcript	ENST00000392391.9	protein_coding	5/5			chr3	TogoVar
PIGZ_chr3_196941356_196973833	196948883	TCCTTCCC others(23): Show TCCTTCCCCTTCCTTCCCTTCCCCTCCCCTC	T T	intron_variant intron_variant	MODIFIER	HG03225.hp2 NA18522.hp2 HG03225.hp2 NA18522.hp2	a0004 a0008 a0004 a0008	a0004c0043 a0008c0051 a0004c0043 a0008c0051	a0004c0043t0001 a0008c0051t0001 a0004c0043t0001 a0008c0051t0001	a0004c0043t0001g0100 a0008c0051t0001g0238 a0004c0043t0001g0100 a0008c0051t0001g0238	2	424	0.0047	-30	c.212 others(45): Show c.212-228_212-199delGAGGGGAGGGGAAGGGAAGGAAGGGGAAGG	PIGZ	ENSG00000119227.8	transcript	ENST00000412723.6	protein_coding	2/2			chr3	TogoVar
PIK3C2A_chr11_17081575_17212986	17181603	AATATATA others(23): Show AATATATATATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG02083.hp1 HG02738.hp2 others(11): Show HG00735.hp2 HG02083.hp1 HG02738.hp2 HG03017.hp1 NA18943.hp2 NA18948.hp2 NA19002.hp1 NA19012.hp1 NA19060.hp2 NA19070.hp2 NA19077.hp2 NA19078.hp1 NA19080.hp1 NA19087.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0004 a0001c0001 a0001c0002 a0002c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0002t0023 a0002c0004t0006	a0001c0001t0001g0168 a0001c0001t0002g0112 a0001c0001t0002g0120 others(11): Show a0001c0001t0001g0168 a0001c0001t0002g0112 a0001c0001t0002g0120 a0001c0001t0002g0128 a0001c0001t0002g0149 a0001c0001t0002g0155 a0001c0001t0002g0163 a0001c0001t0002g0164 a0001c0001t0002g0165 a0001c0001t0002g0166 a0001c0001t0002g0195 a0001c0001t0003g0078 a0001c0002t0023g0202 a0002c0004t0006g0317	14	342	0.0409	-30	c.-65 others(49): Show c.-65-11827_-65-11798delATATATATATATATATATATATATAT ATAT	PIK3C2A	ENSG00000011405.14	transcript	ENST00000691414.1	protein_coding	1/32			chr11	TogoVar
PIK3C2A_chr11_17081575_17212986	17209601	CTTTCTTT others(23): Show CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18971.hp2 NA18971.hp2	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0006 a0002c0004t0006	a0002c0004t0006g0316 a0002c0004t0006g0316	1	342	0.0029	-30	c.-18 others(41): Show c.-1849_-1820delAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	PIK3C2A	ENSG00000011405.14	transcript	ENST00000691414.1	protein_coding		1616		chr11	TogoVar
PIK3C2B_chr1_204417633_204499805	204444846	CACAGTAT others(23): Show CACAGTATTTTATATAAGCCAATAAACCTTG	C C	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01081.hp2	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0002 a0001c0007t0002	a0001c0007t0002g0209 a0001c0007t0002g0209	1	302	0.0033	-30	c.267 others(47): Show c.2679-452_2679-423delCAAGGTTTATTGGCTTATATAAAATACT GT	PIK3C2B	ENSG00000133056.14	transcript	ENST00000684373.1	protein_coding	16/32			chr1	TogoVar
PIK3C2B_chr1_204417633_204499805	204456878	ACACACAC others(23): Show ACACACACACACACACACACACACACACACC	A A	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG02074.hp1 HG02155.hp1 others(21): Show HG00408.hp2 HG02074.hp1 HG02155.hp1 HG02523.hp1 HG03927.hp2 HG04204.hp2 NA18747.hp1 NA18944.hp2 NA18949.hp1 NA18952.hp2 NA18957.hp2 NA18959.hp2 NA18966.hp1 NA18967.hp2 NA18974.hp2 NA18977.hp2 NA18989.hp1 NA18995.hp2 NA19002.hp2 NA19004.hp2 NA19007.hp2 NA19012.hp2 NA19057.hp2 NA19064.hp1	a0001 a0001	a0001c0004 a0001c0009 a0001c0040 others(1): Show a0001c0004 a0001c0009 a0001c0040 a0001c0041	a0001c0004t0002 a0001c0004t0004 a0001c0004t0005 others(7): Show a0001c0004t0002 a0001c0004t0004 a0001c0004t0005 a0001c0004t0006 a0001c0009t0001 a0001c0009t0002 a0001c0009t0004 a0001c0009t0015 a0001c0040t0004 a0001c0041t0002	a0001c0004t0002g0139 a0001c0004t0004g0126 a0001c0004t0004g0138 others(21): Show a0001c0004t0002g0139 a0001c0004t0004g0126 a0001c0004t0004g0138 a0001c0004t0004g0159 a0001c0004t0004g0244 a0001c0004t0005g0276 a0001c0004t0005g0280 a0001c0004t0005g0281 a0001c0004t0005g0282 a0001c0004t0005g0284 a0001c0004t0005g0285 a0001c0004t0005g0286 a0001c0004t0005g0287 a0001c0004t0005g0288 a0001c0004t0005g0290 a0001c0004t0005g0291 a0001c0004t0006g0292 a0001c0009t0001g0131 a0001c0009t0001g0132 a0001c0009t0002g0196 a0001c0009t0004g0212 a0001c0009t0015g0124 a0001c0040t0004g0115 a0001c0041t0002g0152	24	302	0.0795	-30	c.174 others(47): Show c.1747+129_1747+158delGGTGTGTGTGTGTGTGTGTGTGTGTGTG TG	PIK3C2B	ENSG00000133056.14	transcript	ENST00000684373.1	protein_coding	10/32			chr1	TogoVar
PIK3C2G_chr12_18256518_18653416	18369494	TGATCATA others(23): Show TGATCATATAACGATCGTATAATTGACATAC	T T	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02630.hp2 HG02683.hp2 others(2): Show HG02145.hp1 HG02630.hp2 HG02683.hp2 HG02896.hp2 HG03209.hp2	a0001 a0002 a0006 others(2): Show a0001 a0002 a0006 a0009 a0010	a0001c0031 a0002c0032 a0006c0022 others(2): Show a0001c0031 a0002c0032 a0006c0022 a0009c0044 a0010c0013	a0001c0031t0001 a0002c0032t0003 a0006c0022t0002 others(2): Show a0001c0031t0001 a0002c0032t0003 a0006c0022t0002 a0009c0044t0002 a0010c0013t0001	a0001c0031t0001g0059 a0002c0032t0003g0146 a0006c0022t0002g0078 others(2): Show a0001c0031t0001g0059 a0002c0032t0003g0146 a0006c0022t0002g0078 a0009c0044t0002g0080 a0010c0013t0001g0001	5	176	0.0284	-30	c.174 others(49): Show c.1749-1656_1749-1627delCGATCATATAACGATCGTATAATTGA CATA	PIK3C2G	ENSG00000139144.11	transcript	ENST00000538779.6	protein_coding	12/32		INFO_REALIGN_3_PRIME	chr12	TogoVar
PIK3C2G_chr12_18256518_18653416	18369747	GTCGTATA others(23): Show GTCGTATAATTGACATATGATCATATAACGA	G G	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00544.hp1 HG00558.hp1 others(75): Show HG00280.hp2 HG00544.hp1 HG00558.hp1 HG00621.hp2 HG00735.hp1 HG00738.hp1 HG01069.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01192.hp1 HG01192.hp2 HG01256.hp1 HG01256.hp2 HG01258.hp2 HG01261.hp1 HG01433.hp1 HG01515.hp2 HG01884.hp1 HG01891.hp1 HG01891.hp2 HG01952.hp1 HG01981.hp1 HG01981.hp2 HG02055.hp1 HG02055.hp2 HG02109.hp1 HG02145.hp2 HG02300.hp2 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02630.hp1 HG02683.hp1 HG02717.hp1 HG02717.hp2 HG02738.hp1 HG02738.hp2 HG02895.hp2 HG02922.hp2 HG03098.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp2 HG03239.hp2 HG03453.hp1 HG03491.hp1 HG03540.hp2 HG03688.hp2 HG04184.hp2 HG06807.hp1 NA18522.hp1 NA18906.hp1 NA18954.hp2 NA18964.hp2 NA18982.hp2 NA18984.hp1 NA18986.hp2 NA18990.hp1 NA18995.hp2 NA19011.hp1 NA19030.hp2 NA19043.hp1 NA19060.hp1 NA19063.hp2 NA19084.hp2 NA19085.hp2 NA19240.hp2 NA20129.hp1 NA20300.hp1 NA20752.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(14): Show a0001 a0002 a0003 a0004 a0005 a0006 a0008 a0009 a0010 a0011 a0012 a0013 a0014 a0016 a0017 a0018 a0019	a0001c0001 a0001c0008 a0001c0010 others(27): Show a0001c0001 a0001c0008 a0001c0010 a0001c0037 a0002c0003 a0002c0009 a0003c0002 a0003c0026 a0003c0027 a0003c0028 a0004c0005 a0004c0012 a0005c0006 a0005c0015 a0005c0042 a0006c0050 a0008c0047 a0008c0048 a0008c0051 a0009c0044 a0009c0045 a0010c0013 a0011c0018 a0012c0052 a0013c0025 a0014c0023 a0016c0036 a0017c0038 a0018c0040 a0019c0030	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(35): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0008t0001 a0001c0010t0001 a0001c0010t0003 a0001c0037t0002 a0002c0003t0001 a0002c0003t0002 a0002c0009t0003 a0003c0002t0001 a0003c0002t0003 a0003c0026t0001 a0003c0027t0001 a0003c0028t0002 a0004c0005t0001 a0004c0012t0001 a0004c0012t0002 a0005c0006t0001 a0005c0006t0002 a0005c0015t0001 a0005c0042t0002 a0006c0050t0001 a0008c0047t0002 a0008c0048t0002 a0008c0051t0001 a0009c0044t0002 a0009c0045t0003 a0010c0013t0007 a0011c0018t0001 a0011c0018t0003 a0012c0052t0001 a0013c0025t0001 a0014c0023t0002 a0016c0036t0003 a0017c0038t0002 a0018c0040t0001 a0019c0030t0002	a0001c0001t0001g0015 a0001c0001t0001g0018 a0001c0001t0001g0030 others(75): Show a0001c0001t0001g0015 a0001c0001t0001g0018 a0001c0001t0001g0030 a0001c0001t0001g0040 a0001c0001t0001g0061 a0001c0001t0001g0064 a0001c0001t0001g0066 a0001c0001t0001g0153 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0160 a0001c0001t0001g0166 a0001c0001t0002g0011 a0001c0001t0002g0063 a0001c0001t0003g0152 a0001c0001t0003g0155 a0001c0008t0001g0023 a0001c0008t0001g0074 a0001c0010t0001g0161 a0001c0010t0001g0162 a0001c0010t0001g0164 a0001c0010t0003g0171 a0001c0037t0002g0173 a0002c0003t0001g0039 a0002c0003t0001g0055 a0002c0003t0001g0169 a0002c0003t0002g0054 a0002c0009t0003g0143 a0003c0002t0001g0092 a0003c0002t0001g0094 a0003c0002t0001g0100 a0003c0002t0001g0101 a0003c0002t0001g0105 a0003c0002t0001g0106 a0003c0002t0001g0111 a0003c0002t0001g0112 a0003c0002t0001g0113 a0003c0002t0001g0122 a0003c0002t0001g0123 a0003c0002t0001g0124 a0003c0002t0001g0125 a0003c0002t0001g0127 a0003c0002t0001g0131 a0003c0002t0001g0132 a0003c0002t0001g0134 a0003c0002t0001g0135 a0003c0002t0003g0099 a0003c0002t0003g0133 a0003c0026t0001g0098 a0003c0027t0001g0110 a0003c0028t0002g0093 a0004c0005t0001g0103 a0004c0012t0001g0097 a0004c0012t0001g0120 a0004c0012t0002g0136 a0005c0006t0001g0144 a0005c0006t0002g0058 a0005c0006t0002g0107 a0005c0015t0001g0010 a0005c0015t0001g0069 a0005c0015t0001g0150 a0005c0042t0002g0174 a0006c0050t0001g0046 a0008c0047t0002g0079 a0008c0048t0002g0075 a0008c0051t0001g0049 a0009c0044t0002g0080 a0009c0045t0003g0076 a0010c0013t0007g0003 a0011c0018t0001g0108 a0011c0018t0003g0117 a0012c0052t0001g0027 a0013c0025t0001g0102 a0014c0023t0002g0116 a0016c0036t0003g0067 a0017c0038t0002g0072 a0018c0040t0001g0062 a0019c0030t0002g0175	78	176	0.4432	-30	c.174 others(49): Show c.1749-1135_1749-1106delCGATCGTATAATTGACATATGATCAT ATAA	PIK3C2G	ENSG00000139144.11	transcript	ENST00000538779.6	protein_coding	12/32		INFO_REALIGN_3_PRIME	chr12	TogoVar
PIK3C2G_chr12_18256518_18653416	18559801	TATATATA others(23): Show TATATATATATATATATATATAGAGAGAGAG	T T	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG01099.hp2 HG01496.hp2 others(1): Show HG00280.hp1 HG01099.hp2 HG01496.hp2 HG03688.hp1	a0002 a0007 a0012 a0002 a0007 a0012	a0002c0003 a0007c0007 a0012c0052 a0002c0003 a0007c0007 a0012c0052	a0002c0003t0001 a0002c0003t0004 a0007c0007t0001 others(1): Show a0002c0003t0001 a0002c0003t0004 a0007c0007t0001 a0012c0052t0001	a0002c0003t0001g0065 a0002c0003t0004g0168 a0007c0007t0001g0007 others(1): Show a0002c0003t0001g0065 a0002c0003t0004g0168 a0007c0007t0001g0007 a0012c0052t0001g0027	4	176	0.0227	-30	c.359 others(49): Show c.3591-2900_3591-2871delTATATATATATATATATATAGAGAGA GAGA	PIK3C2G	ENSG00000139144.11	transcript	ENST00000538779.6	protein_coding	26/32		INFO_REALIGN_3_PRIME	chr12	TogoVar
PIK3C2G_chr12_18256518_18653416	18559803	TATATATA others(23): Show TATATATATATATATATATAGAGAGAGAGAG	T T	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01069.hp1 NA20752.hp2 HG00735.hp1 HG01069.hp1 NA20752.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0002c0035 a0001c0001 a0002c0003 a0002c0035	a0001c0001t0001 a0002c0003t0001 a0002c0035t0002 a0001c0001t0001 a0002c0003t0001 a0002c0035t0002	a0001c0001t0001g0158 a0002c0003t0001g0163 a0002c0035t0002g0165 a0001c0001t0001g0158 a0002c0003t0001g0163 a0002c0035t0002g0165	3	176	0.0171	-30	c.359 others(49): Show c.3591-2898_3591-2869delTATATATATATATATATAGAGAGAGA GAGA	PIK3C2G	ENSG00000139144.11	transcript	ENST00000538779.6	protein_coding	26/32		INFO_REALIGN_3_PRIME	chr12	TogoVar
PIK3C2G_chr12_18256518_18653416	18559805	TATATATA others(23): Show TATATATATATATATATAGAGAGAGAGAGAG	T T	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG02602.hp2 HG02683.hp2 others(1): Show HG01261.hp2 HG02602.hp2 HG02683.hp2 HG03669.hp1	a0003 a0007 a0010 a0003 a0007 a0010	a0003c0002 a0003c0024 a0007c0007 others(1): Show a0003c0002 a0003c0024 a0007c0007 a0010c0013	a0003c0002t0003 a0003c0024t0001 a0007c0007t0001 others(1): Show a0003c0002t0003 a0003c0024t0001 a0007c0007t0001 a0010c0013t0001	a0003c0002t0003g0133 a0003c0024t0001g0126 a0007c0007t0001g0006 others(1): Show a0003c0002t0003g0133 a0003c0024t0001g0126 a0007c0007t0001g0006 a0010c0013t0001g0001	4	176	0.0227	-30	c.359 others(49): Show c.3591-2896_3591-2867delTATATATATATATATAGAGAGAGAGA GAGA	PIK3C2G	ENSG00000139144.11	transcript	ENST00000538779.6	protein_coding	26/32		INFO_REALIGN_3_PRIME	chr12	TogoVar
PIK3C2G_chr12_18256518_18653416	18559807	TATATATA others(23): Show TATATATATATATATAGAGAGAGAGAGAGAG	T T	intron_variant intron_variant	MODIFIER	HG02300.hp1 HG03831.hp2 HG02300.hp1 HG03831.hp2	a0001 a0007 a0001 a0007	a0001c0001 a0007c0007 a0001c0001 a0007c0007	a0001c0001t0001 a0007c0007t0001 a0001c0001t0001 a0007c0007t0001	a0001c0001t0001g0167 a0007c0007t0001g0002 a0001c0001t0001g0167 a0007c0007t0001g0002	2	176	0.0114	-30	c.359 others(49): Show c.3591-2894_3591-2865delTATATATATATATAGAGAGAGAGAGA GAGA	PIK3C2G	ENSG00000139144.11	transcript	ENST00000538779.6	protein_coding	26/32		INFO_REALIGN_3_PRIME	chr12	TogoVar
PIK3C2G_chr12_18256518_18653416	18559809	TATATATA others(23): Show TATATATATATATAGAGAGAGAGAGAGAGAG	T T	intron_variant intron_variant	MODIFIER	HG03491.hp2 HG03491.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0022 a0002c0003t0001g0022	1	176	0.0057	-30	c.359 others(49): Show c.3591-2892_3591-2863delTATATATATATAGAGAGAGAGAGAGA GAGA	PIK3C2G	ENSG00000139144.11	transcript	ENST00000538779.6	protein_coding	26/32		INFO_REALIGN_3_PRIME	chr12	TogoVar
PIK3C2G_chr12_18256518_18653416	18650690	GTGTGTGT others(23): Show GTGTGTGTGTGTGTGTATATATCTATATATA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18986.hp2 NA18986.hp2	a0003 a0003	a0003c0002 a0003c0002	a0003c0002t0001 a0003c0002t0001	a0003c0002t0001g0112 a0003c0002t0001g0112	1	176	0.0057	-30	c.26 others(41): Show c.2663_*2692delTGTGTGTGTGTGTGTATATATCTATATATA	PIK3C2G	ENSG00000139144.11	transcript	ENST00000538779.6	protein_coding		2275		chr12	TogoVar
PIK3C3_chr18_41950234_42092830	42009616	CTACATTA others(23): Show CTACATTATGTAATGTACATTATGTAATGCT	C C	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02258.hp2 HG02723.hp1 others(4): Show HG01891.hp2 HG02258.hp2 HG02723.hp1 HG02809.hp2 HG03225.hp1 NA18747.hp2 NA18971.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0020 others(2): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0020 a0001c0001t0036 a0001c0001t0053	a0001c0001t0002g0266 a0001c0001t0003g0071 a0001c0001t0020g0002 others(4): Show a0001c0001t0002g0266 a0001c0001t0003g0071 a0001c0001t0020g0002 a0001c0001t0020g0010 a0001c0001t0020g0011 a0001c0001t0036g0002 a0001c0001t0053g0121	7	340	0.0206	-30	c.117 others(49): Show c.1171-3700_1171-3671delTATGTAATGTACATTATGTAATGCTT ACAT	PIK3C3	ENSG00000078142.14	transcript	ENST00000262039.9	protein_coding	10/24		INFO_REALIGN_3_PRIME	chr18	TogoVar
PIK3C3_chr18_41950234_42092830	42054126	GTATATAT others(23): Show GTATATATATATATATATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	NA18906.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0023 a0001c0001t0023	a0001c0001t0023g0235 a0001c0001t0023g0235	1	340	0.0029	-30	c.226 others(49): Show c.2264-3720_2264-3691delTATATATATATATATATATATATATA TATA	PIK3C3	ENSG00000078142.14	transcript	ENST00000262039.9	protein_coding	21/24		INFO_REALIGN_3_PRIME	chr18	TogoVar
PIK3CB_chr3_138647698_138839928	138747054	TTATATAT others(23): Show TTATATATATATATATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02109.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0018 a0001c0001t0018	a0001c0001t0018g0169 a0001c0001t0018g0169	1	206	0.0049	-30	c.398 others(47): Show c.398-4303_398-4274delTATATATATATATATATATATATATATA TA	PIK3CB	ENSG00000051382.9	transcript	ENST00000674063.1	protein_coding	4/23			chr3	TogoVar
PIK3R6_chr17_8797722_8872674	8840294	ACAAATAT others(23): Show ACAAATATGTATATGAAATATATATAGCCTC	A A	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02027.hp2 HG02698.hp1 others(8): Show HG01884.hp1 HG02027.hp2 HG02698.hp1 HG02895.hp2 HG03098.hp1 NA18941.hp1 NA18942.hp1 NA18977.hp2 NA19002.hp2 NA19009.hp2 NA19089.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0009 a0001c0001t0001g0061 a0001c0001t0001g0086 others(8): Show a0001c0001t0001g0009 a0001c0001t0001g0061 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0092 a0001c0001t0001g0106 a0001c0001t0001g0152 a0001c0001t0001g0203 a0001c0001t0001g0262 a0001c0001t0001g0275 a0001c0002t0001g0290	11	354	0.0311	-30	c.14- others(43): Show c.14-627_14-598delGAGGCTATATATATTTCATATACATATTTG	PIK3R6	ENSG00000276231.5	transcript	ENST00000619866.5	protein_coding	2/19			chr17	TogoVar
PIP4K2A_chr10_22529854_22719578	22664192	CATATATA others(23): Show CATATATATATACATATATATATATACATAT	C C	intron_variant intron_variant	MODIFIER	HG03225.hp1 NA19043.hp1 HG03225.hp1 NA19043.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0023 a0001c0002t0001g0024 a0001c0002t0001g0023 a0001c0002t0001g0024	2	206	0.0097	-30	c.144 others(49): Show c.144+49961_144+49990delATATGTATATATATATATGTATATAT ATAT	PIP4K2A	ENSG00000150867.14	transcript	ENST00000376573.9	protein_coding	1/9			chr10	TogoVar
PIP5K1B_chr9_68700240_69014176	68880562	CACACACA others(23): Show CACACACACACACACACACACACACACGCAT	C C	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00642.hp1 HG00738.hp2 others(14): Show HG00323.hp1 HG00642.hp1 HG00738.hp2 HG01071.hp1 HG01169.hp2 HG01243.hp1 HG01361.hp2 HG01884.hp1 HG02647.hp1 HG02683.hp1 HG02723.hp2 HG03490.hp1 HG03831.hp2 HG04199.hp1 NA18970.hp1 NA19043.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0002c0003t0002	a0001c0001t0001g0005 a0001c0001t0001g0077 a0001c0001t0001g0084 others(14): Show a0001c0001t0001g0005 a0001c0001t0001g0077 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0093 a0001c0001t0002g0097 a0001c0001t0002g0174 a0001c0001t0002g0178 a0001c0001t0002g0186 a0001c0001t0002g0187 a0001c0001t0002g0188 a0001c0001t0002g0189 a0001c0001t0002g0193 a0001c0001t0003g0139 a0001c0001t0003g0141 a0002c0003t0002g0181 a0002c0003t0002g0183	17	220	0.0773	-30	c.318 others(47): Show c.318+3793_318+3822delACGCATACACACACACACACACACACAC AC	PIP5K1B	ENSG00000107242.20	transcript	ENST00000265382.8	protein_coding	6/15		INFO_REALIGN_3_PRIME	chr9	TogoVar
PIPOX_chr17_29038141_29062216	29039613	CATATATA others(23): Show CATATATATATATATATATATATATATATAT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18986.hp2 NA19003.hp2 NA19066.hp1 others(1): Show NA18986.hp2 NA19003.hp2 NA19066.hp1 NA19079.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0012 a0001c0001t0001g0012	4	396	0.0101	-30	c.-36 others(41): Show c.-3612_-3583delATATATATATATATATATATATATATATAT	PIPOX	ENSG00000179761.12	transcript	ENST00000323372.9	protein_coding		3527		chr17	TogoVar
PITPNC1_chr17_67372281_67702256	67373892	GATATATA others(23): Show GATATATATATATATATATATATATATATAT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04199.hp1 HG04199.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0016	a0001c0001t0016g0044 a0001c0001t0016g0044	1	218	0.0046	-30	c.-42 others(41): Show c.-4262_-4233delATATATATATATATATATATATATATATAT	PITPNC1	ENSG00000154217.16	transcript	ENST00000581322.6	protein_coding		3388		chr17	TogoVar
PITPNC1_chr17_67372281_67702256	67425193	GCACGCAC others(23): Show GCACGCACACGCACACACACACACACACACA	G G	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG03710.hp2 HG04184.hp1 others(2): Show HG02486.hp2 HG03710.hp2 HG04184.hp1 HG04184.hp2 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0005 a0001c0001t0008 others(2): Show a0001c0001t0002 a0001c0001t0005 a0001c0001t0008 a0001c0001t0041 a0001c0001t0052	a0001c0001t0002g0139 a0001c0001t0005g0089 a0001c0001t0008g0173 others(2): Show a0001c0001t0002g0139 a0001c0001t0005g0089 a0001c0001t0008g0173 a0001c0001t0041g0215 a0001c0001t0052g0147	5	218	0.0229	-30	c.48+ others(47): Show c.48+46995_48+47024delGCACACGCACACACACACACACACACAC AC	PITPNC1	ENSG00000154217.16	transcript	ENST00000581322.6	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr17	TogoVar
PITPNC1_chr17_67372281_67702256	67425197	GCACACGC others(23): Show GCACACGCACACACACACACACACACACACA	G G	intron_variant intron_variant	MODIFIER	HG02074.hp1 HG02074.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0043 a0001c0001t0003g0043	1	218	0.0046	-30	c.48+ others(47): Show c.48+47001_48+47030delGCACACACACACACACACACACACACAC AC	PITPNC1	ENSG00000154217.16	transcript	ENST00000581322.6	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr17	TogoVar
PITPNC1_chr17_67372281_67702256	67428484	AATCGCAC others(23): Show AATCGCACTACTGCACTTCAGCCTGGGCAAC	A A	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00140.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0014	a0001c0001t0014g0019 a0001c0001t0014g0019	1	218	0.0046	-30	c.48+ others(47): Show c.48+50284_48+50313delTCGCACTACTGCACTTCAGCCTGGGCAA CA	PITPNC1	ENSG00000154217.16	transcript	ENST00000581322.6	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr17	TogoVar
PITPNC1_chr17_67372281_67702256	67442204	CATATATA others(23): Show CATATATATATATATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02976.hp1 HG03516.hp1 others(1): Show HG02723.hp2 HG02976.hp1 HG03516.hp1 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0013 a0001c0001t0034 others(1): Show a0001c0001t0006 a0001c0001t0013 a0001c0001t0034 a0001c0001t0048	a0001c0001t0006g0119 a0001c0001t0013g0197 a0001c0001t0034g0072 others(1): Show a0001c0001t0006g0119 a0001c0001t0013g0197 a0001c0001t0034g0072 a0001c0001t0048g0143	4	218	0.0184	-30	c.48+ others(47): Show c.48+64017_48+64046delATATATATATATATATATATATATATAT AT	PITPNC1	ENSG00000154217.16	transcript	ENST00000581322.6	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr17	TogoVar
PITPNC1_chr17_67372281_67702256	67442220	TATATATA others(23): Show TATATATATATATATATATATATATATATGC	T T	intron_variant intron_variant	MODIFIER	HG03041.hp2 HG03041.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0077 a0001c0001t0077	a0001c0001t0077g0071 a0001c0001t0077g0071	1	218	0.0046	-30	c.48+ others(47): Show c.48+64021_48+64050delATATATATATATATATATATATATATGC AT	PITPNC1	ENSG00000154217.16	transcript	ENST00000581322.6	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr17	TogoVar
PIWIL1_chr12_130332887_130377637	130372597	CAAAAAAA others(23): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA19030.hp2 NA21309.hp1 NA19030.hp2 NA21309.hp1	a0003 a0003	a0003c0007 a0003c0007	a0003c0007t0032 a0003c0007t0032	a0003c0007t0032g0249 a0003c0007t0032g0250 a0003c0007t0032g0249 a0003c0007t0032g0250	2	425	0.0047	-30	c.91 others(39): Show c.919_*948delAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	PIWIL1	ENSG00000125207.7	transcript	ENST00000245255.7	protein_coding	21/21	919	INFO_REALIGN_3_PRIME	chr12	TogoVar
PKD1L3_chr16_71924538_72005402	71945291	TATATATA others(23): Show TATATATATATATATACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG02809.hp1 HG02809.hp1	a0004 a0004	a0004c0041 a0004c0041	a0004c0041t0001 a0004c0041t0001	a0004c0041t0001g0124 a0004c0041t0001g0124	1	308	0.0033	-30	c.371 others(49): Show c.3719-1151_3719-1122delGTGTGTGTGTGTGTGTATATATATAT ATAT	PKD1L3	ENSG00000277481.2	transcript	ENST00000620267.2	protein_coding	22/29			chr16	TogoVar
PKD1L3_chr16_71924538_72005402	71945299	TATATATA others(23): Show TATATATACACACACACACACACATATATAC	T T	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG01928.hp1 HG02056.hp2 others(12): Show HG00558.hp1 HG01928.hp1 HG02056.hp2 HG02523.hp1 HG03491.hp1 HG03831.hp2 NA18952.hp2 NA18965.hp1 NA18966.hp1 NA18968.hp2 NA18972.hp1 NA18972.hp2 NA19007.hp1 NA20905.hp1 NA20905.hp2	a0001 a0004 a0017 a0001 a0004 a0017	a0001c0001 a0001c0067 a0004c0009 others(1): Show a0001c0001 a0001c0067 a0004c0009 a0017c0019	a0001c0001t0001 a0001c0067t0001 a0004c0009t0001 others(1): Show a0001c0001t0001 a0001c0067t0001 a0004c0009t0001 a0017c0019t0001	a0001c0001t0001g0177 a0001c0001t0001g0185 a0001c0001t0001g0187 others(12): Show a0001c0001t0001g0177 a0001c0001t0001g0185 a0001c0001t0001g0187 a0001c0001t0001g0189 a0001c0001t0001g0202 a0001c0001t0001g0203 a0001c0001t0001g0205 a0001c0001t0001g0212 a0001c0001t0001g0229 a0001c0001t0001g0265 a0001c0001t0001g0276 a0001c0067t0001g0201 a0004c0009t0001g0060 a0004c0009t0001g0109 a0017c0019t0001g0015	15	308	0.0487	-30	c.371 others(49): Show c.3719-1159_3719-1130delGTATATATGTGTGTGTGTGTGTGTAT ATAT	PKD1L3	ENSG00000277481.2	transcript	ENST00000620267.2	protein_coding	22/29			chr16	TogoVar
PKD2L1_chr10_100283149_100335228	100315009	AGGAAGGG others(23): Show AGGAAGGGAAGGGAAGGGAAGGGAAGGGAAG	A A	intron_variant intron_variant	MODIFIER	NA18947.hp2 NA18947.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0233 a0001c0001t0001g0233	1	306	0.0033	-30	c.349 others(49): Show c.349+14172_349+14201delCTTCCCTTCCCTTCCCTTCCCTTCCC TTCC	PKD2L1	ENSG00000107593.17	transcript	ENST00000318222.4	protein_coding	2/15			chr10	TogoVar
PKHD1_chr6_51610299_52092613	51977254	CTCTGTGA others(23): Show CTCTGTGAAGGGTGGGTTTGCACACCTTGTT	C C	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02622.hp2	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0001 a0001c0009t0001	a0001c0009t0001g0103 a0001c0009t0001g0103	1	134	0.0075	-30	c.575 others(51): Show c.5752-17258_5752-17229delAACAAGGTGTGCAAACCCACCCTT CACAGA	PKHD1	ENSG00000170927.15	transcript	ENST00000371117.8	protein_coding	35/66			chr6	TogoVar
PKIA_chr8_78511340_78610267	78524053	TATAAACA others(23): Show TATAAACATTTATATTTATATATAAATATAA	T T	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG02572.hp2 HG02615.hp2 others(6): Show HG01070.hp1 HG02572.hp2 HG02615.hp2 HG02622.hp1 HG02809.hp1 HG02970.hp1 HG02976.hp1 HG03225.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0012 a0001c0001t0001 a0001c0001t0012	a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0107 others(6): Show a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0112 a0001c0001t0012g0106	9	186	0.0484	-30	c.-15 others(49): Show c.-157+7615_-157+7644delAATAAACATTTATATTTATATATAAA TATA	PKIA	ENSG00000171033.13	transcript	ENST00000396418.7	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr8	TogoVar
PKLR_chr1_155284293_155306438	155299004	TTCTTTCT others(23): Show TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	T T	intron_variant intron_variant	MODIFIER	HG01934.hp1 HG03225.hp2 HG03831.hp2 HG01934.hp1 HG03225.hp2 HG03831.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0128 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0128	3	311	0.0097	-30	c.283 others(47): Show c.283+1064_283+1093delGAAAGAAAGAAAGAAAGAAAGAAAGAAA GA	PKLR	ENSG00000143627.19	transcript	ENST00000342741.6	protein_coding	2/10			chr1	TogoVar
PKM_chr15_72194029_72236190	72209429	ATATATAT others(23): Show ATATATATATATGTATATATATATATATATG	A A	intron_variant intron_variant	MODIFIER	HG02970.hp2 HG03516.hp2 NA18948.hp2 others(10): Show HG02970.hp2 HG03516.hp2 NA18948.hp2 NA18953.hp1 NA18964.hp1 NA18968.hp1 NA18971.hp1 NA18972.hp1 NA18988.hp1 NA18989.hp1 NA18999.hp2 NA19064.hp2 NA19070.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0004 a0001c0001t0001g0164 a0001c0001t0001g0173 others(7): Show a0001c0001t0001g0004 a0001c0001t0001g0164 a0001c0001t0001g0173 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0191 a0001c0001t0001g0195 a0001c0001t0001g0196 a0001c0001t0001g0200 a0001c0001t0001g0321	13	370	0.0351	-30	c.565 others(45): Show c.565+214_565+243delCATATATATATATATATACATATATATATA	PKM	ENSG00000067225.21	transcript	ENST00000335181.10	protein_coding	5/10			chr15	TogoVar
PKN2_chr1_88679273_88841255	88820180	CTATATAT others(23): Show CTATATATATATATATATATATATATATATA	C C	intron_variant intron_variant	MODIFIER	HG02809.hp2 NA18522.hp1 HG02809.hp2 NA18522.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0013 a0001c0004t0013	a0001c0004t0013g0026 a0001c0004t0013g0027 a0001c0004t0013g0026 a0001c0004t0013g0027	2	330	0.0061	-30	c.228 others(49): Show c.2280-1736_2280-1707delTATATATATATATATATATATATATA TATA	PKN2	ENSG00000065243.20	transcript	ENST00000370521.8	protein_coding	16/21		INFO_REALIGN_3_PRIME	chr1	TogoVar
PKNOX2_chr11_125159751_125438389	125189433	GTGTGTGT others(23): Show GTGTGTGTGTGTGTGTATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG03491.hp1 HG03491.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0145 a0001c0001t0007g0145	1	222	0.0045	-30	c.-20 others(51): Show c.-201+24659_-201+24688delGTGTGTGTGTGTGTATATATATAT ATATAT	PKNOX2	ENSG00000165495.16	transcript	ENST00000298282.14	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr11	TogoVar
PKP3_chr11_389209_409908	401182	GGCCCCGC others(23): Show GGCCCCGCTCACACCCGGCCCGCTCACACCC	G G	intron_variant intron_variant	MODIFIER	HG03471.hp1 NA18906.hp1 NA20300.hp2 HG03471.hp1 NA18906.hp1 NA20300.hp2	a0001 a0003 a0001 a0003	a0001c0004 a0003c0014 a0001c0004 a0003c0014	a0001c0004t0001 a0003c0014t0001 a0001c0004t0001 a0003c0014t0001	a0001c0004t0001g0008 a0001c0004t0001g0194 a0003c0014t0001g0187 a0001c0004t0001g0008 a0001c0004t0001g0194 a0003c0014t0001g0187	3	216	0.0139	-30	c.173 others(47): Show c.1737+489_1737+518delACCCGGCCCGCTCACACCCGCCCCGCTC AC	PKP3	ENSG00000184363.10	transcript	ENST00000331563.7	protein_coding	8/12		INFO_REALIGN_3_PRIME	chr11	TogoVar
PKP3_chr11_389209_409908	401505	GGCCCCGT others(23): Show GGCCCCGTTCACACCCGCCCCGCTCACACCC	G G	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG03834.hp2 HG02622.hp2 HG03834.hp2	a0001 a0001	a0001c0007 a0001c0021 a0001c0007 a0001c0021	a0001c0007t0001 a0001c0021t0001 a0001c0007t0001 a0001c0021t0001	a0001c0007t0001g0021 a0001c0021t0001g0086 a0001c0007t0001g0021 a0001c0021t0001g0086	2	216	0.0093	-30	c.173 others(47): Show c.1737+807_1737+836delTTCACACCCGCCCCGCTCACACCCGCCC CG	PKP3	ENSG00000184363.10	transcript	ENST00000331563.7	protein_coding	8/12		INFO_REALIGN_3_PRIME	chr11	TogoVar
PKP3_chr11_389209_409908	401778	CACCCCCG others(23): Show CACCCCCGACCCCCGGCCCCGCTCACCCCCG	C C	intron_variant intron_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0001 a0001	a0001c0011 a0001c0011	a0001c0011t0001 a0001c0011t0001	a0001c0011t0001g0001 a0001c0011t0001g0001	1	216	0.0046	-30	c.173 others(49): Show c.1737+1081_1737+1110delACCCCCGGCCCCGCTCACCCCCGACC CCCG	PKP3	ENSG00000184363.10	transcript	ENST00000331563.7	protein_coding	8/12		INFO_REALIGN_3_PRIME	chr11	TogoVar
PKP3_chr11_389209_409908	402135	GCTCCACT others(23): Show GCTCCACTGACCCCGGCCCCGCTCACCCCGA	G G	intron_variant intron_variant	MODIFIER	HG02258.hp1 NA19030.hp2 HG02258.hp1 NA19030.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0001 a0001c0005t0001	a0001c0005t0001g0019 a0001c0005t0001g0025 a0001c0005t0001g0019 a0001c0005t0001g0025	2	216	0.0093	-30	c.173 others(47): Show c.1738-941_1738-912delTCCACTGACCCCGGCCCCGCTCACCCCG AC	PKP3	ENSG00000184363.10	transcript	ENST00000331563.7	protein_coding	8/12		INFO_REALIGN_3_PRIME	chr11	TogoVar
PLA1A_chr3_119592885_119634811	119594611	AGTAGTAG others(23): Show AGTAGTAGGTCAAAAGAAGGGTGTAAAAATC	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00280.hp1 HG01934.hp1 HG00280.hp1 HG01934.hp1	a0004 a0004	a0004c0007 a0004c0007	a0004c0007t0001 a0004c0007t0001	a0004c0007t0001g0335 a0004c0007t0001g0336 a0004c0007t0001g0335 a0004c0007t0001g0336	2	420	0.0048	-30	c.-33 others(41): Show c.-3302_-3273delGTAGTAGGTCAAAAGAAGGGTGTAAAAATC	PLA1A	ENSG00000144837.9	transcript	ENST00000273371.9	protein_coding		3273		chr3	TogoVar
PLA1A_chr3_119592885_119634811	119622181	AAGAAGAA others(23): Show AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGG	A A	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00544.hp2 HG00558.hp1 others(85): Show HG00438.hp1 HG00544.hp2 HG00558.hp1 HG00642.hp2 HG01069.hp1 HG01106.hp2 HG01167.hp1 HG01192.hp1 HG01358.hp1 HG01928.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp2 HG02027.hp1 HG02040.hp1 HG02040.hp2 HG02071.hp2 HG02074.hp2 HG02080.hp1 HG02083.hp2 HG02129.hp2 HG02486.hp2 HG02523.hp2 HG02602.hp1 HG02647.hp1 HG02723.hp1 HG02886.hp1 HG02970.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp2 HG03669.hp1 HG03710.hp1 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG04204.hp1 HG04228.hp1 HG04228.hp2 NA18612.hp2 NA18747.hp2 NA18939.hp2 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18945.hp2 NA18946.hp2 NA18949.hp2 NA18954.hp2 NA18957.hp2 NA18962.hp1 NA18963.hp2 NA18970.hp1 NA18973.hp1 NA18974.hp2 NA18977.hp2 NA18980.hp1 NA18983.hp1 NA18988.hp1 NA18990.hp1 NA18990.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp2 NA19001.hp2 NA19007.hp1 NA19007.hp2 NA19010.hp2 NA19011.hp1 NA19012.hp2 NA19055.hp1 NA19058.hp1 NA19058.hp2 NA19065.hp1 NA19066.hp2 NA19067.hp2 NA19068.hp1 NA19070.hp2 NA19074.hp2 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19078.hp1 NA19079.hp1 NA19083.hp2 NA19084.hp2 NA19088.hp1 NA20905.hp1	a0001 a0006 a0010 a0001 a0006 a0010	a0001c0001 a0001c0002 a0001c0022 others(2): Show a0001c0001 a0001c0002 a0001c0022 a0006c0021 a0010c0018	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(15): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0008 a0001c0001t0009 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0004 a0001c0002t0006 a0001c0002t0009 a0001c0002t0010 a0001c0022t0004 a0006c0021t0001 a0010c0018t0003	a0001c0001t0001g0033 a0001c0001t0001g0176 a0001c0001t0001g0178 others(73): Show a0001c0001t0001g0033 a0001c0001t0001g0176 a0001c0001t0001g0178 a0001c0001t0001g0182 a0001c0001t0001g0185 a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0327 a0001c0001t0002g0004 a0001c0001t0002g0030 a0001c0001t0002g0046 a0001c0001t0002g0100 a0001c0001t0002g0186 a0001c0001t0002g0331 a0001c0001t0003g0004 a0001c0001t0003g0008 a0001c0001t0003g0175 a0001c0001t0003g0189 a0001c0001t0003g0203 a0001c0001t0003g0274 a0001c0001t0004g0008 a0001c0001t0004g0032 a0001c0001t0004g0033 a0001c0001t0004g0183 a0001c0001t0004g0200 a0001c0001t0004g0201 a0001c0001t0004g0205 a0001c0001t0004g0206 a0001c0001t0004g0234 a0001c0001t0004g0273 a0001c0001t0004g0289 a0001c0001t0004g0304 a0001c0001t0005g0004 a0001c0001t0005g0013 a0001c0001t0005g0031 a0001c0001t0005g0075 a0001c0001t0005g0102 a0001c0001t0005g0172 a0001c0001t0005g0179 a0001c0001t0005g0181 a0001c0001t0005g0187 a0001c0001t0005g0188 a0001c0001t0005g0194 a0001c0001t0005g0195 a0001c0001t0005g0196 a0001c0001t0005g0197 a0001c0001t0005g0202 a0001c0001t0005g0204 a0001c0001t0005g0330 a0001c0001t0006g0004 a0001c0001t0008g0004 a0001c0001t0009g0199 a0001c0002t0001g0015 a0001c0002t0002g0111 a0001c0002t0003g0132 a0001c0002t0003g0133 a0001c0002t0003g0151 a0001c0002t0003g0163 a0001c0002t0004g0006 a0001c0002t0004g0021 a0001c0002t0004g0025 a0001c0002t0004g0027 a0001c0002t0004g0134 a0001c0002t0004g0135 a0001c0002t0004g0139 a0001c0002t0004g0140 a0001c0002t0004g0162 a0001c0002t0004g0301 a0001c0002t0006g0025 a0001c0002t0006g0119 a0001c0002t0009g0112 a0001c0002t0009g0120 a0001c0002t0010g0006 a0001c0022t0004g0171 a0006c0021t0001g0013 a0010c0018t0003g0104	88	420	0.2095	-30	c.101 others(49): Show c.1012+2533_1012+2562delAGAAGAAGAAGAAGAAGAAGAAGAAG GAGA	PLA1A	ENSG00000144837.9	transcript	ENST00000273371.9	protein_coding	8/10		INFO_REALIGN_3_PRIME	chr3	TogoVar
PLA2G12A_chr4_109704989_109735070	109706129	TTTTATAT others(23): Show TTTTATATATATATATATATATATATATATA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02280.hp2 HG02559.hp1 HG02647.hp2 others(4): Show HG02280.hp2 HG02559.hp1 HG02647.hp2 HG03041.hp2 HG06807.hp1 NA18906.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0012	a0001c0001t0012g0033 a0001c0001t0012g0115 a0001c0001t0012g0116 others(3): Show a0001c0001t0012g0033 a0001c0001t0012g0115 a0001c0001t0012g0116 a0001c0001t0012g0117 a0001c0001t0012g0118 a0001c0001t0012g0119	7	412	0.0170	-30	c.82 others(41): Show c.8218_*8247delTATATATATATATATATATATATATATAAA	PLA2G12A	ENSG00000123739.11	transcript	ENST00000243501.10	protein_coding		3859		chr4	TogoVar
PLA2G12A_chr4_109704989_109735070	109720590	AAAAAAAA others(23): Show AAAAAAAAAAAAAAAATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	NA20129.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0230 a0001c0001t0006g0230	1	412	0.0024	-30	c.209 others(47): Show c.209-1861_209-1832delATATATATATATATATTTTTTTTTTTTT TT	PLA2G12A	ENSG00000123739.11	transcript	ENST00000243501.10	protein_coding	1/3			chr4	TogoVar
PLA2G12A_chr4_109704989_109735070	109720592	AAAAAAAA others(23): Show AAAAAAAAAAAAAATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG00639.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0067 a0001c0001t0007g0067	1	412	0.0024	-30	c.209 others(47): Show c.209-1863_209-1834delATATATATATATATATATTTTTTTTTTT TT	PLA2G12A	ENSG00000123739.11	transcript	ENST00000243501.10	protein_coding	1/3			chr4	TogoVar
PLA2G4C_chr19_48042846_48115817	48082036	TTGCTACT others(23): Show TTGCTACTGCACTCCAGCCTGGGCAACAGAG	T T	intron_variant intron_variant	MODIFIER	HG03098.hp2 HG03098.hp2	a0004 a0004	a0004c0007 a0004c0007	a0004c0007t0004 a0004c0007t0004	a0004c0007t0004g0008 a0004c0007t0004g0008	1	322	0.0031	-30	c.844 others(47): Show c.844+2993_844+3022delCTCTGTTGCCCAGGCTGGAGTGCAGTAG CA	PLA2G4C	ENSG00000105499.14	transcript	ENST00000599921.6	protein_coding	10/16			chr19	TogoVar
PLA2G7_chr6_46699201_46740375	46734415	TGAGAGAG others(23): Show TGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	T T	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG01346.hp1 HG01346.hp2 others(20): Show HG01069.hp2 HG01346.hp1 HG01346.hp2 HG01891.hp2 HG02074.hp2 HG02257.hp1 HG02257.hp2 HG02615.hp2 HG02723.hp1 HG02886.hp2 HG02897.hp2 HG02965.hp2 HG02970.hp2 HG03041.hp1 HG03927.hp2 NA18906.hp2 NA18962.hp2 NA18975.hp2 NA18984.hp2 NA19030.hp2 NA19081.hp1 NA19084.hp1 NA19240.hp1	a0001 a0002 a0004 others(2): Show a0001 a0002 a0004 a0005 a0007	a0001c0001 a0002c0002 a0004c0004 others(2): Show a0001c0001 a0002c0002 a0004c0004 a0005c0005 a0007c0007	a0001c0001t0001 a0001c0001t0002 a0002c0002t0002 others(6): Show a0001c0001t0001 a0001c0001t0002 a0002c0002t0002 a0002c0002t0020 a0002c0002t0025 a0002c0002t0035 a0004c0004t0003 a0005c0005t0003 a0007c0007t0003	a0001c0001t0001g0006 a0001c0001t0001g0053 a0001c0001t0001g0058 others(17): Show a0001c0001t0001g0006 a0001c0001t0001g0053 a0001c0001t0001g0058 a0001c0001t0002g0096 a0002c0002t0002g0095 a0002c0002t0020g0124 a0002c0002t0025g0047 a0002c0002t0035g0208 a0004c0004t0003g0014 a0004c0004t0003g0078 a0004c0004t0003g0085 a0004c0004t0003g0086 a0004c0004t0003g0102 a0005c0005t0003g0087 a0005c0005t0003g0092 a0005c0005t0003g0093 a0005c0005t0003g0094 a0007c0007t0003g0054 a0007c0007t0003g0055 a0007c0007t0003g0056	23	392	0.0587	-30	c.-35 others(45): Show c.-35+735_-35+764delTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	PLA2G7	ENSG00000146070.17	transcript	ENST00000274793.12	protein_coding	1/11			chr6	TogoVar
PLA2R1_chr2_159927006_160067615	160013701	CTGTCTCT others(23): Show CTGTCTCTCTCTCTCTCTCTCTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG03209.hp2 NA20300.hp2 HG00639.hp1 HG03209.hp2 NA20300.hp2	a0004 a0004	a0004c0005 a0004c0005	a0004c0005t0051 a0004c0005t0055 a0004c0005t0056 a0004c0005t0051 a0004c0005t0055 a0004c0005t0056	a0004c0005t0051g0025 a0004c0005t0055g0021 a0004c0005t0056g0020 a0004c0005t0051g0025 a0004c0005t0055g0021 a0004c0005t0056g0020	3	326	0.0092	-30	c.155 others(47): Show c.1552-356_1552-327delCACACACACAGAGAGAGAGAGAGAGAGA CA	PLA2R1	ENSG00000153246.13	transcript	ENST00000283243.13	protein_coding	9/29			chr2	TogoVar
PLAAT3_chr11_63569462_63619433	63572958	TTGTGTGT others(23): Show TTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02055.hp1 HG02145.hp1 HG02572.hp1 others(8): Show HG02055.hp1 HG02145.hp1 HG02572.hp1 HG02622.hp2 HG02647.hp1 HG02895.hp1 HG02965.hp2 HG02976.hp2 HG03041.hp1 HG03516.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 a0001c0001t0001 a0001c0001t0002 a0001c0001t0007	a0001c0001t0001g0008 a0001c0001t0001g0164 a0001c0001t0001g0168 others(8): Show a0001c0001t0001g0008 a0001c0001t0001g0164 a0001c0001t0001g0168 a0001c0001t0001g0183 a0001c0001t0001g0291 a0001c0001t0001g0301 a0001c0001t0002g0133 a0001c0001t0002g0138 a0001c0001t0002g0140 a0001c0001t0007g0279 a0001c0001t0007g0281	11	352	0.0313	-30	c.19 others(41): Show c.1957_*1986delCACACACACACACACACACACACACACACA	PLAAT3	ENSG00000176485.14	transcript	ENST00000415826.3	protein_coding		1503		chr11	TogoVar

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