view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
FTO_chr16_53699156_54126941 | 53789863 | TGTATATA others(24): Show |
T | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00558.hp1 others(134): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(62): Show | a0001c0001t0001g0026 a0001c0001t0001g0031 a0001c0001t0001g0060 others(134): Show |
137 | 192 | 0.7135 | -31 | c.46- others(48): Show |
FTO | ENSG00000140718.22 | transcript | ENST00000471389.6 | protein_coding | 1/8 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
FUBP3_chr9_130574577_130643352 | 130589375 | GCTCTTGT others(24): Show |
G | intron_variant | MODIFIER | NA18997.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0046 | 1 | 376 | 0.0027 | -31 | c.85- others(46): Show |
FUBP3 | ENSG00000107164.17 | transcript | ENST00000319725.10 | protein_coding | 1/18 | chr9 | TogoVar | |||||||
FUBP3_chr9_130574577_130643352 | 130589668 | TGTGTGTG others(24): Show |
T | intron_variant | MODIFIER | HG02300.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0157 | 1 | 304 | 0.0033 | -31 | c.85- others(46): Show |
FUBP3 | ENSG00000107164.17 | transcript | ENST00000319725.10 | protein_coding | 1/18 | chr9 | TogoVar | |||||||
FUT8_chr14_65407730_65749121 | 65656267 | ACAAAGTC others(24): Show |
A | intron_variant | MODIFIER | HG01884.hp2 | a0001 | a0001c0001 | a0001c0001t0025 | a0001c0001t0025g0360 | 1 | 372 | 0.0027 | -31 | c.598 others(50): Show |
FUT8 | ENSG00000033170.17 | transcript | ENST00000673929.1 | protein_coding | 6/10 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
FXYD3_chr19_35110823_35129324 | 35128406 | CACCTCTT others(24): Show |
C | downstream_gene_variant | MODIFIER | NA18522.hp1 | a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0037 | 1 | 412 | 0.0024 | -31 | c.*49 others(42): Show |
FXYD3 | ENSG00000089356.19 | transcript | ENST00000604404.6 | protein_coding | 4083 | chr19 | TogoVar | |||||||
GAB2_chr11_78210293_78422820 | 78346690 | TATATATA others(24): Show |
T | intron_variant | MODIFIER | HG02572.hp2 HG03098.hp1 |
a0001 | a0001c0001a0001c0004 | a0001c0001t0046a0001c0004t0006 | a0001c0001t0046g0116 a0001c0004t0006g0104 |
2 | 282 | 0.0071 | -31 | c.76- others(48): Show |
GAB2 | ENSG00000033327.13 | transcript | ENST00000361507.5 | protein_coding | 1/9 | chr11 | TogoVar | |||||||
GAB2_chr11_78210293_78422820 | 78346693 | ATATATAT others(24): Show |
A | intron_variant | MODIFIER | HG03579.hp2 | a0001 | a0001c0004 | a0001c0004t0006 | a0001c0004t0006g0100 | 1 | 285 | 0.0035 | -31 | c.76- others(48): Show |
GAB2 | ENSG00000033327.13 | transcript | ENST00000361507.5 | protein_coding | 1/9 | chr11 | TogoVar | |||||||
GAB2_chr11_78210293_78422820 | 78346695 | ATATATAT others(24): Show |
A | intron_variant | MODIFIER | HG02055.hp2 HG02630.hp2 HG02976.hp2 others(4): Show |
a0001 | a0001c0002a0001c0003 | a0001c0002t0009a0001c0003t0020 | a0001c0002t0009g0135 a0001c0002t0009g0136 a0001c0002t0009g0137 others(4): Show |
7 | 284 | 0.0246 | -31 | c.76- others(48): Show |
GAB2 | ENSG00000033327.13 | transcript | ENST00000361507.5 | protein_coding | 1/9 | chr11 | TogoVar | |||||||
GAB3_chrX_154670249_154756077 | 154710072 | AATGCATA others(24): Show |
A | intron_variant | MODIFIER | HG01358.hp1 HG02602.hp1 HG02698.hp1 others(7): Show |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0017 a0001c0001t0002g0067 a0001c0001t0002g0068 others(7): Show |
10 | 255 | 0.0392 | -31 | c.106 others(50): Show |
GAB3 | ENSG00000160219.12 | transcript | ENST00000424127.3 | protein_coding | 4/9 | chrX | TogoVar | |||||||
GABBR2_chr9_98283109_98713935 | 98421305 | ATAAAAAT others(24): Show |
A | intron_variant | MODIFIER | HG02895.hp1 HG03139.hp2 HG03209.hp2 others(2): Show |
a0001a0002 | a0001c0001a0001c0003a0001c0007others(1): Show | a0001c0001t0004a0001c0001t0013a0001c0003t0013others(2): Show | a0001c0001t0004g0045 a0001c0001t0013g0035 a0001c0003t0013g0041 others(2): Show |
5 | 162 | 0.0309 | -31 | c.123 others(52): Show |
GABBR2 | ENSG00000136928.7 | transcript | ENST00000259455.4 | protein_coding | 7/18 | chr9 | TogoVar | |||||||
GABPB1_chr15_50270389_50360198 | 50337098 | TATATATA others(24): Show |
T | intron_variant | MODIFIER | NA18991.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0203 | 1 | 366 | 0.0027 | -31 | c.-1+ others(48): Show |
GABPB1 | ENSG00000104064.18 | transcript | ENST00000380877.8 | protein_coding | 1/8 | chr15 | TogoVar | |||||||
GABRA2_chr4_46238548_46395128 | 46377590 | TCCGGCAG others(24): Show |
T | intron_variant | MODIFIER | HG00544.hp1 | a0001 | a0001c0001 | a0001c0001t0009 | a0001c0001t0009g0111 | 1 | 256 | 0.0039 | -31 | c.187 others(48): Show |
GABRA2 | ENSG00000151834.16 | transcript | ENST00000381620.9 | protein_coding | 3/9 | chr4 | TogoVar | |||||||
GABRA5_chr15_26862062_26954208 | 26896925 | TATGTAGA others(24): Show |
T | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00280.hp1 others(166): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(5): Show | a0001c0001t0001a0001c0001t0003a0001c0002t0001others(6): Show | a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0006 others(162): Show |
169 | 369 | 0.4580 | -31 | c.497 others(50): Show |
GABRA5 | ENSG00000186297.12 | transcript | ENST00000335625.10 | protein_coding | 6/10 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
GABRA5_chr15_26862062_26954208 | 26896954 | CAGATGTA others(24): Show |
C | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00280.hp2 others(131): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(5): Show | a0001c0001t0001a0001c0001t0004a0001c0001t0006others(9): Show | a0001c0001t0001g0007 a0001c0001t0001g0017 a0001c0001t0001g0018 others(129): Show |
134 | 368 | 0.3641 | -31 | c.497 others(50): Show |
GABRA5 | ENSG00000186297.12 | transcript | ENST00000335625.10 | protein_coding | 6/10 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
GABRB1_chr4_47026567_47431447 | 47195430 | AGATAGAT others(24): Show |
A | intron_variant | MODIFIER | HG00438.hp2 HG00639.hp2 HG00735.hp2 others(25): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(9): Show | a0001c0001t0001g0061 a0001c0001t0001g0063 a0001c0001t0001g0067 others(25): Show |
28 | 156 | 0.1795 | -31 | c.461 others(50): Show |
GABRB1 | ENSG00000163288.14 | transcript | ENST00000295454.8 | protein_coding | 4/8 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
GABRB1_chr4_47026567_47431447 | 47401809 | TATCTATC others(24): Show |
T | intron_variant | MODIFIER | HG03579.hp2 | a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0075 | 1 | 156 | 0.0064 | -31 | c.545 others(48): Show |
GABRB1 | ENSG00000163288.14 | transcript | ENST00000295454.8 | protein_coding | 5/8 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
GABRB3_chr15_26538552_26778066 | 26716783 | GACAGCCC others(24): Show |
G | intron_variant | MODIFIER | HG02109.hp1 HG02965.hp1 HG03579.hp2 others(1): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0003a0001c0001t0008others(1): Show | a0001c0001t0001g0016 a0001c0001t0003g0191 a0001c0001t0008g0190 others(1): Show |
4 | 144 | 0.0278 | -31 | c.240 others(50): Show |
GABRB3 | ENSG00000166206.16 | transcript | ENST00000311550.10 | protein_coding | 3/8 | chr15 | TogoVar | |||||||
GABRB3_chr15_26538552_26778066 | 26716891 | AGGACCTC others(24): Show |
A | intron_variant | MODIFIER | HG02976.hp1 | a0001 | a0001c0001 | a0001c0001t0019 | a0001c0001t0019g0072 | 1 | 200 | 0.0050 | -31 | c.240 others(50): Show |
GABRB3 | ENSG00000166206.16 | transcript | ENST00000311550.10 | protein_coding | 3/8 | chr15 | TogoVar | |||||||
GABRB3_chr15_26538552_26778066 | 26717249 | TATGACAG others(24): Show |
T | intron_variant | MODIFIER | HG04115.hp2 | a0001 | a0001c0001 | a0001c0001t0009 | a0001c0001t0009g0166 | 1 | 202 | 0.0050 | -31 | c.240 others(50): Show |
GABRB3 | ENSG00000166206.16 | transcript | ENST00000311550.10 | protein_coding | 3/8 | chr15 | TogoVar | |||||||
GABRB3_chr15_26538552_26778066 | 26764164 | AAAAAAAA others(24): Show |
A | intron_variant | MODIFIER | HG00558.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0178 | 1 | 191 | 0.0052 | -31 | c.240 others(48): Show |
GABRB3 | ENSG00000166206.16 | transcript | ENST00000311550.10 | protein_coding | 3/8 | chr15 | TogoVar | |||||||
GABRB3_chr15_26538552_26778066 | 26764168 | AAAAAAAA others(24): Show |
A | intron_variant | MODIFIER | HG00733.hp1 | a0001 | a0001c0001 | a0001c0001t0006 | a0001c0001t0006g0042 | 1 | 199 | 0.0050 | -31 | c.240 others(48): Show |
GABRB3 | ENSG00000166206.16 | transcript | ENST00000311550.10 | protein_coding | 3/8 | chr15 | TogoVar | |||||||
GABRG3_chr15_26966181_27546984 | 27307858 | TAAATATA others(24): Show |
T | intron_variant | MODIFIER | HG02572.hp1 | a0001 | a0001c0004 | a0001c0004t0011 | a0001c0004t0011g0060 | 1 | 90 | 0.0111 | -31 | c.271 others(50): Show |
GABRG3 | ENSG00000182256.13 | transcript | ENST00000615808.5 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
GABRG3_chr15_26966181_27546984 | 27308599 | CATAATGT others(24): Show |
C | intron_variant | MODIFIER | HG01884.hp1 HG02145.hp1 |
a0001 | a0001c0003a0001c0005 | a0001c0003t0019a0001c0005t0005 | a0001c0003t0019g0064 a0001c0005t0005g0045 |
2 | 92 | 0.0217 | -31 | c.271 others(50): Show |
GABRG3 | ENSG00000182256.13 | transcript | ENST00000615808.5 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
GABRG3_chr15_26966181_27546984 | 27308721 | CATAATGT others(24): Show |
C | intron_variant | MODIFIER | HG03704.hp2 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0083 | 1 | 91 | 0.0110 | -31 | c.271 others(50): Show |
GABRG3 | ENSG00000182256.13 | transcript | ENST00000615808.5 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
GAGE12E_chrX_49546289_49563645 | 49557351 | TATTTATT others(24): Show |
T | intron_variant | MODIFIER | HG00280.hp1 HG00438.hp1 HG00544.hp2 others(38): Show |
a0001a0004a0005others(4): Show | a0001c0001a0004c0004a0005c0005others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(9): Show | a0001c0001t0001g0021 a0001c0001t0001g0040 a0001c0001t0002g0004 others(33): Show |
41 | 100 | 0.4100 | -31 | c.332 others(48): Show |
GAGE12E | ENSG00000216649.5 | transcript | ENST00000381698.5 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
GAGE12F_chrX_49555842_49573205 | 49557351 | TATTTATT others(24): Show |
T | upstream_gene_variant | MODIFIER | HG00280.hp1 HG00438.hp1 HG00544.hp1 others(52): Show |
a0001a0002a0004others(4): Show | a0001c0001a0002c0003a0002c0007others(5): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(11): Show | a0001c0001t0001g0009 a0001c0001t0001g0038 a0001c0001t0001g0078 others(47): Show |
55 | 99 | 0.5556 | -31 | c.-36 others(42): Show |
GAGE12F | ENSG00000236362.9 | transcript | ENST00000440137.2 | protein_coding | 3490 | chrX | TogoVar | |||||||
GAK_chr4_844277_937316 | 914445 | CCACACAC others(24): Show |
C | intron_variant | MODIFIER | HG02135.hp1 HG03704.hp1 HG03710.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0007 | a0001c0001t0001g0350 a0001c0001t0001g0352 a0001c0001t0007g0351 |
3 | 387 | 0.0078 | -31 | c.146 others(46): Show |
GAK | ENSG00000178950.18 | transcript | ENST00000314167.9 | protein_coding | 1/27 | chr4 | TogoVar | |||||||
GAK_chr4_844277_937316 | 914463 | TGTGCACG others(24): Show |
T | intron_variant | MODIFIER | HG02074.hp1 HG02132.hp2 HG02165.hp2 |
a0001a0012a0014 | a0001c0001a0012c0039a0014c0041 | a0001c0001t0001a0012c0039t0001a0014c0041t0001 | a0001c0001t0001g0323 a0012c0039t0001g0324 a0014c0041t0001g0320 |
3 | 387 | 0.0078 | -31 | c.146 others(46): Show |
GAK | ENSG00000178950.18 | transcript | ENST00000314167.9 | protein_coding | 1/27 | chr4 | TogoVar | |||||||
GAL3ST2_chr2_241771822_241809287 | 241805372 | CCCCTCAG others(24): Show |
C | downstream_gene_variant | MODIFIER | HG00741.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0156 | 1 | 297 | 0.0034 | -31 | c.*12 others(42): Show |
GAL3ST2 | ENSG00000154252.12 | transcript | ENST00000192314.7 | protein_coding | 1086 | chr2 | TogoVar | |||||||
GAL3ST2_chr2_241771822_241809287 | 241805525 | TCCCCCCT others(24): Show |
T | downstream_gene_variant | MODIFIER | HG01255.hp2 HG03098.hp1 NA18939.hp2 others(1): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0002c0002t0002 | a0001c0001t0001g0020 a0001c0001t0001g0170 a0001c0001t0001g0180 others(1): Show |
4 | 267 | 0.0150 | -31 | c.*13 others(42): Show |
GAL3ST2 | ENSG00000154252.12 | transcript | ENST00000192314.7 | protein_coding | 1239 | chr2 | TogoVar | |||||||
GAL3ST2_chr2_241771822_241809287 | 241805560 | TCCCCCCT others(24): Show |
T | downstream_gene_variant | MODIFIER | HG02622.hp1 HG03209.hp2 |
a0002a0007 | a0002c0002a0007c0008 | a0002c0002t0002a0007c0008t0001 | a0002c0002t0002g0025 a0007c0008t0001g0068 |
2 | 288 | 0.0069 | -31 | c.*13 others(42): Show |
GAL3ST2 | ENSG00000154252.12 | transcript | ENST00000192314.7 | protein_coding | 1274 | chr2 | TogoVar | |||||||
GAL3ST2_chr2_241771822_241809287 | 241805638 | TCCCCCCT others(24): Show |
T | downstream_gene_variant | MODIFIER | HG03209.hp2 NA18950.hp1 |
a0002a0003 | a0002c0002a0003c0003 | a0002c0002t0002a0003c0003t0001 | a0002c0002t0002g0025 a0003c0003t0001g0211 |
2 | 278 | 0.0072 | -31 | c.*14 others(42): Show |
GAL3ST2 | ENSG00000154252.12 | transcript | ENST00000192314.7 | protein_coding | 1352 | chr2 | TogoVar | |||||||
GAL3ST2_chr2_241771822_241809287 | 241805673 | TCCCCCCT others(24): Show |
T | downstream_gene_variant | MODIFIER | HG00323.hp1 HG02004.hp1 HG03098.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0020 a0001c0001t0001g0172 a0001c0001t0001g0188 others(1): Show |
4 | 296 | 0.0135 | -31 | c.*15 others(42): Show |
GAL3ST2 | ENSG00000154252.12 | transcript | ENST00000192314.7 | protein_coding | 1387 | chr2 | TogoVar | |||||||
GAL3ST2_chr2_241771822_241809287 | 241805751 | TCCCCCCT others(24): Show |
T | downstream_gene_variant | MODIFIER | HG03209.hp2 | a0002 | a0002c0002 | a0002c0002t0002 | a0002c0002t0002g0025 | 1 | 282 | 0.0035 | -31 | c.*15 others(42): Show |
GAL3ST2 | ENSG00000154252.12 | transcript | ENST00000192314.7 | protein_coding | 1465 | chr2 | TogoVar | |||||||
GAL3ST2_chr2_241771822_241809287 | 241805786 | TCCCCCCT others(24): Show |
T | downstream_gene_variant | MODIFIER | HG00323.hp1 HG00639.hp2 NA18950.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0170 a0001c0001t0001g0188 a0001c0001t0002g0154 |
3 | 307 | 0.0098 | -31 | c.*16 others(42): Show |
GAL3ST2 | ENSG00000154252.12 | transcript | ENST00000192314.7 | protein_coding | 1500 | chr2 | TogoVar | |||||||
GAL3ST2_chr2_241771822_241809287 | 241806123 | TCCCCCCT others(24): Show |
T | downstream_gene_variant | MODIFIER | HG00639.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0154 | 1 | 283 | 0.0035 | -31 | c.*19 others(42): Show |
GAL3ST2 | ENSG00000154252.12 | transcript | ENST00000192314.7 | protein_coding | 1837 | chr2 | TogoVar | |||||||
GAL3ST2_chr2_241771822_241809287 | 241806158 | TCCCCCCT others(24): Show |
T | downstream_gene_variant | MODIFIER | HG00673.hp1 HG03486.hp2 NA18948.hp1 |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0002c0002t0001 | a0001c0001t0001g0144 a0001c0001t0001g0193 a0002c0002t0001g0103 |
3 | 273 | 0.0110 | -31 | c.*19 others(42): Show |
GAL3ST2 | ENSG00000154252.12 | transcript | ENST00000192314.7 | protein_coding | 1872 | chr2 | TogoVar | |||||||
GAL3ST2_chr2_241771822_241809287 | 241806193 | TCCCCCCT others(24): Show |
T | downstream_gene_variant | MODIFIER | HG00673.hp2 HG02109.hp1 HG02735.hp2 others(7): Show |
a0001a0002a0003 | a0001c0001a0002c0002a0003c0003 | a0001c0001t0001a0001c0001t0002a0002c0002t0001others(2): Show | a0001c0001t0001g0170 a0001c0001t0001g0173 a0001c0001t0002g0002 others(7): Show |
10 | 311 | 0.0322 | -31 | c.*20 others(42): Show |
GAL3ST2 | ENSG00000154252.12 | transcript | ENST00000192314.7 | protein_coding | 1907 | chr2 | TogoVar | |||||||
GAL3ST2_chr2_241771822_241809287 | 241806231 | CCCCTCAG others(24): Show |
C | downstream_gene_variant | MODIFIER | NA19088.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0189 | 1 | 303 | 0.0033 | -31 | c.*20 others(42): Show |
GAL3ST2 | ENSG00000154252.12 | transcript | ENST00000192314.7 | protein_coding | 1945 | chr2 | TogoVar | |||||||
GAL3ST2_chr2_241771822_241809287 | 241806501 | TCCCCCCT others(24): Show |
T | downstream_gene_variant | MODIFIER | HG02622.hp1 HG02809.hp1 |
a0001a0007 | a0001c0001a0007c0008 | a0001c0001t0001a0007c0008t0001 | a0001c0001t0001g0033 a0007c0008t0001g0068 |
2 | 275 | 0.0073 | -31 | c.*23 others(42): Show |
GAL3ST2 | ENSG00000154252.12 | transcript | ENST00000192314.7 | protein_coding | 2215 | chr2 | TogoVar | |||||||
GAL3ST2_chr2_241771822_241809287 | 241806539 | CCCCTCAG others(24): Show |
C | downstream_gene_variant | MODIFIER | HG00639.hp2 HG00733.hp1 HG02027.hp2 others(5): Show |
a0001a0002a0003 | a0001c0001a0002c0002a0003c0003 | a0001c0001t0001a0001c0001t0002a0002c0002t0001others(2): Show | a0001c0001t0001g0001 a0001c0001t0001g0012 a0001c0001t0001g0217 others(5): Show |
8 | 296 | 0.0270 | -31 | c.*23 others(42): Show |
GAL3ST2 | ENSG00000154252.12 | transcript | ENST00000192314.7 | protein_coding | 2253 | chr2 | TogoVar | |||||||
GAL3ST2_chr2_241771822_241809287 | 241806614 | TCCCCCCT others(24): Show |
T | downstream_gene_variant | MODIFIER | HG02132.hp2 HG03195.hp1 NA18945.hp2 |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0002a0002c0002t0002 | a0001c0001t0002g0002 a0002c0002t0002g0011 a0002c0002t0002g0118 |
3 | 282 | 0.0106 | -31 | c.*24 others(42): Show |
GAL3ST2 | ENSG00000154252.12 | transcript | ENST00000192314.7 | protein_coding | 2328 | chr2 | TogoVar | |||||||
GAL3ST2_chr2_241771822_241809287 | 241806649 | TCCCCCCT others(24): Show |
T | downstream_gene_variant | MODIFIER | HG00733.hp1 HG03195.hp2 HG03834.hp2 others(3): Show |
a0001a0002a0003 | a0001c0001a0002c0002a0003c0003 | a0001c0001t0001a0001c0001t0002a0002c0002t0001others(2): Show | a0001c0001t0001g0217 a0001c0001t0002g0017 a0002c0002t0001g0009 others(3): Show |
6 | 304 | 0.0197 | -31 | c.*24 others(42): Show |
GAL3ST2 | ENSG00000154252.12 | transcript | ENST00000192314.7 | protein_coding | 2363 | chr2 | TogoVar | |||||||
GAL3ST2_chr2_241771822_241809287 | 241806727 | TCCCCCCT others(24): Show |
T | downstream_gene_variant | MODIFIER | HG03195.hp2 NA19005.hp1 |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0002a0002c0002t0002 | a0001c0001t0002g0017 a0002c0002t0002g0137 |
2 | 292 | 0.0068 | -31 | c.*25 others(42): Show |
GAL3ST2 | ENSG00000154252.12 | transcript | ENST00000192314.7 | protein_coding | 2441 | chr2 | TogoVar | |||||||
GAL3ST2_chr2_241771822_241809287 | 241806762 | TCCCCCCT others(24): Show |
T | downstream_gene_variant | MODIFIER | HG01346.hp2 HG02135.hp2 HG02622.hp1 others(2): Show |
a0001a0002a0003others(1): Show | a0001c0001a0002c0002a0003c0003others(1): Show | a0001c0001t0001a0001c0001t0002a0002c0002t0001others(2): Show | a0001c0001t0001g0002 a0001c0001t0002g0002 a0002c0002t0001g0094 others(2): Show |
5 | 311 | 0.0161 | -31 | c.*25 others(42): Show |
GAL3ST2 | ENSG00000154252.12 | transcript | ENST00000192314.7 | protein_coding | 2476 | chr2 | TogoVar | |||||||
GAL3ST2_chr2_241771822_241809287 | 241806992 | TCCCCCCT others(24): Show |
T | downstream_gene_variant | MODIFIER | HG00280.hp2 HG00735.hp2 HG01106.hp1 others(28): Show |
a0001a0002a0004others(1): Show | a0001c0001a0002c0002a0004c0004others(1): Show | a0001c0001t0001a0001c0001t0002a0002c0002t0001others(3): Show | a0001c0001t0001g0005 a0001c0001t0001g0012 a0001c0001t0001g0033 others(28): Show |
31 | 302 | 0.1026 | -31 | c.*28 others(42): Show |
GAL3ST2 | ENSG00000154252.12 | transcript | ENST00000192314.7 | protein_coding | 2706 | chr2 | TogoVar | |||||||
GAL3ST2_chr2_241771822_241809287 | 241808049 | CTCTCCCC others(24): Show |
C | downstream_gene_variant | MODIFIER | NA18939.hp2 NA18971.hp2 NA19089.hp1 |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0002c0002t0001a0002c0002t0002 | a0001c0001t0001g0005 a0002c0002t0001g0009 a0002c0002t0002g0016 |
3 | 312 | 0.0096 | -31 | c.*38 others(42): Show |
GAL3ST2 | ENSG00000154252.12 | transcript | ENST00000192314.7 | protein_coding | 3763 | chr2 | TogoVar | |||||||
GALK2_chr15_49165247_49336882 | 49277137 | ATTTTTTT others(24): Show |
A | intron_variant | MODIFIER | HG00558.hp2 HG00621.hp2 HG00642.hp1 others(36): Show |
a0001 | a0001c0001a0001c0005 | a0001c0001t0002a0001c0001t0007a0001c0001t0015others(4): Show | a0001c0001t0002g0048 a0001c0001t0002g0050 a0001c0001t0002g0051 others(36): Show |
39 | 40 | 0.9750 | -31 | c.505 others(48): Show |
GALK2 | ENSG00000156958.15 | transcript | ENST00000560031.6 | protein_coding | 5/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
GALM_chr2_38661114_38739765 | 38675524 | TTGTTTTT others(24): Show |
T | intron_variant | MODIFIER | HG02145.hp2 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0144 | 1 | 291 | 0.0034 | -31 | c.191 others(46): Show |
GALM | ENSG00000143891.17 | transcript | ENST00000272252.10 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
GALNS_chr16_88808734_88861947 | 88825253 | AGGGCTGG others(24): Show |
A | intron_variant | MODIFIER | HG03041.hp1 | a0009 | a0009c0015 | a0009c0015t0011 | a0009c0015t0011g0386 | 1 | 402 | 0.0025 | -31 | c.114 others(48): Show |
GALNS | ENSG00000141012.13 | transcript | ENST00000268695.10 | protein_coding | 10/13 | chr16 | TogoVar |