Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
KLHL15_chrX_23978720_24032186	23979583	AAAAAAAT others(24): Show AAAAAAATATATATATATATATATATATATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02451.hp1 HG02451.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0021 a0001c0001t0021	a0001c0001t0021g0159 a0001c0001t0021g0159	1	286	0.0035	-31	c.83 others(42): Show c.8307_*8337delATATATATATATATATATATATATATTTTTT	KLHL15	ENSG00000174010.10	transcript	ENST00000328046.8	protein_coding		4136		chrX	TogoVar
KLHL17_chr1_955584_970719	969248	GGGTTTAA others(24): Show GGGTTTAATCCACTGAGTCCAGATCTCACCAT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03654.hp2 HG03654.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0002 a0001c0002t0003g0002	1	432	0.0023	-31	c.40 others(42): Show c.4058_*4088delGGTTTAATCCACTGAGTCCAGATCTCACCAT	KLHL17	ENSG00000187961.15	transcript	ENST00000338591.8	protein_coding		3530		chr1	TogoVar
KLHL17_chr1_955584_970719	969630	GCAACTGT others(24): Show GCAACTGTGTATGTGTGCACGTGTGTATCCAT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03491.hp1 HG03491.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	432	0.0023	-31	c.44 others(42): Show c.4440_*4470delCAACTGTGTATGTGTGCACGTGTGTATCCAT	KLHL17	ENSG00000187961.15	transcript	ENST00000338591.8	protein_coding		3912		chr1	TogoVar
KLHL1_chr13_69695597_70113452	69955996	GATATATA others(24): Show GATATATATTTATATATATTTGATATATATTT	G G	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG00735.hp2 HG01175.hp1 others(9): Show HG00642.hp1 HG00735.hp2 HG01175.hp1 HG01243.hp2 HG01257.hp1 HG01358.hp1 HG01433.hp1 HG01891.hp1 HG02280.hp2 HG02572.hp2 HG03195.hp2 HG03490.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0001c0003 a0004c0008 a0001c0001 a0001c0003 a0004c0008	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0008 a0001c0001t0011 a0001c0003t0009 a0004c0008t0001	a0001c0001t0001g0055 a0001c0001t0001g0057 a0001c0001t0001g0059 others(9): Show a0001c0001t0001g0055 a0001c0001t0001g0057 a0001c0001t0001g0059 a0001c0001t0002g0073 a0001c0001t0003g0139 a0001c0001t0003g0140 a0001c0001t0003g0160 a0001c0001t0008g0061 a0001c0001t0008g0076 a0001c0001t0011g0161 a0001c0003t0009g0156 a0004c0008t0001g0100	12	182	0.0659	-31	c.817 others(48): Show c.817+5281_817+5311delAAATATATATCAAATATATATAAATATA TAT	KLHL1	ENSG00000150361.12	transcript	ENST00000377844.9	protein_coding	3/10			chr13	TogoVar
KLHL28_chr14_44919324_44966947	44961374	GGAGAGGC others(24): Show GGAGAGGCGGTTAGCTACAGGGGGAAAAAAAC	G G	intron_variant intron_variant	MODIFIER	NA19072.hp2 NA19072.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0009 a0002c0002t0009	a0002c0002t0009g0024 a0002c0002t0009g0024	1	224	0.0045	-31	c.-1+ others(44): Show c.-1+441_-1+471delGTTTTTTTCCCCCTGTAGCTAACCGCCTCTC	KLHL28	ENSG00000179454.14	transcript	ENST00000396128.9	protein_coding	1/4			chr14	TogoVar
KLHL35_chr11_75417394_75438203	75429256	TTTGAGGA others(24): Show TTTGAGGATCTCTGTCCCAGGCCCTGTGCTTA	T T	intron_variant intron_variant	MODIFIER	NA19075.hp1 NA19075.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0102 a0001c0001t0001g0102	1	420	0.0024	-31	c.881 others(46): Show c.881+462_881+492delTAAGCACAGGGCCTGGGACAGAGATCCTCA A	KLHL35	ENSG00000149243.17	transcript	ENST00000539798.3	protein_coding	2/6			chr11	TogoVar
KLHL6_chr3_183482551_183560706	183549531	CTGAGTCT others(24): Show CTGAGTCTTGCTCTGTTGCCCCGGCTGGAGTG	C C	intron_variant intron_variant	MODIFIER	NA19062.hp2 NA19062.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0230 a0001c0001t0001g0230	1	298	0.0034	-31	c.293 others(48): Show c.293+5799_293+5829delCACTCCAGCCGGGGCAACAGAGCAAGAC TCA	KLHL6	ENSG00000172578.12	transcript	ENST00000341319.8	protein_coding	1/6			chr3	TogoVar
KLK9_chr19_50997508_51014592	51001867	GAGAGGGG others(24): Show GAGAGGGGAGGAGGCTGGGGGCCTGGATTCCT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19089.hp1 NA19089.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0179 a0001c0002t0002g0179	1	438	0.0023	-31	c.12 others(42): Show c.1213_*1243delAGGAATCCAGGCCCCCAGCCTCCTCCCCTCT	KLK9	ENSG00000213022.6	transcript	ENST00000594211.2	protein_coding		640		chr19	TogoVar
KLRB1_chr12_9589551_9612916	9606703	ATATAAAA others(24): Show ATATAAAATATATAAAATATATGTATAAAAAG	A A	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG02572.hp2 HG03098.hp2 others(1): Show HG01243.hp2 HG02572.hp2 HG03098.hp2 HG03834.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0003 a0001c0001t0007 a0002c0002t0001 a0001c0001t0003 a0001c0001t0007 a0002c0002t0001	a0001c0001t0003g0337 a0001c0001t0007g0047 a0002c0002t0001g0336 a0001c0001t0003g0337 a0001c0001t0007g0047 a0002c0002t0001g0336	4	436	0.0092	-31	c.85+ others(46): Show c.85+1021_85+1051delCTTTTTATACATATATTTTATATATTTTAT A	KLRB1	ENSG00000111796.4	transcript	ENST00000229402.4	protein_coding	1/5			chr12	TogoVar
KNDC1_chr10_133155219_133231412	133200590	CGGGGGTG others(24): Show CGGGGGTGCCCAGCCAAAGGCCGCCCTCTCCT	C C	intron_variant intron_variant	MODIFIER	HG02738.hp2 HG02738.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0276 a0001c0003t0001g0276	1	332	0.0030	-31	c.298 others(48): Show c.2989+184_2989+214delCCCTCTCCTGGGGGTGCCCAGCCAAAGG CCG	KNDC1	ENSG00000171798.19	transcript	ENST00000304613.8	protein_coding	16/29		INFO_REALIGN_3_PRIME	chr10	TogoVar
KNTC1_chr12_122522249_122631396	122579025	CTTTTTTT others(24): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00597.hp2 HG03491.hp2 HG03492.hp1 HG00597.hp2 HG03491.hp2 HG03492.hp1	a0001 a0009 a0001 a0009	a0001c0001 a0009c0014 a0001c0001 a0009c0014	a0001c0001t0001 a0009c0014t0001 a0001c0001t0001 a0009c0014t0001	a0001c0001t0001g0006 a0009c0014t0001g0003 a0001c0001t0001g0006 a0009c0014t0001g0003	3	320	0.0094	-31	c.284 others(48): Show c.2842-853_2842-823delTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTT	KNTC1	ENSG00000184445.12	transcript	ENST00000333479.12	protein_coding	31/63		INFO_REALIGN_3_PRIME	chr12	TogoVar
KPRP_chr1_152753025_152767056	152764300	GCCCAGGA others(24): Show GCCCAGGAACATTTGGTCATCACTGGTTTGGT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02895.hp1 HG02895.hp1	a0005 a0005	a0005c0007 a0005c0007	a0005c0007t0002 a0005c0007t0002	a0005c0007t0002g0005 a0005c0007t0002g0005	1	428	0.0023	-31	c.29 others(42): Show c.2973_*3003delCCCAGGAACATTTGGTCATCACTGGTTTGGT	KPRP	ENSG00000203786.7	transcript	ENST00000606109.2	protein_coding		2245		chr1	TogoVar
KRBA2_chr17_8353822_8381704	8373167	GTCTCCGT others(24): Show GTCTCCGTCTCCACGGTCTCCCTCTCCCTCTC	G G	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02258.hp1 HG02280.hp2 others(3): Show HG01243.hp1 HG02258.hp1 HG02280.hp2 HG02615.hp2 HG02630.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0191 a0001c0001t0011 a0001c0001t0191	a0001c0001t0011g0036 a0001c0001t0011g0318 a0001c0001t0011g0321 others(2): Show a0001c0001t0011g0036 a0001c0001t0011g0318 a0001c0001t0011g0321 a0001c0001t0011g0322 a0001c0001t0191g0240	6	388	0.0155	-31	c.-21 others(48): Show c.-21+2702_-21+2732delGAGAGGGAGAGGGAGACCGTGGAGACGG AGA	KRBA2	ENSG00000184619.8	transcript	ENST00000396267.3	protein_coding	1/1			chr17	TogoVar
KRT14_chr17_41577279_41591895	41580573	TCTGAGGA others(24): Show TCTGAGGAAGCACCCTCAAACCTTCCTCTTTC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02809.hp2 HG02886.hp1 HG02809.hp2 HG02886.hp1	a0001 a0001	a0001c0014 a0001c0014	a0001c0014t0001 a0001c0014t0001	a0001c0014t0001g0030 a0001c0014t0001g0030	2	330	0.0061	-31	c.18 others(42): Show c.1831_*1861delGAAAGAGGAAGGTTTGAGGGTGCTTCCTCAG	KRT14	ENSG00000186847.6	transcript	ENST00000167586.7	protein_coding		1705		chr17	TogoVar
KRT35_chr17_41471710_41486151	41483700	AGCGAGGG others(24): Show AGCGAGGGGGCGAGGTGTCTCCACAGCTGGAC	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02040.hp2 HG02040.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	448	0.0022	-31	c.-26 others(42): Show c.-2634_-2604delGTCCAGCTGTGGAGACACCTCGCCCCCTCGC	KRT35	ENSG00000197079.9	transcript	ENST00000246639.7	protein_coding		2550		chr17	TogoVar
KRT36_chr17_41481136_41494910	41483700	AGCGAGGG others(24): Show AGCGAGGGGGCGAGGTGTCTCCACAGCTGGAC	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02040.hp2 HG02040.hp2	a0006 a0006	a0006c0007 a0006c0007	a0006c0007t0001 a0006c0007t0001	a0006c0007t0001g0012 a0006c0007t0001g0012	1	466	0.0022	-31	c.26 others(42): Show c.2645_*2675delGTCCAGCTGTGGAGACACCTCGCCCCCTCGC	KRT36	ENSG00000126337.14	transcript	ENST00000328119.11	protein_coding		2435		chr17	TogoVar
KRTAP9-1_chr17_41184887_41195639	41195538	GTCCTGCA others(24): Show GTCCTGCACATGTACCCTTGAACTTAAAATAA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18985.hp2 NA18985.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0000 a0001c0001t0000	a0001c0001t0000g0000 a0001c0001t0000g0000	1	460	0.0022	-31	c.49 others(42): Show c.4900_*4930delTCCTGCACATGTACCCTTGAACTTAAAATAA	KRTAP9-1	ENSG00000240542.6	transcript	ENST00000398470.1	protein_coding		4900		chr17	TogoVar
KSR2_chr12_117448012_117973990	117740630	GTAATATA others(24): Show GTAATATATACATATATTATATATGTAATATA	G G	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02886.hp1 HG02630.hp1 HG02886.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0087 a0001c0001t0099 a0001c0001t0087 a0001c0001t0099	a0001c0001t0087g0060 a0001c0001t0099g0131 a0001c0001t0087g0060 a0001c0001t0099g0131	2	196	0.0102	-31	c.986 others(50): Show c.986+20350_986+20380delTATATTACATATATAATATATGTATA TATTA	KSR2	ENSG00000171435.15	transcript	ENST00000339824.7	protein_coding	4/19			chr12	TogoVar
KSR2_chr12_117448012_117973990	117793898	ACATGCAC others(24): Show ACATGCACACTCACACCAACATGCACACACAC	A A	intron_variant intron_variant	MODIFIER	HG01109.hp2 NA18975.hp2 NA19081.hp2 others(1): Show HG01109.hp2 NA18975.hp2 NA19081.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 a0001c0001 a0001c0002 a0001c0004	a0001c0001t0092 a0001c0001t0095 a0001c0002t0040 others(1): Show a0001c0001t0092 a0001c0001t0095 a0001c0002t0040 a0001c0004t0082	a0001c0001t0092g0137 a0001c0001t0095g0151 a0001c0002t0040g0024 others(1): Show a0001c0001t0092g0137 a0001c0001t0095g0151 a0001c0002t0040g0024 a0001c0004t0082g0078	4	196	0.0204	-31	c.473 others(50): Show c.473-32405_473-32375delGTGTGTGTGCATGTTGGTGTGAGTGT GCATG	KSR2	ENSG00000171435.15	transcript	ENST00000339824.7	protein_coding	3/19			chr12	TogoVar
KSR2_chr12_117448012_117973990	117793909	CACACCAA others(24): Show CACACCAACATGCACACACACCATGCACACAT	C C	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG03486.hp1 HG02615.hp1 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0008 a0001c0001 a0001c0008	a0001c0001t0127 a0001c0008t0037 a0001c0001t0127 a0001c0008t0037	a0001c0001t0127g0120 a0001c0008t0037g0004 a0001c0001t0127g0120 a0001c0008t0037g0004	2	196	0.0102	-31	c.473 others(50): Show c.473-32416_473-32386delATGTGTGCATGGTGTGTGTGCATGTT GGTGT	KSR2	ENSG00000171435.15	transcript	ENST00000339824.7	protein_coding	3/19			chr12	TogoVar
KSR2_chr12_117448012_117973990	117794473	CCAACATG others(24): Show CCAACATGCACACTCACACCAACATGCACACA	C C	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00544.hp1 HG02015.hp1 others(2): Show HG00438.hp1 HG00544.hp1 HG02015.hp1 NA19011.hp2 NA19065.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0008 a0001c0001t0046 a0001c0002t0033 others(2): Show a0001c0001t0008 a0001c0001t0046 a0001c0002t0033 a0001c0002t0062 a0001c0002t0122	a0001c0001t0008g0103 a0001c0001t0046g0028 a0001c0002t0033g0014 others(2): Show a0001c0001t0008g0103 a0001c0001t0046g0028 a0001c0002t0033g0014 a0001c0002t0062g0056 a0001c0002t0122g0162	5	196	0.0255	-31	c.473 others(50): Show c.473-32980_473-32950delTGTGTGCATGTTGGTGTGAGTGTGCA TGTTG	KSR2	ENSG00000171435.15	transcript	ENST00000339824.7	protein_coding	3/19			chr12	TogoVar
KYAT1_chr9_128827942_128886950	128865324	TATATATA others(24): Show TATATATATATATATATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG01175.hp2 NA18985.hp2 HG01175.hp2 NA18985.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0121 a0001c0001t0001g0276 a0001c0001t0001g0121 a0001c0001t0001g0276	2	326	0.0061	-31	c.-7+ others(48): Show c.-7+16542_-7+16572delTATATATATATATATATATATATATATA TAT	KYAT1	ENSG00000171097.14	transcript	ENST00000302586.8	protein_coding	1/12			chr9	TogoVar
KYAT1_chr9_128827942_128886950	128865326	TATATATA others(24): Show TATATATATATATATATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG01515.hp2 HG02145.hp1 HG04199.hp1 others(4): Show HG01515.hp2 HG02145.hp1 HG04199.hp1 NA18952.hp2 NA18989.hp2 NA19000.hp2 NA19012.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0038 a0001c0001t0001g0080 a0001c0001t0001g0112 others(4): Show a0001c0001t0001g0038 a0001c0001t0001g0080 a0001c0001t0001g0112 a0001c0001t0001g0117 a0001c0001t0001g0130 a0001c0001t0001g0265 a0001c0001t0001g0278	7	326	0.0215	-31	c.-7+ others(48): Show c.-7+16540_-7+16570delTATATATATATATATATATATATATATA TAT	KYAT1	ENSG00000171097.14	transcript	ENST00000302586.8	protein_coding	1/12			chr9	TogoVar
KYAT1_chr9_128827942_128886950	128865328	TATATATA others(24): Show TATATATATATATATATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG01433.hp2 NA18969.hp2 NA18972.hp1 HG01433.hp2 NA18969.hp2 NA18972.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0064 a0001c0001t0001g0105 a0001c0001t0001g0118 a0001c0001t0001g0064 a0001c0001t0001g0105 a0001c0001t0001g0118	3	326	0.0092	-31	c.-7+ others(48): Show c.-7+16538_-7+16568delTATATATATATATATATATATATATATA TAT	KYAT1	ENSG00000171097.14	transcript	ENST00000302586.8	protein_coding	1/12			chr9	TogoVar
KYNU_chr2_142872664_143060833	142980205	TAGCTTAT others(24): Show TAGCTTATAATGCTAATAATTAGCTTATAATG	T T	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG02615.hp1 HG02630.hp2 others(8): Show HG01261.hp2 HG02615.hp1 HG02630.hp2 HG02717.hp1 HG02965.hp2 HG02970.hp2 HG03130.hp1 HG03486.hp2 HG03516.hp1 HG06807.hp1 NA20129.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0023 a0001c0001t0035 a0001c0001t0106 others(5): Show a0001c0001t0023 a0001c0001t0035 a0001c0001t0106 a0001c0001t0117 a0001c0001t0123 a0001c0001t0127 a0001c0001t0131 a0002c0002t0061	a0001c0001t0023g0078 a0001c0001t0023g0081 a0001c0001t0023g0091 others(8): Show a0001c0001t0023g0078 a0001c0001t0023g0081 a0001c0001t0023g0091 a0001c0001t0035g0079 a0001c0001t0035g0080 a0001c0001t0106g0086 a0001c0001t0117g0075 a0001c0001t0123g0082 a0001c0001t0127g0076 a0001c0001t0131g0083 a0002c0002t0061g0181	11	332	0.0331	-31	c.730 others(48): Show c.730-4844_730-4814delTTATAATGCTAATAATTAGCTTATAATG AGC	KYNU	ENSG00000115919.15	transcript	ENST00000264170.9	protein_coding	8/13		INFO_REALIGN_3_PRIME	chr2	TogoVar
LAMA4_chr6_112102931_112259567	112163326	TAAAAAAA others(24): Show TAAAAAAAAATTAAAAACAAACAAAACCCAGA	T T	intron_variant intron_variant	MODIFIER	HG02809.hp1 HG03139.hp1 NA18906.hp2 HG02809.hp1 HG03139.hp1 NA18906.hp2	a0007 a0008 a0023 a0007 a0008 a0023	a0007c0060 a0008c0031 a0023c0032 a0007c0060 a0008c0031 a0023c0032	a0007c0060t0002 a0008c0031t0001 a0023c0032t0001 a0007c0060t0002 a0008c0031t0001 a0023c0032t0001	a0007c0060t0002g0260 a0008c0031t0001g0056 a0023c0032t0001g0060 a0007c0060t0002g0260 a0008c0031t0001g0056 a0023c0032t0001g0060	3	314	0.0096	-31	c.166 others(50): Show c.1668+1803_1668+1833delTCTGGGTTTTGTTTGTTTTTAATTTT TTTTT	LAMA4	ENSG00000112769.20	transcript	ENST00000230538.12	protein_coding	13/38			chr6	TogoVar
LAMB4_chr7_108018553_108135361	108043545	GTTTTTTT others(24): Show GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG02683.hp2 HG02683.hp2	a0011 a0011	a0011c0014 a0011c0014	a0011c0014t0001 a0011c0014t0001	a0011c0014t0001g0242 a0011c0014t0001g0242	1	292	0.0034	-31	c.447 others(48): Show c.4471+176_4471+206delAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAA	LAMB4	ENSG00000091128.13	transcript	ENST00000388781.8	protein_coding	29/33			chr7	TogoVar
LAMC1_chr1_183018420_183150592	183149483	ACACACCA others(24): Show ACACACCACACAGCTCACACCCCTCTCCTCCT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00280.hp2 HG00280.hp2	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0001 a0002c0001t0001	a0002c0001t0001g0205 a0002c0001t0001g0205	1	308	0.0033	-31	c.66 others(42): Show c.6694_*6724delCACACCACACAGCTCACACCCCTCTCCTCCT	LAMC1	ENSG00000135862.6	transcript	ENST00000258341.5	protein_coding		3892		chr1	TogoVar
LAMC1_chr1_183018420_183150592	183150012	TCTCCTCA others(24): Show TCTCCTCACACACCAGACAGCTCACACCCCTC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01243.hp2 HG02895.hp2 HG01243.hp2 HG02895.hp2	a0002 a0002	a0002c0001 a0002c0023 a0002c0001 a0002c0023	a0002c0001t0001 a0002c0023t0001 a0002c0001t0001 a0002c0023t0001	a0002c0001t0001g0114 a0002c0023t0001g0170 a0002c0001t0001g0114 a0002c0023t0001g0170	2	308	0.0065	-31	c.72 others(42): Show c.7223_*7253delCTCCTCACACACCAGACAGCTCACACCCCTC	LAMC1	ENSG00000135862.6	transcript	ENST00000258341.5	protein_coding		4421		chr1	TogoVar
LAMP1_chr13_113292239_113328672	113301639	AAAAAAAT others(24): Show AAAAAAATATATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG03098.hp1 HG03098.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0002 a0003c0003t0002	a0003c0003t0002g0332 a0003c0003t0002g0332	1	354	0.0028	-31	c.61+ others(46): Show c.61+4146_61+4176delAAAAATATATATATATATATATATATATAT A	LAMP1	ENSG00000185896.11	transcript	ENST00000332556.5	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr13	TogoVar
LAMP1_chr13_113292239_113328672	113301641	AAAAATAT others(24): Show AAAAATATATATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG01884.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0025 a0001c0001t0025	a0001c0001t0025g0313 a0001c0001t0025g0313	1	354	0.0028	-31	c.61+ others(46): Show c.61+4148_61+4178delAAATATATATATATATATATATATATATAT A	LAMP1	ENSG00000185896.11	transcript	ENST00000332556.5	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr13	TogoVar
LAMP1_chr13_113292239_113328672	113326362	TGGAGGGT others(24): Show TGGAGGGTGGCGCGGTGGGGGGGGGGGGGGCG	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00140.hp1 HG00639.hp1 HG01069.hp2 others(43): Show HG00140.hp1 HG00639.hp1 HG01069.hp2 HG01071.hp2 HG01074.hp2 HG01175.hp2 HG01433.hp2 HG01891.hp2 HG02055.hp1 HG02055.hp2 HG02280.hp2 HG02293.hp1 HG02451.hp1 HG02559.hp1 HG02559.hp2 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02723.hp2 HG02735.hp2 HG02809.hp2 HG02818.hp2 HG02886.hp2 HG02895.hp2 HG02922.hp1 HG02965.hp2 HG02976.hp2 HG03041.hp1 HG03098.hp2 HG03130.hp1 HG03139.hp2 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03471.hp1 HG03516.hp2 HG03540.hp2 NA18522.hp1 NA18906.hp2 NA19030.hp1 NA19043.hp1 NA19240.hp1 NA20129.hp1 NA20300.hp1 NA20300.hp2 NA20805.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(6): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0010 a0001c0001t0011 a0001c0001t0013 a0001c0001t0014 a0003c0003t0002 a0003c0003t0005	a0001c0001t0001g0097 a0001c0001t0001g0107 a0001c0001t0001g0116 others(42): Show a0001c0001t0001g0097 a0001c0001t0001g0107 a0001c0001t0001g0116 a0001c0001t0001g0134 a0001c0001t0001g0188 a0001c0001t0001g0257 a0001c0001t0001g0258 a0001c0001t0003g0004 a0001c0001t0003g0042 a0001c0001t0003g0043 a0001c0001t0003g0055 a0001c0001t0003g0056 a0001c0001t0003g0061 a0001c0001t0003g0062 a0001c0001t0003g0063 a0001c0001t0003g0064 a0001c0001t0003g0065 a0001c0001t0003g0067 a0001c0001t0003g0068 a0001c0001t0003g0069 a0001c0001t0003g0072 a0001c0001t0003g0073 a0001c0001t0003g0074 a0001c0001t0004g0057 a0001c0001t0004g0059 a0001c0001t0004g0060 a0001c0001t0004g0066 a0001c0001t0004g0070 a0001c0001t0010g0071 a0001c0001t0011g0044 a0001c0001t0013g0058 a0001c0001t0014g0051 a0003c0003t0002g0333 a0003c0003t0005g0017 a0003c0003t0005g0319 a0003c0003t0005g0320 a0003c0003t0005g0322 a0003c0003t0005g0323 a0003c0003t0005g0325 a0003c0003t0005g0326 a0003c0003t0005g0327 a0003c0003t0005g0328 a0003c0003t0005g0329 a0003c0003t0005g0330 a0003c0003t0005g0331	46	354	0.1299	-31	c.39 others(42): Show c.3942_*3972delGGAGGGTGGCGCGGTGGGGGGGGGGGGGGCG	LAMP1	ENSG00000185896.11	transcript	ENST00000332556.5	protein_coding		2691		chr13	TogoVar
LANCL2_chr7_55360337_55438737	55396248	GGTCTTCA others(24): Show GGTCTTCATGGTGAGTATCAGAGACAACTCCC	G G	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00140.hp2 HG00408.hp1 others(54): Show HG00099.hp1 HG00140.hp2 HG00408.hp1 HG00609.hp1 HG01099.hp2 HG01106.hp1 HG01167.hp1 HG01243.hp1 HG01261.hp2 HG01515.hp2 HG02027.hp1 HG02129.hp2 HG02145.hp2 HG02683.hp2 HG02698.hp2 HG02735.hp2 HG03017.hp1 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03831.hp2 HG03834.hp1 HG03942.hp1 HG04184.hp1 HG04228.hp2 NA18612.hp1 NA18949.hp1 NA18954.hp2 NA18959.hp1 NA18964.hp2 NA18965.hp1 NA18968.hp1 NA18971.hp2 NA18973.hp1 NA18979.hp2 NA18980.hp1 NA18985.hp2 NA18993.hp2 NA18994.hp1 NA19000.hp2 NA19002.hp1 NA19004.hp1 NA19010.hp1 NA19056.hp1 NA19057.hp1 NA19060.hp2 NA19062.hp1 NA19063.hp1 NA19066.hp2 NA19068.hp2 NA19077.hp1 NA19080.hp2 NA19086.hp1 NA19088.hp2 NA19090.hp2 NA20300.hp1	a0001 a0006 a0007 others(1): Show a0001 a0006 a0007 a0009	a0001c0002 a0006c0008 a0007c0007 others(1): Show a0001c0002 a0006c0008 a0007c0007 a0009c0013	a0001c0002t0003 a0001c0002t0006 a0001c0002t0010 others(5): Show a0001c0002t0003 a0001c0002t0006 a0001c0002t0010 a0001c0002t0023 a0001c0002t0024 a0006c0008t0003 a0007c0007t0003 a0009c0013t0003	a0001c0002t0003g0012 a0001c0002t0003g0013 a0001c0002t0003g0014 others(52): Show a0001c0002t0003g0012 a0001c0002t0003g0013 a0001c0002t0003g0014 a0001c0002t0003g0020 a0001c0002t0003g0125 a0001c0002t0003g0126 a0001c0002t0003g0127 a0001c0002t0003g0128 a0001c0002t0003g0131 a0001c0002t0003g0132 a0001c0002t0003g0133 a0001c0002t0003g0134 a0001c0002t0003g0135 a0001c0002t0003g0136 a0001c0002t0003g0137 a0001c0002t0003g0138 a0001c0002t0003g0139 a0001c0002t0003g0140 a0001c0002t0003g0141 a0001c0002t0003g0142 a0001c0002t0003g0143 a0001c0002t0003g0144 a0001c0002t0003g0145 a0001c0002t0003g0146 a0001c0002t0003g0148 a0001c0002t0003g0149 a0001c0002t0003g0151 a0001c0002t0003g0152 a0001c0002t0003g0153 a0001c0002t0003g0156 a0001c0002t0003g0157 a0001c0002t0003g0158 a0001c0002t0003g0159 a0001c0002t0003g0160 a0001c0002t0003g0161 a0001c0002t0003g0162 a0001c0002t0003g0163 a0001c0002t0003g0165 a0001c0002t0003g0166 a0001c0002t0003g0167 a0001c0002t0003g0168 a0001c0002t0003g0169 a0001c0002t0003g0170 a0001c0002t0003g0175 a0001c0002t0003g0324 a0001c0002t0006g0154 a0001c0002t0006g0155 a0001c0002t0010g0129 a0001c0002t0010g0172 a0001c0002t0010g0194 a0001c0002t0023g0013 a0001c0002t0024g0147 a0006c0008t0003g0150 a0007c0007t0003g0019 a0009c0013t0003g0164	57	352	0.1619	-31	c.323 others(48): Show c.323-2174_323-2144delGTCTTCATGGTGAGTATCAGAGACAACT CCC	LANCL2	ENSG00000132434.10	transcript	ENST00000254770.3	protein_coding	2/8			chr7	TogoVar
LAPTM4A_chr2_20027650_20056628	20035592	TTCTACTG others(24): Show TTCTACTGAAAAGCATCAGCTATATTCATTTA	T T	intron_variant intron_variant	MODIFIER	NA18963.hp1 NA18963.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0144 a0001c0001t0001g0144	1	424	0.0024	-31	c.433 others(46): Show c.433-561_433-531delTAAATGAATATAGCTGATGCTTTTCAGTAG A	LAPTM4A	ENSG00000068697.7	transcript	ENST00000175091.5	protein_coding	4/6			chr2	TogoVar
LARP1_chr5_154750377_154822605	154757801	CCCCCCTG others(24): Show CCCCCCTGCTCCCCTTCCCCCCTGCTCCCCTT	C C	intron_variant intron_variant	MODIFIER	HG00597.hp2 HG00597.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0014	a0001c0001t0014g0266 a0001c0001t0014g0266	1	304	0.0033	-31	c.436 others(48): Show c.436+1614_436+1644delTGCTCCCCTTCCCCCCTGCTCCCCTTCC CCC	LARP1	ENSG00000155506.19	transcript	ENST00000518297.6	protein_coding	1/18		INFO_REALIGN_3_PRIME	chr5	TogoVar
LARP1_chr5_154750377_154822605	154757817	CCCCCCTG others(24): Show CCCCCCTGCTCCCCTTCCCCCCTGCTCCCCTT	C C	intron_variant intron_variant	MODIFIER	HG03831.hp2 HG03831.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0014	a0001c0001t0014g0263 a0001c0001t0014g0263	1	304	0.0033	-31	c.436 others(48): Show c.436+1630_436+1660delTGCTCCCCTTCCCCCCTGCTCCCCTTCC CCC	LARP1	ENSG00000155506.19	transcript	ENST00000518297.6	protein_coding	1/18		INFO_REALIGN_3_PRIME	chr5	TogoVar
LARP1_chr5_154750377_154822605	154757833	CCCCCCTG others(24): Show CCCCCCTGCTCCCCTTCCCCCCTGCTCCCCTT	C C	intron_variant intron_variant	MODIFIER	HG02293.hp1 NA19075.hp1 HG02293.hp1 NA19075.hp1	a0001 a0001	a0001c0001 a0001c0010 a0001c0001 a0001c0010	a0001c0001t0003 a0001c0010t0013 a0001c0001t0003 a0001c0010t0013	a0001c0001t0003g0267 a0001c0010t0013g0268 a0001c0001t0003g0267 a0001c0010t0013g0268	2	304	0.0066	-31	c.436 others(48): Show c.436+1646_436+1676delTGCTCCCCTTCCCCCCTGCTCCCCTTCC CCC	LARP1	ENSG00000155506.19	transcript	ENST00000518297.6	protein_coding	1/18		INFO_REALIGN_3_PRIME	chr5	TogoVar
LARP4_chr12_50395885_50485004	50436070	TGTGTGTG others(24): Show TGTGTGTGTGTGTGTGTGTGTGTATCCCGCTG	T T	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02258.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0020 a0001c0001t0020	a0001c0001t0020g0300 a0001c0001t0020g0300	1	318	0.0031	-31	c.535 others(46): Show c.535+466_535+496delTGTATCCCGCTGGTGTGTGTGTGTGTGTGT G	LARP4	ENSG00000161813.23	transcript	ENST00000398473.7	protein_coding	5/15		INFO_REALIGN_3_PRIME	chr12	TogoVar
LATS2_chr13_20968036_21066586	20969698	ATATATAT others(24): Show ATATATATATATATATATATATATATATATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02647.hp2 HG03139.hp1 NA19240.hp1 HG02647.hp2 HG03139.hp1 NA19240.hp1	a0004 a0005 a0004 a0005	a0004c0004 a0005c0016 a0004c0004 a0005c0016	a0004c0004t0014 a0004c0004t0028 a0005c0016t0014 a0004c0004t0014 a0004c0004t0028 a0005c0016t0014	a0004c0004t0014g0299 a0004c0004t0028g0025 a0005c0016t0014g0036 a0004c0004t0014g0299 a0004c0004t0028g0025 a0005c0016t0014g0036	3	316	0.0095	-31	c.51 others(42): Show c.5141_*5171delATATATATATATATATATATATATATATATA	LATS2	ENSG00000150457.9	transcript	ENST00000382592.5	protein_coding		3337		chr13	TogoVar
LATS2_chr13_20968036_21066586	21007721	TAGTATAT others(24): Show TAGTATATATATATAGTATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG00621.hp2 HG01257.hp2 HG02027.hp1 others(7): Show HG00621.hp2 HG01257.hp2 HG02027.hp1 HG02071.hp2 HG02135.hp2 HG02738.hp2 HG03710.hp2 HG03927.hp2 NA19012.hp1 NA19085.hp1	a0001 a0003 a0004 a0001 a0003 a0004	a0001c0010 a0003c0003 a0003c0005 others(1): Show a0001c0010 a0003c0003 a0003c0005 a0004c0004	a0001c0010t0001 a0003c0003t0007 a0003c0005t0002 others(1): Show a0001c0010t0001 a0003c0003t0007 a0003c0005t0002 a0004c0004t0045	a0001c0010t0001g0064 a0003c0003t0007g0312 a0003c0003t0007g0313 others(7): Show a0001c0010t0001g0064 a0003c0003t0007g0312 a0003c0003t0007g0313 a0003c0005t0002g0052 a0003c0005t0002g0053 a0003c0005t0002g0055 a0003c0005t0002g0059 a0003c0005t0002g0060 a0003c0005t0002g0063 a0004c0004t0045g0314	10	316	0.0317	-31	c.343 others(50): Show c.343-16348_343-16318delTATATATATATATATACTATATATAT ATACT	LATS2	ENSG00000150457.9	transcript	ENST00000382592.5	protein_coding	2/7			chr13	TogoVar
LBP_chr20_38341482_38382013	38342028	TGTGCGTG others(24): Show TGTGCGTGTGCGTACACAGGCACACATTCAGA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02738.hp1 HG02738.hp1	a0021 a0021	a0021c0034 a0021c0034	a0021c0034t0002 a0021c0034t0002	a0021c0034t0002g0143 a0021c0034t0002g0143	1	394	0.0025	-31	c.-44 others(42): Show c.-4488_-4458delGTGCGTGTGCGTACACAGGCACACATTCAGA	LBP	ENSG00000129988.6	transcript	ENST00000217407.3	protein_coding		4453		chr20	TogoVar
LCN15_chr9_136754634_136769518	136765931	CTAGAGGA others(24): Show CTAGAGGATATTGAAACACTAGAAAATTCTGT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04115.hp2 HG04115.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0061 a0001c0001t0001g0061	1	356	0.0028	-31	c.-14 others(42): Show c.-1474_-1444delACAGAATTTTCTAGTGTTTCAATATCCTCTA	LCN15	ENSG00000177984.7	transcript	ENST00000316144.6	protein_coding		1414		chr9	TogoVar
LDHA_chr11_18389563_18413425	18400426	CCACCACA others(24): Show CCACCACACACACACACACACACACACACACA	C C	intron_variant intron_variant	MODIFIER	NA19001.hp2 NA19001.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0001 a0001c0004t0001	a0001c0004t0001g0132 a0001c0004t0001g0132	1	390	0.0026	-31	c.245 others(46): Show c.245-407_245-377delCACACACACACACACACACACACACACACA C	LDHA	ENSG00000134333.15	transcript	ENST00000422447.8	protein_coding	3/7		INFO_REALIGN_3_PRIME	chr11	TogoVar
LEKR1_chr3_156821353_157051129	156911192	TTTTTTTC others(24): Show TTTTTTTCTCAAAAAATTTTCTTTGAGAAATA	T T	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp1 HG00280.hp2 others(63): Show HG00099.hp2 HG00140.hp1 HG00280.hp2 HG00438.hp2 HG00733.hp1 HG00735.hp1 HG00741.hp1 HG01099.hp1 HG01109.hp1 HG01175.hp2 HG01243.hp1 HG01255.hp1 HG01257.hp1 HG01515.hp2 HG01884.hp2 HG02055.hp2 HG02071.hp2 HG02109.hp1 HG02257.hp1 HG02257.hp2 HG02280.hp2 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02572.hp2 HG02622.hp1 HG02622.hp2 HG02717.hp1 HG02735.hp2 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02896.hp2 HG02897.hp2 HG02922.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp2 HG03041.hp2 HG03139.hp1 HG03209.hp1 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp2 HG03491.hp2 HG03516.hp2 HG03927.hp2 HG04199.hp1 HG06807.hp2 NA18906.hp1 NA18906.hp2 NA18952.hp1 NA18991.hp1 NA19030.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp1 NA21309.hp2	a0001 a0002 a0004 others(1): Show a0001 a0002 a0004 a0005	a0001c0002 a0001c0004 a0002c0005 others(2): Show a0001c0002 a0001c0004 a0002c0005 a0004c0007 a0005c0011	a0001c0002t0001 a0001c0004t0001 a0002c0005t0001 others(2): Show a0001c0002t0001 a0001c0004t0001 a0002c0005t0001 a0004c0007t0001 a0005c0011t0001	a0001c0002t0001g0004 a0001c0002t0001g0009 a0001c0002t0001g0010 others(63): Show a0001c0002t0001g0004 a0001c0002t0001g0009 a0001c0002t0001g0010 a0001c0002t0001g0017 a0001c0002t0001g0027 a0001c0002t0001g0034 a0001c0002t0001g0037 a0001c0002t0001g0038 a0001c0002t0001g0046 a0001c0002t0001g0053 a0001c0002t0001g0055 a0001c0002t0001g0057 a0001c0002t0001g0058 a0001c0002t0001g0059 a0001c0002t0001g0060 a0001c0002t0001g0062 a0001c0002t0001g0063 a0001c0002t0001g0064 a0001c0002t0001g0065 a0001c0002t0001g0066 a0001c0002t0001g0067 a0001c0002t0001g0068 a0001c0002t0001g0069 a0001c0002t0001g0073 a0001c0002t0001g0216 a0001c0002t0001g0240 a0001c0004t0001g0005 a0001c0004t0001g0011 a0001c0004t0001g0013 a0001c0004t0001g0014 a0001c0004t0001g0015 a0001c0004t0001g0016 a0001c0004t0001g0018 a0001c0004t0001g0019 a0001c0004t0001g0020 a0001c0004t0001g0021 a0001c0004t0001g0022 a0001c0004t0001g0030 a0001c0004t0001g0032 a0001c0004t0001g0047 a0001c0004t0001g0048 a0001c0004t0001g0050 a0001c0004t0001g0051 a0001c0004t0001g0052 a0001c0004t0001g0054 a0001c0004t0001g0061 a0001c0004t0001g0071 a0001c0004t0001g0072 a0001c0004t0001g0076 a0001c0004t0001g0156 a0001c0004t0001g0157 a0002c0005t0001g0006 a0002c0005t0001g0007 a0002c0005t0001g0008 a0002c0005t0001g0023 a0002c0005t0001g0024 a0002c0005t0001g0025 a0002c0005t0001g0026 a0002c0005t0001g0028 a0002c0005t0001g0029 a0002c0005t0001g0031 a0002c0005t0001g0035 a0002c0005t0001g0036 a0002c0005t0001g0040 a0004c0007t0001g0074 a0005c0011t0001g0049	66	244	0.2705	-31	c.264 others(48): Show c.264-9283_264-9253delCTCAAAAAATTTTCTTTGAGAAATATTT TTT	LEKR1	ENSG00000197980.14	transcript	ENST00000356539.9	protein_coding	3/12		INFO_REALIGN_3_PRIME	chr3	TogoVar
LEXM_chr1_54801063_54847252	54814376	CCGCCCAA others(24): Show CCGCCCAAGGGAGTGGTGCACTCGGCCCTAGT	C C	intron_variant intron_variant	MODIFIER	NA19001.hp1 NA19001.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0003	a0001c0003t0003g0232 a0001c0003t0003g0232	1	382	0.0026	-31	c.924 others(46): Show c.924+402_924+432delCGCCCAAGGGAGTGGTGCACTCGGCCCTAG T	LEXM	ENSG00000162398.12	transcript	ENST00000371273.4	protein_coding	7/9			chr1	TogoVar
LGALS9C_chr17_18471789_18499945	18481666	AAGTATTT others(24): Show AAGTATTTAATGGCAGAGTTCAGACCTGACCT	A A	intron_variant intron_variant	MODIFIER	HG03516.hp2 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0070 a0001c0001t0001g0070	1	291	0.0034	-31	c.40- others(46): Show c.40-2208_40-2178delAGTATTTAATGGCAGAGTTCAGACCTGACC T	LGALS9C	ENSG00000171916.17	transcript	ENST00000328114.11	protein_coding	1/10			chr17	TogoVar
LHFPL3_chr7_104323603_104913561	104430440	ATATATAT others(24): Show ATATATATATATATATTTTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0014 a0001c0001t0006g0014	1	86	0.0116	-31	c.445 others(52): Show c.445+101218_445+101248delATATATATATATATTTTTTTTTTT TTTTTTT	LHFPL3	ENSG00000187416.13	transcript	ENST00000424859.7	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr7	TogoVar
LHPP_chr10_124456823_124619141	124466029	GCGCTTCT others(24): Show GCGCTTCTGAGAATTTGTCCTATCTCGTGTGA	G G	intron_variant intron_variant	MODIFIER	NA19240.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0241 a0001c0001t0001g0241	1	260	0.0039	-31	c.125 others(48): Show c.125+4043_125+4073delCGCTTCTGAGAATTTGTCCTATCTCGTG TGA	LHPP	ENSG00000107902.14	transcript	ENST00000368842.10	protein_coding	1/6			chr10	TogoVar
LINGO2_chr9_27932617_29218601	28062576	CAATCAAA others(24): Show CAATCAAATATATATATTTTGTATATATACAA	C C	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG01071.hp2 HG02027.hp2 others(8): Show HG00408.hp1 HG01071.hp2 HG02027.hp2 HG02056.hp1 HG02109.hp2 HG02451.hp1 HG02451.hp2 HG02895.hp1 HG03130.hp2 HG03209.hp1 NA18995.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(6): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0017 a0001c0001t0018 a0001c0001t0019 a0001c0001t0023 a0001c0001t0027 a0001c0001t0036	a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0029 others(8): Show a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0029 a0001c0001t0003g0032 a0001c0001t0004g0039 a0001c0001t0017g0007 a0001c0001t0018g0015 a0001c0001t0019g0053 a0001c0001t0023g0037 a0001c0001t0027g0030 a0001c0001t0036g0062	11	62	0.1774	-31	c.-35 others(52): Show c.-35-111901_-35-111871delTTGTATATATACAAAATATATATA TTTGATT	LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	6/6			chr9	TogoVar
LINGO2_chr9_27932617_29218601	28769498	ATATATAT others(24): Show ATATATATATATATATATATATTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02602.hp1 HG02602.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0030 a0001c0001t0030	a0001c0001t0030g0026 a0001c0001t0030g0026	1	62	0.0161	-31	c.-39 others(52): Show c.-394-99249_-394-99219delAAAAAAAAAAATATATATATATAT ATATATA	LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	2/6			chr9	TogoVar

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