Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CRYBA4_chr22_26616963_26635669	26627359	CCTTTCTT others(25): Show CCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	C C	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG02647.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0108 a0001c0001t0001g0108	1	402	0.0025	-32	c.301 others(47): Show c.301-892_301-861delCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT TT	CRYBA4	ENSG00000196431.4	transcript	ENST00000354760.4	protein_coding	4/5		INFO_REALIGN_3_PRIME	chr22	TogoVar
CRYBB2_chr22_25214639_25236869	25218111	TAGCCGGG others(25): Show TAGCCGGGCGTGTTGGCGGGCGCCTGTAGTCCC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02015.hp2 HG03453.hp1 HG03471.hp2 others(3): Show HG02015.hp2 HG03453.hp1 HG03471.hp2 HG03927.hp1 NA19010.hp1 NA19054.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0070 a0001c0001t0001g0072 a0001c0001t0001g0074 others(3): Show a0001c0001t0001g0070 a0001c0001t0001g0072 a0001c0001t0001g0074 a0001c0002t0001g0069 a0001c0002t0001g0071 a0001c0002t0001g0073	6	464	0.0129	-32	c.-15 others(43): Show c.-1581_-1550delAGCCGGGCGTGTTGGCGGGCGCCTGTAGTCCC	CRYBB2	ENSG00000244752.3	transcript	ENST00000398215.3	protein_coding		1527		chr22	TogoVar
CRYBB2_chr22_25214639_25236869	25218763	GAGAGAGA others(25): Show GAGAGAGAGAGAGAGAGAAGAAAGAAAGAAAGA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00558.hp2 HG00558.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	464	0.0022	-32	c.-92 others(41): Show c.-929_-898delAGAGAGAGAGAGAGAGAAGAAAGAAAGAAAGA	CRYBB2	ENSG00000244752.3	transcript	ENST00000398215.3	protein_coding		875		chr22	TogoVar
CRYBG1_chr6_106355717_106577017	106358171	TTTTATAT others(25): Show TTTTATATATATATATATATATATATATATATA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01516.hp2 HG02630.hp2 HG02922.hp2 others(3): Show HG01516.hp2 HG02630.hp2 HG02922.hp2 HG03239.hp2 HG03492.hp1 NA19030.hp2	a0006 a0024 a0066 others(2): Show a0006 a0024 a0066 a0067 a0068	a0006c0005 a0024c0027 a0066c0080 others(2): Show a0006c0005 a0024c0027 a0066c0080 a0067c0079 a0068c0078	a0006c0005t0004 a0024c0027t0004 a0066c0080t0001 others(2): Show a0006c0005t0004 a0024c0027t0004 a0066c0080t0001 a0067c0079t0002 a0068c0078t0002	a0006c0005t0004g0235 a0024c0027t0004g0008 a0024c0027t0004g0078 others(3): Show a0006c0005t0004g0235 a0024c0027t0004g0008 a0024c0027t0004g0078 a0066c0080t0001g0009 a0067c0079t0002g0006 a0068c0078t0002g0007	6	272	0.0221	-32	c.-27 others(43): Show c.-2737_-2706delTTTATATATATATATATATATATATATATATA	CRYBG1	ENSG00000112297.18	transcript	ENST00000633556.3	protein_coding		2545		chr6	TogoVar
CRYBG1_chr6_106355717_106577017	106433727	ATATATAT others(25): Show ATATATATACATATATATGTATATATATATGTG	A A	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG01255.hp1 HG03486.hp2 others(2): Show HG00741.hp2 HG01255.hp1 HG03486.hp2 NA18986.hp1 homoSapiens_chm13v2.hp1	a0001 a0004 a0005 others(2): Show a0001 a0004 a0005 a0006 a0042	a0001c0001 a0004c0004 a0005c0008 others(2): Show a0001c0001 a0004c0004 a0005c0008 a0006c0005 a0042c0055	a0001c0001t0001 a0004c0004t0002 a0005c0008t0003 others(2): Show a0001c0001t0001 a0004c0004t0002 a0005c0008t0003 a0006c0005t0001 a0042c0055t0001	a0001c0001t0001g0041 a0004c0004t0002g0107 a0005c0008t0003g0201 others(2): Show a0001c0001t0001g0041 a0004c0004t0002g0107 a0005c0008t0003g0201 a0006c0005t0001g0064 a0042c0055t0001g0050	5	272	0.0184	-32	c.174 others(51): Show c.174-17958_174-17927delCATATATATGTATATATATATGTGTA TATATA	CRYBG1	ENSG00000112297.18	transcript	ENST00000633556.3	protein_coding	1/21		INFO_REALIGN_3_PRIME	chr6	TogoVar
CSF2RA_chrX_1263814_1314935	1267155	GTGCAGGT others(25): Show GTGCAGGTCTGTGTGTGCAGACATGCATGTGTA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02683.hp2 HG02683.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0147 a0002c0003t0001g0147	1	159	0.0063	-32	c.-18 others(43): Show c.-1814_-1783delTGCAGGTCTGTGTGTGCAGACATGCATGTGTA	CSF2RA	ENSG00000198223.18	transcript	ENST00000381529.9	protein_coding		1658		chrX	TogoVar
CSF2RA_chrX_1263814_1314935	1283107	GTTCCTTC others(25): Show GTTCCTTCGTTCCTTCGTTCCTTCCTTCCTTCC	G G	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00423.hp2 HG01358.hp1 others(16): Show HG00423.hp1 HG00423.hp2 HG01358.hp1 HG01433.hp1 HG02148.hp1 HG02155.hp2 HG02922.hp2 NA18522.hp2 NA18906.hp1 NA18954.hp1 NA18954.hp2 NA18980.hp2 NA18984.hp2 NA19012.hp2 NA19064.hp1 NA19064.hp2 NA19080.hp1 NA20300.hp1 NA20905.hp2	a0001 a0007 a0001 a0007	a0001c0001 a0001c0002 a0001c0007 others(2): Show a0001c0001 a0001c0002 a0001c0007 a0001c0014 a0007c0017	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(7): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0002t0001 a0001c0002t0003 a0001c0002t0009 a0001c0007t0001 a0001c0014t0005 a0007c0017t0001	a0001c0001t0001g0017 a0001c0001t0001g0047 a0001c0001t0001g0076 others(16): Show a0001c0001t0001g0017 a0001c0001t0001g0047 a0001c0001t0001g0076 a0001c0001t0001g0092 a0001c0001t0002g0034 a0001c0001t0002g0051 a0001c0001t0002g0071 a0001c0001t0002g0102 a0001c0001t0002g0105 a0001c0001t0003g0001 a0001c0001t0003g0093 a0001c0001t0003g0148 a0001c0001t0004g0049 a0001c0002t0001g0052 a0001c0002t0003g0059 a0001c0002t0009g0011 a0001c0007t0001g0106 a0001c0014t0005g0150 a0007c0017t0001g0143	19	159	0.1195	-32	c.76+ others(45): Show c.76+336_76+367delGTTCCTTCGTTCCTTCCTTCCTTCCTTCCTTC	CSF2RA	ENSG00000198223.18	transcript	ENST00000381529.9	protein_coding	3/12		INFO_REALIGN_3_PRIME	chrX	TogoVar
CSGALNACT1_chr8_19399161_19762277	19666781	AAGAAAGA others(25): Show AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAG	A A	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02451.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0037 a0002c0003t0037	a0002c0003t0037g0233 a0002c0003t0037g0233	1	238	0.0042	-32	c.-39 others(53): Show c.-391-64948_-391-64917delCTCTTTCTTTCTTTCTTTCTTTCT TTCTTTCT	CSGALNACT1	ENSG00000147408.16	transcript	ENST00000692225.2	protein_coding	1/8			chr8	TogoVar
CSGALNACT1_chr8_19399161_19762277	19666785	AAGAAAGA others(25): Show AAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGAG	A A	intron_variant intron_variant	MODIFIER	HG02698.hp1 HG03669.hp2 HG02698.hp1 HG03669.hp2	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0013 a0002c0004t0013	a0002c0004t0013g0057 a0002c0004t0013g0199 a0002c0004t0013g0057 a0002c0004t0013g0199	2	238	0.0084	-32	c.-39 others(53): Show c.-391-64952_-391-64921delCTCTCTCTTTCTTTCTTTCTTTCT TTCTTTCT	CSGALNACT1	ENSG00000147408.16	transcript	ENST00000692225.2	protein_coding	1/8			chr8	TogoVar
CSGALNACT1_chr8_19399161_19762277	19666789	AAGAAAGA others(25): Show AAGAAAGAAAGAAAGAAAGAAAGAGAGAGAGAG	A A	intron_variant intron_variant	MODIFIER	NA20300.hp1 NA20300.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0080 a0001c0002t0005g0080	1	238	0.0042	-32	c.-39 others(53): Show c.-391-64956_-391-64925delCTCTCTCTCTCTTTCTTTCTTTCT TTCTTTCT	CSGALNACT1	ENSG00000147408.16	transcript	ENST00000692225.2	protein_coding	1/8			chr8	TogoVar
CSGALNACT1_chr8_19399161_19762277	19666933	GAGAGAGA others(25): Show GAGAGAGAGAAAAAGAAAGAAAGAAAGAAAGAA	G G	intron_variant intron_variant	MODIFIER	HG02698.hp2 HG04115.hp1 HG04204.hp2 HG02698.hp2 HG04115.hp1 HG04204.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0002 a0001c0001t0001 a0001c0002t0002	a0001c0001t0001g0083 a0001c0002t0002g0132 a0001c0002t0002g0236 a0001c0001t0001g0083 a0001c0002t0002g0132 a0001c0002t0002g0236	3	238	0.0126	-32	c.-39 others(53): Show c.-391-65100_-391-65069delTTCTTTCTTTCTTTCTTTCTTTTT CTCTCTCT	CSGALNACT1	ENSG00000147408.16	transcript	ENST00000692225.2	protein_coding	1/8			chr8	TogoVar
CSGALNACT1_chr8_19399161_19762277	19666943	AAAAGAAA others(25): Show AAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	A A	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01099.hp1	a0005 a0005	a0005c0011 a0005c0011	a0005c0011t0003 a0005c0011t0003	a0005c0011t0003g0180 a0005c0011t0003g0180	1	238	0.0042	-32	c.-39 others(53): Show c.-391-65110_-391-65079delCTTTCTTTCTTTCTTTCTTTCTTT CTTTCTTT	CSGALNACT1	ENSG00000147408.16	transcript	ENST00000692225.2	protein_coding	1/8			chr8	TogoVar
CSGALNACT1_chr8_19399161_19762277	19667008	AAAGAAAG others(25): Show AAAGAAAGAAAGGAAGGAAGGAAGGAAGGAAGG	A A	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG00738.hp1	a0005 a0005	a0005c0011 a0005c0011	a0005c0011t0003 a0005c0011t0003	a0005c0011t0003g0181 a0005c0011t0003g0181	1	238	0.0042	-32	c.-39 others(53): Show c.-391-65175_-391-65144delCCTTCCTTCCTTCCTTCCTTCCTT TCTTTCTT	CSGALNACT1	ENSG00000147408.16	transcript	ENST00000692225.2	protein_coding	1/8			chr8	TogoVar
CSGALNACT1_chr8_19399161_19762277	19748411	TTTAAAAA others(25): Show TTTAAAAAACTAAGAATAGAAATAGGAGATATA	T T	intron_variant intron_variant	MODIFIER	HG01496.hp1 HG01496.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0026 a0002c0003t0026	a0002c0003t0026g0002 a0002c0003t0026g0002	1	238	0.0042	-32	c.-39 others(51): Show c.-392+8743_-392+8774delTATATCTCCTATTTCTATTCTTAGTT TTTTAA	CSGALNACT1	ENSG00000147408.16	transcript	ENST00000692225.2	protein_coding	1/8			chr8	TogoVar
CSH2_chr17_63867016_63878677	63875552	TTTTCTTT others(25): Show TTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00558.hp1 HG00609.hp2 HG02074.hp2 others(4): Show HG00558.hp1 HG00609.hp2 HG02074.hp2 HG02080.hp2 HG02622.hp2 HG02630.hp2 HG03540.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0002c0006 a0001c0001 a0002c0002 a0002c0006	a0001c0001t0001 a0001c0001t0002 a0002c0002t0002 others(1): Show a0001c0001t0001 a0001c0001t0002 a0002c0002t0002 a0002c0006t0002	a0001c0001t0001g0001 a0001c0001t0002g0002 a0002c0002t0002g0003 others(1): Show a0001c0001t0001g0001 a0001c0001t0002g0002 a0002c0002t0002g0003 a0002c0006t0002g0023	7	410	0.0171	-32	c.-19 others(43): Show c.-1970_-1939delGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	CSH2	ENSG00000213218.11	transcript	ENST00000392886.7	protein_coding		1876		chr17	TogoVar
CSH2_chr17_63867016_63878677	63875581	TTTCTTTC others(25): Show TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01255.hp1 HG01255.hp2 HG02074.hp1 others(11): Show HG01255.hp1 HG01255.hp2 HG02074.hp1 HG02135.hp2 HG02451.hp2 HG02683.hp1 HG02976.hp2 HG03710.hp2 NA18954.hp2 NA18956.hp1 NA18968.hp2 NA19005.hp1 NA19012.hp1 NA19066.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0002 a0001c0001t0002g0006 a0001c0001t0002g0002 a0001c0001t0002g0006	14	410	0.0342	-32	c.-19 others(43): Show c.-1999_-1968delGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA	CSH2	ENSG00000213218.11	transcript	ENST00000392886.7	protein_coding		1905		chr17	TogoVar
CSMD1_chr8_2930361_4999914	3237762	ATATAATT others(25): Show ATATAATTTTTATAATTATACTTATACTACAAG	A A	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02129.hp2 HG02257.hp1 others(9): Show HG02055.hp2 HG02129.hp2 HG02257.hp1 HG02615.hp1 HG02622.hp2 HG02922.hp2 HG03130.hp1 HG03516.hp1 NA18906.hp2 NA18971.hp2 NA19030.hp1 NA20129.hp1	a0001 a0003 a0007 others(6): Show a0001 a0003 a0007 a0008 a0010 a0014 a0023 a0026 a0031	a0001c0007 a0001c0019 a0001c0026 others(9): Show a0001c0007 a0001c0019 a0001c0026 a0003c0014 a0003c0057 a0007c0088 a0008c0067 a0010c0112 a0014c0010 a0023c0095 a0026c0082 a0031c0069	a0001c0007t0032 a0001c0019t0078 a0001c0026t0006 others(9): Show a0001c0007t0032 a0001c0019t0078 a0001c0026t0006 a0003c0014t0055 a0003c0057t0080 a0007c0088t0076 a0008c0067t0059 a0010c0112t0081 a0014c0010t0070 a0023c0095t0002 a0026c0082t0052 a0031c0069t0043	a0001c0007t0032g0033 a0001c0019t0078g0105 a0001c0026t0006g0093 others(9): Show a0001c0007t0032g0033 a0001c0019t0078g0105 a0001c0026t0006g0093 a0003c0014t0055g0056 a0003c0057t0080g0075 a0007c0088t0076g0057 a0008c0067t0059g0079 a0010c0112t0081g0090 a0014c0010t0070g0084 a0023c0095t0002g0124 a0026c0082t0052g0097 a0031c0069t0043g0100	12	126	0.0952	-32	c.415 others(51): Show c.4154-7563_4154-7532delCTTGTAGTATAAGTATAATTATAAAA ATTATA	CSMD1	ENSG00000183117.20	transcript	ENST00000635120.2	protein_coding	26/69			chr8	TogoVar
CSMD1_chr8_2930361_4999914	3303919	AATAATAA others(25): Show AATAATAACTATTTTGGGGTATTGCGCCCCATT	A A	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00423.hp1 HG00438.hp2 others(34): Show HG00099.hp2 HG00423.hp1 HG00438.hp2 HG00735.hp2 HG01123.hp2 HG01261.hp1 HG01884.hp2 HG01934.hp1 HG02056.hp1 HG02257.hp2 HG02559.hp1 HG02615.hp1 HG02615.hp2 HG02647.hp2 HG02683.hp2 HG02723.hp1 HG02723.hp2 HG02886.hp1 HG02965.hp2 HG03139.hp2 HG03209.hp1 HG03225.hp2 HG03516.hp2 HG03669.hp1 HG03710.hp1 HG03710.hp2 HG03834.hp1 HG04204.hp2 HG04228.hp2 NA18522.hp1 NA18979.hp1 NA18979.hp2 NA18982.hp1 NA18983.hp2 NA18984.hp2 NA18995.hp1 NA19074.hp1	a0001 a0002 a0004 others(8): Show a0001 a0002 a0004 a0005 a0017 a0022 a0024 a0025 a0026 a0027 a0038	a0001c0001 a0001c0002 a0001c0003 others(30): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0020 a0001c0025 a0001c0033 a0001c0039 a0001c0073 a0001c0080 a0001c0081 a0001c0105 a0001c0108 a0001c0109 a0002c0012 a0002c0022 a0002c0036 a0002c0037 a0002c0075 a0002c0076 a0002c0084 a0004c0086 a0004c0087 a0005c0065 a0017c0106 a0022c0013 a0024c0038 a0025c0096 a0026c0082 a0027c0023 a0038c0066	a0001c0001t0002 a0001c0002t0002 a0001c0003t0008 others(34): Show a0001c0001t0002 a0001c0002t0002 a0001c0003t0008 a0001c0003t0013 a0001c0003t0019 a0001c0004t0020 a0001c0004t0063 a0001c0005t0007 a0001c0006t0002 a0001c0006t0060 a0001c0020t0016 a0001c0025t0003 a0001c0033t0003 a0001c0039t0066 a0001c0073t0007 a0001c0080t0040 a0001c0081t0037 a0001c0105t0001 a0001c0108t0054 a0001c0109t0038 a0002c0012t0017 a0002c0022t0036 a0002c0036t0029 a0002c0037t0009 a0002c0075t0026 a0002c0076t0035 a0002c0084t0018 a0004c0086t0002 a0004c0087t0001 a0005c0065t0023 a0017c0106t0012 a0022c0013t0007 a0024c0038t0075 a0025c0096t0067 a0026c0082t0052 a0027c0023t0001 a0038c0066t0010	a0001c0001t0002g0102 a0001c0002t0002g0083 a0001c0003t0008g0053 others(34): Show a0001c0001t0002g0102 a0001c0002t0002g0083 a0001c0003t0008g0053 a0001c0003t0013g0026 a0001c0003t0019g0107 a0001c0004t0020g0086 a0001c0004t0063g0095 a0001c0005t0007g0070 a0001c0006t0002g0109 a0001c0006t0060g0103 a0001c0020t0016g0065 a0001c0025t0003g0077 a0001c0033t0003g0059 a0001c0039t0066g0080 a0001c0073t0007g0108 a0001c0080t0040g0025 a0001c0081t0037g0030 a0001c0105t0001g0029 a0001c0108t0054g0074 a0001c0109t0038g0013 a0002c0012t0017g0088 a0002c0022t0036g0048 a0002c0036t0029g0009 a0002c0037t0009g0046 a0002c0075t0026g0051 a0002c0076t0035g0014 a0002c0084t0018g0087 a0004c0086t0002g0118 a0004c0087t0001g0022 a0005c0065t0023g0050 a0017c0106t0012g0042 a0022c0013t0007g0112 a0024c0038t0075g0067 a0025c0096t0067g0116 a0026c0082t0052g0097 a0027c0023t0001g0052 a0038c0066t0010g0032	37	126	0.2937	-32	c.395 others(51): Show c.3950+3744_3950+3775delAATGGGGCGCAATACCCCAAAATAGT TATTAT	CSMD1	ENSG00000183117.20	transcript	ENST00000635120.2	protein_coding	25/69			chr8	TogoVar
CSMD1_chr8_2930361_4999914	3660480	CTTTTTTT others(25): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02559.hp1 HG03130.hp1 others(3): Show HG02451.hp2 HG02559.hp1 HG03130.hp1 HG03195.hp2 HG03209.hp1 NA18906.hp1	a0001 a0002 a0013 others(1): Show a0001 a0002 a0013 a0029	a0001c0004 a0001c0020 a0001c0026 others(3): Show a0001c0004 a0001c0020 a0001c0026 a0002c0032 a0013c0027 a0029c0028	a0001c0004t0020 a0001c0020t0016 a0001c0026t0006 others(3): Show a0001c0004t0020 a0001c0020t0016 a0001c0026t0006 a0002c0032t0050 a0013c0027t0003 a0029c0028t0024	a0001c0004t0020g0086 a0001c0020t0016g0065 a0001c0026t0006g0093 others(3): Show a0001c0004t0020g0086 a0001c0020t0016g0065 a0001c0026t0006g0093 a0002c0032t0050g0061 a0013c0027t0003g0099 a0029c0028t0024g0040	6	126	0.0476	-32	c.101 others(53): Show c.1010-43715_1010-43684delAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAA	CSMD1	ENSG00000183117.20	transcript	ENST00000635120.2	protein_coding	7/69			chr8	TogoVar
CSMD1_chr8_2930361_4999914	3671481	ACTCATAT others(25): Show ACTCATATATATGATCATATATATATATATATG	A A	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG01074.hp2 HG01255.hp2 others(7): Show HG00438.hp1 HG01074.hp2 HG01255.hp2 HG02056.hp1 HG02074.hp1 HG03834.hp1 NA18971.hp1 NA18982.hp1 NA19090.hp1 NA20129.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0002 a0001c0049 a0001c0079 others(7): Show a0001c0002 a0001c0049 a0001c0079 a0001c0094 a0001c0102 a0001c0111 a0002c0077 a0004c0056 a0004c0086 a0004c0087	a0001c0002t0002 a0001c0049t0002 a0001c0079t0072 others(7): Show a0001c0002t0002 a0001c0049t0002 a0001c0079t0072 a0001c0094t0002 a0001c0102t0005 a0001c0111t0045 a0002c0077t0001 a0004c0056t0062 a0004c0086t0002 a0004c0087t0001	a0001c0002t0002g0083 a0001c0049t0002g0071 a0001c0079t0072g0113 others(7): Show a0001c0002t0002g0083 a0001c0049t0002g0071 a0001c0079t0072g0113 a0001c0094t0002g0110 a0001c0102t0005g0034 a0001c0111t0045g0063 a0002c0077t0001g0016 a0004c0056t0062g0072 a0004c0086t0002g0118 a0004c0087t0001g0022	10	126	0.0794	-32	c.100 others(53): Show c.1009+36901_1009+36932delCATATATATATATATATGATCATA TATATGAG	CSMD1	ENSG00000183117.20	transcript	ENST00000635120.2	protein_coding	7/69			chr8	TogoVar
CSMD1_chr8_2930361_4999914	3772466	TACACATA others(25): Show TACACATATATATACATATATACACATATATAC	T T	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG01081.hp1 HG01261.hp2 others(11): Show HG00735.hp2 HG01081.hp1 HG01261.hp2 HG01934.hp1 HG02056.hp2 HG02129.hp1 HG02723.hp2 HG03710.hp2 HG03834.hp1 HG04204.hp1 HG04204.hp2 NA18983.hp2 NA19074.hp1 NA20129.hp2	a0001 a0002 a0004 others(5): Show a0001 a0002 a0004 a0005 a0016 a0019 a0022 a0034	a0001c0001 a0001c0003 a0001c0071 others(11): Show a0001c0001 a0001c0003 a0001c0071 a0001c0073 a0001c0103 a0001c0105 a0001c0111 a0002c0076 a0004c0087 a0005c0065 a0016c0063 a0019c0018 a0022c0013 a0034c0055	a0001c0001t0002 a0001c0003t0019 a0001c0071t0069 others(11): Show a0001c0001t0002 a0001c0003t0019 a0001c0071t0069 a0001c0073t0007 a0001c0103t0033 a0001c0105t0001 a0001c0111t0045 a0002c0076t0035 a0004c0087t0001 a0005c0065t0023 a0016c0063t0010 a0019c0018t0058 a0022c0013t0007 a0034c0055t0034	a0001c0001t0002g0102 a0001c0003t0019g0107 a0001c0071t0069g0115 others(11): Show a0001c0001t0002g0102 a0001c0003t0019g0107 a0001c0071t0069g0115 a0001c0073t0007g0108 a0001c0103t0033g0028 a0001c0105t0001g0029 a0001c0111t0045g0063 a0002c0076t0035g0014 a0004c0087t0001g0022 a0005c0065t0023g0050 a0016c0063t0010g0045 a0019c0018t0058g0068 a0022c0013t0007g0112 a0034c0055t0034g0047	14	126	0.1111	-32	c.819 others(51): Show c.819-18456_819-18425delGTATATATGTGTATATATGTATATAT ATGTGT	CSMD1	ENSG00000183117.20	transcript	ENST00000635120.2	protein_coding	5/69			chr8	TogoVar
CSMD1_chr8_2930361_4999914	3772611	TTATATAC others(25): Show TTATATACATATATACACATATATTTATATACA	T T	intron_variant intron_variant	MODIFIER	NA18522.hp1 NA18522.hp1	a0027 a0027	a0027c0023 a0027c0023	a0027c0023t0001 a0027c0023t0001	a0027c0023t0001g0052 a0027c0023t0001g0052	1	126	0.0079	-32	c.819 others(51): Show c.819-18601_819-18570delTGTATATAAATATATGTGTATATATG TATATA	CSMD1	ENSG00000183117.20	transcript	ENST00000635120.2	protein_coding	5/69			chr8	TogoVar
CSMD1_chr8_2930361_4999914	3998959	GTAGTTTA others(25): Show GTAGTTTATATATAAATAACATAAACTATATGA	G G	intron_variant intron_variant	MODIFIER	HG02074.hp1 NA19074.hp2 HG02074.hp1 NA19074.hp2	a0001 a0001	a0001c0079 a0001c0090 a0001c0079 a0001c0090	a0001c0079t0072 a0001c0090t0001 a0001c0079t0072 a0001c0090t0001	a0001c0079t0072g0113 a0001c0090t0001g0027 a0001c0079t0072g0113 a0001c0090t0001g0027	2	126	0.0159	-32	c.611 others(47): Show c.611-881_611-850delTCATATAGTTTATGTTATTTATATATAAAC TA	CSMD1	ENSG00000183117.20	transcript	ENST00000635120.2	protein_coding	4/69			chr8	TogoVar
CSMD1_chr8_2930361_4999914	4078911	ATATATAT others(25): Show ATATATATATATATATATATATATATATATATG	A A	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02258.hp1	a0001 a0001	a0001c0114 a0001c0114	a0001c0114t0003 a0001c0114t0003	a0001c0114t0003g0119 a0001c0114t0003g0119	1	126	0.0079	-32	c.416 others(51): Show c.416-46844_416-46813delCATATATATATATATATATATATATA TATATA	CSMD1	ENSG00000183117.20	transcript	ENST00000635120.2	protein_coding	3/69			chr8	TogoVar
CSMD1_chr8_2930361_4999914	4332552	TACACACA others(25): Show TACACACACACACACACACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG02559.hp2 NA19240.hp1 HG02559.hp2 NA19240.hp1	a0001 a0001	a0001c0043 a0001c0085 a0001c0043 a0001c0085	a0001c0043t0031 a0001c0085t0020 a0001c0043t0031 a0001c0085t0020	a0001c0043t0031g0044 a0001c0085t0020g0060 a0001c0043t0031g0044 a0001c0085t0020g0060	2	126	0.0159	-32	c.415 others(51): Show c.415+87369_415+87400delGTGTGTGTGTGTGTGTGTGTGTGTGT GTGTGT	CSMD1	ENSG00000183117.20	transcript	ENST00000635120.2	protein_coding	3/69			chr8	TogoVar
CSMD1_chr8_2930361_4999914	4486130	TATATATA others(25): Show TATATATACATACATATATATATATATACATAC	T T	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02451.hp1	a0002 a0002	a0002c0051 a0002c0051	a0002c0051t0006 a0002c0051t0006	a0002c0051t0006g0081 a0002c0051t0006g0081	1	126	0.0079	-32	c.303 others(51): Show c.303-66097_303-66066delGTATGTATATATATATATATGTATGT ATATAT	CSMD1	ENSG00000183117.20	transcript	ENST00000635120.2	protein_coding	2/69			chr8	TogoVar
CSMD1_chr8_2930361_4999914	4647411	CGCGTGTG others(25): Show CGCGTGTGCCACGGCGGCCTGCTACGTAGGTAT	C C	intron_variant intron_variant	MODIFIER	HG01074.hp1 HG02886.hp1 HG03098.hp1 others(1): Show HG01074.hp1 HG02886.hp1 HG03098.hp1 NA19030.hp2	a0001 a0012 a0032 a0001 a0012 a0032	a0001c0002 a0001c0039 a0012c0104 others(1): Show a0001c0002 a0001c0039 a0012c0104 a0032c0011	a0001c0002t0028 a0001c0039t0066 a0012c0104t0071 others(1): Show a0001c0002t0028 a0001c0039t0066 a0012c0104t0071 a0032c0011t0065	a0001c0002t0028g0005 a0001c0039t0066g0080 a0012c0104t0071g0058 others(1): Show a0001c0002t0028g0005 a0001c0039t0066g0080 a0012c0104t0071g0058 a0032c0011t0065g0101	4	126	0.0318	-32	c.86- others(47): Show c.86-9885_86-9854delATACCTACGTAGCAGGCCGCCGTGGCACAC GC	CSMD1	ENSG00000183117.20	transcript	ENST00000635120.2	protein_coding	1/69			chr8	TogoVar
CSMD1_chr8_2930361_4999914	4647464	CTACGTAG others(25): Show CTACGTAGGTACGCGTGTGCCATGGTGGTTTGT	C C	intron_variant intron_variant	MODIFIER	HG03098.hp2 HG03098.hp2	a0011 a0011	a0011c0110 a0011c0110	a0011c0110t0074 a0011c0110t0074	a0011c0110t0074g0082 a0011c0110t0074g0082	1	126	0.0079	-32	c.86- others(47): Show c.86-9938_86-9907delACAAACCACCATGGCACACGCGTACCTACG TA	CSMD1	ENSG00000183117.20	transcript	ENST00000635120.2	protein_coding	1/69			chr8	TogoVar
CSMD1_chr8_2930361_4999914	4761880	TATCTATC others(25): Show TATCTATCTACCTACCTATCTATCTATCTATCA	T T	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG03225.hp1 HG01243.hp1 HG03225.hp1	a0001 a0005 a0001 a0005	a0001c0017 a0005c0064 a0001c0017 a0005c0064	a0001c0017t0005 a0005c0064t0051 a0001c0017t0005 a0005c0064t0051	a0001c0017t0005g0003 a0005c0064t0051g0078 a0001c0017t0005g0003 a0005c0064t0051g0078	2	126	0.0159	-32	c.86- others(51): Show c.86-124354_86-124323delTGATAGATAGATAGATAGGTAGGTAG ATAGAT	CSMD1	ENSG00000183117.20	transcript	ENST00000635120.2	protein_coding	1/69			chr8	TogoVar
CSMD1_chr8_2930361_4999914	4761894	CCTATCTA others(25): Show CCTATCTATCTATCTATCAATCTATCTATCTAT	C C	intron_variant intron_variant	MODIFIER	HG02074.hp2 HG02074.hp2	a0002 a0002	a0002c0091 a0002c0091	a0002c0091t0002 a0002c0091t0002	a0002c0091t0002g0114 a0002c0091t0002g0114	1	126	0.0079	-32	c.86- others(51): Show c.86-124368_86-124337delATAGATAGATAGATTGATAGATAGAT AGATAG	CSMD1	ENSG00000183117.20	transcript	ENST00000635120.2	protein_coding	1/69			chr8	TogoVar
CSMD1_chr8_2930361_4999914	4920902	AAAAGAAA others(25): Show AAAAGAAAAGAAAAGAAAAGAAAAGAAAGAGAG	A A	intron_variant intron_variant	MODIFIER	HG02922.hp2 HG03139.hp1 NA18522.hp1 HG02922.hp2 HG03139.hp1 NA18522.hp1	a0002 a0027 a0031 a0002 a0027 a0031	a0002c0074 a0027c0023 a0031c0069 a0002c0074 a0027c0023 a0031c0069	a0002c0074t0041 a0027c0023t0001 a0031c0069t0043 a0002c0074t0041 a0027c0023t0001 a0031c0069t0043	a0002c0074t0041g0031 a0027c0023t0001g0052 a0031c0069t0043g0100 a0002c0074t0041g0031 a0027c0023t0001g0052 a0031c0069t0043g0100	3	126	0.0238	-32	c.85+ others(49): Show c.85+73398_85+73429delCTCTCTTTCTTTTCTTTTCTTTTCTTTT CTTT	CSMD1	ENSG00000183117.20	transcript	ENST00000635120.2	protein_coding	1/69			chr8	TogoVar
CSMD2_chr1_33508998_34170230	33989013	CATATATA others(25): Show CATATATATATATATATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG03471.hp2 HG02717.hp2 HG03471.hp2	a0002 a0014 a0002 a0014	a0002c0027 a0014c0036 a0002c0027 a0014c0036	a0002c0027t0003 a0014c0036t0002 a0002c0027t0003 a0014c0036t0002	a0002c0027t0003g0045 a0014c0036t0002g0044 a0002c0027t0003g0045 a0014c0036t0002g0044	2	66	0.0303	-32	c.517 others(51): Show c.517+43549_517+43580delATATATATATATATATATATATATAT ATATAT	CSMD2	ENSG00000121904.19	transcript	ENST00000373381.9	protein_coding	3/70			chr1	TogoVar
CSMD3_chr8_112217928_113441939	112807488	ATAGGTAG others(25): Show ATAGGTAGGTAGGTAGGTAGGTAGGTAGGTAGG	A A	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG02922.hp1 HG03041.hp2 others(2): Show HG02717.hp1 HG02922.hp1 HG03041.hp2 HG03225.hp1 NA20300.hp2	a0001 a0002 a0005 others(1): Show a0001 a0002 a0005 a0008	a0001c0023 a0002c0010 a0005c0012 others(2): Show a0001c0023 a0002c0010 a0005c0012 a0005c0013 a0008c0014	a0001c0023t0001 a0002c0010t0002 a0005c0012t0001 others(2): Show a0001c0023t0001 a0002c0010t0002 a0005c0012t0001 a0005c0013t0001 a0008c0014t0005	a0001c0023t0001g0056 a0002c0010t0002g0070 a0005c0012t0001g0038 others(2): Show a0001c0023t0001g0056 a0002c0010t0002g0070 a0005c0012t0001g0038 a0005c0013t0001g0039 a0008c0014t0005g0040	5	80	0.0625	-32	c.186 others(51): Show c.1860-7246_1860-7215delCCTACCTACCTACCTACCTACCTACC TACCTA	CSMD3	ENSG00000164796.18	transcript	ENST00000297405.10	protein_coding	12/70			chr8	TogoVar
CSMD3_chr8_112217928_113441939	113112386	CATATATA others(25): Show CATATATATATATATATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG01109.hp2 HG01261.hp2 others(3): Show HG01081.hp1 HG01109.hp2 HG01261.hp2 HG02055.hp2 HG02257.hp1 HG02976.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0002c0003 a0002c0027 others(2): Show a0001c0001 a0002c0003 a0002c0027 a0002c0032 a0004c0004	a0001c0001t0007 a0002c0003t0006 a0002c0027t0003 others(3): Show a0001c0001t0007 a0002c0003t0006 a0002c0027t0003 a0002c0032t0001 a0004c0004t0001 a0004c0004t0009	a0001c0001t0007g0041 a0002c0003t0006g0009 a0002c0027t0003g0047 others(3): Show a0001c0001t0007g0041 a0002c0003t0006g0009 a0002c0027t0003g0047 a0002c0032t0001g0079 a0004c0004t0001g0031 a0004c0004t0009g0032	6	80	0.0750	-32	c.710 others(51): Show c.710-13455_710-13424delATATATATATATATATATATATATAT ATATAT	CSMD3	ENSG00000164796.18	transcript	ENST00000297405.10	protein_coding	4/70			chr8	TogoVar
CSNK1A1_chr5_149487982_149556439	149542608	ATATATAT others(25): Show ATATATATATATATATATATATATATATATATG	A A	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01071.hp2 HG01074.hp1 HG01070.hp1 HG01071.hp2 HG01074.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0014 a0001c0001t0004 a0001c0001t0014	a0001c0001t0004g0310 a0001c0001t0004g0311 a0001c0001t0014g0172 a0001c0001t0004g0310 a0001c0001t0004g0311 a0001c0001t0014g0172	3	390	0.0077	-32	c.230 others(49): Show c.230+7435_230+7466delCATATATATATATATATATATATATATA TATA	CSNK1A1	ENSG00000113712.19	transcript	ENST00000377843.8	protein_coding	2/9			chr5	TogoVar
CSNK1D_chr17_82237667_82278700	82253986	GAGCTGAG others(25): Show GAGCTGAGCCGCCGGAGCCTCGAGAAGCCAGTC	G G	intron_variant intron_variant	MODIFIER	HG03130.hp1 NA19054.hp2 HG03130.hp1 NA19054.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0006 a0001c0001t0001 a0001c0001t0006	a0001c0001t0001g0100 a0001c0001t0006g0217 a0001c0001t0001g0100 a0001c0001t0006g0217	2	320	0.0063	-32	c.337 others(47): Show c.337-774_337-743delGACTGGCTTCTCGAGGCTCCGGCGGCTCAG CT	CSNK1D	ENSG00000141551.15	transcript	ENST00000314028.11	protein_coding	3/8			chr17	TogoVar
CSNK1D_chr17_82237667_82278700	82254040	AGAAGCCA others(25): Show AGAAGCCAGTCAGCTGAGCCGCCGGAGCCTCGT	A A	intron_variant intron_variant	MODIFIER	HG02015.hp2 HG02015.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0014	a0001c0001t0014g0139 a0001c0001t0014g0139	1	320	0.0031	-32	c.337 others(47): Show c.337-828_337-797delACGAGGCTCCGGCGGCTCAGCTGACTGGCT TC	CSNK1D	ENSG00000141551.15	transcript	ENST00000314028.11	protein_coding	3/8			chr17	TogoVar
CSNK1D_chr17_82237667_82278700	82254125	TCGGAGCC others(25): Show TCGGAGCCTCGAGAAGCCAGTGAGCTGAGCCGC	T T	intron_variant intron_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0026 a0001c0001t0026	a0001c0001t0026g0202 a0001c0001t0026g0202	1	320	0.0031	-32	c.337 others(47): Show c.337-913_337-882delGCGGCTCAGCTCACTGGCTTCTCGAGGCTC CG	CSNK1D	ENSG00000141551.15	transcript	ENST00000314028.11	protein_coding	3/8			chr17	TogoVar
CSNK1D_chr17_82237667_82278700	82254565	CGCCAGTG others(25): Show CGCCAGTGAGCTGAGCCGCCGGAGCCTCGAGAA	C C	intron_variant intron_variant	MODIFIER	NA19240.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0144 a0001c0001t0001g0144	1	320	0.0031	-32	c.336 others(47): Show c.336+832_336+863delTTCTCGAGGCTCCGGCGGCTCAGCTCACTG GC	CSNK1D	ENSG00000141551.15	transcript	ENST00000314028.11	protein_coding	3/8			chr17	TogoVar
CSNK1D_chr17_82237667_82278700	82254916	GAAGCCAG others(25): Show GAAGCCAGTGAGCTGAGCCATCGGAGCCTCGAC	G G	intron_variant intron_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0026 a0001c0001t0026	a0001c0001t0026g0202 a0001c0001t0026g0202	1	320	0.0031	-32	c.336 others(47): Show c.336+481_336+512delGTCGAGGCTCCGATGGCTCAGCTCACTGGC TT	CSNK1D	ENSG00000141551.15	transcript	ENST00000314028.11	protein_coding	3/8			chr17	TogoVar
CSNK1D_chr17_82237667_82278700	82260048	ATGGTGTA others(25): Show ATGGTGTACTGACTGATGTGACTGATGGTGTAC	A A	intron_variant intron_variant	MODIFIER	HG02818.hp2 HG02818.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0165 a0001c0001t0001g0165	1	320	0.0031	-32	c.188 others(49): Show c.188-4503_188-4472delGTACACCATCAGTCACATCAGTCAGTAC ACCA	CSNK1D	ENSG00000141551.15	transcript	ENST00000314028.11	protein_coding	2/8			chr17	TogoVar
CSNK1G1_chr15_64160525_64361173	64277632	AATATTAA others(25): Show AATATTAATATATTTAATAATATAGCAATATTG	A A	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG02572.hp1 HG03453.hp1 others(1): Show HG01109.hp2 HG02572.hp1 HG03453.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0019 a0001c0001t0010 a0001c0001t0019	a0001c0001t0010g0115 a0001c0001t0010g0120 a0001c0001t0010g0122 others(1): Show a0001c0001t0010g0115 a0001c0001t0010g0120 a0001c0001t0010g0122 a0001c0001t0019g0123	4	176	0.0227	-32	c.182 others(51): Show c.182-18423_182-18392delCAATATTGCTATATTATTAAATATAT TAATAT	CSNK1G1	ENSG00000169118.18	transcript	ENST00000303052.13	protein_coding	2/11			chr15	TogoVar
CSNK1G1_chr15_64160525_64361173	64286332	ATGTTATT others(25): Show ATGTTATTGTTAACAATATTGTTAACATGTTAT	A A	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG02615.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0172 a0001c0001t0005g0172	1	176	0.0057	-32	c.181 others(51): Show c.181+13955_181+13986delATAACATGTTAACAATATTGTTAACA ATAACA	CSNK1G1	ENSG00000169118.18	transcript	ENST00000303052.13	protein_coding	2/11			chr15	TogoVar
CSNKA2IP_chr3_88333456_88472594	88446026	TTTCTTTT others(25): Show TTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTC	T T	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG02083.hp1 HG03831.hp1 others(2): Show HG00741.hp2 HG02083.hp1 HG03831.hp1 HG03831.hp2 NA18966.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0328 a0001c0001t0002g0345 a0001c0001t0002g0346 others(2): Show a0001c0001t0002g0328 a0001c0001t0002g0345 a0001c0001t0002g0346 a0001c0001t0002g0361 a0001c0001t0002g0370	5	386	0.0130	-32	c.-27 others(53): Show c.-270-19059_-270-19028delCTTTTCTTTCTTTCTTTCTTTCTT TCTTTCTT	CSNKA2IP	ENSG00000283434.2	transcript	ENST00000637986.2	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr3	TogoVar
CSRP3_chr11_19177030_19206983	19197337	TCTCCCTC others(25): Show TCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC	T T	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01081.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0204 a0001c0001t0001g0204	1	416	0.0024	-32	c.-29 others(49): Show c.-29+4585_-29+4616delGGAGGGAGGGAGGGAGGGAGGGAGGGAG GGAG	CSRP3	ENSG00000129170.10	transcript	ENST00000265968.9	protein_coding	1/5			chr11	TogoVar
CSRP3_chr11_19177030_19206983	19197360	CCCTCCCT others(25): Show CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTT	C C	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00639.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0103 a0001c0001t0001g0103	1	416	0.0024	-32	c.-29 others(49): Show c.-29+4562_-29+4593delAAGGGAGGGAGGGAGGGAGGGAGGGAGG GAGG	CSRP3	ENSG00000129170.10	transcript	ENST00000265968.9	protein_coding	1/5			chr11	TogoVar
CSRP3_chr11_19177030_19206983	19197364	CCCTCCCT others(25): Show CCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTT	C C	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00280.hp1 HG00323.hp1 others(105): Show HG00099.hp2 HG00280.hp1 HG00323.hp1 HG00423.hp1 HG00544.hp1 HG00544.hp2 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp2 HG00735.hp2 HG00741.hp1 HG00741.hp2 HG01070.hp1 HG01074.hp1 HG01123.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp2 HG01256.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp2 HG01346.hp2 HG01361.hp1 HG01361.hp2 HG01496.hp1 HG01516.hp2 HG01517.hp2 HG01928.hp1 HG01934.hp2 HG01943.hp2 HG01975.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp2 HG02055.hp2 HG02071.hp2 HG02074.hp2 HG02083.hp1 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02135.hp1 HG02148.hp2 HG02165.hp1 HG02273.hp2 HG02602.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp2 HG03239.hp2 HG03492.hp1 HG03669.hp2 HG03704.hp2 HG03942.hp2 HG04184.hp1 HG04228.hp1 NA18946.hp1 NA18950.hp2 NA18951.hp2 NA18955.hp1 NA18956.hp2 NA18960.hp1 NA18961.hp1 NA18968.hp2 NA18969.hp2 NA18970.hp1 NA18973.hp2 NA18974.hp2 NA18975.hp2 NA18978.hp1 NA18979.hp1 NA18980.hp2 NA18986.hp1 NA18986.hp2 NA18987.hp1 NA18988.hp1 NA18990.hp1 NA18991.hp1 NA18992.hp2 NA18994.hp2 NA18998.hp1 NA19003.hp1 NA19030.hp1 NA19058.hp2 NA19063.hp1 NA19064.hp2 NA19067.hp2 NA19068.hp1 NA19070.hp1 NA19078.hp1 NA19079.hp2 NA19081.hp2 NA19088.hp1 NA19088.hp2 NA19091.hp1 NA20300.hp1 NA20752.hp2 NA20805.hp1 NA20905.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0006 a0001c0002t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(80): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0033 a0001c0001t0001g0035 a0001c0001t0001g0043 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0111 a0001c0001t0001g0112 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0150 a0001c0001t0001g0175 a0001c0001t0001g0270 a0001c0001t0001g0272 a0001c0001t0001g0277 a0001c0001t0001g0292 a0001c0001t0001g0317 a0001c0001t0001g0318 a0001c0001t0001g0327 a0001c0001t0002g0097 a0001c0001t0002g0100 a0001c0001t0004g0038 a0001c0001t0006g0080 a0001c0002t0001g0288 a0001c0002t0001g0293	108	416	0.2596	-32	c.-29 others(49): Show c.-29+4558_-29+4589delAAGGAAGGGAGGGAGGGAGGGAGGGAGG GAGG	CSRP3	ENSG00000129170.10	transcript	ENST00000265968.9	protein_coding	1/5			chr11	TogoVar
CSRP3_chr11_19177030_19206983	19197368	CCCTCCCT others(25): Show CCCTCCCTCCCTCCCTCCCTCCCTTCCTTCCTT	C C	intron_variant intron_variant	MODIFIER	HG02818.hp1 HG02818.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0278 a0001c0001t0001g0278	1	416	0.0024	-32	c.-29 others(49): Show c.-29+4554_-29+4585delAAGGAAGGAAGGGAGGGAGGGAGGGAGG GAGG	CSRP3	ENSG00000129170.10	transcript	ENST00000265968.9	protein_coding	1/5			chr11	TogoVar
CSRP3_chr11_19177030_19206983	19197380	CCCTCCCT others(25): Show CCCTCCCTCCCTTCCTTCCTTCCTTCCTTCCTT	C C	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02647.hp1 HG02809.hp1 HG01884.hp2 HG02647.hp1 HG02809.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0235 a0001c0001t0003g0231 a0001c0001t0003g0232 a0001c0001t0001g0235 a0001c0001t0003g0231 a0001c0001t0003g0232	3	416	0.0072	-32	c.-29 others(49): Show c.-29+4542_-29+4573delAAGGAAGGAAGGAAGGAAGGAAGGGAGG GAGG	CSRP3	ENSG00000129170.10	transcript	ENST00000265968.9	protein_coding	1/5			chr11	TogoVar
CST9L_chr20_23559732_23573484	23560936	TTTCTTTC others(25): Show TTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18906.hp1 NA18906.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0029 a0002c0002t0001g0029	1	392	0.0026	-32	c.39 others(43): Show c.3980_*4011delGGAAAGAAGGAAAGAAAGAAAGAAAGAAAGAA	CST9L	ENSG00000101435.5	transcript	ENST00000376979.4	protein_coding		3795		chr20	TogoVar

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