Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
LRRK1_chr15_100914357_101083257	101067421	ATGTGTGT others(25): Show ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	HG01496.hp2 HG01496.hp2	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0257 a0001c0007t0257	a0001c0007t0257g0232 a0001c0007t0257g0232	1	338	0.0030	-32	c.587 others(49): Show c.5870+692_5870+723delGTGTGTGTGTGTGTGTGTGTGTGTGTGT GTGT	LRRK1	ENSG00000154237.13	transcript	ENST00000388948.8	protein_coding	33/33		INFO_REALIGN_3_PRIME	chr15	TogoVar
LRRK1_chr15_100914357_101083257	101082497	CATGTATG others(25): Show CATGTATGTATGTATGCATGTATGCATGTATGT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02071.hp1 HG02071.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0124 a0002c0001t0124	a0002c0001t0124g0288 a0002c0001t0124g0288	1	338	0.0030	-32	c.13 others(45): Show c.13650_*13681delATGTATGTATGTATGCATGTATGCATGTATGT	LRRK1	ENSG00000154237.13	transcript	ENST00000388948.8	protein_coding		4241		chr15	TogoVar
LRRTM3_chr10_66921036_67106551	66957397	TATATATA others(25): Show TATATATATATATATATGCATATATATATATGC	T T	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG01070.hp2 HG01081.hp2 others(46): Show HG00735.hp2 HG01070.hp2 HG01081.hp2 HG01243.hp1 HG01433.hp1 HG02027.hp1 HG02055.hp2 HG02071.hp1 HG02132.hp2 HG02145.hp2 HG02615.hp1 HG02622.hp1 HG02622.hp2 HG02717.hp1 HG02723.hp1 HG02735.hp2 HG02896.hp2 HG02922.hp1 HG03130.hp1 HG03195.hp2 HG03209.hp1 HG03471.hp2 HG03540.hp2 HG03834.hp2 HG03927.hp1 HG04204.hp1 NA18522.hp1 NA18522.hp2 NA18941.hp2 NA18942.hp1 NA18943.hp2 NA18947.hp2 NA18953.hp1 NA18957.hp2 NA18960.hp1 NA18964.hp2 NA18970.hp1 NA18993.hp2 NA19003.hp1 NA19005.hp1 NA19006.hp1 NA19009.hp1 NA19055.hp2 NA19070.hp2 NA19076.hp2 NA19084.hp2 NA19086.hp1 NA19091.hp2 NA19240.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 a0001c0001t0015 a0001c0001t0018 a0001c0001t0025 a0002c0002t0004	a0001c0001t0001g0015 a0001c0001t0001g0125 a0001c0001t0001g0199 others(46): Show a0001c0001t0001g0015 a0001c0001t0001g0125 a0001c0001t0001g0199 a0001c0001t0001g0200 a0001c0001t0001g0201 a0001c0001t0001g0202 a0001c0001t0001g0204 a0001c0001t0001g0205 a0001c0001t0001g0206 a0001c0001t0001g0208 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0213 a0001c0001t0001g0225 a0001c0001t0001g0226 a0001c0001t0001g0227 a0001c0001t0001g0234 a0001c0001t0001g0235 a0001c0001t0001g0236 a0001c0001t0001g0237 a0001c0001t0001g0238 a0001c0001t0001g0240 a0001c0001t0001g0271 a0001c0001t0001g0272 a0001c0001t0001g0273 a0001c0001t0001g0280 a0001c0001t0001g0281 a0001c0001t0001g0283 a0001c0001t0001g0284 a0001c0001t0002g0074 a0001c0001t0002g0192 a0001c0001t0002g0193 a0001c0001t0002g0195 a0001c0001t0002g0196 a0001c0001t0002g0198 a0001c0001t0002g0207 a0001c0001t0002g0210 a0001c0001t0003g0253 a0001c0001t0003g0254 a0001c0001t0006g0261 a0001c0001t0015g0294 a0001c0001t0018g0197 a0001c0001t0025g0160 a0002c0002t0004g0075 a0002c0002t0004g0174 a0002c0002t0004g0175 a0002c0002t0004g0176 a0002c0002t0004g0203 a0002c0002t0004g0209	49	294	0.1667	-32	c.153 others(53): Show c.1536+28958_1536+28989delATATGCATATATATATATGCATAT ATATATAT	LRRTM3	ENSG00000198739.11	transcript	ENST00000361320.5	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRRTM4_chr2_76742685_77527376	77477903	AAAAGAAA others(25): Show AAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	A A	intron_variant intron_variant	MODIFIER	NA18965.hp1 NA18965.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0037 a0001c0001t0004g0037	1	128	0.0078	-32	c.155 others(53): Show c.1551+40383_1551+40414delCTTTCTTTCTTTCTTTCTTTCTTT CTTTCTTT	LRRTM4	ENSG00000176204.14	transcript	ENST00000409884.6	protein_coding	3/3			chr2	TogoVar
LSAMP_chr3_115797374_116450487	115839258	TTTCTTTC others(25): Show TTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCC	T T	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG01243.hp2 HG03453.hp1 HG00735.hp2 HG01243.hp2 HG03453.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0019 a0001c0001t0041 a0001c0001t0006 a0001c0001t0019 a0001c0001t0041	a0001c0001t0006g0102 a0001c0001t0019g0003 a0001c0001t0041g0021 a0001c0001t0006g0102 a0001c0001t0019g0003 a0001c0001t0041g0021	3	104	0.0289	-32	c.919 others(49): Show c.919+2555_919+2586delGGAAGGAAGGAAGGAAGGAAGGAAGGAA AGAA	LSAMP	ENSG00000185565.13	transcript	ENST00000490035.7	protein_coding	6/6			chr3	TogoVar
LSAMP_chr3_115797374_116450487	115861126	TTTCTTTC others(25): Show TTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCC	T T	intron_variant intron_variant	MODIFIER	HG03195.hp1 HG03195.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0073 a0001c0001t0073	a0001c0001t0073g0104 a0001c0001t0073g0104	1	104	0.0096	-32	c.515 others(49): Show c.515-8541_515-8510delGGAAGGAAGGAAGGAAGGAAGGAAGGAA AGAA	LSAMP	ENSG00000185565.13	transcript	ENST00000490035.7	protein_coding	3/6			chr3	TogoVar
LSAMP_chr3_115797374_116450487	115861130	TTTCCTTC others(25): Show TTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	T T	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02572.hp2 HG02622.hp1 others(4): Show HG02258.hp2 HG02572.hp2 HG02622.hp1 HG02886.hp1 HG03041.hp1 HG03041.hp2 HG04184.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0005 a0001c0001t0022 a0001c0001t0030 others(4): Show a0001c0001t0005 a0001c0001t0022 a0001c0001t0030 a0001c0001t0057 a0001c0001t0066 a0001c0001t0071 a0002c0003t0007	a0001c0001t0005g0048 a0001c0001t0022g0074 a0001c0001t0030g0028 others(4): Show a0001c0001t0005g0048 a0001c0001t0022g0074 a0001c0001t0030g0028 a0001c0001t0057g0008 a0001c0001t0066g0005 a0001c0001t0071g0045 a0002c0003t0007g0004	7	104	0.0673	-32	c.515 others(49): Show c.515-8545_515-8514delGGAAGGAAGGAAGGAAGGAAGGAAGGAA GGAA	LSAMP	ENSG00000185565.13	transcript	ENST00000490035.7	protein_coding	3/6			chr3	TogoVar
LSAMP_chr3_115797374_116450487	115937769	TGCTAAAT others(25): Show TGCTAAATGATATTGGCTAATCCTGTATGGCCA	T T	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG00558.hp2 HG00733.hp1 others(91): Show HG00558.hp1 HG00558.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG01069.hp1 HG01069.hp2 HG01106.hp1 HG01106.hp2 HG01175.hp1 HG01175.hp2 HG01243.hp1 HG01243.hp2 HG01257.hp1 HG01257.hp2 HG01261.hp1 HG01261.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01978.hp1 HG01978.hp2 HG01993.hp1 HG01993.hp2 HG02055.hp1 HG02055.hp2 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02145.hp1 HG02145.hp2 HG02258.hp2 HG02293.hp1 HG02293.hp2 HG02451.hp1 HG02523.hp1 HG02523.hp2 HG02572.hp1 HG02622.hp2 HG02717.hp1 HG02717.hp2 HG02735.hp1 HG02735.hp2 HG02809.hp1 HG02818.hp1 HG02818.hp2 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02922.hp1 HG02922.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp2 HG03195.hp1 HG03453.hp2 HG03540.hp1 HG03540.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG04184.hp1 HG04184.hp2 NA18906.hp1 NA18906.hp2 NA18960.hp1 NA18960.hp2 NA18977.hp1 NA18977.hp2 NA18984.hp1 NA18984.hp2 NA19011.hp1 NA19011.hp2 NA19043.hp1 NA19043.hp2 NA19060.hp1 NA19060.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0004 others(2): Show a0001c0001 a0001c0002 a0001c0004 a0001c0005 a0002c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(70): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0013 a0001c0001t0014 a0001c0001t0015 a0001c0001t0016 a0001c0001t0017 a0001c0001t0018 a0001c0001t0019 a0001c0001t0020 a0001c0001t0021 a0001c0001t0023 a0001c0001t0024 a0001c0001t0025 a0001c0001t0026 a0001c0001t0027 a0001c0001t0028 a0001c0001t0029 a0001c0001t0030 a0001c0001t0031 a0001c0001t0032 a0001c0001t0033 a0001c0001t0034 a0001c0001t0035 a0001c0001t0036 a0001c0001t0037 a0001c0001t0038 a0001c0001t0039 a0001c0001t0040 a0001c0001t0042 a0001c0001t0043 a0001c0001t0045 a0001c0001t0046 a0001c0001t0047 a0001c0001t0050 a0001c0001t0055 a0001c0001t0058 a0001c0001t0059 a0001c0001t0060 a0001c0001t0061 a0001c0001t0062 a0001c0001t0063 a0001c0001t0064 a0001c0001t0065 a0001c0001t0067 a0001c0001t0068 a0001c0001t0069 a0001c0001t0070 a0001c0001t0071 a0001c0001t0072 a0001c0001t0073 a0001c0002t0001 a0001c0002t0009 a0001c0002t0013 a0001c0002t0014 a0001c0002t0049 a0001c0002t0051 a0001c0002t0052 a0001c0002t0053 a0001c0002t0054 a0001c0002t0056 a0001c0004t0016 a0001c0005t0001 a0002c0003t0007	a0001c0001t0001g0016 a0001c0001t0001g0033 a0001c0001t0001g0035 others(91): Show a0001c0001t0001g0016 a0001c0001t0001g0033 a0001c0001t0001g0035 a0001c0001t0001g0040 a0001c0001t0001g0042 a0001c0001t0001g0047 a0001c0001t0001g0058 a0001c0001t0001g0079 a0001c0001t0001g0085 a0001c0001t0002g0014 a0001c0001t0002g0027 a0001c0001t0002g0053 a0001c0001t0002g0061 a0001c0001t0002g0094 a0001c0001t0003g0078 a0001c0001t0004g0024 a0001c0001t0004g0088 a0001c0001t0005g0048 a0001c0001t0005g0103 a0001c0001t0006g0102 a0001c0001t0008g0032 a0001c0001t0008g0041 a0001c0001t0009g0099 a0001c0001t0010g0043 a0001c0001t0010g0054 a0001c0001t0011g0068 a0001c0001t0011g0095 a0001c0001t0012g0037 a0001c0001t0012g0038 a0001c0001t0013g0044 a0001c0001t0014g0092 a0001c0001t0015g0011 a0001c0001t0015g0059 a0001c0001t0016g0020 a0001c0001t0017g0097 a0001c0001t0017g0101 a0001c0001t0018g0001 a0001c0001t0019g0003 a0001c0001t0020g0002 a0001c0001t0021g0070 a0001c0001t0023g0077 a0001c0001t0024g0015 a0001c0001t0025g0013 a0001c0001t0026g0089 a0001c0001t0027g0056 a0001c0001t0028g0031 a0001c0001t0029g0072 a0001c0001t0030g0028 a0001c0001t0031g0050 a0001c0001t0032g0055 a0001c0001t0033g0006 a0001c0001t0034g0018 a0001c0001t0035g0052 a0001c0001t0036g0080 a0001c0001t0037g0087 a0001c0001t0038g0082 a0001c0001t0039g0030 a0001c0001t0040g0046 a0001c0001t0042g0022 a0001c0001t0043g0017 a0001c0001t0045g0012 a0001c0001t0046g0098 a0001c0001t0047g0069 a0001c0001t0050g0066 a0001c0001t0055g0019 a0001c0001t0058g0093 a0001c0001t0059g0060 a0001c0001t0060g0057 a0001c0001t0061g0075 a0001c0001t0062g0081 a0001c0001t0063g0096 a0001c0001t0064g0076 a0001c0001t0065g0025 a0001c0001t0067g0064 a0001c0001t0068g0091 a0001c0001t0069g0073 a0001c0001t0070g0026 a0001c0001t0071g0045 a0001c0001t0072g0063 a0001c0001t0073g0104 a0001c0002t0001g0083 a0001c0002t0001g0084 a0001c0002t0009g0090 a0001c0002t0013g0034 a0001c0002t0014g0010 a0001c0002t0049g0036 a0001c0002t0051g0049 a0001c0002t0052g0051 a0001c0002t0053g0029 a0001c0002t0054g0086 a0001c0002t0056g0062 a0001c0004t0016g0039 a0001c0005t0001g0067 a0002c0003t0007g0004	94	104	0.9039	-32	c.514 others(51): Show c.514+81714_514+81745delTGGCCATACAGGATTAGCCAATATCA TTTAGC	LSAMP	ENSG00000185565.13	transcript	ENST00000490035.7	protein_coding	3/6			chr3	TogoVar
LSAMP_chr3_115797374_116450487	116031538	CTTTTTTT others(25): Show CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	NA18906.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0021 a0001c0001t0021	a0001c0001t0021g0070 a0001c0001t0021g0070	1	104	0.0096	-32	c.389 others(51): Show c.389-11930_389-11899delAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAA	LSAMP	ENSG00000185565.13	transcript	ENST00000490035.7	protein_coding	2/6			chr3	TogoVar
LSG1_chr3_194635791_194677191	194645503	CACACACA others(25): Show CACACACACACACACACACACACACACAGACAG	C C	intron_variant intron_variant	MODIFIER	HG01175.hp2 HG01261.hp2 HG02155.hp1 others(3): Show HG01175.hp2 HG01261.hp2 HG02155.hp1 NA18944.hp2 NA19060.hp2 NA19085.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0003 a0001c0001t0006 a0001c0001t0028 others(2): Show a0001c0001t0003 a0001c0001t0006 a0001c0001t0028 a0001c0003t0008 a0001c0003t0055	a0001c0001t0003g0259 a0001c0001t0006g0250 a0001c0001t0028g0249 others(3): Show a0001c0001t0003g0259 a0001c0001t0006g0250 a0001c0001t0028g0249 a0001c0003t0008g0155 a0001c0003t0008g0185 a0001c0003t0055g0175	6	408	0.0147	-32	c.162 others(49): Show c.1623+629_1623+660delCTGTCTGTGTGTGTGTGTGTGTGTGTGT GTGT	LSG1	ENSG00000041802.11	transcript	ENST00000265245.10	protein_coding	12/13			chr3	TogoVar
LSG1_chr3_194635791_194677191	194645543	CACACACA others(25): Show CACACACACACACACACACACACACACAGACAG	C C	intron_variant intron_variant	MODIFIER	HG03471.hp1 HG04184.hp1 HG04199.hp2 others(1): Show HG03471.hp1 HG04184.hp1 HG04199.hp2 NA19063.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0003 a0002c0002 a0003c0004 a0001c0003 a0002c0002 a0003c0004	a0001c0003t0015 a0002c0002t0012 a0002c0002t0051 others(1): Show a0001c0003t0015 a0002c0002t0012 a0002c0002t0051 a0003c0004t0002	a0001c0003t0015g0205 a0002c0002t0012g0381 a0002c0002t0051g0141 others(1): Show a0001c0003t0015g0205 a0002c0002t0012g0381 a0002c0002t0051g0141 a0003c0004t0002g0060	4	408	0.0098	-32	c.162 others(49): Show c.1623+589_1623+620delCTGTCTGTGTGTGTGTGTGTGTGTGTGT GTGT	LSG1	ENSG00000041802.11	transcript	ENST00000265245.10	protein_coding	12/13			chr3	TogoVar
LSM11_chr5_157738712_157765709	157755576	TGGAATTT others(25): Show TGGAATTTACATTTTAGATACTATAGGGGAAAG	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03654.hp1 HG03654.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0026 a0001c0001t0026	a0001c0001t0026g0002 a0001c0001t0026g0002	1	430	0.0023	-32	c.31 others(41): Show c.313_*344delGGAATTTACATTTTAGATACTATAGGGGAAAG	LSM11	ENSG00000155858.6	transcript	ENST00000286307.6	protein_coding	4/4	313		chr5	TogoVar
LSM8_chr7_118179164_118209035	118206968	TTATATAT others(25): Show TTATATATATATATATATATATATATATATATA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00140.hp2 HG00323.hp2 HG01069.hp1 others(13): Show HG00140.hp2 HG00323.hp2 HG01069.hp1 HG01071.hp1 HG01074.hp2 HG01258.hp2 HG01361.hp2 HG01943.hp2 HG02109.hp1 HG02735.hp1 HG02735.hp2 HG03704.hp2 HG03834.hp1 HG03834.hp2 HG04228.hp1 NA18960.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0017 others(5): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0017 a0001c0001t0026 a0001c0001t0053 a0001c0001t0063 a0001c0001t0064 a0001c0001t0107	a0001c0001t0001g0012 a0001c0001t0001g0047 a0001c0001t0003g0001 others(7): Show a0001c0001t0001g0012 a0001c0001t0001g0047 a0001c0001t0003g0001 a0001c0001t0017g0002 a0001c0001t0017g0006 a0001c0001t0026g0002 a0001c0001t0053g0002 a0001c0001t0063g0002 a0001c0001t0064g0002 a0001c0001t0107g0003	16	414	0.0387	-32	c.14 others(45): Show c.14967_*14998delTATATATATATATATATATATATATATATATA	LSM8	ENSG00000128534.8	transcript	ENST00000249299.7	protein_coding		2934		chr7	TogoVar
LTBP1_chr2_32941953_33404509	33370068	CTCAGTTT others(25): Show CTCAGTTTCTCATGTGAAAATAATATCTGCCTT	C C	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG01361.hp2 HG01496.hp2 others(12): Show HG01106.hp2 HG01361.hp2 HG01496.hp2 HG02109.hp2 HG02257.hp2 HG02559.hp2 HG02630.hp2 HG02723.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp2 HG03098.hp1 HG03579.hp1 NA20129.hp1 NA20129.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0001c0006 a0001c0012 others(5): Show a0001c0001 a0001c0006 a0001c0012 a0001c0013 a0001c0017 a0001c0047 a0002c0030 a0004c0044	a0001c0001t0002 a0001c0001t0006 a0001c0001t0011 others(12): Show a0001c0001t0002 a0001c0001t0006 a0001c0001t0011 a0001c0006t0001 a0001c0006t0003 a0001c0006t0012 a0001c0006t0031 a0001c0012t0007 a0001c0013t0011 a0001c0013t0022 a0001c0017t0012 a0001c0017t0023 a0001c0047t0001 a0002c0030t0005 a0004c0044t0012	a0001c0001t0002g0007 a0001c0001t0006g0115 a0001c0001t0011g0154 others(12): Show a0001c0001t0002g0007 a0001c0001t0006g0115 a0001c0001t0011g0154 a0001c0006t0001g0065 a0001c0006t0003g0132 a0001c0006t0012g0089 a0001c0006t0031g0041 a0001c0012t0007g0067 a0001c0013t0011g0068 a0001c0013t0022g0074 a0001c0017t0012g0114 a0001c0017t0023g0051 a0001c0047t0001g0160 a0002c0030t0005g0151 a0004c0044t0012g0063	15	164	0.0915	-32	c.471 others(51): Show c.4711+4570_4711+4601delTTTCTCATGTGAAAATAATATCTGCC TTTCAG	LTBP1	ENSG00000049323.16	transcript	ENST00000404816.7	protein_coding	31/33		INFO_REALIGN_3_PRIME	chr2	TogoVar
LTBP4_chr19_40596369_40634818	40625252	TTATATAT others(25): Show TTATATATATATATATATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG03209.hp1 HG02486.hp1 HG03209.hp1	a0002 a0006 a0002 a0006	a0002c0002 a0006c0034 a0002c0002 a0006c0034	a0002c0002t0002 a0006c0034t0001 a0002c0002t0002 a0006c0034t0001	a0002c0002t0002g0094 a0006c0034t0001g0027 a0002c0002t0002g0094 a0006c0034t0001g0027	2	338	0.0059	-32	c.383 others(49): Show c.3833-571_3833-540delATATATATATATATATATATATATATAT ATAT	LTBP4	ENSG00000090006.18	transcript	ENST00000396819.8	protein_coding	26/29		INFO_REALIGN_3_PRIME	chr19	TogoVar
LTBP4_chr19_40596369_40634818	40625286	ATATATAT others(25): Show ATATATATATATATATATATATATATATATATT	A A	intron_variant intron_variant	MODIFIER	HG00673.hp2 HG00673.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0001 a0003c0004t0001	a0003c0004t0001g0049 a0003c0004t0001g0049	1	338	0.0030	-32	c.383 others(49): Show c.3833-569_3833-538delATATATATATATATATATATATATATAT ATTT	LTBP4	ENSG00000090006.18	transcript	ENST00000396819.8	protein_coding	26/29		INFO_REALIGN_3_PRIME	chr19	TogoVar
LTBP4_chr19_40596369_40634818	40633760	AAAAGAAA others(25): Show AAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01109.hp2 HG01109.hp2	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0001 a0001c0006t0001	a0001c0006t0001g0163 a0001c0006t0001g0163	1	338	0.0030	-32	c.42 others(43): Show c.4211_*4242delAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	LTBP4	ENSG00000090006.18	transcript	ENST00000396819.8	protein_coding		3943		chr19	TogoVar
LUC7L3_chr17_50714603_50761219	50729896	TTATATAT others(25): Show TTATATATATATATATATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG01358.hp2 HG01358.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0146 a0001c0001t0001g0146	1	392	0.0026	-32	c.100 others(49): Show c.100-7046_100-7015delATATATATATATATATATATATATATAT ATAT	LUC7L3	ENSG00000108848.16	transcript	ENST00000505658.6	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr17	TogoVar
LUC7L_chr16_183990_234449	186678	GGGGGAAC others(25): Show GGGGGAACAGCGACACGGGGGGAACAGCGACAC	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00609.hp1 HG00609.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0200 a0001c0001t0001g0200	1	350	0.0029	-32	c.24 others(43): Show c.2488_*2519delGTGTCGCTGTTCCCCCCGTGTCGCTGTTCCCC	LUC7L	ENSG00000007392.17	transcript	ENST00000293872.13	protein_coding		2311		chr16	TogoVar
LUC7L_chr16_183990_234449	186831	GGGGGAAC others(25): Show GGGGGAACAGCGACACGGGGGGAACAGCGACAC	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02056.hp1 HG02056.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0183 a0001c0001t0001g0183	1	350	0.0029	-32	c.23 others(43): Show c.2335_*2366delGTGTCGCTGTTCCCCCCGTGTCGCTGTTCCCC	LUC7L	ENSG00000007392.17	transcript	ENST00000293872.13	protein_coding		2158		chr16	TogoVar
LUC7L_chr16_183990_234449	186916	GGGGGAAC others(25): Show GGGGGAACAGCGACACGGGGGGAACAGCGACAC	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18995.hp2 NA18995.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0227 a0001c0001t0001g0227	1	350	0.0029	-32	c.22 others(43): Show c.2250_*2281delGTGTCGCTGTTCCCCCCGTGTCGCTGTTCCCC	LUC7L	ENSG00000007392.17	transcript	ENST00000293872.13	protein_coding		2073		chr16	TogoVar
LUM_chr12_91097629_91116494	91107263	GAAAGAAA others(25): Show GAAAGAAAGAAAGAAAGAAAGAAAGAGAAAGAA	G G	intron_variant intron_variant	MODIFIER	NA18941.hp1 NA18941.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0109 a0001c0001t0001g0109	1	384	0.0026	-32	c.862 others(47): Show c.862+823_862+854delTTCTTTCTCTTTCTTTCTTTCTTTCTTTCT TT	LUM	ENSG00000139329.5	transcript	ENST00000266718.5	protein_coding	2/2			chr12	TogoVar
LUM_chr12_91097629_91116494	91107283	GAAAGAGA others(25): Show GAAAGAGAAAGAAAGAAAGAAAGAAAGAAAGAA	G G	intron_variant intron_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0183 a0001c0001t0005g0183	1	384	0.0026	-32	c.862 others(47): Show c.862+803_862+834delTTCTTTCTTTCTTTCTTTCTTTCTTTCTCT TT	LUM	ENSG00000139329.5	transcript	ENST00000266718.5	protein_coding	2/2			chr12	TogoVar
LUZP2_chr11_24492053_25087638	24574211	CCTTTCTT others(25): Show CCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	C C	intron_variant intron_variant	MODIFIER	HG03041.hp2 HG06807.hp2 NA19043.hp1 others(1): Show HG03041.hp2 HG06807.hp2 NA19043.hp1 NA21309.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 others(1): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0002c0002t0009	a0001c0001t0002g0048 a0001c0001t0003g0081 a0001c0001t0005g0006 others(1): Show a0001c0001t0002g0048 a0001c0001t0003g0081 a0001c0001t0005g0006 a0002c0002t0009g0079	4	116	0.0345	-32	c.62+ others(49): Show c.62+76926_62+76957delTCTTTCTTTCTTTCTTTCTTTCTTTCTT TCTT	LUZP2	ENSG00000187398.12	transcript	ENST00000336930.11	protein_coding	1/11		INFO_REALIGN_3_PRIME	chr11	TogoVar
LUZP2_chr11_24492053_25087638	24741831	TTATATAT others(25): Show TTATATATATTTATAAATATAAATATATAAATG	T T	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02055.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0016	a0001c0001t0016g0033 a0001c0001t0016g0033	1	116	0.0086	-32	c.333 others(49): Show c.333+3550_333+3581delAATATATAAATGTATATATATTTATAAA TATA	LUZP2	ENSG00000187398.12	transcript	ENST00000336930.11	protein_coding	4/11		INFO_REALIGN_3_PRIME	chr11	TogoVar
LUZP2_chr11_24492053_25087638	24926256	TGTGTGTA others(25): Show TGTGTGTATATATATACGTGTATATATATATAC	T T	intron_variant intron_variant	MODIFIER	HG02080.hp1 HG02523.hp2 HG02080.hp1 HG02523.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0015 a0001c0001t0007g0103 a0001c0001t0007g0015 a0001c0001t0007g0103	2	116	0.0172	-32	c.522 others(51): Show c.522+11739_522+11770delATATATATATACGTGTGTATATATAT ACGTGT	LUZP2	ENSG00000187398.12	transcript	ENST00000336930.11	protein_coding	7/11		INFO_REALIGN_3_PRIME	chr11	TogoVar
LUZP2_chr11_24492053_25087638	24926358	TGTGTATA others(25): Show TGTGTATATATATATACGTGTGTATATATATAC	T T	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00423.hp2 HG00621.hp1 others(42): Show HG00423.hp1 HG00423.hp2 HG00621.hp1 HG00621.hp2 HG01106.hp2 HG01109.hp2 HG01256.hp1 HG01258.hp1 HG01258.hp2 HG01261.hp2 HG01516.hp2 HG01943.hp1 HG01975.hp1 HG01975.hp2 HG02055.hp2 HG02083.hp2 HG02129.hp1 HG02129.hp2 HG02145.hp2 HG02165.hp1 HG02258.hp2 HG02273.hp1 HG02523.hp1 HG02559.hp1 HG02896.hp2 HG02965.hp2 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03041.hp1 HG03098.hp2 HG03239.hp2 HG03486.hp2 HG03540.hp2 HG03579.hp1 HG03834.hp2 HG04204.hp2 HG04228.hp2 NA18612.hp1 NA18906.hp1 NA18981.hp1 NA19043.hp1 NA19070.hp1 NA19240.hp2 NA21309.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0003 a0002c0002 others(1): Show a0001c0001 a0001c0003 a0002c0002 a0003c0004	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(17): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0014 a0001c0001t0016 a0001c0001t0017 a0001c0001t0020 a0001c0001t0021 a0001c0001t0030 a0001c0001t0031 a0001c0001t0038 a0001c0003t0004 a0001c0003t0012 a0001c0003t0035 a0002c0002t0001 a0002c0002t0008 a0002c0002t0025 a0002c0002t0026 a0002c0002t0027 a0003c0004t0018	a0001c0001t0002g0025 a0001c0001t0002g0113 a0001c0001t0003g0081 others(42): Show a0001c0001t0002g0025 a0001c0001t0002g0113 a0001c0001t0003g0081 a0001c0001t0004g0060 a0001c0001t0004g0062 a0001c0001t0004g0075 a0001c0001t0004g0078 a0001c0001t0004g0085 a0001c0001t0014g0002 a0001c0001t0014g0044 a0001c0001t0016g0033 a0001c0001t0017g0018 a0001c0001t0020g0097 a0001c0001t0021g0093 a0001c0001t0030g0108 a0001c0001t0031g0109 a0001c0001t0038g0090 a0001c0003t0004g0004 a0001c0003t0004g0050 a0001c0003t0004g0055 a0001c0003t0012g0046 a0001c0003t0012g0052 a0001c0003t0012g0111 a0001c0003t0035g0094 a0002c0002t0001g0008 a0002c0002t0001g0009 a0002c0002t0001g0011 a0002c0002t0001g0014 a0002c0002t0001g0023 a0002c0002t0001g0026 a0002c0002t0001g0057 a0002c0002t0001g0061 a0002c0002t0001g0063 a0002c0002t0001g0064 a0002c0002t0001g0066 a0002c0002t0001g0067 a0002c0002t0001g0076 a0002c0002t0001g0083 a0002c0002t0001g0092 a0002c0002t0008g0021 a0002c0002t0008g0104 a0002c0002t0025g0072 a0002c0002t0026g0010 a0002c0002t0027g0100 a0003c0004t0018g0098	45	116	0.3879	-32	c.522 others(51): Show c.522+11825_522+11856delATATATATATACGTGTGTATATATAT ACGTGT	LUZP2	ENSG00000187398.12	transcript	ENST00000336930.11	protein_coding	7/11		INFO_REALIGN_3_PRIME	chr11	TogoVar
LUZP4_chrX_115284715_115312563	115309296	AATCCCTA others(25): Show AATCCCTAATATATTGTATGTCATTCTGAAGAC	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00639.hp1 HG01975.hp1 HG02273.hp1 others(10): Show HG00639.hp1 HG01975.hp1 HG02273.hp1 HG03239.hp1 NA18747.hp1 NA18939.hp2 NA18949.hp1 NA18956.hp2 NA18959.hp1 NA19006.hp1 NA19058.hp1 NA19078.hp2 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0006 a0001c0001t0001g0017 a0001c0001t0001g0073 others(2): Show a0001c0001t0001g0006 a0001c0001t0001g0017 a0001c0001t0001g0073 a0001c0001t0001g0085 a0001c0001t0001g0095	13	280	0.0464	-32	c.24 others(43): Show c.2493_*2524delATCCCTAATATATTGTATGTCATTCTGAAGAC	LUZP4	ENSG00000102021.11	transcript	ENST00000371920.4	protein_coding		1734		chrX	TogoVar
LY96_chr8_73986392_74034079	73996368	CATTCCTT others(25): Show CATTCCTTTCTTTCTTTCTTTCTTTCTTTCTTT	C C	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG03710.hp2 NA19074.hp2 HG00642.hp2 HG03710.hp2 NA19074.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0021 a0001c0001t0001g0061 a0001c0001t0001g0074 a0001c0001t0001g0021 a0001c0001t0001g0061 a0001c0001t0001g0074	3	314	0.0096	-32	c.112 others(49): Show c.112+4815_112+4846delATTCCTTTCTTTCTTTCTTTCTTTCTTT CTTT	LY96	ENSG00000154589.7	transcript	ENST00000284818.7	protein_coding	1/4			chr8	TogoVar
LY96_chr8_73986392_74034079	73996372	CCTTTCTT others(25): Show CCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT	C C	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG04115.hp2 HG03453.hp2 HG04115.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0010 a0001c0001t0001g0062 a0001c0001t0001g0010 a0001c0001t0001g0062	2	314	0.0064	-32	c.112 others(49): Show c.112+4855_112+4886delCTTTCTTTCTTTCTTTCTTTCTTTCTTT CTTT	LY96	ENSG00000154589.7	transcript	ENST00000284818.7	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr8	TogoVar
LY96_chr8_73986392_74034079	74001988	CTCCCTCC others(25): Show CTCCCTCCTTTCTTCCTTTCTTCCTTCCTTCCT	C C	intron_variant intron_variant	MODIFIER	HG01515.hp1 HG02602.hp2 NA20752.hp2 HG01515.hp1 HG02602.hp2 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0282 a0001c0001t0001g0291 a0001c0001t0001g0299 a0001c0001t0001g0282 a0001c0001t0001g0291 a0001c0001t0001g0299	3	314	0.0096	-32	c.113 others(49): Show c.113-2804_113-2773delCTCCTTTCTTCCTTTCTTCCTTCCTTCC TTCC	LY96	ENSG00000154589.7	transcript	ENST00000284818.7	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr8	TogoVar
LY96_chr8_73986392_74034079	74002006	TCTTCCTT others(25): Show TCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC	T T	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG02451.hp2 HG00438.hp2 HG02451.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0022 a0001c0001t0001g0234 a0001c0001t0001g0022 a0001c0001t0001g0234	2	314	0.0064	-32	c.113 others(49): Show c.113-2750_113-2719delCCTTCCTTCCTTCCTTCCTTCCTTCCTT CCTT	LY96	ENSG00000154589.7	transcript	ENST00000284818.7	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr8	TogoVar
LY96_chr8_73986392_74034079	74002046	CCTTCCTT others(25): Show CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTT	C C	intron_variant intron_variant	MODIFIER	HG02523.hp2 HG02523.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0199 a0001c0001t0001g0199	1	314	0.0032	-32	c.113 others(49): Show c.113-2746_113-2715delCCTTCCTTCCTTCCTTCCTTCCTTCCTT TCTT	LY96	ENSG00000154589.7	transcript	ENST00000284818.7	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr8	TogoVar
LY96_chr8_73986392_74034079	74002058	CCTTCCTT others(25): Show CCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTT	C C	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG01891.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0106 a0001c0001t0001g0106	1	314	0.0032	-32	c.113 others(49): Show c.113-2734_113-2703delCCTTCCTTCCTTCCTTTCTTTCTTTCTT TCTT	LY96	ENSG00000154589.7	transcript	ENST00000284818.7	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr8	TogoVar
LYN_chr8_55874835_56019169	55908998	TATATATA others(25): Show TATATATATATATACACACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01884.hp1 HG01891.hp1 others(14): Show HG01243.hp2 HG01884.hp1 HG01891.hp1 HG02055.hp2 HG02145.hp1 HG02257.hp1 HG02258.hp2 HG02451.hp2 HG02647.hp2 HG02717.hp1 HG02895.hp1 HG02895.hp2 HG02897.hp2 HG02970.hp2 HG03225.hp1 HG03225.hp2 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0007 a0001c0001t0035 a0001c0002t0001 others(3): Show a0001c0001t0007 a0001c0001t0035 a0001c0002t0001 a0001c0002t0014 a0001c0003t0005 a0001c0003t0050	a0001c0001t0007g0010 a0001c0001t0007g0055 a0001c0001t0007g0057 others(14): Show a0001c0001t0007g0010 a0001c0001t0007g0055 a0001c0001t0007g0057 a0001c0001t0007g0059 a0001c0001t0035g0058 a0001c0002t0001g0056 a0001c0002t0001g0076 a0001c0002t0014g0160 a0001c0003t0005g0017 a0001c0003t0005g0063 a0001c0003t0005g0086 a0001c0003t0005g0087 a0001c0003t0005g0088 a0001c0003t0005g0089 a0001c0003t0005g0090 a0001c0003t0005g0094 a0001c0003t0050g0277	17	288	0.0590	-32	c.-6+ others(49): Show c.-6+28897_-6+28928delTATATATATATACACACACACACACACA CACA	LYN	ENSG00000254087.8	transcript	ENST00000519728.6	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr8	TogoVar
LYZL2_chr10_30606779_30634753	30611570	GGAAAGAA others(25): Show GGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01123.hp1 HG02622.hp2 HG02886.hp1 others(1): Show HG01123.hp1 HG02622.hp2 HG02886.hp1 NA18522.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0060 a0001c0001t0001g0174 a0001c0001t0001g0175 others(1): Show a0001c0001t0001g0060 a0001c0001t0001g0174 a0001c0001t0001g0175 a0001c0001t0001g0242	4	456	0.0088	-32	c.35 others(41): Show c.353_*384delTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	LYZL2	ENSG00000151033.10	transcript	ENST00000647634.2	protein_coding		208		chr10	TogoVar
LZTR1_chr22_20977297_21004032	20998264	TCACATTG others(25): Show TCACATTGGGAAGGGCTGTGAAGGCCTCCAGGC	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00280.hp1 HG00280.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0029 a0001c0001t0029	a0001c0001t0029g0333 a0001c0001t0029g0333	1	446	0.0022	-32	c.91 others(41): Show c.917_*948delCACATTGGGAAGGGCTGTGAAGGCCTCCAGGC	LZTR1	ENSG00000099949.22	transcript	ENST00000646124.2	protein_coding	21/21	917		chr22	TogoVar
MACROD2_chr20_13990516_16058197	15088397	TTATATAT others(25): Show TTATATATATATATATATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG01168.hp2 HG01168.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0007 a0002c0002t0007	a0002c0002t0007g0013 a0002c0002t0007g0013	1	24	0.0417	-32	c.419 others(53): Show c.419-141520_419-141489delTATATATATATATATATATATATA TATATATA	MACROD2	ENSG00000172264.19	transcript	ENST00000684519.1	protein_coding	5/17		INFO_REALIGN_3_PRIME	chr20	TogoVar
MACROD2_chr20_13990516_16058197	15777494	TTTCCTTC others(25): Show TTTCCTTCCTTCCTTCTTTCCTTCCTTCCTTCC	T T	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0003 a0001c0001t0005g0003	1	24	0.0417	-32	c.646 others(51): Show c.646-85235_646-85204delTTTCCTTCCTTCCTTCCTTCCTTCCT TCCTTC	MACROD2	ENSG00000172264.19	transcript	ENST00000684519.1	protein_coding	8/17		INFO_REALIGN_3_PRIME	chr20	TogoVar
MACROD2_chr20_13990516_16058197	15777510	TTTCCTTC others(25): Show TTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	T T	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02257.hp2 HG02559.hp1 others(2): Show HG02257.hp1 HG02257.hp2 HG02559.hp1 HG02976.hp1 HG03041.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0004 a0002c0002t0001 others(1): Show a0001c0001t0001 a0001c0001t0004 a0002c0002t0001 a0002c0002t0002	a0001c0001t0001g0004 a0001c0001t0001g0021 a0001c0001t0004g0008 others(2): Show a0001c0001t0001g0004 a0001c0001t0001g0021 a0001c0001t0004g0008 a0002c0002t0001g0017 a0002c0002t0002g0010	5	24	0.2083	-32	c.646 others(51): Show c.646-85199_646-85168delCTTCCTTCCTTCCTTCCTTCCTTCCT TCCTTC	MACROD2	ENSG00000172264.19	transcript	ENST00000684519.1	protein_coding	8/17		INFO_REALIGN_3_PRIME	chr20	TogoVar
MACROH2A1_chr5_135329381_135404231	135393354	GAAATGTA others(25): Show GAAATGTACTCTGGCTATTTACTCAGAAGAAAA	G G	intron_variant intron_variant	MODIFIER	NA18995.hp1 NA18995.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0147 a0001c0001t0001g0147	1	220	0.0046	-32	c.-33 others(49): Show c.-33-4260_-33-4229delTTTTCTTCTGAGTAAATAGCCAGAGTAC ATTT	MACROH2A1	ENSG00000113648.17	transcript	ENST00000511689.6	protein_coding	1/8			chr5	TogoVar
MACROH2A2_chr10_70047846_70117282	70051549	GATATATG others(25): Show GATATATGCGTGATTTGGAGGAAGTCAGAGAGA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18987.hp2 NA18987.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0115 a0001c0001t0002g0115	1	372	0.0027	-32	c.-15 others(43): Show c.-1510_-1479delATATATGCGTGATTTGGAGGAAGTCAGAGAGA	MACROH2A2	ENSG00000099284.15	transcript	ENST00000373255.9	protein_coding		1296		chr10	TogoVar
MAD1L1_chr7_1810795_2237945	1923454	CCCTGGCA others(25): Show CCCTGGCACCCCCGCGCTCTTCCGCCCCGGCAG	C C	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00642.hp1 HG00735.hp2 others(16): Show HG00639.hp1 HG00642.hp1 HG00735.hp2 HG01069.hp1 HG01099.hp2 HG01884.hp2 HG01975.hp2 HG02257.hp2 HG02293.hp1 HG02300.hp1 HG02523.hp1 HG02895.hp1 HG02897.hp1 HG03225.hp2 HG03831.hp1 HG03927.hp1 HG04115.hp1 HG04199.hp2 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0004t0001 a0001c0004t0003 a0001c0001t0001 a0001c0004t0001 a0001c0004t0003	a0001c0001t0001g0082 a0001c0001t0001g0146 a0001c0001t0001g0147 others(16): Show a0001c0001t0001g0082 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0250 a0001c0004t0001g0092 a0001c0004t0001g0093 a0001c0004t0001g0094 a0001c0004t0001g0097 a0001c0004t0001g0098 a0001c0004t0001g0099 a0001c0004t0001g0100 a0001c0004t0001g0205 a0001c0004t0003g0116 a0001c0004t0003g0117 a0001c0004t0003g0118 a0001c0004t0003g0119 a0001c0004t0003g0180	19	264	0.0720	-32	c.180 others(53): Show c.1807+13201_1807+13232delCTGCCGGGGCGGAAGAGCGCGGGG GTGCCAGG	MAD1L1	ENSG00000002822.16	transcript	ENST00000265854.12	protein_coding	17/18			chr7	TogoVar
MADCAM1_chr19_491486_510343	492066	CCCCCCTC others(25): Show CCCCCCTCCCCTGGGAGGAGACAGCCCCAGGCA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00408.hp2 HG02015.hp2 HG02165.hp1 others(12): Show HG00408.hp2 HG02015.hp2 HG02165.hp1 HG02165.hp2 HG03239.hp1 HG03239.hp2 HG03490.hp1 HG03492.hp1 NA18946.hp2 NA18960.hp1 NA18969.hp1 NA18970.hp2 NA18983.hp1 NA19003.hp2 NA19074.hp1	a0001 a0004 a0005 others(1): Show a0001 a0004 a0005 a0007	a0001c0001 a0004c0003 a0005c0015 others(2): Show a0001c0001 a0004c0003 a0005c0015 a0007c0009 a0007c0045	a0001c0001t0002 a0004c0003t0001 a0005c0015t0001 others(3): Show a0001c0001t0002 a0004c0003t0001 a0005c0015t0001 a0007c0009t0001 a0007c0009t0002 a0007c0045t0001	a0001c0001t0002g0236 a0004c0003t0001g0252 a0005c0015t0001g0246 others(12): Show a0001c0001t0002g0236 a0004c0003t0001g0252 a0005c0015t0001g0246 a0007c0009t0001g0239 a0007c0009t0001g0242 a0007c0009t0001g0243 a0007c0009t0001g0244 a0007c0009t0001g0247 a0007c0009t0001g0248 a0007c0009t0001g0250 a0007c0009t0001g0254 a0007c0009t0001g0255 a0007c0009t0001g0256 a0007c0009t0002g0245 a0007c0045t0001g0249	15	364	0.0412	-32	c.-44 others(43): Show c.-4433_-4402delCCCCCTCCCCTGGGAGGAGACAGCCCCAGGCA	MADCAM1	ENSG00000099866.16	transcript	ENST00000215637.8	protein_coding		4419		chr19	TogoVar
MADCAM1_chr19_491486_510343	492196	CCCCGCCT others(25): Show CCCCGCCTCTCCCTGGGCGGAGCCAGCCCCAAG	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02056.hp2 HG02056.hp2	a0007 a0007	a0007c0009 a0007c0009	a0007c0009t0002 a0007c0009t0002	a0007c0009t0002g0253 a0007c0009t0002g0253	1	364	0.0028	-32	c.-43 others(43): Show c.-4303_-4272delCCCGCCTCTCCCTGGGCGGAGCCAGCCCCAAG	MADCAM1	ENSG00000099866.16	transcript	ENST00000215637.8	protein_coding		4289		chr19	TogoVar
MADCAM1_chr19_491486_510343	510174	CCATCCTG others(25): Show CCATCCTGGCTAACACGGTGAAACCCCGTCTCT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19059.hp1 NA19059.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0039 a0001c0001t0002g0039	1	364	0.0028	-32	c.52 others(43): Show c.5210_*5241delCATCCTGGCTAACACGGTGAAACCCCGTCTCT	MADCAM1	ENSG00000099866.16	transcript	ENST00000215637.8	protein_coding		4832		chr19	TogoVar
MAEA_chr4_1284891_1345137	1333775	TCACCCCC others(25): Show TCACCCCCATGCCCACTCCCGTGCCCATGTGCC	T T	intron_variant intron_variant	MODIFIER	NA18951.hp2 NA18951.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0132 a0001c0001t0001g0132	1	388	0.0026	-32	c.765 others(47): Show c.765+917_765+948delCATGCCCACTCCCGTGCCCATGTGCCCACC CC	MAEA	ENSG00000090316.16	transcript	ENST00000303400.9	protein_coding	6/8		INFO_REALIGN_3_PRIME	chr4	TogoVar
MAEA_chr4_1284891_1345137	1333975	TGTGCTCA others(25): Show TGTGCTCACCCCTGCACCCATCCCATGCCTACC	T T	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00621.hp2 HG01257.hp1 others(12): Show HG00408.hp2 HG00621.hp2 HG01257.hp1 HG02080.hp1 HG02135.hp2 HG02683.hp1 HG03490.hp2 HG04115.hp1 NA18947.hp2 NA18967.hp2 NA18989.hp2 NA19057.hp2 NA19077.hp2 NA19081.hp1 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0129 a0001c0001t0001g0153 a0001c0001t0001g0154 others(10): Show a0001c0001t0001g0129 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0002t0001g0001 a0001c0002t0001g0094 a0001c0002t0001g0098 a0001c0002t0001g0099 a0001c0002t0001g0113 a0001c0002t0001g0114 a0001c0002t0001g0115 a0001c0002t0001g0118 a0001c0002t0001g0168	15	388	0.0387	-32	c.765 others(49): Show c.765+1122_765+1153delTGCACCCATCCCATGCCTACCGTGCTCA CCCC	MAEA	ENSG00000090316.16	transcript	ENST00000303400.9	protein_coding	6/8		INFO_REALIGN_3_PRIME	chr4	TogoVar
MAEA_chr4_1284891_1345137	1334037	ACCATGTG others(25): Show ACCATGTGCTCACCCCTGCACCCACCCCCATGC	A A	intron_variant intron_variant	MODIFIER	HG02886.hp2 HG02886.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0005 a0001c0003t0005	a0001c0003t0005g0289 a0001c0003t0005g0289	1	388	0.0026	-32	c.765 others(49): Show c.765+1175_765+1206delATGTGCTCACCCCTGCACCCACCCCCAT GCCC	MAEA	ENSG00000090316.16	transcript	ENST00000303400.9	protein_coding	6/8		INFO_REALIGN_3_PRIME	chr4	TogoVar
MAEA_chr4_1284891_1345137	1334040	ATGTGCTC others(25): Show ATGTGCTCACCCCTGCACCCACCCCCATGCCCG	A A	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02896.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0373 a0001c0002t0001g0373	1	388	0.0026	-32	c.765 others(49): Show c.765+1196_765+1227delCCCCCATGCCCGTGTGCTCACCCCTGCA CCCA	MAEA	ENSG00000090316.16	transcript	ENST00000303400.9	protein_coding	6/8		INFO_REALIGN_3_PRIME	chr4	TogoVar

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