Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
OBP2A_chr9_135541126_135554969	135548993	CGGTCTGG others(25): Show CGGTCTGGGGCTCCGCGCTCTGGGCTGCGATGG	C C	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG01169.hp2 HG03927.hp2 HG01167.hp1 HG01169.hp2 HG03927.hp2	a0001 a0016 a0001 a0016	a0001c0001 a0016c0017 a0001c0001 a0016c0017	a0001c0001t0001 a0016c0017t0001 a0001c0001t0001 a0016c0017t0001	a0001c0001t0001g0029 a0016c0017t0001g0041 a0001c0001t0001g0029 a0016c0017t0001g0041	3	455	0.0066	-32	c.491 others(46): Show c.491-110_491-79delCGCGCTCTGGGCTGCGATGGGGTCTGGGGCT C	OBP2A	ENSG00000122136.14	transcript	ENST00000371776.6	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr9	TogoVar
OBP2A_chr9_135541126_135554969	135549203	TCTGGGCT others(25): Show TCTGGGCTGCGATGGGGTCTGGGGCTCTGAGCC	T T	intron_variant intron_variant	MODIFIER	NA19006.hp2 NA19006.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0107 a0001c0001t0001g0107	1	455	0.0022	-32	c.491 others(45): Show c.491-82_491-51delGCTCTGAGCCCTGGGCTGCGATGGGGTCTGGG	OBP2A	ENSG00000122136.14	transcript	ENST00000371776.6	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr9	TogoVar
OBP2B_chr9_133200279_133214250	133206029	GCCCATCG others(25): Show GCCCATCGCAGCCCAGAGCGCGGAGCCCCAGAC	G G	intron_variant intron_variant	MODIFIER	NA20905.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0042 a0001c0001t0001g0042	1	447	0.0022	-32	c.491 others(46): Show c.491-121_491-90delGTCTGGGGCTCCGCGCTCTGGGCTGCGATGG G	OBP2B	ENSG00000171102.16	transcript	ENST00000372034.8	protein_coding	5/6			chr9	TogoVar
OC90_chr8_132019216_132064382	132028551	AAAGAAAG others(25): Show AAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGG	A A	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG01884.hp1 HG02615.hp2 others(12): Show HG00609.hp1 HG01884.hp1 HG02615.hp2 HG02886.hp2 HG03041.hp1 HG03195.hp2 HG03927.hp1 HG03927.hp2 NA18951.hp2 NA18980.hp1 NA18985.hp2 NA18999.hp1 NA19002.hp2 NA19065.hp1 NA19240.hp1	a0001 a0008 a0001 a0008	a0001c0002 a0008c0016 a0001c0002 a0008c0016	a0001c0002t0001 a0001c0002t0002 a0008c0016t0002 a0001c0002t0001 a0001c0002t0002 a0008c0016t0002	a0001c0002t0001g0065 a0001c0002t0002g0010 a0001c0002t0002g0017 others(4): Show a0001c0002t0001g0065 a0001c0002t0002g0010 a0001c0002t0002g0017 a0001c0002t0002g0209 a0001c0002t0002g0210 a0001c0002t0002g0215 a0008c0016t0002g0208	15	408	0.0368	-32	c.113 others(49): Show c.1138+490_1138+521delCCTTCCTTCCTTCCTTCCTTTCTTTCTT TCTT	OC90	ENSG00000253117.5	transcript	ENST00000254627.4	protein_coding	13/13			chr8	TogoVar
OCA2_chr15_27749875_28104315	27870667	GGAAGGAA others(25): Show GGAAGGAAGGAAGGAAAGAAGGAAGGAAGGAAA	G G	intron_variant intron_variant	MODIFIER	HG01099.hp2 HG03453.hp1 HG01099.hp2 HG03453.hp1	a0006 a0011 a0006 a0011	a0006c0023 a0011c0022 a0006c0023 a0011c0022	a0006c0023t0001 a0011c0022t0001 a0006c0023t0001 a0011c0022t0001	a0006c0023t0001g0093 a0011c0022t0001g0102 a0006c0023t0001g0093 a0011c0022t0001g0102	2	110	0.0182	-32	c.224 others(49): Show c.2244+455_2244+486delTTTCCTTCCTTCCTTCTTTCCTTCCTTC CTTC	OCA2	ENSG00000104044.16	transcript	ENST00000354638.8	protein_coding	21/23			chr15	TogoVar
OCA2_chr15_27749875_28104315	27913892	AAAGCAAG others(25): Show AAAGCAAGCAAGCAAGCAAGCAAGCAAGCAAGC	A A	intron_variant intron_variant	MODIFIER	HG01943.hp1 HG01943.hp2 NA18946.hp2 others(1): Show HG01943.hp1 HG01943.hp2 NA18946.hp2 NA18950.hp2	a0001 a0003 a0001 a0003	a0001c0006 a0001c0035 a0003c0012 others(1): Show a0001c0006 a0001c0035 a0003c0012 a0003c0013	a0001c0006t0001 a0001c0035t0001 a0003c0012t0001 others(1): Show a0001c0006t0001 a0001c0035t0001 a0003c0012t0001 a0003c0013t0001	a0001c0006t0001g0052 a0001c0035t0001g0011 a0003c0012t0001g0028 others(1): Show a0001c0006t0001g0052 a0001c0035t0001g0011 a0003c0012t0001g0028 a0003c0013t0001g0070	4	110	0.0364	-32	c.207 others(53): Show c.2079+12203_2079+12234delGCTTGCTTGCTTGCTTGCTTGCTT GCTTGCTT	OCA2	ENSG00000104044.16	transcript	ENST00000354638.8	protein_coding	19/23			chr15	TogoVar
OCA2_chr15_27749875_28104315	28069395	TCCCCCTC others(25): Show TCCCCCTCCCCTTCCCCCTCCCCCTCCCCCTCC	T T	intron_variant intron_variant	MODIFIER	HG03490.hp1 HG03490.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0096 a0001c0003t0001g0096	1	110	0.0091	-32	c.227 others(51): Show c.227+12221_227+12252delGGAGGGGGAGGGGGAGGGGGAAGGGG AGGGGG	OCA2	ENSG00000104044.16	transcript	ENST00000354638.8	protein_coding	2/23			chr15	TogoVar
ODAD2_chr10_27807168_28004079	27859242	AAACATTG others(25): Show AAACATTGTTACTTAGTTTAAAAGATGCTTTGG	A A	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG02109.hp2 HG02976.hp2 others(1): Show HG00735.hp1 HG02109.hp2 HG02976.hp2 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0021 a0001c0001 a0001c0021	a0001c0001t0001 a0001c0001t0004 a0001c0021t0004 a0001c0001t0001 a0001c0001t0004 a0001c0021t0004	a0001c0001t0001g0301 a0001c0001t0004g0248 a0001c0001t0004g0249 others(1): Show a0001c0001t0001g0301 a0001c0001t0004g0248 a0001c0001t0004g0249 a0001c0021t0004g0192	4	304	0.0132	-32	c.302 others(51): Show c.3021+1351_3021+1382delCCAAAGCATCTTTTAAACTAAGTAAC AATGTT	ODAD2	ENSG00000169126.16	transcript	ENST00000305242.10	protein_coding	19/19			chr10	TogoVar
ODAD3_chr19_11415605_11440121	11424565	GTATATAT others(25): Show GTATATATGTGTATATATACCTATGTGTATAAA	G G	intron_variant intron_variant	MODIFIER	HG02970.hp2 HG02970.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0067 a0001c0001t0001g0067	1	398	0.0025	-32	c.964 others(47): Show c.964-568_964-537delTTTATACACATAGGTATATATACACATATA TA	ODAD3	ENSG00000198003.12	transcript	ENST00000356392.9	protein_coding	7/12			chr19	TogoVar
ODAD3_chr19_11415605_11440121	11424965	ATATATGT others(25): Show ATATATGTATATATGTGTATATGTACATATGTG	A A	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02572.hp1	a0005 a0005	a0005c0006 a0005c0006	a0005c0006t0001 a0005c0006t0001	a0005c0006t0001g0074 a0005c0006t0001g0074	1	398	0.0025	-32	c.964 others(47): Show c.964-968_964-937delCACATATGTACATATACACATATATACATA TA	ODAD3	ENSG00000198003.12	transcript	ENST00000356392.9	protein_coding	7/12			chr19	TogoVar
ODAD3_chr19_11415605_11440121	11425378	TGTGTATG others(25): Show TGTGTATGTACATATGTGTATATGTATATATAC	T T	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0365 a0002c0002t0003g0365	1	398	0.0025	-32	c.963 others(47): Show c.963+734_963+765delGTATATATACATATACACATATGTACATAC AC	ODAD3	ENSG00000198003.12	transcript	ENST00000356392.9	protein_coding	7/12			chr19	TogoVar
ODF2L_chr1_86341837_86401323	86400879	ATGGGGGC others(25): Show ATGGGGGCATATCCCTCATGAATGGTTTAGTAC	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03225.hp2 HG03225.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0225 a0001c0002t0001g0225	1	406	0.0025	-32	c.-49 others(43): Show c.-4938_-4907delGTACTAAACCATTCATGAGGGATATGCCCCCA	ODF2L	ENSG00000122417.16	transcript	ENST00000460698.7	protein_coding		4557		chr1	TogoVar
ODF2_chr9_128451006_128506292	128466998	AAAAAAAA others(25): Show AAAAAAAAAAAAAAAAAATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02074.hp1 HG02074.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0280 a0001c0001t0001g0280	1	346	0.0029	-32	c.499 others(49): Show c.499-2183_499-2152delAAAAAAAAAAAAAAAATATATATATATA TATA	ODF2	ENSG00000136811.17	transcript	ENST00000351030.8	protein_coding	4/20		INFO_REALIGN_3_PRIME	chr9	TogoVar
ODF3_chr11_191761_205258	191830	ACCCTAAC others(25): Show ACCCTAACCCTAACCCTAACCCTAACCCCTAAC	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00323.hp2 HG00408.hp1 HG00408.hp2 others(190): Show HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp2 HG00733.hp2 HG00735.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01099.hp1 HG01106.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01175.hp1 HG01175.hp2 HG01255.hp1 HG01256.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01346.hp1 HG01358.hp1 HG01496.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01934.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01993.hp2 HG02004.hp1 HG02015.hp1 HG02040.hp1 HG02040.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp2 HG02109.hp1 HG02145.hp2 HG02155.hp1 HG02155.hp2 HG02257.hp1 HG02258.hp1 HG02258.hp2 HG02273.hp2 HG02451.hp1 HG02523.hp1 HG02523.hp2 HG02572.hp1 HG02602.hp1 HG02602.hp2 HG02630.hp1 HG02647.hp1 HG02683.hp1 HG02683.hp2 HG02698.hp2 HG02717.hp1 HG02735.hp1 HG02738.hp1 HG02818.hp2 HG02886.hp2 HG02965.hp2 HG03017.hp2 HG03041.hp2 HG03453.hp2 HG03486.hp2 HG03490.hp1 HG03688.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp1 HG03942.hp1 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04228.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18939.hp1 NA18944.hp1 NA18945.hp1 NA18945.hp2 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18953.hp1 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18964.hp2 NA18965.hp1 NA18966.hp1 NA18967.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp2 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18977.hp2 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18981.hp2 NA18992.hp1 NA18992.hp2 NA18994.hp1 NA18994.hp2 NA18998.hp1 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19002.hp1 NA19003.hp2 NA19005.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp2 NA19043.hp1 NA19043.hp2 NA19054.hp1 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19060.hp1 NA19060.hp2 NA19062.hp2 NA19063.hp2 NA19065.hp1 NA19066.hp2 NA19068.hp1 NA19070.hp2 NA19075.hp1 NA19077.hp1 NA19079.hp1 NA19080.hp1 NA19080.hp2 NA19081.hp2 NA19082.hp1 NA19082.hp2 NA19084.hp1 NA19087.hp2 NA19088.hp2 NA19089.hp2 NA19090.hp1 NA19090.hp2 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA21309.hp1 NA21309.hp2	a0001 a0003 a0005 others(3): Show a0001 a0003 a0005 a0006 a0008 a0009	a0001c0001 a0001c0002 a0001c0005 others(5): Show a0001c0001 a0001c0002 a0001c0005 a0003c0004 a0005c0006 a0006c0010 a0008c0008 a0009c0009	a0001c0001t0001 a0001c0001t0007 a0001c0002t0001 others(7): Show a0001c0001t0001 a0001c0001t0007 a0001c0002t0001 a0001c0002t0006 a0001c0005t0001 a0003c0004t0001 a0005c0006t0001 a0006c0010t0001 a0008c0008t0001 a0009c0009t0001	a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0009 others(19): Show a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0009 a0001c0001t0001g0019 a0001c0001t0007g0001 a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0004 a0001c0002t0001g0010 a0001c0002t0001g0012 a0001c0002t0001g0013 a0001c0002t0001g0015 a0001c0002t0001g0017 a0001c0002t0001g0018 a0001c0002t0001g0022 a0001c0002t0006g0021 a0001c0005t0001g0004 a0003c0004t0001g0003 a0005c0006t0001g0009 a0006c0010t0001g0001 a0008c0008t0001g0002 a0009c0009t0001g0004	193	388	0.4974	-32	c.-52 others(43): Show c.-5224_-5193delCCCTAACCCTAACCCTAACCCTAACCCCTAAC	ODF3	ENSG00000177947.15	transcript	ENST00000325113.9	protein_coding		4930		chr11	TogoVar
OLA1_chr2_174067447_174253532	174163745	TATATATA others(25): Show TATATATATATATATATATATATATATATATAA	T T	intron_variant intron_variant	MODIFIER	HG04115.hp2 HG04115.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0217 a0001c0001t0004g0217	1	262	0.0038	-32	c.374 others(51): Show c.374-21777_374-21746delTTATATATATATATATATATATATAT ATATAT	OLA1	ENSG00000138430.16	transcript	ENST00000284719.8	protein_coding	4/10			chr2	TogoVar
OLFM1_chr9_135082668_135126180	135085129	ATGAGGAT others(25): Show ATGAGGATAGAGACGTGGCTGTTCTAACCTGTC	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18995.hp1 NA18995.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0311 a0001c0001t0001g0311	1	360	0.0028	-32	c.-28 others(43): Show c.-2860_-2829delTGAGGATAGAGACGTGGCTGTTCTAACCTGTC	OLFM1	ENSG00000130558.20	transcript	ENST00000371793.8	protein_coding		2538		chr9	TogoVar
OLFM1_chr9_135082668_135126180	135124473	GAGGAAGG others(25): Show GAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03654.hp1 HG03654.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0012	a0001c0001t0012g0065 a0001c0001t0012g0065	1	360	0.0028	-32	c.42 others(43): Show c.4296_*4327delAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA	OLFM1	ENSG00000130558.20	transcript	ENST00000371793.8	protein_coding		3294		chr9	TogoVar
OLFM1_chr9_135082668_135126180	135124503	GGAAGGAA others(25): Show GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01167.hp2 HG01346.hp2 HG01517.hp1 others(19): Show HG01167.hp2 HG01346.hp2 HG01517.hp1 HG01993.hp1 HG02004.hp1 HG02135.hp2 HG02155.hp2 HG02257.hp2 HG02602.hp2 HG03688.hp2 HG03831.hp2 HG04115.hp1 NA18968.hp1 NA18973.hp1 NA18975.hp2 NA18982.hp2 NA18984.hp1 NA18984.hp2 NA19000.hp2 NA19043.hp2 NA19055.hp2 NA19066.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0014 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0014 a0001c0001t0016 a0001c0002t0002	a0001c0001t0001g0043 a0001c0001t0001g0060 a0001c0001t0001g0087 others(19): Show a0001c0001t0001g0043 a0001c0001t0001g0060 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0091 a0001c0001t0001g0104 a0001c0001t0001g0114 a0001c0001t0001g0324 a0001c0001t0002g0167 a0001c0001t0002g0170 a0001c0001t0002g0174 a0001c0001t0002g0177 a0001c0001t0014g0300 a0001c0001t0016g0301 a0001c0002t0002g0039 a0001c0002t0002g0200 a0001c0002t0002g0201 a0001c0002t0002g0224 a0001c0002t0002g0228 a0001c0002t0002g0251 a0001c0002t0002g0263 a0001c0002t0002g0274	22	360	0.0611	-32	c.43 others(43): Show c.4326_*4357delGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAA	OLFM1	ENSG00000130558.20	transcript	ENST00000371793.8	protein_coding		3324		chr9	TogoVar
OLFM3_chr1_101797560_102001926	101995672	CAGTAATG others(25): Show CAGTAATGAAAGGAAACTTAATTTGTCTACACT	C C	intron_variant intron_variant	MODIFIER	HG02132.hp2 HG02132.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0305 a0001c0001t0004g0305	1	306	0.0033	-32	c.69+ others(47): Show c.69+1044_69+1075delAGTGTAGACAAATTAAGTTTCCTTTCATTA CT	OLFM3	ENSG00000118733.17	transcript	ENST00000370103.9	protein_coding	1/5			chr1	TogoVar
OOSP1_chr11_59933432_59962480	59946915	ATATCTAT others(25): Show ATATCTATCTATCTATCTATCTATCTATCTATC	A A	intron_variant intron_variant	MODIFIER	HG02818.hp1 HG02818.hp1	a0004 a0004	a0004c0003 a0004c0003	a0004c0003t0002 a0004c0003t0002	a0004c0003t0002g0293 a0004c0003t0002g0293	1	386	0.0026	-32	c.357 others(47): Show c.357-796_357-765delATCTATCTATCTATCTATCTATCTATCTAT CT	OOSP1	ENSG00000284873.1	transcript	ENST00000646685.1	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr11	TogoVar
OPCML_chr11_132409981_133537501	132535162	ACTCTAGC others(25): Show ACTCTAGCTACCAGAGTAAAAAGTGCATAAACT	A A	intron_variant intron_variant	MODIFIER	HG04115.hp1 HG04115.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0035 a0001c0001t0001g0035	1	68	0.0147	-32	c.380 others(49): Show c.380-6008_380-5977delAGTTTATGCACTTTTTACTCTGGTAGCT AGAG	OPCML	ENSG00000183715.15	transcript	ENST00000524381.6	protein_coding	3/7			chr11	TogoVar
OPCML_chr11_132409981_133537501	132558297	TCCCCTCC others(25): Show TCCCCTCCTCCTCTCCCCCTCCTCCCCTCTCCC	T T	intron_variant intron_variant	MODIFIER	HG02809.hp1 HG03225.hp2 HG03516.hp1 others(2): Show HG02809.hp1 HG03225.hp2 HG03516.hp1 HG04115.hp2 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0013 a0001c0001t0021 others(1): Show a0001c0001t0001 a0001c0001t0013 a0001c0001t0021 a0001c0001t0032	a0001c0001t0001g0001 a0001c0001t0001g0013 a0001c0001t0013g0041 others(2): Show a0001c0001t0001g0001 a0001c0001t0001g0013 a0001c0001t0013g0041 a0001c0001t0021g0036 a0001c0001t0032g0065	5	68	0.0735	-32	c.380 others(51): Show c.380-29143_380-29112delGGGAGAGGGGAGGAGGGGGAGAGGAG GAGGGG	OPCML	ENSG00000183715.15	transcript	ENST00000524381.6	protein_coding	3/7			chr11	TogoVar
OPCML_chr11_132409981_133537501	132716390	TTATCTAT others(25): Show TTATCTATCTATCTATCTGTCTGTCTATCTATC	T T	intron_variant intron_variant	MODIFIER	HG01071.hp2 HG01192.hp1 HG01258.hp1 others(8): Show HG01071.hp2 HG01192.hp1 HG01258.hp1 HG02615.hp2 HG02630.hp2 HG02647.hp2 HG02809.hp2 HG02965.hp2 HG03130.hp2 HG03209.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(7): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0009 a0001c0001t0010 a0001c0001t0012 a0001c0001t0016 a0001c0001t0029	a0001c0001t0001g0028 a0001c0001t0002g0022 a0001c0001t0002g0032 others(8): Show a0001c0001t0001g0028 a0001c0001t0002g0022 a0001c0001t0002g0032 a0001c0001t0004g0007 a0001c0001t0005g0025 a0001c0001t0006g0005 a0001c0001t0009g0064 a0001c0001t0010g0066 a0001c0001t0012g0063 a0001c0001t0016g0012 a0001c0001t0029g0058	11	68	0.1618	-32	c.147 others(51): Show c.147-59103_147-59072delGATAGATAGACAGACAGATAGATAGA TAGATA	OPCML	ENSG00000183715.15	transcript	ENST00000524381.6	protein_coding	2/7			chr11	TogoVar
OPCML_chr11_132409981_133537501	132975529	CAAAAAAA others(25): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02451.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0044 a0001c0001t0003g0044	1	68	0.0147	-32	c.62- others(49): Show c.62-32551_62-32520delTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTTT	OPCML	ENSG00000183715.15	transcript	ENST00000524381.6	protein_coding	1/7			chr11	TogoVar
OPCML_chr11_132409981_133537501	133458243	TACACATA others(25): Show TACACATATATATACACGTGTGTGTATATATAC	T T	intron_variant intron_variant	MODIFIER	NA20129.hp1 NA20905.hp1 NA20129.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0002 a0001c0001t0002g0026 a0001c0001t0002g0002 a0001c0001t0002g0026	2	68	0.0294	-32	c.61+ others(49): Show c.61+73989_61+74020delGTATATATACACACACGTGTATATATAT GTGT	OPCML	ENSG00000183715.15	transcript	ENST00000524381.6	protein_coding	1/7			chr11	TogoVar
OPHN1_chrX_68037344_68438495	68037920	GGGAAGGA others(25): Show GGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01167.hp1 HG01169.hp1 HG02559.hp2 others(2): Show HG01167.hp1 HG01169.hp1 HG02559.hp2 HG02647.hp1 HG02886.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0006 a0001c0001t0002 a0001c0001t0006	a0001c0001t0002g0134 a0001c0001t0006g0105 a0001c0001t0006g0106 others(2): Show a0001c0001t0002g0134 a0001c0001t0006g0105 a0001c0001t0006g0106 a0001c0001t0006g0120 a0001c0001t0006g0121	5	155	0.0323	-32	c.92 others(43): Show c.9220_*9251delTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	OPHN1	ENSG00000079482.14	transcript	ENST00000355520.6	protein_coding		4423		chrX	TogoVar
OPRD1_chr1_28807170_28876267	28874273	AAAATAAA others(25): Show AAAATAAATAAATAAATAAATAAATAAATAAAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01070.hp2 HG01070.hp2	a0003 a0003	a0003c0008 a0003c0008	a0003c0008t0047 a0003c0008t0047	a0003c0008t0047g0031 a0003c0008t0047g0031	1	304	0.0033	-32	c.10 others(45): Show c.10991_*11022delAAATAAATAAATAAATAAATAAATAAATAAAT	OPRD1	ENSG00000116329.12	transcript	ENST00000234961.7	protein_coding		3007		chr1	TogoVar
OPTN_chr10_13095163_13143308	13114914	AATAGATA others(25): Show AATAGATATATCTATATTTATATATATTTATAT	A A	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00544.hp1 HG00609.hp1 others(105): Show HG00280.hp2 HG00544.hp1 HG00609.hp1 HG00609.hp2 HG01069.hp2 HG01081.hp1 HG01106.hp2 HG01109.hp2 HG01175.hp2 HG01192.hp2 HG01255.hp1 HG01358.hp2 HG01516.hp2 HG01884.hp1 HG01891.hp1 HG01891.hp2 HG01952.hp2 HG01975.hp1 HG01981.hp2 HG01993.hp1 HG02004.hp2 HG02015.hp2 HG02040.hp2 HG02055.hp1 HG02074.hp1 HG02080.hp1 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02165.hp1 HG02258.hp2 HG02273.hp2 HG02293.hp2 HG02523.hp1 HG02615.hp1 HG02647.hp1 HG02647.hp2 HG02809.hp1 HG02886.hp2 HG02896.hp1 HG02897.hp2 HG02922.hp2 HG02965.hp2 HG03098.hp1 HG03098.hp2 HG03195.hp2 HG03209.hp1 HG03453.hp2 HG03516.hp2 HG03579.hp1 HG03654.hp1 HG03669.hp1 HG03704.hp2 HG03710.hp2 HG03834.hp1 HG04115.hp1 HG04199.hp2 HG04204.hp2 HG04228.hp1 NA18522.hp2 NA18612.hp2 NA18747.hp2 NA18906.hp1 NA18942.hp1 NA18946.hp1 NA18946.hp2 NA18949.hp1 NA18951.hp2 NA18952.hp1 NA18956.hp1 NA18957.hp2 NA18960.hp2 NA18962.hp1 NA18963.hp2 NA18969.hp2 NA18970.hp1 NA18972.hp1 NA18973.hp1 NA18977.hp2 NA18979.hp1 NA18980.hp2 NA18988.hp2 NA18989.hp1 NA18990.hp1 NA18993.hp1 NA18995.hp1 NA18995.hp2 NA18998.hp2 NA18999.hp1 NA19000.hp1 NA19000.hp2 NA19001.hp2 NA19009.hp2 NA19012.hp1 NA19030.hp1 NA19030.hp2 NA19055.hp2 NA19057.hp1 NA19063.hp2 NA19067.hp2 NA19074.hp1 NA19077.hp2 NA19079.hp1 NA19081.hp1 NA19081.hp2 NA19084.hp2 NA19087.hp2 NA20905.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0006 others(2): Show a0001c0001 a0001c0002 a0001c0006 a0001c0012 a0002c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(12): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0012 a0001c0001t0013 a0001c0001t0014 a0001c0002t0001 a0001c0002t0004 a0001c0006t0006 a0001c0012t0001 a0002c0003t0001 a0002c0003t0002	a0001c0001t0001g0003 a0001c0001t0001g0011 a0001c0001t0001g0012 others(102): Show a0001c0001t0001g0003 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0028 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0061 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0068 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0101 a0001c0001t0001g0106 a0001c0001t0001g0112 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0197 a0001c0001t0001g0204 a0001c0001t0001g0208 a0001c0001t0001g0219 a0001c0001t0001g0277 a0001c0001t0001g0278 a0001c0001t0001g0279 a0001c0001t0001g0280 a0001c0001t0001g0281 a0001c0001t0001g0284 a0001c0001t0001g0285 a0001c0001t0001g0286 a0001c0001t0001g0299 a0001c0001t0001g0300 a0001c0001t0001g0301 a0001c0001t0001g0303 a0001c0001t0001g0309 a0001c0001t0001g0310 a0001c0001t0001g0311 a0001c0001t0001g0312 a0001c0001t0001g0313 a0001c0001t0001g0314 a0001c0001t0001g0315 a0001c0001t0001g0316 a0001c0001t0001g0317 a0001c0001t0001g0318 a0001c0001t0001g0319 a0001c0001t0001g0320 a0001c0001t0001g0321 a0001c0001t0001g0325 a0001c0001t0001g0327 a0001c0001t0001g0333 a0001c0001t0001g0346 a0001c0001t0001g0351 a0001c0001t0001g0352 a0001c0001t0001g0354 a0001c0001t0001g0360 a0001c0001t0001g0362 a0001c0001t0001g0364 a0001c0001t0001g0365 a0001c0001t0001g0366 a0001c0001t0001g0370 a0001c0001t0001g0386 a0001c0001t0001g0393 a0001c0001t0001g0394 a0001c0001t0001g0396 a0001c0001t0001g0400 a0001c0001t0002g0353 a0001c0001t0004g0223 a0001c0001t0005g0036 a0001c0001t0005g0037 a0001c0001t0005g0044 a0001c0001t0005g0045 a0001c0001t0006g0029 a0001c0001t0006g0030 a0001c0001t0007g0322 a0001c0001t0007g0323 a0001c0001t0012g0047 a0001c0001t0013g0073 a0001c0001t0014g0077 a0001c0002t0001g0160 a0001c0002t0004g0227 a0001c0002t0004g0228 a0001c0002t0004g0264 a0001c0006t0006g0093 a0001c0012t0001g0054 a0002c0003t0001g0018 a0002c0003t0001g0019 a0002c0003t0001g0020 a0002c0003t0001g0021 a0002c0003t0001g0123 a0002c0003t0001g0210 a0002c0003t0001g0397 a0002c0003t0001g0398 a0002c0003t0002g0016 a0002c0003t0002g0017 a0002c0003t0002g0025	108	418	0.2584	-32	c.553 others(49): Show c.553-1285_553-1254delGATATATCTATATTTATATATATTTATA TATA	OPTN	ENSG00000123240.17	transcript	ENST00000378747.8	protein_coding	5/14		INFO_REALIGN_3_PRIME	chr10	TogoVar
OR10A3_chr11_7932171_7946708	7933614	AAATTTAA others(25): Show AAATTTAAAGTAGTTTTTTCTAATTCTGTGAAG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0018 a0001c0001t0018	a0001c0001t0018g0022 a0001c0001t0018g0022	1	447	0.0022	-32	c.49 others(43): Show c.4930_*4961delCTTCACAGAATTAGAAAAAACTACTTTAAATT	OR10A3	ENSG00000170683.7	transcript	ENST00000642047.1	protein_coding		3556		chr11	TogoVar
OR10H1_chr19_15799549_15820664	15814468	TGTGTGTG others(25): Show TGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGA	T T	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00280.hp2 HG00639.hp2 others(32): Show HG00099.hp1 HG00280.hp2 HG00639.hp2 HG00733.hp1 HG00738.hp1 HG01069.hp1 HG01192.hp2 HG01361.hp1 HG01515.hp1 HG01891.hp2 HG01981.hp2 HG02109.hp1 HG02258.hp1 HG02572.hp2 HG02698.hp2 HG02717.hp1 HG02738.hp2 HG02809.hp1 HG02886.hp2 HG02970.hp2 HG02976.hp1 HG03139.hp2 HG03492.hp1 HG03516.hp1 HG03654.hp2 HG03688.hp1 HG03710.hp1 HG03942.hp1 HG04204.hp1 NA18522.hp1 NA19043.hp1 NA19043.hp2 NA19240.hp1 NA19240.hp2 NA20300.hp1	a0001 a0002 a0001 a0002	a0001c0004 a0002c0003 a0001c0004 a0002c0003	a0001c0004t0004 a0001c0004t0013 a0001c0004t0017 others(5): Show a0001c0004t0004 a0001c0004t0013 a0001c0004t0017 a0001c0004t0022 a0001c0004t0037 a0001c0004t0053 a0001c0004t0054 a0002c0003t0045	a0001c0004t0004g0002 a0001c0004t0004g0020 a0001c0004t0004g0049 others(13): Show a0001c0004t0004g0002 a0001c0004t0004g0020 a0001c0004t0004g0049 a0001c0004t0004g0111 a0001c0004t0004g0191 a0001c0004t0004g0194 a0001c0004t0004g0197 a0001c0004t0013g0026 a0001c0004t0013g0112 a0001c0004t0017g0196 a0001c0004t0022g0110 a0001c0004t0022g0192 a0001c0004t0037g0193 a0001c0004t0053g0248 a0001c0004t0054g0223 a0002c0003t0045g0195	35	398	0.0879	-32	c.-77 others(51): Show c.-778+1055_-778+1086delTCTCTCTCTCTCTCTCTCTCACACAC ACACAC	OR10H1	ENSG00000186723.4	transcript	ENST00000641419.1	protein_coding	1/3			chr19	TogoVar
OR10H1_chr19_15799549_15820664	15814470	TGTGTGTG others(25): Show TGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGA	T T	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG02809.hp2 HG02896.hp1 others(2): Show HG02717.hp2 HG02809.hp2 HG02896.hp1 HG03540.hp2 NA19030.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0004 a0001c0004t0046 a0001c0004t0004 a0001c0004t0046	a0001c0004t0004g0019 a0001c0004t0046g0190 a0001c0004t0004g0019 a0001c0004t0046g0190	5	398	0.0126	-32	c.-77 others(51): Show c.-778+1053_-778+1084delTCTCTCTCTCTCTCTCTCTCTCACAC ACACAC	OR10H1	ENSG00000186723.4	transcript	ENST00000641419.1	protein_coding	1/3			chr19	TogoVar
OR10H1_chr19_15799549_15820664	15814478	TGTGAGAG others(25): Show TGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA	T T	intron_variant intron_variant	MODIFIER	HG01175.hp1 HG01175.hp1	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0005 a0001c0005t0005	a0001c0005t0005g0125 a0001c0005t0005g0125	1	398	0.0025	-32	c.-77 others(51): Show c.-778+1045_-778+1076delTCTCTCTCTCTCTCTCTCTCTCTCTC TCTCAC	OR10H1	ENSG00000186723.4	transcript	ENST00000641419.1	protein_coding	1/3			chr19	TogoVar
OR10H1_chr19_15799549_15820664	15818506	ATTTTAGT others(25): Show ATTTTAGTAGTTTCATAGTTTGGGGTCTTAGAT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19010.hp2 NA19010.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0164 a0001c0001t0002g0164	1	398	0.0025	-32	c.-37 others(43): Show c.-3761_-3730delATCTAAGACCCCAAACTATGAAACTACTAAAA	OR10H1	ENSG00000186723.4	transcript	ENST00000641419.1	protein_coding		2843		chr19	TogoVar
OR10R2_chr1_158467220_158485936	158473770	TCCTTCCT others(25): Show TCCTTCCTCCCTCCTTCCCTCTTTCCCTCTCTG	T T	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG02055.hp1 HG02055.hp2 others(6): Show HG00741.hp2 HG02055.hp1 HG02055.hp2 HG02615.hp1 HG02809.hp2 HG03041.hp2 HG06807.hp1 NA19030.hp1 NA19043.hp2	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0002c0002 a0005c0010 a0001c0001 a0002c0002 a0005c0010	a0001c0001t0001 a0001c0001t0002 a0002c0002t0001 others(1): Show a0001c0001t0001 a0001c0001t0002 a0002c0002t0001 a0005c0010t0001	a0001c0001t0001g0030 a0001c0001t0001g0034 a0001c0001t0002g0059 others(4): Show a0001c0001t0001g0030 a0001c0001t0001g0034 a0001c0001t0002g0059 a0001c0001t0002g0060 a0002c0002t0001g0061 a0005c0010t0001g0068 a0005c0010t0001g0069	9	446	0.0202	-32	c.27+ others(47): Show c.27+1420_27+1451delCTTCCTCCCTCCTTCCCTCTTTCCCTCTCT GC	OR10R2	ENSG00000198965.5	transcript	ENST00000641067.1	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr1	TogoVar
OR11H4_chr14_20234286_20249349	20238184	TAATATAT others(25): Show TAATATATAAATTTATATATTTATATATAAATA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp2 HG00280.hp2 HG00733.hp1 others(5): Show HG00099.hp2 HG00280.hp2 HG00733.hp1 HG00735.hp1 HG01106.hp2 HG02135.hp2 HG02572.hp2 HG02809.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0032 a0001c0001t0001g0079 a0001c0001t0001g0254 others(4): Show a0001c0001t0001g0032 a0001c0001t0001g0079 a0001c0001t0001g0254 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0232	8	439	0.0182	-32	c.-11 others(43): Show c.-1158_-1127delAATATATAAATTTATATATTTATATATAAATA	OR11H4	ENSG00000176198.4	transcript	ENST00000641082.1	protein_coding		1101		chr14	TogoVar
OR14A16_chr1_247809660_247829119	247825532	GGGAAGTG others(25): Show GGGAAGTGCTGGCGGGCGGAAGTGCTGGCCGGC	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp2 HG00323.hp1 HG00323.hp2 others(216): Show HG00140.hp2 HG00323.hp1 HG00323.hp2 HG00423.hp1 HG00423.hp2 HG00544.hp1 HG00544.hp2 HG00597.hp1 HG00597.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01071.hp1 HG01081.hp1 HG01106.hp1 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01255.hp2 HG01256.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp2 HG01358.hp2 HG01361.hp2 HG01433.hp2 HG01496.hp2 HG01515.hp1 HG01515.hp2 HG01517.hp2 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01978.hp2 HG01981.hp1 HG01993.hp1 HG01993.hp2 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02056.hp1 HG02056.hp2 HG02080.hp1 HG02080.hp2 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02145.hp1 HG02148.hp1 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02273.hp1 HG02293.hp2 HG02300.hp2 HG02559.hp1 HG02602.hp1 HG02602.hp2 HG02622.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp2 HG02723.hp1 HG02809.hp1 HG02896.hp1 HG02965.hp2 HG02970.hp1 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp2 HG03195.hp1 HG03239.hp1 HG03239.hp2 HG03471.hp2 HG03490.hp1 HG03491.hp1 HG03491.hp2 HG03492.hp2 HG03540.hp2 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03704.hp1 HG03704.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03942.hp1 HG03942.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 NA18522.hp1 NA18612.hp1 NA18612.hp2 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18947.hp1 NA18947.hp2 NA18951.hp1 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18953.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18955.hp2 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18959.hp2 NA18962.hp1 NA18962.hp2 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18977.hp1 NA18977.hp2 NA18980.hp1 NA18980.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp2 NA18986.hp1 NA18986.hp2 NA18988.hp1 NA18988.hp2 NA18989.hp1 NA18989.hp2 NA18994.hp2 NA18998.hp1 NA18998.hp2 NA19000.hp1 NA19000.hp2 NA19002.hp1 NA19002.hp2 NA19004.hp1 NA19005.hp1 NA19005.hp2 NA19007.hp1 NA19007.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19054.hp1 NA19054.hp2 NA19056.hp1 NA19058.hp1 NA19058.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19075.hp1 NA19078.hp1 NA19078.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp2 NA19083.hp1 NA19083.hp2 NA19085.hp1 NA19085.hp2 NA19086.hp1 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20300.hp1 NA20752.hp1 NA20752.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0002c0002 others(1): Show a0001c0001 a0001c0003 a0002c0002 a0002c0004	a0001c0001t0001 a0001c0001t0004 a0001c0003t0001 others(2): Show a0001c0001t0001 a0001c0001t0004 a0001c0003t0001 a0002c0002t0003 a0002c0004t0001	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 others(30): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0008 a0001c0001t0001g0013 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0023 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0047 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0071 a0001c0001t0004g0063 a0001c0003t0001g0057 a0001c0003t0001g0064 a0001c0003t0001g0065 a0002c0002t0003g0010 a0002c0002t0003g0055 a0002c0004t0001g0056	219	342	0.6404	-32	c.-17 others(43): Show c.-1742_-1711delGCCGGCCAGCACTTCCGCCCGCCAGCACTTCC	OR14A16	ENSG00000196772.5	transcript	ENST00000641093.1	protein_coding		1414		chr1	TogoVar
OR1I1_chr19_15077211_15097970	15088773	GTAGATAG others(25): Show GTAGATAGATAGATAGATAGATAGATAGATAGA	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01256.hp1 HG01258.hp2 HG03688.hp2 HG01256.hp1 HG01258.hp2 HG03688.hp2	a0003 a0003	a0003c0002 a0003c0002	a0003c0002t0047 a0003c0002t0304 a0003c0002t0047 a0003c0002t0304	a0003c0002t0047g0070 a0003c0002t0304g0004 a0003c0002t0047g0070 a0003c0002t0304g0004	3	456	0.0066	-32	c.65 others(41): Show c.659_*690delGATAGATAGATAGATAGATAGATAGATAGATA	OR1I1	ENSG00000094661.3	transcript	ENST00000641398.1	protein_coding	2/2	659	INFO_REALIGN_3_PRIME	chr19	TogoVar
OR1L3_chr9_122670130_122681104	122678351	GAGCACTG others(25): Show GAGCACTGGTACATATAACAAGTGAATTTTCAC	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00544.hp2 HG00544.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0000 a0002c0002t0000	a0002c0002t0000g0000 a0002c0002t0000g0000	1	380	0.0026	-32	c.22 others(43): Show c.2248_*2279delAGCACTGGTACATATAACAAGTGAATTTTCAC	OR1L3	ENSG00000171481.5	transcript	ENST00000304820.5	protein_coding		2248		chr9	TogoVar
OR1R1P_chr17_3380930_3391874	3383950	GAATAAAT others(25): Show GAATAAATATTGTATACAAATATTTATTGAATA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00323.hp1 HG00639.hp2 HG00741.hp2 others(28): Show HG00323.hp1 HG00639.hp2 HG00741.hp2 HG01070.hp1 HG01175.hp1 HG01192.hp1 HG01346.hp2 HG01433.hp2 HG01891.hp1 HG02280.hp1 HG02451.hp1 HG02451.hp2 HG02559.hp1 HG02572.hp1 HG02717.hp2 HG02738.hp1 HG02818.hp2 HG02922.hp1 HG02970.hp2 HG03041.hp2 HG03453.hp1 HG03486.hp2 HG03540.hp1 HG03654.hp2 HG03704.hp2 HG03834.hp2 HG03942.hp1 NA18522.hp1 NA19240.hp1 NA20752.hp1 homoSapiens_chm13v2.hp1	a0003 a0008 a0003 a0008	a0003c0003 a0008c0016 a0003c0003 a0008c0016	a0003c0003t0000 a0008c0016t0000 a0003c0003t0000 a0008c0016t0000	a0003c0003t0000g0000 a0008c0016t0000g0000 a0003c0003t0000g0000 a0008c0016t0000g0000	31	416	0.0745	-32	c.-19 others(43): Show c.-1979_-1948delAATAAATATTGTATACAAATATTTATTGAATA	OR1R1P	ENSG00000180042.5	transcript	ENST00000572493.2	protein_coding		1979		chr17	TogoVar
OR2AG1_chr11_6778020_6796558	6779192	ATATATAT others(25): Show ATATATATATATATATATATATATATATTTTTT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02622.hp1 HG02622.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	1	468	0.0021	-32	c.-42 others(43): Show c.-4299_-4268delTATATATATATATATATATATATATATTTTTT	OR2AG1	ENSG00000279486.6	transcript	ENST00000641258.1	protein_coding		3827		chr11	TogoVar
OR2AG1_chr11_6778020_6796558	6779194	ATATATAT others(25): Show ATATATATATATATATATATATATATTTTTTTT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02809.hp1 HG02809.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	1	468	0.0021	-32	c.-42 others(43): Show c.-4297_-4266delTATATATATATATATATATATATATTTTTTTT	OR2AG1	ENSG00000279486.6	transcript	ENST00000641258.1	protein_coding		3825		chr11	TogoVar
OR2AG1_chr11_6778020_6796558	6779196	ATATATAT others(25): Show ATATATATATATATATATATATATTTTTTTTTT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18964.hp1 NA18976.hp2 NA19009.hp1 others(1): Show NA18964.hp1 NA18976.hp2 NA19009.hp1 NA19084.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0005 a0002c0002t0005	a0002c0002t0005g0002 a0002c0002t0005g0002	4	468	0.0086	-32	c.-42 others(43): Show c.-4295_-4264delTATATATATATATATATATATATTTTTTTTTT	OR2AG1	ENSG00000279486.6	transcript	ENST00000641258.1	protein_coding		3823		chr11	TogoVar
OR2AG1_chr11_6778020_6796558	6779198	ATATATAT others(25): Show ATATATATATATATATATATATTTTTTTTTTTT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp2 HG01358.hp2 HG01433.hp1 others(5): Show HG00099.hp2 HG01358.hp2 HG01433.hp1 HG02004.hp2 NA18747.hp1 NA18944.hp1 NA19010.hp2 NA19091.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0006 a0002c0002t0002 a0002c0002t0005 a0001c0001t0006 a0002c0002t0002 a0002c0002t0005	a0001c0001t0006g0004 a0002c0002t0002g0002 a0002c0002t0005g0002 a0001c0001t0006g0004 a0002c0002t0002g0002 a0002c0002t0005g0002	8	468	0.0171	-32	c.-42 others(43): Show c.-4293_-4262delTATATATATATATATATATATTTTTTTTTTTT	OR2AG1	ENSG00000279486.6	transcript	ENST00000641258.1	protein_coding		3821		chr11	TogoVar
OR2AG1_chr11_6778020_6796558	6779200	ATATATAT others(25): Show ATATATATATATATATATATTTTTTTTTTTTTT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01175.hp2 HG02257.hp1 HG02451.hp1 others(3): Show HG01175.hp2 HG02257.hp1 HG02451.hp1 HG03041.hp1 NA18522.hp1 NA19009.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0016 a0001c0001t0034 a0001c0001t0056 others(1): Show a0001c0001t0016 a0001c0001t0034 a0001c0001t0056 a0002c0002t0047	a0001c0001t0016g0001 a0001c0001t0034g0009 a0001c0001t0056g0001 others(1): Show a0001c0001t0016g0001 a0001c0001t0034g0009 a0001c0001t0056g0001 a0002c0002t0047g0002	6	468	0.0128	-32	c.-42 others(43): Show c.-4291_-4260delTATATATATATATATATATTTTTTTTTTTTTT	OR2AG1	ENSG00000279486.6	transcript	ENST00000641258.1	protein_coding		3819		chr11	TogoVar
OR2AG1_chr11_6778020_6796558	6779202	ATATATAT others(25): Show ATATATATATATATATATTTTTTTTTTTTTTTT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01516.hp1 HG01517.hp1 HG02258.hp1 others(5): Show HG01516.hp1 HG01517.hp1 HG02258.hp1 HG03041.hp2 HG03130.hp2 HG03209.hp2 HG03486.hp2 NA18967.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0003 a0001c0001t0016 a0001c0001t0035 others(1): Show a0001c0001t0003 a0001c0001t0016 a0001c0001t0035 a0002c0002t0028	a0001c0001t0003g0001 a0001c0001t0016g0001 a0001c0001t0035g0001 others(1): Show a0001c0001t0003g0001 a0001c0001t0016g0001 a0001c0001t0035g0001 a0002c0002t0028g0002	8	468	0.0171	-32	c.-42 others(43): Show c.-4289_-4258delTATATATATATATATATTTTTTTTTTTTTTTT	OR2AG1	ENSG00000279486.6	transcript	ENST00000641258.1	protein_coding		3817		chr11	TogoVar
OR2M3_chr1_248192265_248217925	248213421	ATATGTAT others(25): Show ATATGTATATATATATATGTATATATATATATG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02055.hp2 HG02145.hp2 HG02451.hp1 others(1): Show HG02055.hp2 HG02145.hp2 HG02451.hp1 HG02602.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0072 a0001c0001t0001 a0001c0001t0072	a0001c0001t0001g0001 a0001c0001t0072g0017 a0001c0001t0001g0001 a0001c0001t0072g0017	4	410	0.0098	-32	c.94 others(43): Show c.9416_*9447delTATGTATATATATATATGTATATATATATATG	OR2M3	ENSG00000228198.3	transcript	ENST00000641626.1	protein_coding		497		chr1	TogoVar
OR2M3_chr1_248192265_248217925	248213503	ATATTTAT others(25): Show ATATTTATATATATATATGTATATATATATATT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0055 a0001c0001t0055	a0001c0001t0055g0001 a0001c0001t0055g0001	1	410	0.0024	-32	c.94 others(43): Show c.9498_*9529delTATTTATATATATATATGTATATATATATATT	OR2M3	ENSG00000228198.3	transcript	ENST00000641626.1	protein_coding		579		chr1	TogoVar
OR2W1_chr6_29039213_29050175	29046217	ATGTAGGA others(25): Show ATGTAGGACATCTGGTGTTTACCCTTGGACGCC	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01993.hp1 HG01993.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0000 a0002c0002t0000	a0002c0002t0000g0000 a0002c0002t0000g0000	1	443	0.0023	-32	c.-10 others(43): Show c.-1074_-1043delGGCGTCCAAGGGTAAACACCAGATGTCCTACA	OR2W1	ENSG00000204704.3	transcript	ENST00000377175.2	protein_coding		1043		chr6	TogoVar
OR2Z1_chr19_8716634_8737160	8723980	GTGTGTGT others(25): Show GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTA	G G	intron_variant intron_variant	MODIFIER	HG03195.hp2 HG03195.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0059 a0001c0001t0001g0059	1	438	0.0023	-32	c.-17 others(49): Show c.-170+849_-170+880delTGTGTGTGTGTGTATGTGTGTGTGTGTG TGTG	OR2Z1	ENSG00000181733.4	transcript	ENST00000641125.1	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr19	TogoVar
OR3A2_chr17_3271177_3391308	3383950	GAATAAAT others(25): Show GAATAAATATTGTATACAAATATTTATTGAATA	G G	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00639.hp1 HG00738.hp1 others(29): Show HG00323.hp2 HG00639.hp1 HG00738.hp1 HG00741.hp2 HG01070.hp1 HG01175.hp2 HG01192.hp2 HG01346.hp2 HG01433.hp2 HG01517.hp1 HG01891.hp1 HG02280.hp2 HG02559.hp2 HG02572.hp2 HG02647.hp1 HG02717.hp2 HG02738.hp2 HG02818.hp2 HG02922.hp2 HG02970.hp1 HG03041.hp1 HG03453.hp1 HG03486.hp2 HG03540.hp1 HG03654.hp1 HG03704.hp1 HG03834.hp2 HG03942.hp1 NA18522.hp2 NA19240.hp1 NA20752.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0003 a0001c0001t0010 a0002c0002t0004 others(2): Show a0001c0001t0003 a0001c0001t0010 a0002c0002t0004 a0002c0002t0007 a0002c0002t0036	a0001c0001t0003g0312 a0001c0001t0010g0299 a0001c0001t0010g0300 others(29): Show a0001c0001t0003g0312 a0001c0001t0010g0299 a0001c0001t0010g0300 a0002c0002t0004g0284 a0002c0002t0004g0286 a0002c0002t0004g0287 a0002c0002t0004g0291 a0002c0002t0004g0295 a0002c0002t0004g0296 a0002c0002t0004g0297 a0002c0002t0004g0298 a0002c0002t0004g0301 a0002c0002t0004g0302 a0002c0002t0004g0303 a0002c0002t0004g0304 a0002c0002t0004g0305 a0002c0002t0004g0306 a0002c0002t0004g0307 a0002c0002t0004g0308 a0002c0002t0004g0309 a0002c0002t0004g0310 a0002c0002t0004g0311 a0002c0002t0004g0313 a0002c0002t0004g0314 a0002c0002t0007g0283 a0002c0002t0007g0285 a0002c0002t0007g0288 a0002c0002t0007g0289 a0002c0002t0007g0290 a0002c0002t0007g0292 a0002c0002t0007g0293 a0002c0002t0036g0294	32	318	0.1006	-32	c.-37 others(51): Show c.-377+2143_-377+2174delTATTCAATAAATATTTGTATACAATA TTTATT	OR3A2	ENSG00000221882.5	transcript	ENST00000573901.3	protein_coding	1/4			chr17	TogoVar

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