Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
LEFTY2_chr1_225931603_225946220	225935971	GCCACTGC others(26): Show GCCACTGCACTTCCGCCCAGGTGACAGTGCGAGA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18985.hp2 NA18985.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0050 a0001c0001t0001g0050	1	454	0.0022	-33	c.14 others(44): Show c.1437_*1469delTCTCGCACTGTCACCTGGGCGGAAGTGCAGTGG	LEFTY2	ENSG00000143768.13	transcript	ENST00000366820.10	protein_coding		631		chr1	TogoVar
LETM1_chr4_1806479_1861156	1823314	CGCTCGCC others(26): Show CGCTCGCCCGATGACTCCTGACATGTGGGAAGGA	C C	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG03579.hp2 NA18949.hp2 others(2): Show HG02723.hp1 HG03579.hp2 NA18949.hp2 NA18998.hp2 NA19000.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0009 a0002c0003t0022 a0002c0003t0023 others(2): Show a0002c0003t0009 a0002c0003t0022 a0002c0003t0023 a0002c0003t0024 a0002c0003t0026	a0002c0003t0009g0027 a0002c0003t0022g0184 a0002c0003t0023g0187 others(2): Show a0002c0003t0009g0027 a0002c0003t0022g0184 a0002c0003t0023g0187 a0002c0003t0024g0028 a0002c0003t0026g0186	5	200	0.0250	-33	c.133 others(50): Show c.1333-216_1333-184delTCCTTCCCACATGTCAGGAGTCATCGGG CGAGC	LETM1	ENSG00000168924.15	transcript	ENST00000302787.3	protein_coding	8/13			chr4	TogoVar
LGMN_chr14_92698809_92753627	92719239	ACCACCGC others(26): Show ACCACCGCCACCACCACCACCGCCACCGCCGCCG	A A	intron_variant intron_variant	MODIFIER	HG02735.hp2 HG02735.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0106 a0001c0001t0001g0106	1	420	0.0024	-33	c.139 others(48): Show c.139-428_139-396delCGGCGGCGGTGGCGGTGGTGGTGGTGGCGG TGG	LGMN	ENSG00000100600.15	transcript	ENST00000334869.9	protein_coding	2/13			chr14	TogoVar
LGR5_chr12_71434798_71591310	71564709	ATATATAC others(26): Show ATATATACATATATACATATATGTACACACACTG	A A	intron_variant intron_variant	MODIFIER	NA20805.hp2 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0046 a0001c0001t0001g0046	1	200	0.0050	-33	c.858 others(50): Show c.858-1688_858-1656delCATATATACATATATGTACACACACTGT ATATA	LGR5	ENSG00000139292.13	transcript	ENST00000266674.10	protein_coding	8/17		INFO_REALIGN_3_PRIME	chr12	TogoVar
LGR6_chr1_202188799_202324761	202321671	GATTTTGA others(26): Show GATTTTGACTGAATTTCTAGCAAGTCAGTATGTT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00280.hp1 HG00673.hp1 HG00733.hp2 others(19): Show HG00280.hp1 HG00673.hp1 HG00733.hp2 HG01081.hp1 HG01256.hp1 HG01361.hp1 HG02055.hp1 HG02074.hp1 HG02280.hp1 HG02451.hp1 HG02486.hp1 HG02615.hp2 HG02622.hp2 HG02809.hp2 HG03041.hp2 HG03688.hp2 HG03831.hp2 NA18961.hp2 NA18983.hp2 NA19064.hp2 NA20129.hp1 NA20300.hp1	a0001 a0003 a0012 a0001 a0003 a0012	a0001c0001 a0001c0028 a0001c0030 others(6): Show a0001c0001 a0001c0028 a0001c0030 a0001c0034 a0003c0004 a0003c0024 a0003c0025 a0003c0031 a0012c0027	a0001c0001t0001 a0001c0001t0004 a0001c0028t0004 others(8): Show a0001c0001t0001 a0001c0001t0004 a0001c0028t0004 a0001c0030t0001 a0001c0034t0004 a0003c0004t0001 a0003c0004t0004 a0003c0024t0004 a0003c0025t0004 a0003c0031t0001 a0012c0027t0001	a0001c0001t0001g0260 a0001c0001t0004g0055 a0001c0001t0004g0095 others(19): Show a0001c0001t0001g0260 a0001c0001t0004g0055 a0001c0001t0004g0095 a0001c0028t0004g0047 a0001c0030t0001g0228 a0001c0034t0004g0097 a0003c0004t0001g0110 a0003c0004t0001g0113 a0003c0004t0001g0148 a0003c0004t0001g0165 a0003c0004t0001g0173 a0003c0004t0001g0184 a0003c0004t0001g0203 a0003c0004t0001g0217 a0003c0004t0001g0221 a0003c0004t0001g0222 a0003c0004t0001g0224 a0003c0004t0004g0064 a0003c0024t0004g0022 a0003c0025t0004g0099 a0003c0031t0001g0137 a0012c0027t0001g0117	22	262	0.0840	-33	c.24 others(44): Show c.2465_*2497delATTTTGACTGAATTTCTAGCAAGTCAGTATGTT	LGR6	ENSG00000133067.18	transcript	ENST00000367278.8	protein_coding		1911		chr1	TogoVar
LHCGR_chr2_48681774_48760724	48699664	TAATGCAT others(26): Show TAATGCATGTTCTCTAATGCATTCTCTAATGCAG	T T	intron_variant intron_variant	MODIFIER	HG04115.hp1 HG04115.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0001 a0001c0006t0001	a0001c0006t0001g0151 a0001c0006t0001g0151	1	374	0.0027	-33	c.681 others(48): Show c.681-897_681-865delCTGCATTAGAGAATGCATTAGAGAACATGC ATT	LHCGR	ENSG00000138039.15	transcript	ENST00000294954.12	protein_coding	8/10			chr2	TogoVar
LHPP_chr10_124456823_124619141	124490942	ACCTAGAG others(26): Show ACCTAGAGTTCTGGAATCACAGGGTTCTGCACAG	A A	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG00735.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0181 a0001c0001t0001g0181	1	260	0.0039	-33	c.467 others(50): Show c.467+2402_467+2434delCTAGAGTTCTGGAATCACAGGGTTCTGC ACAGC	LHPP	ENSG00000107902.14	transcript	ENST00000368842.10	protein_coding	3/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LHPP_chr10_124456823_124619141	124610449	AGGGTGAG others(26): Show AGGGTGAGGGTGAGGGTGAGGGTGCTGATGGAGC	A A	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02258.hp1 HG02280.hp2 others(4): Show HG02257.hp2 HG02258.hp1 HG02280.hp2 HG02922.hp2 HG03139.hp1 HG03139.hp2 NA18522.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0001 a0001c0001t0015 a0003c0003t0002 a0001c0001t0001 a0001c0001t0015 a0003c0003t0002	a0001c0001t0001g0131 a0001c0001t0001g0137 a0001c0001t0001g0139 others(4): Show a0001c0001t0001g0131 a0001c0001t0001g0137 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0150 a0001c0001t0015g0195 a0003c0003t0002g0004	7	260	0.0269	-33	c.717 others(50): Show c.717-2797_717-2765delAGGGTGCTGATGGAGCGGGTGAGGGTGA GGGTG	LHPP	ENSG00000107902.14	transcript	ENST00000368842.10	protein_coding	6/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LHPP_chr10_124456823_124619141	124610935	AGGGTGAG others(26): Show AGGGTGAGGGTGCTGATGGAGCGGGTGAGGGTGC	A A	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0009 a0003c0003t0009	a0003c0003t0009g0257 a0003c0003t0009g0257	1	260	0.0039	-33	c.717 others(50): Show c.717-2314_717-2282delATGGAGCGGGTGAGGGTGCGGGTGAGGG TGCTG	LHPP	ENSG00000107902.14	transcript	ENST00000368842.10	protein_coding	6/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LILRA5_chr19_54302070_54318166	54303016	TGCTCTTG others(26): Show TGCTCTTGTTGTCCAGGCTGGAGTGCAATGGTGC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01071.hp2 HG01071.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0133 a0001c0001t0005g0133	1	409	0.0024	-33	c.43 others(44): Show c.4364_*4396delGCACCATTGCACTCCAGCCTGGACAACAAGAGC	LILRA5	ENSG00000187116.14	transcript	ENST00000432233.8	protein_coding		4053		chr19	TogoVar
LILRA6_chr19_54231590_54247790	54233440	ATAGAACC others(26): Show ATAGAACCCTCACAGGACCTCCATAGGATCTCAG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02165.hp2 HG02165.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0177 a0002c0002t0003g0177	1	450	0.0022	-33	c.54 others(44): Show c.5480_*5512delCTGAGATCCTATGGAGGTCCTGTGAGGGTTCTA	LILRA6	ENSG00000244482.11	transcript	ENST00000396365.7	protein_coding		3149		chr19	TogoVar
LILRA6_chr19_54231590_54247790	54233539	GTAGAACC others(26): Show GTAGAACCCCCACAGGACCTCCATAGGATCTCAA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18944.hp1 NA18998.hp1 NA18944.hp1 NA18998.hp1	a0001 a0038 a0001 a0038	a0001c0001 a0038c0078 a0001c0001 a0038c0078	a0001c0001t0035 a0038c0078t0019 a0001c0001t0035 a0038c0078t0019	a0001c0001t0035g0060 a0038c0078t0019g0157 a0001c0001t0035g0060 a0038c0078t0019g0157	2	450	0.0044	-33	c.53 others(44): Show c.5381_*5413delTTGAGATCCTATGGAGGTCCTGTGGGGGTTCTA	LILRA6	ENSG00000244482.11	transcript	ENST00000396365.7	protein_coding		3050		chr19	TogoVar
LILRA6_chr19_54231590_54247790	54233664	AATCTCAA others(26): Show AATCTCAATAGAACCCCCACAGGACCTCCATAGG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02273.hp1 NA19066.hp2 HG02273.hp1 NA19066.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0001 a0001c0001t0002g0075 a0001c0001t0001g0001 a0001c0001t0002g0075	2	450	0.0044	-33	c.52 others(44): Show c.5256_*5288delCCTATGGAGGTCCTGTGGGGGTTCTATTGAGAT	LILRA6	ENSG00000244482.11	transcript	ENST00000396365.7	protein_coding		2925		chr19	TogoVar
LIME1_chr20_63731664_63744103	63743978	CCTTTTTT others(26): Show CCTTTTTTTGTGTGTTTTGTTTTTGTTGACAGGT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18949.hp2 NA18949.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	394	0.0025	-33	c.50 others(44): Show c.5079_*5111delCTTTTTTTGTGTGTTTTGTTTTTGTTGACAGGT	LIME1	ENSG00000203896.10	transcript	ENST00000309546.8	protein_coding		4876		chr20	TogoVar
LIMS2_chr2_127633426_127680530	127668679	AAAAAAAA others(26): Show AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAC	A A	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02109.hp1	a0001 a0001	a0001c0010 a0001c0010	a0001c0010t0019 a0001c0010t0019	a0001c0010t0019g0140 a0001c0010t0019g0140	1	348	0.0029	-33	c.11+ others(48): Show c.11+6302_11+6334delGTTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTT	LIMS2	ENSG00000072163.20	transcript	ENST00000355119.9	protein_coding	1/9			chr2	TogoVar
LINGO2_chr9_27932617_29218601	28769496	ATATATAT others(26): Show ATATATATATATATATATATATATTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG02630.hp2 HG00639.hp1 HG02630.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0021 a0001c0001t0001 a0001c0001t0021	a0001c0001t0001g0046 a0001c0001t0021g0051 a0001c0001t0001g0046 a0001c0001t0021g0051	2	62	0.0323	-33	c.-39 others(54): Show c.-394-99249_-394-99217delAAAAAAAAAAATATATATATATAT ATATATATA	LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	2/6			chr9	TogoVar
LIPI_chr21_14103813_14215955	14106191	AAAAAAAA others(26): Show AAAAAAAAAAAAAAATATATATATATATATATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00597.hp1 HG02056.hp1 HG02155.hp1 others(8): Show HG00597.hp1 HG02056.hp1 HG02155.hp1 HG02165.hp1 HG02630.hp1 HG02895.hp1 HG03491.hp2 NA18953.hp2 NA19078.hp2 NA19090.hp2 NA19240.hp1	a0002 a0003 a0002 a0003	a0002c0002 a0003c0005 a0002c0002 a0003c0005	a0002c0002t0002 a0003c0005t0002 a0002c0002t0002 a0003c0005t0002	a0002c0002t0002g0035 a0002c0002t0002g0036 a0002c0002t0002g0078 others(8): Show a0002c0002t0002g0035 a0002c0002t0002g0036 a0002c0002t0002g0078 a0002c0002t0002g0081 a0002c0002t0002g0093 a0002c0002t0002g0111 a0002c0002t0002g0112 a0002c0002t0002g0208 a0002c0002t0002g0244 a0002c0002t0002g0252 a0003c0005t0002g0014	11	362	0.0304	-33	c.27 others(44): Show c.2769_*2801delATATATATATATATATATATTTTTTTTTTTTTT	LIPI	ENSG00000188992.12	transcript	ENST00000681601.1	protein_coding		2621		chr21	TogoVar
LIPI_chr21_14103813_14215955	14106193	AAAAAAAA others(26): Show AAAAAAAAAAAAATATATATATATATATATATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02129.hp2 NA18944.hp1 NA18974.hp2 others(3): Show HG02129.hp2 NA18944.hp1 NA18974.hp2 NA18978.hp2 NA18995.hp1 NA19058.hp2	a0002 a0003 a0002 a0003	a0002c0002 a0003c0005 a0003c0006 a0002c0002 a0003c0005 a0003c0006	a0002c0002t0002 a0003c0005t0002 a0003c0006t0002 a0002c0002t0002 a0003c0005t0002 a0003c0006t0002	a0002c0002t0002g0082 a0002c0002t0002g0096 a0002c0002t0002g0108 others(3): Show a0002c0002t0002g0082 a0002c0002t0002g0096 a0002c0002t0002g0108 a0002c0002t0002g0308 a0003c0005t0002g0013 a0003c0006t0002g0191	6	362	0.0166	-33	c.27 others(44): Show c.2767_*2799delATATATATATATATATATATATTTTTTTTTTTT	LIPI	ENSG00000188992.12	transcript	ENST00000681601.1	protein_coding		2619		chr21	TogoVar
LIPT1_chr2_99149967_99168137	99161272	AAAAAAAA others(26): Show AAAAAAAAAAAAAAAAAAAAATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01934.hp1 NA18975.hp2 HG01934.hp1 NA18975.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0053 a0001c0001t0001g0053	2	406	0.0049	-33	c.-1- others(46): Show c.-1-683_-1-651delAAAAAAAAAAAAAAAAAAATATATATATATAT A	LIPT1	ENSG00000144182.17	transcript	ENST00000651691.1	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr2	TogoVar
LIPT1_chr2_99149967_99168137	99161274	AAAAAAAA others(26): Show AAAAAAAAAAAAAAAAAAATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	NA19077.hp1 NA19077.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0145 a0001c0001t0001g0145	1	406	0.0025	-33	c.-1- others(46): Show c.-1-681_-1-649delAAAAAAAAAAAAAAAAATATATATATATATAT A	LIPT1	ENSG00000144182.17	transcript	ENST00000651691.1	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr2	TogoVar
LIPT1_chr2_99149967_99168137	99161280	AAAAAAAA others(26): Show AAAAAAAAAAAAATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02080.hp2 HG02080.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0234 a0001c0003t0001g0234	1	406	0.0025	-33	c.-1- others(46): Show c.-1-675_-1-643delAAAAAAAAAAATATATATATATATATATATAT A	LIPT1	ENSG00000144182.17	transcript	ENST00000651691.1	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr2	TogoVar
LMBR1L_chr12_49092139_49115847	49093324	GTGGGAGG others(26): Show GTGGGAGGATCCCTTGAGCTCAGGAGTTCAAGAC	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02129.hp2 HG02129.hp2	a0005 a0005	a0005c0008 a0005c0008	a0005c0008t0001 a0005c0008t0001	a0005c0008t0001g0066 a0005c0008t0001g0066	1	380	0.0026	-33	c.43 others(44): Show c.4315_*4347delGTCTTGAACTCCTGAGCTCAAGGGATCCTCCCA	LMBR1L	ENSG00000139636.16	transcript	ENST00000267102.13	protein_coding		3814		chr12	TogoVar
LMF1_chr16_848634_975984	876677	CGGACAGA others(26): Show CGGACAGAGGCAGGCTGGGTGGGCTGAGGACCTT	C C	intron_variant intron_variant	MODIFIER	NA18973.hp2 NA18973.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0017 a0001c0001t0017	a0001c0001t0017g0162 a0001c0001t0017g0162	1	294	0.0034	-33	c.897 others(50): Show c.897+2860_897+2892delAAGGTCCTCAGCCCACCCAGCCTGCCTC TGTCC	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	6/10			chr16	TogoVar
LMF1_chr16_848634_975984	944244	TGCCACTT others(26): Show TGCCACTTTCCACCAACCCTCAAAGACTCTACCC	T T	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02258.hp1	a0001 a0001	a0001c0022 a0001c0022	a0001c0022t0001 a0001c0022t0001	a0001c0022t0001g0268 a0001c0022t0001g0268	1	294	0.0034	-33	c.504 others(51): Show c.504-10023_504-9991delGGGTAGAGTCTTTGAGGGTTGGTGGAA AGTGGC	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	2/10			chr16	TogoVar
LMF1_chr16_848634_975984	949696	AACGACAG others(26): Show AACGACAGAGTCAGAGACAACGACAGAGTCAGAG	A A	intron_variant intron_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0124 a0001c0003t0001g0124	1	294	0.0034	-33	c.503 others(50): Show c.503+4628_503+4660delCTCTGACTCTGTCGTTGTCTCTGACTCT GTCGT	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	2/10			chr16	TogoVar
LMNB2_chr19_2423166_2461959	2431423	TGAGCCAC others(26): Show TGAGCCACGGCAGCCAGATGGAGCTCCCGTCGGG	T T	intron_variant intron_variant	MODIFIER	NA19063.hp1 NA19063.hp1	a0006 a0006	a0006c0009 a0006c0009	a0006c0009t0026 a0006c0009t0026	a0006c0009t0026g0271 a0006c0009t0026g0271	1	356	0.0028	-33	c.182 others(49): Show c.1821+92_1821+124delCCCGACGGGAGCTCCATCTGGCTGCCGTG GCTC	LMNB2	ENSG00000176619.13	transcript	ENST00000325327.4	protein_coding	11/11			chr19	TogoVar
LMO7_chr13_75631330_75864866	75701130	TTGTAGTG others(26): Show TTGTAGTGACCTTTTTGCTTCTGGAAGGTTGACA	T T	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00280.hp1 HG00280.hp2 others(139): Show HG00099.hp1 HG00280.hp1 HG00280.hp2 HG00438.hp1 HG00609.hp2 HG00621.hp1 HG00639.hp1 HG00639.hp2 HG00673.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG01070.hp1 HG01081.hp1 HG01099.hp2 HG01109.hp2 HG01123.hp2 HG01167.hp1 HG01169.hp1 HG01192.hp1 HG01243.hp2 HG01255.hp1 HG01256.hp2 HG01257.hp2 HG01261.hp1 HG01261.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp2 HG01515.hp2 HG01884.hp2 HG01891.hp2 HG01928.hp2 HG01952.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp2 HG02056.hp1 HG02074.hp1 HG02129.hp1 HG02132.hp2 HG02165.hp1 HG02258.hp2 HG02273.hp2 HG02280.hp1 HG02293.hp1 HG02451.hp1 HG02451.hp2 HG02523.hp1 HG02559.hp2 HG02647.hp1 HG02698.hp2 HG02723.hp2 HG02809.hp1 HG02818.hp1 HG02818.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02970.hp1 HG02970.hp2 HG03017.hp1 HG03041.hp1 HG03098.hp2 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03225.hp2 HG03486.hp2 HG03491.hp2 HG03492.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03669.hp1 HG03669.hp2 HG03704.hp1 HG03704.hp2 HG03927.hp1 HG04199.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18906.hp2 NA18940.hp1 NA18940.hp2 NA18941.hp1 NA18942.hp1 NA18944.hp1 NA18946.hp2 NA18951.hp1 NA18953.hp2 NA18954.hp1 NA18960.hp1 NA18965.hp1 NA18969.hp1 NA18969.hp2 NA18970.hp2 NA18979.hp2 NA18980.hp1 NA18983.hp2 NA18986.hp1 NA18987.hp1 NA18987.hp2 NA18990.hp2 NA18993.hp2 NA18998.hp1 NA18999.hp2 NA19001.hp1 NA19003.hp1 NA19005.hp1 NA19007.hp1 NA19007.hp2 NA19011.hp1 NA19012.hp1 NA19043.hp1 NA19043.hp2 NA19054.hp2 NA19055.hp1 NA19056.hp2 NA19057.hp2 NA19058.hp2 NA19063.hp2 NA19065.hp2 NA19070.hp1 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19082.hp1 NA19085.hp1 NA19091.hp1 NA20129.hp2 NA20300.hp2 NA20752.hp1 NA20905.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(17): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007 a0008 a0009 a0010 a0012 a0013 a0014 a0015 a0016 a0017 a0018 a0021 a0022 a0023	a0001c0001 a0001c0019 a0001c0020 others(21): Show a0001c0001 a0001c0019 a0001c0020 a0001c0021 a0002c0003 a0002c0007 a0003c0002 a0004c0004 a0005c0005 a0006c0006 a0007c0016 a0008c0008 a0009c0010 a0010c0012 a0012c0014 a0013c0018 a0014c0017 a0015c0029 a0016c0024 a0017c0023 a0018c0028 a0021c0026 a0022c0025 a0023c0022	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(44): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0008 a0001c0019t0002 a0001c0020t0002 a0001c0021t0001 a0002c0003t0001 a0002c0003t0002 a0002c0003t0005 a0002c0007t0001 a0002c0007t0003 a0002c0007t0004 a0003c0002t0001 a0003c0002t0002 a0004c0004t0001 a0004c0004t0002 a0004c0004t0004 a0004c0004t0006 a0004c0004t0010 a0005c0005t0001 a0005c0005t0003 a0005c0005t0004 a0005c0005t0015 a0006c0006t0001 a0007c0016t0001 a0008c0008t0002 a0008c0008t0003 a0008c0008t0004 a0009c0010t0001 a0009c0010t0002 a0009c0010t0003 a0009c0010t0017 a0010c0012t0001 a0010c0012t0002 a0012c0014t0001 a0012c0014t0007 a0012c0014t0014 a0013c0018t0004 a0014c0017t0002 a0015c0029t0001 a0016c0024t0002 a0017c0023t0002 a0018c0028t0004 a0021c0026t0001 a0022c0025t0003 a0023c0022t0001	a0001c0001t0001g0109 a0001c0001t0001g0113 a0001c0001t0001g0116 others(138): Show a0001c0001t0001g0109 a0001c0001t0001g0113 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0135 a0001c0001t0001g0143 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0159 a0001c0001t0001g0167 a0001c0001t0001g0184 a0001c0001t0002g0007 a0001c0001t0002g0008 a0001c0001t0002g0009 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0016 a0001c0001t0002g0017 a0001c0001t0002g0018 a0001c0001t0002g0020 a0001c0001t0002g0021 a0001c0001t0002g0022 a0001c0001t0002g0023 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0026 a0001c0001t0002g0029 a0001c0001t0002g0034 a0001c0001t0002g0035 a0001c0001t0002g0036 a0001c0001t0002g0039 a0001c0001t0002g0040 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0045 a0001c0001t0002g0047 a0001c0001t0002g0048 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0058 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0072 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0080 a0001c0001t0002g0082 a0001c0001t0002g0083 a0001c0001t0002g0085 a0001c0001t0002g0088 a0001c0001t0002g0099 a0001c0001t0002g0106 a0001c0001t0002g0107 a0001c0001t0002g0265 a0001c0001t0003g0153 a0001c0001t0008g0044 a0001c0019t0002g0267 a0001c0019t0002g0268 a0001c0020t0002g0269 a0001c0020t0002g0271 a0001c0021t0001g0182 a0002c0003t0001g0146 a0002c0003t0002g0134 a0002c0003t0005g0033 a0002c0007t0001g0129 a0002c0007t0003g0173 a0002c0007t0003g0176 a0002c0007t0003g0178 a0002c0007t0003g0180 a0002c0007t0003g0181 a0002c0007t0003g0246 a0002c0007t0004g0260 a0002c0007t0004g0261 a0003c0002t0001g0006 a0003c0002t0001g0123 a0003c0002t0001g0141 a0003c0002t0001g0157 a0003c0002t0001g0158 a0003c0002t0001g0179 a0003c0002t0002g0064 a0004c0004t0001g0148 a0004c0004t0001g0149 a0004c0004t0001g0199 a0004c0004t0002g0032 a0004c0004t0004g0081 a0004c0004t0006g0103 a0004c0004t0010g0119 a0005c0005t0001g0114 a0005c0005t0003g0112 a0005c0005t0003g0115 a0005c0005t0004g0263 a0005c0005t0004g0264 a0005c0005t0015g0171 a0006c0006t0001g0174 a0006c0006t0001g0175 a0006c0006t0001g0245 a0007c0016t0001g0001 a0007c0016t0001g0252 a0008c0008t0002g0077 a0008c0008t0003g0005 a0008c0008t0003g0110 a0008c0008t0003g0111 a0008c0008t0003g0160 a0008c0008t0003g0168 a0008c0008t0003g0169 a0008c0008t0004g0087 a0009c0010t0001g0248 a0009c0010t0001g0249 a0009c0010t0001g0250 a0009c0010t0002g0015 a0009c0010t0003g0244 a0009c0010t0017g0004 a0010c0012t0001g0140 a0010c0012t0001g0247 a0010c0012t0002g0105 a0012c0014t0001g0002 a0012c0014t0001g0003 a0012c0014t0007g0049 a0012c0014t0014g0185 a0013c0018t0004g0010 a0013c0018t0004g0011 a0013c0018t0004g0056 a0014c0017t0002g0027 a0014c0017t0002g0028 a0014c0017t0002g0037 a0015c0029t0001g0118 a0016c0024t0002g0086 a0017c0023t0002g0050 a0018c0028t0004g0133 a0021c0026t0001g0122 a0022c0025t0003g0177 a0023c0022t0001g0136	142	272	0.5221	-33	c.70- others(50): Show c.70-12018_70-11986delTGTAGTGACCTTTTTGCTTCTGGAAGGT TGACA	LMO7	ENSG00000136153.20	transcript	ENST00000377534.8	protein_coding	1/30		INFO_REALIGN_3_PRIME	chr13	TogoVar
LMOD1_chr1_201891456_201951548	201901510	AAATATAT others(26): Show AAATATATATATATATATATGTATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02735.hp1 HG02735.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0006 a0002c0002t0002g0006	1	400	0.0025	-33	c.262 others(48): Show c.262-792_262-760delATATATATATATACATATATATATATATAT ATT	LMOD1	ENSG00000163431.14	transcript	ENST00000367288.5	protein_coding	1/2			chr1	TogoVar
LMOD1_chr1_201891456_201951548	201901512	ATATATAT others(26): Show ATATATATATATATATATGTATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01361.hp2 HG02602.hp2 HG02735.hp2 others(6): Show HG01361.hp2 HG02602.hp2 HG02735.hp2 HG03654.hp1 HG04184.hp1 HG04199.hp1 HG04228.hp1 NA18968.hp2 NA18986.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0001 a0001c0001t0004	a0001c0001t0001g0142 a0001c0001t0001g0329 a0001c0001t0004g0365 others(6): Show a0001c0001t0001g0142 a0001c0001t0001g0329 a0001c0001t0004g0365 a0001c0001t0004g0370 a0001c0001t0004g0371 a0001c0001t0004g0372 a0001c0001t0004g0373 a0001c0001t0004g0374 a0001c0001t0004g0376	9	400	0.0225	-33	c.262 others(48): Show c.262-794_262-762delATATATATATATATACATATATATATATAT ATA	LMOD1	ENSG00000163431.14	transcript	ENST00000367288.5	protein_coding	1/2			chr1	TogoVar
LMTK3_chr19_48480271_48516835	48493452	CCAGGCCC others(26): Show CCAGGCCCCGCATCACTCCAGCTCGGCCTCCCTT	C C	intron_variant intron_variant	MODIFIER	HG04204.hp2 HG04204.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0182 a0002c0003t0001g0182	1	314	0.0032	-33	c.409 others(50): Show c.4092+209_4092+241delAAGGGAGGCCGAGCTGGAGTGATGCGGG GCCTG	LMTK3	ENSG00000142235.13	transcript	ENST00000600059.6	protein_coding	12/14			chr19	TogoVar
LMTK3_chr19_48480271_48516835	48493472	GCTCGGCC others(26): Show GCTCGGCCTCCCTTCAGGCCACGCCCCACTCTAA	G G	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02886.hp1 HG03041.hp2 others(5): Show HG01884.hp1 HG02886.hp1 HG03041.hp2 HG03209.hp1 HG03225.hp1 HG03453.hp1 HG03516.hp2 HG06807.hp1	a0000 a0001 a0002 a0000 a0001 a0002	a0000c0001 a0000c0004 a0001c0002 others(1): Show a0000c0001 a0000c0004 a0001c0002 a0002c0003	a0000c0001t0001 a0000c0004t0001 a0001c0002t0001 others(1): Show a0000c0001t0001 a0000c0004t0001 a0001c0002t0001 a0002c0003t0001	a0000c0001t0001g0006 a0000c0001t0001g0040 a0000c0001t0001g0041 others(4): Show a0000c0001t0001g0006 a0000c0001t0001g0040 a0000c0001t0001g0041 a0000c0004t0001g0039 a0001c0002t0001g0037 a0001c0002t0001g0042 a0002c0003t0001g0038	8	314	0.0255	-33	c.409 others(50): Show c.4092+189_4092+221delTTAGAGTGGGGCGTGGCCTGAAGGGAGG CCGAG	LMTK3	ENSG00000142235.13	transcript	ENST00000600059.6	protein_coding	12/14			chr19	TogoVar
LOC102725191_chr7_12499441_12546270	12544949	TAACTCAA others(26): Show TAACTCAATATATCAAGAATATTCTCAGCCAGGC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03710.hp1 NA19055.hp1 HG03710.hp1 NA19055.hp1	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0001 a0004c0004t0001	a0004c0004t0001g0008 a0004c0004t0001g0076 a0004c0004t0001g0008 a0004c0004t0001g0076	2	422	0.0047	-33	c.40 others(44): Show c.4027_*4059delAACTCAATATATCAAGAATATTCTCAGCCAGGC	LOC102725191	ENSG00000226690.9	transcript	ENST00000636804.2	protein_coding		3680		chr7	TogoVar
LOC127898563_chr6_68630890_68640967	68640884	CCTTAAAG others(26): Show CCTTAAAGATTTCTGCAGGTCAGTGTTTCACTAT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18972.hp2 NA18972.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0000 a0001c0001t0000	a0001c0001t0000g0000 a0001c0001t0000g0000	1	398	0.0025	-33	c.49 others(44): Show c.4918_*4950delCTTAAAGATTTCTGCAGGTCAGTGTTTCACTAT	LOC127898563	ENSG00000288712.1	transcript	ENST00000683102.1	protein_coding		4918		chr6	TogoVar
LOC728392_chr17_5494427_5506006	5502573	GAGCCACT others(26): Show GAGCCACTGCGCCAAGCCGGGTGGAAGTATATGA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18963.hp2 NA18963.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	430	0.0023	-33	c.-16 others(44): Show c.-1650_-1618delTCATATACTTCCACCCGGCTTGGCGCAGTGGCT	LOC728392	ENSG00000286190.2	transcript	ENST00000568641.2	protein_coding		1568		chr17	TogoVar
LPAR4_chrX_78742720_78763714	78753093	ACACCCTT others(26): Show ACACCCTTAGGTGATTAATTGTCAGAATAATTGG	A A	intron_variant intron_variant	MODIFIER	HG02273.hp1 HG02273.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0042 a0001c0001t0042	a0001c0001t0042g0033 a0001c0001t0042g0033	1	324	0.0031	-33	c.-79 others(50): Show c.-79-1697_-79-1665delCACCCTTAGGTGATTAATTGTCAGAATA ATTGG	LPAR4	ENSG00000147145.14	transcript	ENST00000614823.5	protein_coding	4/4			chrX	TogoVar
LPP_chr3_188149157_188895671	188755809	CAAAAAAA others(26): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA18522.hp2 NA18522.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0052 a0002c0003t0052	a0002c0003t0052g0014 a0002c0003t0052g0014	1	76	0.0132	-33	c.124 others(52): Show c.1241-4280_1241-4248delAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAA	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	8/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LPP_chr3_188149157_188895671	188784712	TATATATA others(26): Show TATATATATATTTCCATCATATATATATTCCATC	T T	intron_variant intron_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0004 a0004	a0004c0017 a0004c0017	a0004c0017t0044 a0004c0017t0044	a0004c0017t0044g0043 a0004c0017t0044g0043	1	76	0.0132	-33	c.141 others(54): Show c.1410+24442_1410+24474delTCCATCATATATATATTCCATCAT ATATATATT	LPP	ENSG00000145012.15	transcript	ENST00000617246.5	protein_coding	9/11		INFO_REALIGN_3_PRIME	chr3	TogoVar
LRBA_chr4_150259435_151020284	150489001	AATATATA others(26): Show AATATATAATATATTATATATAAGAATATATATT	A A	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02922.hp2 HG03139.hp1 others(4): Show HG02055.hp1 HG02922.hp2 HG03139.hp1 HG03209.hp1 NA18906.hp1 NA19240.hp2 NA20129.hp1	a0001 a0023 a0001 a0023	a0001c0001 a0001c0037 a0023c0041 a0001c0001 a0001c0037 a0023c0041	a0001c0001t0002 a0001c0037t0003 a0023c0041t0003 a0001c0001t0002 a0001c0037t0003 a0023c0041t0003	a0001c0001t0002g0170 a0001c0001t0002g0176 a0001c0001t0002g0177 others(4): Show a0001c0001t0002g0170 a0001c0001t0002g0176 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0179 a0001c0037t0003g0175 a0023c0041t0003g0173	7	180	0.0389	-33	c.644 others(52): Show c.6449-1200_6449-1168delAATATATATTCTTATATATAATATAT TATATAT	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	41/56			chr4	TogoVar
LRCH3_chr3_197786254_197893436	197892515	GATTCCTT others(26): Show GATTCCTTCCACTCCCTCCTCAGTGAGTGCCCTA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02109.hp2 HG02965.hp2 HG03130.hp1 others(7): Show HG02109.hp2 HG02965.hp2 HG03130.hp1 HG03195.hp2 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18963.hp1 NA19043.hp2 NA19084.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0004 a0001c0007 others(1): Show a0001c0001 a0001c0004 a0001c0007 a0003c0009	a0001c0001t0062 a0001c0004t0006 a0001c0007t0006 others(2): Show a0001c0001t0062 a0001c0004t0006 a0001c0007t0006 a0003c0009t0063 a0003c0009t0068	a0001c0001t0062g0085 a0001c0004t0006g0031 a0001c0004t0006g0073 others(7): Show a0001c0001t0062g0085 a0001c0004t0006g0031 a0001c0004t0006g0073 a0001c0004t0006g0080 a0001c0004t0006g0138 a0001c0004t0006g0268 a0001c0004t0006g0279 a0001c0007t0006g0161 a0003c0009t0063g0113 a0003c0009t0068g0164	10	292	0.0343	-33	c.88 others(44): Show c.8850_*8882delATTCCTTCCACTCCCTCCTCAGTGAGTGCCCTA	LRCH3	ENSG00000186001.14	transcript	ENST00000425562.7	protein_coding		4080		chr3	TogoVar
LRCH3_chr3_197786254_197893436	197892563	CTCCTCAG others(26): Show CTCCTCAGTGAGCACCCTAATTCCTTTCACTCTG	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00544.hp1 NA18941.hp2 NA18988.hp1 others(1): Show HG00544.hp1 NA18941.hp2 NA18988.hp1 NA19057.hp2	a0002 a0007 a0002 a0007	a0002c0003 a0002c0006 a0007c0015 a0002c0003 a0002c0006 a0007c0015	a0002c0003t0013 a0002c0003t0055 a0002c0006t0019 others(1): Show a0002c0003t0013 a0002c0003t0055 a0002c0006t0019 a0007c0015t0013	a0002c0003t0013g0241 a0002c0003t0055g0009 a0002c0006t0019g0262 others(1): Show a0002c0003t0013g0241 a0002c0003t0055g0009 a0002c0006t0019g0262 a0007c0015t0013g0273	4	292	0.0137	-33	c.88 others(44): Show c.8898_*8930delTCCTCAGTGAGCACCCTAATTCCTTTCACTCTG	LRCH3	ENSG00000186001.14	transcript	ENST00000425562.7	protein_coding		4128		chr3	TogoVar
LRMDA_chr10_75426624_76565168	75833415	ATTATCAG others(26): Show ATTATCAGTGATTGGAGCCTTTTCCTCCTTTGAT	A A	intron_variant intron_variant	MODIFIER	HG03098.hp2 HG03195.hp2 HG03098.hp2 HG03195.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0010 a0001c0001t0001 a0001c0001t0010	a0001c0001t0001g0031 a0001c0001t0010g0008 a0001c0001t0001g0031 a0001c0001t0010g0008	2	46	0.0435	-33	c.132 others(54): Show c.132-202592_132-202560delTTATCAGTGATTGGAGCCTTTTCC TCCTTTGAT	LRMDA	ENSG00000148655.16	transcript	ENST00000611255.5	protein_coding	2/6			chr10	TogoVar
LRMDA_chr10_75426624_76565168	76264406	CAAAAAAA others(26): Show CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA20300.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0014 a0001c0001t0004g0014	1	46	0.0217	-33	c.517 others(52): Show c.517-59976_517-59944delAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAA	LRMDA	ENSG00000148655.16	transcript	ENST00000611255.5	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRP1B_chr2_140226423_142136016	141463530	AATTATAT others(26): Show AATTATATATTATATATAATTATATATAATATAT	A A	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG01884.hp1 HG02630.hp1 others(5): Show HG01261.hp2 HG01884.hp1 HG02630.hp1 HG02723.hp2 HG02922.hp1 HG02965.hp2 HG03225.hp1 NA18522.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0002 a0001c0005 a0001c0010 others(5): Show a0001c0002 a0001c0005 a0001c0010 a0001c0025 a0001c0026 a0001c0028 a0002c0004 a0003c0021	a0001c0002t0010 a0001c0005t0008 a0001c0010t0011 others(5): Show a0001c0002t0010 a0001c0005t0008 a0001c0010t0011 a0001c0025t0005 a0001c0026t0001 a0001c0028t0002 a0002c0004t0004 a0003c0021t0001	a0001c0002t0010g0022 a0001c0005t0008g0010 a0001c0010t0011g0028 others(5): Show a0001c0002t0010g0022 a0001c0005t0008g0010 a0001c0010t0011g0028 a0001c0025t0005g0018 a0001c0026t0001g0025 a0001c0028t0002g0020 a0002c0004t0004g0006 a0003c0021t0001g0026	8	28	0.2857	-33	c.343 others(52): Show c.343+16833_343+16865delATATATTATATATAATTATATATAAT ATATAAT	LRP1B	ENSG00000168702.18	transcript	ENST00000389484.8	protein_coding	3/90			chr2	TogoVar
LRP2_chr2_169122109_169367534	169299067	GAAGGAAA others(26): Show GAAGGAAAGAAAGAAAGAAGGAAAGAAAGAAAGA	G G	intron_variant intron_variant	MODIFIER	HG02109.hp2 NA18946.hp1 HG02109.hp2 NA18946.hp1	a0001 a0024 a0001 a0024	a0001c0001 a0024c0155 a0001c0001 a0024c0155	a0001c0001t0001 a0024c0155t0001 a0001c0001t0001 a0024c0155t0001	a0001c0001t0001g0089 a0024c0155t0001g0033 a0001c0001t0001g0089 a0024c0155t0001g0033	2	250	0.0080	-33	c.428 others(50): Show c.428-4390_428-4358delTCTTTCTTTCTTTCCTTCTTTCTTTCTT TCCTT	LRP2	ENSG00000081479.15	transcript	ENST00000649046.1	protein_coding	4/78			chr2	TogoVar
LRP2_chr2_169122109_169367534	169299071	GAAAGAAA others(26): Show GAAAGAAAGAAAGAAGGAAAGAAAGAAAGAAAGA	G G	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00280.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0185 a0002c0003t0001g0185	1	250	0.0040	-33	c.428 others(50): Show c.428-4394_428-4362delTCTTTCTTTCTTTCTTTCCTTCTTTCTT TCTTT	LRP2	ENSG00000081479.15	transcript	ENST00000649046.1	protein_coding	4/78			chr2	TogoVar
LRPAP1_chr4_3498612_3537422	3522573	CTCCCTGC others(26): Show CTCCCTGCCTGGGGAAGTCGGACGCCGCCCCACA	C C	intron_variant intron_variant	MODIFIER	NA19006.hp1 NA19006.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0019 a0001c0001t0019	a0001c0001t0019g0278 a0001c0001t0019g0278	1	420	0.0024	-33	c.349 others(50): Show c.349+2301_349+2333delTGTGGGGCGGCGTCCGACTTCCCCAGGC AGGGA	LRPAP1	ENSG00000163956.13	transcript	ENST00000650182.1	protein_coding	2/7			chr4	TogoVar
LRRC14B_chr5_186495_201334	200954	CTACACAG others(26): Show CTACACAGCAGGCTGCCCCCATCACAGCCAGCGT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18978.hp2 NA18978.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0002 a0001c0001t0002g0002	1	470	0.0021	-33	c.56 others(44): Show c.5602_*5634delTACACAGCAGGCTGCCCCCATCACAGCCAGCGT	LRRC14B	ENSG00000185028.4	transcript	ENST00000328278.4	protein_coding		4621		chr5	TogoVar
LRRC2_chr3_46510385_46571302	46554284	GTGCTGGG others(26): Show GTGCTGGGATTATCGGCATGAGACAGTCTGCCCA	G G	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp2 HG00408.hp1 others(178): Show HG00099.hp2 HG00140.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00673.hp2 HG00738.hp1 HG00738.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01123.hp1 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01256.hp2 HG01258.hp1 HG01496.hp1 HG01891.hp1 HG01934.hp1 HG01934.hp2 HG01952.hp2 HG01978.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp2 HG02015.hp1 HG02040.hp1 HG02040.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp2 HG02074.hp1 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02129.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02165.hp2 HG02257.hp2 HG02258.hp2 HG02300.hp1 HG02300.hp2 HG02622.hp2 HG02647.hp2 HG02717.hp1 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp2 HG02922.hp1 HG02965.hp1 HG02965.hp2 HG02970.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03239.hp1 HG03491.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp2 HG03669.hp1 HG03688.hp2 HG03710.hp1 HG03834.hp2 HG04115.hp1 HG04184.hp2 HG04204.hp2 HG06807.hp1 NA18522.hp1 NA18612.hp1 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18942.hp1 NA18942.hp2 NA18944.hp2 NA18945.hp2 NA18951.hp1 NA18951.hp2 NA18954.hp2 NA18955.hp1 NA18955.hp2 NA18957.hp2 NA18959.hp1 NA18960.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18965.hp1 NA18965.hp2 NA18966.hp2 NA18967.hp1 NA18967.hp2 NA18968.hp1 NA18968.hp2 NA18970.hp2 NA18973.hp2 NA18974.hp1 NA18975.hp1 NA18975.hp2 NA18980.hp1 NA18980.hp2 NA18982.hp1 NA18983.hp2 NA18984.hp2 NA18986.hp1 NA18986.hp2 NA18989.hp1 NA18989.hp2 NA18991.hp2 NA18992.hp2 NA18998.hp1 NA19003.hp1 NA19004.hp1 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp2 NA19055.hp1 NA19055.hp2 NA19057.hp1 NA19057.hp2 NA19062.hp1 NA19062.hp2 NA19063.hp1 NA19064.hp1 NA19064.hp2 NA19066.hp1 NA19066.hp2 NA19068.hp1 NA19070.hp1 NA19070.hp2 NA19075.hp1 NA19075.hp2 NA19078.hp1 NA19079.hp2 NA19080.hp1 NA19081.hp1 NA19081.hp2 NA19082.hp1 NA19085.hp2 NA19086.hp1 NA19087.hp2 NA19090.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20300.hp1 NA20752.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(4): Show a0001 a0002 a0003 a0004 a0005 a0006 a0008	a0001c0001 a0002c0002 a0003c0003 others(4): Show a0001c0001 a0002c0002 a0003c0003 a0004c0004 a0005c0005 a0006c0006 a0008c0007	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(31): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0010 a0001c0001t0013 a0001c0001t0014 a0001c0001t0015 a0001c0001t0018 a0001c0001t0019 a0001c0001t0021 a0001c0001t0023 a0001c0001t0024 a0001c0001t0030 a0001c0001t0032 a0001c0001t0038 a0001c0001t0039 a0001c0001t0041 a0001c0001t0042 a0001c0001t0043 a0001c0001t0047 a0002c0002t0002 a0002c0002t0018 a0002c0002t0022 a0002c0002t0044 a0003c0003t0004 a0003c0003t0045 a0004c0004t0002 a0005c0005t0029 a0006c0006t0001 a0008c0007t0002	a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0010 others(172): Show a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0010 a0001c0001t0001g0022 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0087 a0001c0001t0001g0089 a0001c0001t0001g0092 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0112 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0141 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0165 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0172 a0001c0001t0001g0173 a0001c0001t0001g0174 a0001c0001t0001g0175 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0179 a0001c0001t0001g0180 a0001c0001t0001g0181 a0001c0001t0001g0182 a0001c0001t0001g0184 a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0188 a0001c0001t0001g0189 a0001c0001t0001g0190 a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0195 a0001c0001t0001g0196 a0001c0001t0001g0197 a0001c0001t0001g0198 a0001c0001t0001g0199 a0001c0001t0001g0202 a0001c0001t0001g0203 a0001c0001t0001g0204 a0001c0001t0001g0205 a0001c0001t0001g0206 a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0209 a0001c0001t0001g0210 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0213 a0001c0001t0001g0214 a0001c0001t0001g0225 a0001c0001t0001g0269 a0001c0001t0001g0342 a0001c0001t0001g0345 a0001c0001t0002g0009 a0001c0001t0002g0046 a0001c0001t0002g0084 a0001c0001t0002g0090 a0001c0001t0002g0102 a0001c0001t0002g0103 a0001c0001t0002g0110 a0001c0001t0002g0111 a0001c0001t0002g0122 a0001c0001t0002g0123 a0001c0001t0002g0124 a0001c0001t0002g0125 a0001c0001t0002g0126 a0001c0001t0002g0128 a0001c0001t0002g0129 a0001c0001t0002g0130 a0001c0001t0002g0131 a0001c0001t0002g0132 a0001c0001t0002g0135 a0001c0001t0002g0137 a0001c0001t0002g0215 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0218 a0001c0001t0002g0219 a0001c0001t0002g0220 a0001c0001t0002g0221 a0001c0001t0002g0222 a0001c0001t0002g0223 a0001c0001t0002g0224 a0001c0001t0002g0227 a0001c0001t0002g0270 a0001c0001t0002g0282 a0001c0001t0002g0283 a0001c0001t0003g0187 a0001c0001t0005g0151 a0001c0001t0005g0159 a0001c0001t0006g0043 a0001c0001t0006g0086 a0001c0001t0006g0101 a0001c0001t0006g0183 a0001c0001t0006g0200 a0001c0001t0007g0001 a0001c0001t0007g0136 a0001c0001t0007g0163 a0001c0001t0008g0166 a0001c0001t0008g0178 a0001c0001t0008g0194 a0001c0001t0008g0337 a0001c0001t0010g0134 a0001c0001t0013g0095 a0001c0001t0014g0162 a0001c0001t0015g0104 a0001c0001t0015g0107 a0001c0001t0015g0121 a0001c0001t0018g0170 a0001c0001t0019g0344 a0001c0001t0021g0127 a0001c0001t0021g0133 a0001c0001t0023g0139 a0001c0001t0023g0140 a0001c0001t0024g0346 a0001c0001t0024g0347 a0001c0001t0030g0093 a0001c0001t0032g0155 a0001c0001t0038g0091 a0001c0001t0039g0099 a0001c0001t0041g0085 a0001c0001t0042g0201 a0001c0001t0043g0343 a0001c0001t0047g0142 a0002c0002t0002g0108 a0002c0002t0002g0118 a0002c0002t0002g0138 a0002c0002t0002g0158 a0002c0002t0002g0230 a0002c0002t0002g0331 a0002c0002t0002g0332 a0002c0002t0002g0333 a0002c0002t0002g0339 a0002c0002t0002g0340 a0002c0002t0002g0341 a0002c0002t0018g0088 a0002c0002t0022g0100 a0002c0002t0044g0338 a0003c0003t0004g0109 a0003c0003t0004g0335 a0003c0003t0045g0094 a0004c0004t0002g0164 a0004c0004t0002g0336 a0005c0005t0029g0154 a0006c0006t0001g0171 a0006c0006t0001g0193 a0008c0007t0002g0334	181	364	0.4973	-33	c.-19 others(50): Show c.-19-2707_-19-2675delTGGGCAGACTGTCTCATGCCGATAATCC CAGCA	LRRC2	ENSG00000163827.14	transcript	ENST00000395905.8	protein_coding	1/8			chr3	TogoVar
LRRC4B_chr19_50511892_50573435	50520218	AAAAAAAA others(26): Show AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAG	A A	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG02486.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0080 a0001c0003t0001g0080	1	360	0.0028	-33	c.298 others(48): Show c.298-836_298-804delCTTCTTTTTTTTTTTTTTTTTTTTTTTTTT TTT	LRRC4B	ENSG00000131409.13	transcript	ENST00000652263.1	protein_coding	2/2			chr19	TogoVar
LRRC4C_chr11_40109209_41464652	40630330	CTCTTCTT others(26): Show CTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT	C C	intron_variant intron_variant	MODIFIER	HG01074.hp2 HG02055.hp2 HG02809.hp1 others(2): Show HG01074.hp2 HG02055.hp2 HG02809.hp1 HG03139.hp2 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0002t0002	a0001c0001t0001g0031 a0001c0001t0001g0042 a0001c0001t0002g0036 others(2): Show a0001c0001t0001g0031 a0001c0001t0001g0042 a0001c0001t0002g0036 a0001c0002t0001g0045 a0001c0002t0002g0008	5	48	0.1042	-33	c.-27 others(54): Show c.-270+17779_-270+17811delAGAAGAAGAAGAAGAAGAAGAAGA AGAAGAAGA	LRRC4C	ENSG00000148948.8	transcript	ENST00000528697.6	protein_coding	3/6			chr11	TogoVar

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