Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
ZNF511_chr10_133303914_133318161	133317674	CCCCCCCC others(26): Show CCCCCCCCCCAGACACAGAGATGGAAAGACCACA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01109.hp1 HG01109.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0018 a0001c0002t0001g0018	1	282	0.0036	-33	c.48 others(44): Show c.4809_*4841delCCCCCCCCCAGACACAGAGATGGAAAGACCACA	ZNF511	ENSG00000198546.15	transcript	ENST00000361518.10	protein_coding		4514		chr10	TogoVar
ZNF516_chr18_76352682_76500242	76425013	ACAGGTGA others(26): Show ACAGGTGAAAAGGTTCCCCCGAAACACACACACG	A A	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG02486.hp1	a0010 a0010	a0010c0047 a0010c0047	a0010c0047t0063 a0010c0047t0063	a0010c0047t0063g0343 a0010c0047t0063g0343	1	346	0.0029	-33	c.181 others(54): Show c.1810+16199_1810+16231delCGTGTGTGTGTTTCGGGGGAACCT TTTCACCTG	ZNF516	ENSG00000101493.11	transcript	ENST00000443185.7	protein_coding	3/6			chr18	TogoVar
ZNF516_chr18_76352682_76500242	76446070	GTCCCAGC others(26): Show GTCCCAGCCCTCATGCTCCCAGTCACCAGCCACA	G G	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00438.hp1 HG00673.hp2 others(32): Show HG00408.hp2 HG00438.hp1 HG00673.hp2 HG01175.hp2 HG01256.hp1 HG01258.hp1 HG01496.hp2 HG01928.hp1 HG01934.hp1 HG01952.hp2 HG01978.hp1 HG01993.hp1 HG02004.hp2 HG02015.hp2 HG02027.hp2 HG02056.hp1 HG02071.hp1 HG02074.hp1 HG02132.hp2 HG02165.hp1 HG02738.hp2 HG04204.hp1 NA18747.hp2 NA18950.hp1 NA18952.hp2 NA18959.hp2 NA18960.hp2 NA18973.hp1 NA18977.hp2 NA18993.hp2 NA18998.hp1 NA19007.hp1 NA19009.hp2 NA19011.hp1 NA19012.hp2	a0001 a0004 a0009 others(1): Show a0001 a0004 a0009 a0013	a0001c0001 a0001c0002 a0001c0004 others(4): Show a0001c0001 a0001c0002 a0001c0004 a0001c0018 a0004c0010 a0009c0050 a0013c0037	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(28): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0001t0014 a0001c0001t0039 a0001c0001t0040 a0001c0001t0041 a0001c0001t0066 a0001c0001t0140 a0001c0001t0148 a0001c0001t0157 a0001c0001t0158 a0001c0001t0185 a0001c0001t0187 a0001c0001t0188 a0001c0002t0002 a0001c0002t0005 a0001c0002t0007 a0001c0002t0011 a0001c0002t0019 a0001c0002t0141 a0001c0002t0151 a0001c0002t0165 a0001c0004t0076 a0001c0018t0001 a0001c0018t0010 a0004c0010t0037 a0009c0050t0009 a0013c0037t0002	a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0002g0205 others(32): Show a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0002g0205 a0001c0001t0002g0340 a0001c0001t0004g0339 a0001c0001t0005g0283 a0001c0001t0007g0247 a0001c0001t0014g0052 a0001c0001t0039g0188 a0001c0001t0040g0191 a0001c0001t0041g0149 a0001c0001t0066g0190 a0001c0001t0140g0254 a0001c0001t0148g0057 a0001c0001t0157g0065 a0001c0001t0158g0053 a0001c0001t0185g0323 a0001c0001t0187g0089 a0001c0001t0188g0051 a0001c0002t0002g0046 a0001c0002t0002g0047 a0001c0002t0005g0067 a0001c0002t0007g0187 a0001c0002t0011g0045 a0001c0002t0011g0338 a0001c0002t0019g0064 a0001c0002t0141g0058 a0001c0002t0151g0168 a0001c0002t0165g0048 a0001c0004t0076g0062 a0001c0018t0001g0056 a0001c0018t0010g0189 a0004c0010t0037g0245 a0009c0050t0009g0066 a0013c0037t0002g0060	35	346	0.1012	-33	c.-15 others(52): Show c.-157-2892_-157-2860delTGTGGCTGGTGACTGGGAGCATGAGG GCTGGGA	ZNF516	ENSG00000101493.11	transcript	ENST00000443185.7	protein_coding	2/6			chr18	TogoVar
ZNF562_chr19_9636807_9680100	9641959	CGTTACAA others(26): Show CGTTACAAAGTACATTCTCAAGGGCGGGGAGGAT	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03195.hp1 HG03195.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0123 a0001c0001t0123	a0001c0001t0123g0194 a0001c0001t0123g0194	1	290	0.0035	-33	c.10 others(46): Show c.10957_*10989delATCCTCCCCGCCCTTGAGAATGTACTTTGTAA C	ZNF562	ENSG00000171466.10	transcript	ENST00000453372.7	protein_coding	6/6	10957		chr19	TogoVar
ZNF568_chr19_36911332_36957734	36927854	GTGTGTGT others(26): Show GTGTGTGTATATATATATATATATATATATATAT	G G	intron_variant intron_variant	MODIFIER	HG02886.hp2 HG02886.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0262 a0002c0002t0002g0262	1	346	0.0029	-33	c.135 others(50): Show c.135+2598_135+2630delGTGTGTATATATATATATATATATATAT ATATT	ZNF568	ENSG00000198453.15	transcript	ENST00000333987.12	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr19	TogoVar
ZNF568_chr19_36911332_36957734	36927878	ATATATAT others(26): Show ATATATATATTATATATATATATATATTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00642.hp1 HG01175.hp1 others(25): Show HG00280.hp1 HG00642.hp1 HG01175.hp1 HG01192.hp1 HG01243.hp1 HG01255.hp1 HG01257.hp2 HG01258.hp2 HG01261.hp1 HG01433.hp1 HG01515.hp2 HG01516.hp2 HG01934.hp1 HG01943.hp1 HG02300.hp2 HG02559.hp1 HG02683.hp2 HG02895.hp1 HG02897.hp2 HG03704.hp1 HG04115.hp2 HG04184.hp2 HG04199.hp2 NA18952.hp2 NA18963.hp1 NA18992.hp1 NA20129.hp1 NA21309.hp2	a0002 a0002	a0002c0002 a0002c0010 a0002c0013 others(1): Show a0002c0002 a0002c0010 a0002c0013 a0002c0014	a0002c0002t0002 a0002c0002t0004 a0002c0002t0012 others(3): Show a0002c0002t0002 a0002c0002t0004 a0002c0002t0012 a0002c0010t0002 a0002c0013t0002 a0002c0014t0002	a0002c0002t0002g0012 a0002c0002t0002g0013 a0002c0002t0002g0252 others(23): Show a0002c0002t0002g0012 a0002c0002t0002g0013 a0002c0002t0002g0252 a0002c0002t0002g0256 a0002c0002t0002g0257 a0002c0002t0002g0261 a0002c0002t0002g0269 a0002c0002t0002g0271 a0002c0002t0002g0272 a0002c0002t0002g0274 a0002c0002t0002g0275 a0002c0002t0002g0276 a0002c0002t0002g0277 a0002c0002t0002g0278 a0002c0002t0002g0279 a0002c0002t0002g0280 a0002c0002t0002g0282 a0002c0002t0002g0283 a0002c0002t0002g0315 a0002c0002t0004g0281 a0002c0002t0012g0270 a0002c0002t0012g0273 a0002c0002t0012g0320 a0002c0010t0002g0260 a0002c0013t0002g0259 a0002c0014t0002g0020	28	346	0.0809	-33	c.135 others(50): Show c.135+2622_135+2654delATATATATTATATATATATATATATTTT TTTTT	ZNF568	ENSG00000198453.15	transcript	ENST00000333987.12	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr19	TogoVar
ZNF568_chr19_36911332_36957734	36927880	ATATATAT others(26): Show ATATATATTATATATATATATATATTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01071.hp1 HG01243.hp2 others(3): Show HG01070.hp1 HG01071.hp1 HG01243.hp2 HG01433.hp2 HG03239.hp2 homoSapiens_chm13v2.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0011 a0002c0002t0002g0263 a0002c0002t0002g0265 others(2): Show a0002c0002t0002g0011 a0002c0002t0002g0263 a0002c0002t0002g0265 a0002c0002t0002g0266 a0002c0002t0002g0267	6	346	0.0173	-33	c.135 others(50): Show c.135+2624_135+2656delATATATTATATATATATATATATTTTTT TTTTT	ZNF568	ENSG00000198453.15	transcript	ENST00000333987.12	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr19	TogoVar
ZNF568_chr19_36911332_36957734	36927882	ATATATTA others(26): Show ATATATTATATATATATATATATTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG01952.hp1 HG03491.hp1 others(1): Show HG00140.hp2 HG01952.hp1 HG03491.hp1 HG04184.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0012 a0002c0002t0002 a0002c0002t0012	a0002c0002t0002g0010 a0002c0002t0002g0322 a0002c0002t0012g0258 a0002c0002t0002g0010 a0002c0002t0002g0322 a0002c0002t0012g0258	4	346	0.0116	-33	c.135 others(50): Show c.135+2626_135+2658delATATTATATATATATATATATTTTTTTT TTTTT	ZNF568	ENSG00000198453.15	transcript	ENST00000333987.12	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr19	TogoVar
ZNF568_chr19_36911332_36957734	36927884	ATATTATA others(26): Show ATATTATATATATATATATATTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01361.hp2 HG01891.hp1 HG01934.hp2 others(11): Show HG01361.hp2 HG01891.hp1 HG01934.hp2 HG01943.hp2 HG02004.hp2 HG02109.hp2 HG02148.hp1 HG02451.hp1 HG02622.hp2 HG02630.hp1 HG03195.hp1 HG03209.hp1 NA18906.hp1 NA20300.hp1	a0002 a0002	a0002c0002 a0002c0006 a0002c0002 a0002c0006	a0002c0002t0002 a0002c0002t0004 a0002c0006t0002 others(1): Show a0002c0002t0002 a0002c0002t0004 a0002c0006t0002 a0002c0006t0035	a0002c0002t0002g0264 a0002c0002t0002g0306 a0002c0002t0002g0307 others(10): Show a0002c0002t0002g0264 a0002c0002t0002g0306 a0002c0002t0002g0307 a0002c0002t0004g0302 a0002c0002t0004g0303 a0002c0002t0004g0304 a0002c0002t0004g0305 a0002c0002t0004g0321 a0002c0006t0002g0019 a0002c0006t0002g0310 a0002c0006t0002g0311 a0002c0006t0002g0312 a0002c0006t0035g0313	14	346	0.0405	-33	c.135 others(50): Show c.135+2628_135+2660delATTATATATATATATATATTTTTTTTTT TTTTT	ZNF568	ENSG00000198453.15	transcript	ENST00000333987.12	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr19	TogoVar
ZNF568_chr19_36911332_36957734	36927886	ATTATATA others(26): Show ATTATATATATATATATATTTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG03834.hp1 NA18977.hp1 NA19080.hp2 HG03834.hp1 NA18977.hp1 NA19080.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0004 a0002c0002t0027 a0002c0002t0004 a0002c0002t0027	a0002c0002t0004g0018 a0002c0002t0027g0300 a0002c0002t0004g0018 a0002c0002t0027g0300	3	346	0.0087	-33	c.135 others(50): Show c.135+2631_135+2663delATATATATATATATATTTTTTTTTTTTT TTTTT	ZNF568	ENSG00000198453.15	transcript	ENST00000333987.12	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr19	TogoVar
ZNF573_chr19_37733302_37784586	37751069	TATATATA others(26): Show TATATATACTGTGTATATATACAGTATAGACAGC	T T	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG02155.hp1 HG02257.hp1 others(28): Show HG01081.hp2 HG02155.hp1 HG02257.hp1 HG02280.hp1 HG02280.hp2 HG02559.hp1 HG02559.hp2 HG02622.hp1 HG02647.hp2 HG02698.hp2 HG02809.hp1 HG02896.hp2 HG02897.hp2 HG02922.hp1 HG02970.hp1 HG03139.hp2 HG03654.hp2 HG04204.hp1 NA18941.hp1 NA18942.hp2 NA18947.hp1 NA18950.hp2 NA18963.hp2 NA18964.hp2 NA18969.hp2 NA18989.hp1 NA18990.hp1 NA19001.hp1 NA19062.hp2 NA19240.hp1 NA20805.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0002 a0002c0002t0002 a0001c0001t0002 a0002c0002t0002	a0001c0001t0002g0117 a0001c0001t0002g0120 a0001c0001t0002g0136 others(28): Show a0001c0001t0002g0117 a0001c0001t0002g0120 a0001c0001t0002g0136 a0001c0001t0002g0141 a0001c0001t0002g0160 a0001c0001t0002g0168 a0001c0001t0002g0181 a0001c0001t0002g0182 a0001c0001t0002g0183 a0001c0001t0002g0184 a0001c0001t0002g0196 a0001c0001t0002g0197 a0001c0001t0002g0203 a0002c0002t0002g0105 a0002c0002t0002g0106 a0002c0002t0002g0111 a0002c0002t0002g0115 a0002c0002t0002g0124 a0002c0002t0002g0128 a0002c0002t0002g0129 a0002c0002t0002g0130 a0002c0002t0002g0131 a0002c0002t0002g0133 a0002c0002t0002g0149 a0002c0002t0002g0159 a0002c0002t0002g0171 a0002c0002t0002g0172 a0002c0002t0002g0186 a0002c0002t0002g0188 a0002c0002t0002g0189 a0002c0002t0002g0200	31	350	0.0886	-33	c.296 others(52): Show c.296-10908_296-10876delGCTGTCTATACTGTATATATACACAG TATATAT	ZNF573	ENSG00000189144.15	transcript	ENST00000536220.7	protein_coding	4/4			chr19	TogoVar
ZNF592_chr15_84743592_84811445	84796237	AAAATATA others(26): Show AAAATATATATATATATATATATATATATTTTAT	A A	intron_variant intron_variant	MODIFIER	HG01255.hp2 HG02055.hp1 HG01255.hp2 HG02055.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0001c0001t0001 a0002c0002t0001	a0001c0001t0001g0350 a0002c0002t0001g0182 a0001c0001t0001g0350 a0002c0002t0001g0182	2	370	0.0054	-33	c.240 others(52): Show c.2400-1630_2400-1598delAATATATATATATATATATATATATA TTTTATA	ZNF592	ENSG00000166716.10	transcript	ENST00000560079.7	protein_coding	5/10		INFO_REALIGN_3_PRIME	chr15	TogoVar
ZNF627_chr19_11592483_11624161	11609179	TTATTAAT others(26): Show TTATTAATTGTGGCTATAAAAACAATTAAAAATC	T T	intron_variant intron_variant	MODIFIER	HG01993.hp1 HG01993.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0093 a0001c0001t0003g0093	1	322	0.0031	-33	c.4-5 others(46): Show c.4-5345_4-5313delTTAATTGTGGCTATAAAAACAATTAAAAATCT A	ZNF627	ENSG00000198551.10	transcript	ENST00000361113.10	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr19	TogoVar
ZNF652_chr17_49284206_49367250	49327751	ATATATAT others(26): Show ATATATATATATATATATATATATATATATTTTT	A A	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02451.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0094 a0001c0001t0094	a0001c0001t0094g0196 a0001c0001t0094g0196	1	382	0.0026	-33	c.-25 others(52): Show c.-258-9801_-258-9769delAAAAATATATATATATATATATATAT ATATATA	ZNF652	ENSG00000198740.9	transcript	ENST00000430262.3	protein_coding	1/5			chr17	TogoVar
ZNF691_chr1_42841613_42857477	42851864	TTGGAGGA others(26): Show TTGGAGGAAGATCTTCAGCATCTTTTGCTGCTAC	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00642.hp2 HG00642.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0005 a0001c0001t0004g0005	1	444	0.0023	-33	c.52 others(40): Show c.52_*84delTGGAGGAAGATCTTCAGCATCTTTTGCTGCTAC	ZNF691	ENSG00000164011.18	transcript	ENST00000651192.1	protein_coding	4/4	52		chr1	TogoVar
ZNF738_chr19_21354000_21393582	21389186	GAGAAAGA others(26): Show GAGAAAGAAAGAAAGAGAGAGAGGAAGGAAGGGA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18939.hp2 NA18939.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0020 a0001c0001t0020	a0001c0001t0020g0038 a0001c0001t0020g0038	1	354	0.0028	-33	c.55 others(44): Show c.5513_*5545delAGAAAGAAAGAAAGAGAGAGAGGAAGGAAGGGA	ZNF738	ENSG00000172687.14	transcript	ENST00000683779.1	protein_coding		605		chr19	TogoVar
ZNF74_chr22_20389151_20413455	20412970	GACCTGGC others(26): Show GACCTGGCCAAATTAACCCTTCAGTTTCACTTTC	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03688.hp1 HG03688.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0138 a0001c0001t0001g0138	1	422	0.0024	-33	c.60 others(44): Show c.6003_*6035delACCTGGCCAAATTAACCCTTCAGTTTCACTTTC	ZNF74	ENSG00000185252.19	transcript	ENST00000400451.7	protein_coding		4516		chr22	TogoVar
ZNF750_chr17_82824434_82845022	82843466	GTCCAGCT others(26): Show GTCCAGCTTACTTACCCTTCCCTTCCCCTCACCA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01168.hp2 HG01169.hp2 HG02145.hp2 others(4): Show HG01168.hp2 HG01169.hp2 HG02145.hp2 HG02965.hp1 HG02970.hp2 NA19030.hp2 NA19043.hp2	a0003 a0003	a0003c0006 a0003c0006	a0003c0006t0002 a0003c0006t0002	a0003c0006t0002g0009 a0003c0006t0002g0009	7	426	0.0164	-33	c.-37 others(44): Show c.-3755_-3723delTGGTGAGGGGAAGGGAAGGGTAAGTAAGCTGGA	ZNF750	ENSG00000141579.7	transcript	ENST00000269394.4	protein_coding		3445		chr17	TogoVar
ZNF765_chr19_53390149_53417009	53414457	ACACACAC others(26): Show ACACACACACACACACACACACACACACACACAC	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00140.hp1 HG00609.hp2 HG00642.hp1 others(11): Show HG00140.hp1 HG00609.hp2 HG00642.hp1 HG00741.hp2 HG01070.hp1 HG01081.hp2 HG01106.hp1 HG01106.hp2 HG01258.hp2 HG01496.hp1 HG01975.hp1 NA19004.hp2 NA19054.hp2 NA19075.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0003 a0001c0001t0019 a0001c0003t0001 a0001c0001t0003 a0001c0001t0019 a0001c0003t0001	a0001c0001t0003g0002 a0001c0001t0003g0016 a0001c0001t0003g0026 others(10): Show a0001c0001t0003g0002 a0001c0001t0003g0016 a0001c0001t0003g0026 a0001c0001t0003g0066 a0001c0001t0003g0133 a0001c0001t0003g0167 a0001c0001t0003g0171 a0001c0001t0003g0363 a0001c0001t0003g0367 a0001c0001t0003g0368 a0001c0001t0003g0380 a0001c0001t0019g0242 a0001c0003t0001g0017	14	448	0.0313	-33	c.53 others(44): Show c.5331_*5363delCACACACACACACACACACACACACACACACAC	ZNF765	ENSG00000196417.13	transcript	ENST00000396408.8	protein_coding		2449		chr19	TogoVar
ZNF772_chr19_57464586_57482566	57481312	AAATAGGC others(26): Show AAATAGGCAAAACTATGTTAGATGACAATGTAAG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19070.hp2 NA19070.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0004 a0002c0002t0004	a0002c0002t0004g0003 a0002c0002t0004g0003	1	394	0.0025	-33	c.-40 others(44): Show c.-4036_-4004delCTTACATTGTCATCTAACATAGTTTTGCCTATT	ZNF772	ENSG00000197128.13	transcript	ENST00000356584.8	protein_coding		3747		chr19	TogoVar
ZNF780B_chr19_40023260_40061231	40048816	GATTATGG others(26): Show GATTATGGTGAAATTGAAGAAAGTTGTTTCAAGA	G G	intron_variant intron_variant	MODIFIER	HG03195.hp1 HG03195.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0169 a0001c0001t0003g0169	1	290	0.0035	-33	c.10- others(44): Show c.10-53_10-21delTCTTGAAACAACTTTCTTCAATTTCACCATAAT	ZNF780B	ENSG00000128000.17	transcript	ENST00000434248.6	protein_coding	2/4			chr19	TogoVar
ZNF844_chr19_12059731_12086565	12059777	AGCAGCTG others(26): Show AGCAGCTGCAGAACGGCTGTGGATTCTGAGAAGG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18942.hp2 NA18942.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0116 a0001c0001t0002g0116	1	362	0.0028	-33	c.-50 others(44): Show c.-5096_-5064delGCAGCTGCAGAACGGCTGTGGATTCTGAGAAGG	ZNF844	ENSG00000223547.10	transcript	ENST00000439326.8	protein_coding		4953		chr19	TogoVar
ZNF862_chr7_149833375_149872479	149858844	AGGCCAGC others(26): Show AGGCCAGCTGTGGGGGCAGAGGGGCACACGCATG	A A	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00673.hp1 HG01069.hp1 others(29): Show HG00639.hp1 HG00673.hp1 HG01069.hp1 HG01071.hp2 HG01192.hp1 HG01243.hp1 HG01358.hp2 HG01433.hp1 HG01496.hp1 HG01978.hp2 HG02080.hp1 HG02145.hp1 HG02145.hp2 HG02486.hp2 HG02615.hp2 HG02723.hp2 HG03098.hp1 HG03490.hp1 HG03492.hp1 HG03516.hp1 HG03688.hp1 HG04204.hp2 NA18965.hp1 NA18968.hp1 NA18970.hp2 NA18982.hp2 NA18999.hp2 NA19043.hp2 NA19054.hp1 NA19090.hp1 NA20300.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 a0001c0001 a0001c0002 a0001c0004	a0001c0001t0002 a0001c0001t0004 a0001c0001t0040 others(8): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0040 a0001c0002t0010 a0001c0002t0020 a0001c0002t0031 a0001c0002t0032 a0001c0002t0033 a0001c0004t0006 a0001c0004t0007 a0001c0004t0009	a0001c0001t0002g0044 a0001c0001t0002g0117 a0001c0001t0002g0128 others(21): Show a0001c0001t0002g0044 a0001c0001t0002g0117 a0001c0001t0002g0128 a0001c0001t0002g0130 a0001c0001t0002g0204 a0001c0001t0002g0239 a0001c0001t0004g0011 a0001c0001t0004g0024 a0001c0001t0004g0033 a0001c0001t0004g0093 a0001c0001t0004g0108 a0001c0001t0004g0121 a0001c0001t0040g0011 a0001c0002t0010g0133 a0001c0002t0010g0144 a0001c0002t0020g0122 a0001c0002t0031g0007 a0001c0002t0032g0007 a0001c0002t0033g0007 a0001c0004t0006g0002 a0001c0004t0007g0100 a0001c0004t0009g0002 a0001c0004t0009g0018 a0001c0004t0009g0019	32	412	0.0777	-33	c.111 others(50): Show c.1118-514_1118-482delATGGGCCAGCTGTGGGGGCAGAGGGGCA CACGC	ZNF862	ENSG00000106479.11	transcript	ENST00000223210.5	protein_coding	5/7		INFO_REALIGN_3_PRIME	chr7	TogoVar
ZNF862_chr7_149833375_149872479	149858908	ATGGGCCA others(26): Show ATGGGCCAGCTGTGGGGGCAGAGGGGCACACGCG	A A	intron_variant intron_variant	MODIFIER	HG01346.hp1 HG01496.hp2 HG02027.hp1 HG01346.hp1 HG01496.hp2 HG02027.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0002c0003 a0001c0002 a0002c0003	a0001c0002t0010 a0002c0003t0001 a0001c0002t0010 a0002c0003t0001	a0001c0002t0010g0173 a0001c0002t0010g0177 a0002c0003t0001g0338 a0001c0002t0010g0173 a0001c0002t0010g0177 a0002c0003t0001g0338	3	412	0.0073	-33	c.111 others(50): Show c.1118-366_1118-334delGGCAGAGGGGCACACGCGTGGGCCAGCT GTGGG	ZNF862	ENSG00000106479.11	transcript	ENST00000223210.5	protein_coding	5/7		INFO_REALIGN_3_PRIME	chr7	TogoVar
ZNF865_chr19_55600647_55622269	55610312	GTGCAGTG others(26): Show GTGCAGTGGCACGATCTCAGCTCACTGCAACCTC	G G	intron_variant intron_variant	MODIFIER	HG01993.hp2 HG01993.hp2	a0009 a0009	a0009c0023 a0009c0023	a0009c0023t0001 a0009c0023t0001	a0009c0023t0001g0143 a0009c0023t0001g0143	1	430	0.0023	-33	c.-26 others(50): Show c.-26-3280_-26-3248delTGCAGTGGCACGATCTCAGCTCACTGCA ACCTC	ZNF865	ENSG00000261221.5	transcript	ENST00000568956.2	protein_coding	1/1			chr19	TogoVar
ZNF892_chr2_95202521_95228839	95222075	ATTCCACT others(26): Show ATTCCACTGCACCAACAAATTCCACCTGTGCTGC	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02015.hp2 HG02015.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0034 a0001c0001t0034	a0001c0001t0034g0001 a0001c0001t0034g0001	1	332	0.0030	-33	c.64 others(44): Show c.6475_*6507delCCACTGCACCAACAAATTCCACCTGTGCTGCTT	ZNF892	ENSG00000233757.7	transcript	ENST00000425953.6	protein_coding	5/5	6475	INFO_REALIGN_3_PRIME	chr2	TogoVar
ZPBP_chr7_49932441_50098246	49980034	ATTATAAT others(26): Show ATTATAATATATATAATATAATTTTATATTATAT	A A	intron_variant intron_variant	MODIFIER	NA18954.hp2 NA18954.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0242 a0001c0001t0001g0242	1	278	0.0036	-33	c.961 others(50): Show c.961+3275_961+3307delATATAATATAAAATTATATTATATATAT TATAA	ZPBP	ENSG00000042813.8	transcript	ENST00000046087.7	protein_coding	7/7			chr7	TogoVar
ZRANB3_chr2_135191969_135536218	135426858	AAAAAAAT others(26): Show AAAAAAATATATATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG01192.hp1 HG02280.hp1 others(7): Show HG00621.hp1 HG01192.hp1 HG02280.hp1 HG02965.hp1 HG03491.hp1 HG04115.hp1 NA18952.hp1 NA18986.hp2 NA18990.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0001 a0001c0005t0004 a0001c0001t0001 a0001c0005t0004	a0001c0001t0001g0120 a0001c0001t0001g0129 a0001c0001t0001g0131 others(7): Show a0001c0001t0001g0120 a0001c0001t0001g0129 a0001c0001t0001g0131 a0001c0001t0001g0134 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0164 a0001c0001t0001g0167 a0001c0005t0004g0092 a0001c0005t0004g0093	10	214	0.0467	-33	c.162 others(52): Show c.162-36071_162-36039delATATATATATATATATATATATATAT ATTTTTT	ZRANB3	ENSG00000121988.18	transcript	ENST00000264159.11	protein_coding	2/20			chr2	TogoVar
ZRANB3_chr2_135191969_135536218	135426860	AAAAATAT others(26): Show AAAAATATATATATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01175.hp1 HG01943.hp2 HG02165.hp2 others(18): Show HG01175.hp1 HG01943.hp2 HG02165.hp2 HG02683.hp2 HG03688.hp2 HG03942.hp2 HG04199.hp2 NA18747.hp2 NA18939.hp2 NA18941.hp1 NA18971.hp1 NA18979.hp2 NA18982.hp2 NA18993.hp2 NA19004.hp1 NA19070.hp2 NA19074.hp1 NA19079.hp1 NA19084.hp1 NA19088.hp2 NA19091.hp2	a0001 a0001	a0001c0001 a0001c0012 a0001c0001 a0001c0012	a0001c0001t0001 a0001c0001t0013 a0001c0001t0018 others(1): Show a0001c0001t0001 a0001c0001t0013 a0001c0001t0018 a0001c0012t0001	a0001c0001t0001g0117 a0001c0001t0001g0124 a0001c0001t0001g0126 others(18): Show a0001c0001t0001g0117 a0001c0001t0001g0124 a0001c0001t0001g0126 a0001c0001t0001g0133 a0001c0001t0001g0144 a0001c0001t0001g0155 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0163 a0001c0001t0001g0168 a0001c0001t0001g0170 a0001c0001t0001g0172 a0001c0001t0001g0173 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0184 a0001c0001t0013g0169 a0001c0001t0013g0183 a0001c0001t0018g0132 a0001c0012t0001g0149	21	214	0.0981	-33	c.162 others(52): Show c.162-36073_162-36041delATATATATATATATATATATATATAT ATATTTT	ZRANB3	ENSG00000121988.18	transcript	ENST00000264159.11	protein_coding	2/20			chr2	TogoVar
ZRANB3_chr2_135191969_135536218	135426862	AAATATAT others(26): Show AAATATATATATATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG04228.hp1 HG04228.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0154 a0001c0001t0001g0154	1	214	0.0047	-33	c.162 others(52): Show c.162-36075_162-36043delATATATATATATATATATATATATAT ATATATT	ZRANB3	ENSG00000121988.18	transcript	ENST00000264159.11	protein_coding	2/20			chr2	TogoVar
ZSCAN32_chr16_3377085_3406004	3393206	ATTTATAT others(26): Show ATTTATATATATATATATATATAAATTTATATAT	A A	intron_variant intron_variant	MODIFIER	HG03195.hp2 HG03195.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0100 a0002c0002t0002g0100	1	400	0.0025	-33	c.532 others(48): Show c.532+410_532+442delATATATAAATTTATATATATATATATATAT AAA	ZSCAN32	ENSG00000140987.21	transcript	ENST00000396852.9	protein_coding	3/6			chr16	TogoVar
ZSCAN5A_chr19_56216303_56319839	56224003	CTCTCTAG others(26): Show CTCTCTAGACTCCAGCACCTGCCTGCGCCTGGAA	C C	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG02723.hp1 HG02818.hp2 others(6): Show HG02647.hp2 HG02723.hp1 HG02818.hp2 HG02895.hp1 HG02897.hp2 HG02965.hp2 HG02970.hp2 HG03579.hp2 NA18522.hp2	a0001 a0001	a0001c0001 a0001c0007 a0001c0001 a0001c0007	a0001c0001t0001 a0001c0007t0002 a0001c0001t0001 a0001c0007t0002	a0001c0001t0001g0183 a0001c0001t0001g0196 a0001c0001t0001g0197 others(6): Show a0001c0001t0001g0183 a0001c0001t0001g0196 a0001c0001t0001g0197 a0001c0001t0001g0232 a0001c0001t0001g0282 a0001c0001t0001g0330 a0001c0001t0001g0333 a0001c0001t0001g0340 a0001c0007t0002g0032	9	362	0.0249	-33	c.385 others(48): Show c.385-202_385-170delTTCCAGGCGCAGGCAGGTGCTGGAGTCTAG AGA	ZSCAN5A	ENSG00000131848.10	transcript	ENST00000683990.1	protein_coding	3/5			chr19	TogoVar
ZSWIM5_chr1_45011399_45211605	45044735	AAAAAAAA others(26): Show AAAAAAAAAAAAATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02083.hp2 HG03654.hp2 NA18962.hp1 others(1): Show HG02083.hp2 HG03654.hp2 NA18962.hp1 NA18971.hp2	a0001 a0001	a0001c0002 a0001c0003 a0001c0002 a0001c0003	a0001c0002t0001 a0001c0003t0001 a0001c0003t0003 a0001c0002t0001 a0001c0003t0001 a0001c0003t0003	a0001c0002t0001g0026 a0001c0003t0001g0185 a0001c0003t0003g0212 others(1): Show a0001c0002t0001g0026 a0001c0003t0001g0185 a0001c0003t0003g0212 a0001c0003t0003g0223	4	234	0.0171	-33	c.143 others(52): Show c.1433-1373_1433-1341delATATATATATATATATATATATTTTT TTTTTTT	ZSWIM5	ENSG00000162415.7	transcript	ENST00000359600.6	protein_coding	5/13			chr1	TogoVar
ZSWIM5_chr1_45011399_45211605	45044737	AAAAAAAA others(26): Show AAAAAAAAAAATATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00609.hp1 HG00642.hp2 others(30): Show HG00408.hp1 HG00609.hp1 HG00642.hp2 HG01099.hp2 HG01358.hp1 HG01361.hp1 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02109.hp1 HG02129.hp1 HG02132.hp2 HG02135.hp2 HG02165.hp1 HG02258.hp2 HG02300.hp2 HG02723.hp1 HG02970.hp2 HG02976.hp1 HG03704.hp1 HG03942.hp1 HG04115.hp1 HG06807.hp1 NA18945.hp1 NA18953.hp1 NA18955.hp1 NA18956.hp1 NA18957.hp2 NA18970.hp1 NA18990.hp1 NA19086.hp1 NA20752.hp2 homoSapiens_chm13v2.hp1	a0001 a0003 a0001 a0003	a0001c0002 a0001c0003 a0001c0007 others(2): Show a0001c0002 a0001c0003 a0001c0007 a0001c0008 a0003c0017	a0001c0002t0001 a0001c0002t0016 a0001c0003t0001 others(7): Show a0001c0002t0001 a0001c0002t0016 a0001c0003t0001 a0001c0003t0003 a0001c0003t0009 a0001c0003t0015 a0001c0007t0001 a0001c0007t0013 a0001c0008t0001 a0003c0017t0001	a0001c0002t0001g0031 a0001c0002t0016g0234 a0001c0003t0001g0109 others(30): Show a0001c0002t0001g0031 a0001c0002t0016g0234 a0001c0003t0001g0109 a0001c0003t0001g0112 a0001c0003t0001g0113 a0001c0003t0001g0114 a0001c0003t0001g0116 a0001c0003t0001g0117 a0001c0003t0001g0123 a0001c0003t0001g0130 a0001c0003t0001g0133 a0001c0003t0001g0143 a0001c0003t0001g0162 a0001c0003t0001g0169 a0001c0003t0001g0187 a0001c0003t0001g0189 a0001c0003t0001g0210 a0001c0003t0003g0170 a0001c0003t0003g0205 a0001c0003t0003g0206 a0001c0003t0003g0211 a0001c0003t0003g0222 a0001c0003t0003g0225 a0001c0003t0003g0226 a0001c0003t0009g0151 a0001c0003t0009g0180 a0001c0003t0015g0233 a0001c0007t0001g0032 a0001c0007t0001g0035 a0001c0007t0013g0024 a0001c0008t0001g0033 a0001c0008t0001g0034 a0003c0017t0001g0126	33	234	0.1410	-33	c.143 others(52): Show c.1433-1375_1433-1343delATATATATATATATATATATATATTT TTTTTTT	ZSWIM5	ENSG00000162415.7	transcript	ENST00000359600.6	protein_coding	5/13			chr1	TogoVar
ZSWIM5_chr1_45011399_45211605	45044739	AAAAAAAA others(26): Show AAAAAAAAATATATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG04184.hp2 NA20129.hp1 HG04184.hp2 NA20129.hp1	a0001 a0001	a0001c0002 a0001c0003 a0001c0002 a0001c0003	a0001c0002t0001 a0001c0003t0001 a0001c0002t0001 a0001c0003t0001	a0001c0002t0001g0006 a0001c0003t0001g0128 a0001c0002t0001g0006 a0001c0003t0001g0128	2	234	0.0086	-33	c.143 others(52): Show c.1433-1377_1433-1345delATATATATATATATATATATATATAT TTTTTTT	ZSWIM5	ENSG00000162415.7	transcript	ENST00000359600.6	protein_coding	5/13			chr1	TogoVar
ZSWIM7_chr17_15971560_16004704	15976095	AAAAATAT others(26): Show AAAAATATATATATATATATATATATATATATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02647.hp1 HG02647.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0024 a0001c0001t0003g0024	1	344	0.0029	-33	c.19 others(44): Show c.1919_*1951delATATATATATATATATATATATATATATATTTT	ZSWIM7	ENSG00000214941.8	transcript	ENST00000399277.6	protein_coding		464		chr17	TogoVar
ZXDC_chr3_126432601_126480891	126433210	CTGGGGAT others(26): Show CTGGGGATCAAGGTGGCCAGAGGCCCAGGGTAAG	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18997.hp2 NA18997.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0014	a0001c0001t0014g0177 a0001c0001t0014g0177	1	390	0.0026	-33	c.51 others(44): Show c.5132_*5164delCTTACCCTGGGCCTCTGGCCACCTTGATCCCCA	ZXDC	ENSG00000070476.15	transcript	ENST00000389709.8	protein_coding		4390		chr3	TogoVar
ZYX_chr7_143376345_143396111	143381162	GATCAGGG others(26): Show GATCAGGGCCCCTTCCTGGGGGAGTTTCCTGCCT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01261.hp2 HG01261.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0008 a0002c0002t0003g0008	1	454	0.0022	-33	c.-26 others(42): Show c.-262_-230delATCAGGGCCCCTTCCTGGGGGAGTTTCCTGCCT	ZYX	ENSG00000159840.16	transcript	ENST00000322764.10	protein_coding		182		chr7	TogoVar

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Search Results (Total: 2438 hits)