regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
RNF169_chr11_74743849_74847413 | 74785160 | TATATATA others(30): Show |
T | intron_variant | MODIFIER | HG02451.hp2 HG02572.hp2 HG02647.hp2 others(7): Show |
a0001a0004 | a0001c0001a0001c0006a0004c0004 | a0001c0001t0011a0001c0001t0045a0001c0006t0044others(1): Show | a0001c0001t0011g0007a0001c0001t0011g0123a0001c0001t0011g0134others(6): Show | 10 | 354 | 0.0283 | -37 | c.503 others(54): Show |
RNF169 | ENSG00000166439.6 | transcript | ENST00000299563.5 | protein_coding | 1/5 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |||||
RNF175_chr4_153705160_153765024 | 153746432 | TCCGTAGC others(30): Show |
T | intron_variant | MODIFIER | NA18747.hp1 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0162 | 1 | 394 | 0.0025 | -37 | c.246 others(54): Show |
RNF175 | ENSG00000145428.15 | transcript | ENST00000347063.9 | protein_coding | 3/8 | chr4 | TogoVar | ||||||
RNF175_chr4_153705160_153765024 | 153746556 | TAGGCTGG others(30): Show |
T | intron_variant | MODIFIER | NA18747.hp1 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0162 | 1 | 394 | 0.0025 | -37 | c.246 others(54): Show |
RNF175 | ENSG00000145428.15 | transcript | ENST00000347063.9 | protein_coding | 3/8 | chr4 | TogoVar | ||||||
RNF213_chr17_80255852_80403794 | 80355563 | AGGAAGAA others(30): Show |
A | intron_variant | MODIFIER | HG00738.hp2 HG04204.hp2 |
a0001 | a0001c0001a0001c0094 | a0001c0001t0001a0001c0094t0001 | a0001c0001t0001g0128a0001c0094t0001g0162 | 2 | 292 | 0.0069 | -37 | c.108 others(58): Show |
RNF213 | ENSG00000173821.20 | transcript | ENST00000582970.6 | protein_coding | 36/67 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
RNF213_chr17_80255852_80403794 | 80355692 | CCGGGAAT others(30): Show |
C | intron_variant | MODIFIER | HG00673.hp1 HG02630.hp2 |
a0001a0030 | a0001c0001a0030c0112 | a0001c0001t0002a0030c0112t0079 | a0001c0001t0002g0153a0030c0112t0079g0276 | 2 | 292 | 0.0069 | -37 | c.108 others(58): Show |
RNF213 | ENSG00000173821.20 | transcript | ENST00000582970.6 | protein_coding | 36/67 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
RNF213_chr17_80255852_80403794 | 80355707 | TACAGAGG others(30): Show |
T | intron_variant | MODIFIER | HG02615.hp1 | a0037 | a0037c0145 | a0037c0145t0035 | a0037c0145t0035g0174 | 1 | 292 | 0.0034 | -37 | c.108 others(58): Show |
RNF213 | ENSG00000173821.20 | transcript | ENST00000582970.6 | protein_coding | 36/67 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
RNF4_chr4_2464106_2520857 | 2470882 | AAATGCCA others(30): Show |
A | intron_variant | MODIFIER | NA19089.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0149 | 1 | 378 | 0.0027 | -37 | c.-15 others(56): Show |
RNF4 | ENSG00000063978.17 | transcript | ENST00000314289.13 | protein_coding | 1/7 | chr4 | TogoVar | ||||||
RNFT2_chr12_116733315_116858631 | 116841844 | TAAATATA others(30): Show |
T | intron_variant | MODIFIER | HG03209.hp1 | a0001 | a0001c0003 | a0001c0003t0014 | a0001c0003t0014g0065 | 1 | 268 | 0.0037 | -37 | c.120 others(56): Show |
RNFT2 | ENSG00000135119.15 | transcript | ENST00000257575.9 | protein_coding | 10/10 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
ROBO2_chr3_77035099_77654964 | 77164973 | TCCGGGAG others(30): Show |
T | intron_variant | MODIFIER | NA18522.hp2 | a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0002 | 1 | 160 | 0.0063 | -37 | c.388 others(56): Show |
ROBO2 | ENSG00000185008.19 | transcript | ENST00000696593.1 | protein_coding | 2/27 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
RPGRIP1L_chr16_53593153_53708859 | 53629719 | CTAACTCA others(30): Show |
C | intron_variant | MODIFIER | NA18962.hp2 | a0003 | a0003c0003 | a0003c0003t0006 | a0003c0003t0006g0138 | 1 | 364 | 0.0028 | -37 | c.329 others(56): Show |
RPGRIP1L | ENSG00000103494.16 | transcript | ENST00000647211.2 | protein_coding | 22/26 | chr16 | TogoVar | ||||||
RPH3AL_chr17_207389_357807 | 233824 | GGGGAGCG others(30): Show |
G | intron_variant | MODIFIER | HG02886.hp1 | a0001 | a0001c0001 | a0001c0001t0010 | a0001c0001t0010g0131 | 1 | 133 | 0.0075 | -37 | c.613 others(56): Show |
RPH3AL | ENSG00000181031.16 | transcript | ENST00000331302.12 | protein_coding | 7/9 | chr17 | TogoVar | ||||||
RPH3AL_chr17_207389_357807 | 233900 | GGGGAGCG others(30): Show |
G | intron_variant | MODIFIER | HG01167.hp2 HG02738.hp1 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0009a0001c0002t0002 | a0001c0001t0009g0094a0001c0002t0002g0038 | 2 | 133 | 0.0150 | -37 | c.613 others(56): Show |
RPH3AL | ENSG00000181031.16 | transcript | ENST00000331302.12 | protein_coding | 7/9 | chr17 | TogoVar | ||||||
RPH3AL_chr17_207389_357807 | 233932 | TGAGCAGG others(30): Show |
T | intron_variant | MODIFIER | NA19079.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0109 | 1 | 133 | 0.0075 | -37 | c.613 others(56): Show |
RPH3AL | ENSG00000181031.16 | transcript | ENST00000331302.12 | protein_coding | 7/9 | chr17 | TogoVar | ||||||
RPH3AL_chr17_207389_357807 | 234378 | CGAGCAGG others(30): Show |
C | intron_variant | MODIFIER | NA19043.hp2 | a0001 | a0001c0003 | a0001c0003t0028 | a0001c0003t0028g0088 | 1 | 133 | 0.0075 | -37 | c.613 others(56): Show |
RPH3AL | ENSG00000181031.16 | transcript | ENST00000331302.12 | protein_coding | 7/9 | chr17 | TogoVar | ||||||
RPH3AL_chr17_207389_357807 | 250566 | TCTTTACT others(30): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp2 HG00280.hp1 others(41): Show |
a0001a0005a0008 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(26): Show | a0001c0001t0001g0047a0001c0001t0001g0086a0001c0001t0001g0089others(41): Show | 44 | 133 | 0.3308 | -37 | c.439 others(54): Show |
RPH3AL | ENSG00000181031.16 | transcript | ENST00000331302.12 | protein_coding | 6/9 | chr17 | TogoVar | ||||||
RPS3_chr11_75394518_75411907 | 75409398 | TGCTGCCT others(30): Show |
T | downstream_gene_variant | MODIFIER | NA18980.hp1 | a0001 | a0001c0004 | a0001c0004t0001 | a0001c0004t0001g0001 | 1 | 412 | 0.0024 | -37 | c.*37 others(48): Show |
RPS3 | ENSG00000149273.15 | transcript | ENST00000531188.6 | protein_coding | 2492 | chr11 | TogoVar | ||||||
RPS6KA5_chr14_90842861_91065641 | 91056799 | TCCTAACC others(30): Show |
T | intron_variant | MODIFIER | HG02135.hp1 HG02280.hp2 HG02698.hp1 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0011a0001c0001t0095a0001c0001t0189others(6): Show | a0001c0001t0011g0223a0001c0001t0095g0272a0001c0001t0189g0216others(6): Show | 9 | 306 | 0.0294 | -37 | c.103 others(54): Show |
RPS6KA5 | ENSG00000100784.12 | transcript | ENST00000614987.5 | protein_coding | 1/16 | chr14 | TogoVar | ||||||
RPS6KB1_chr17_59888121_59955574 | 59909226 | CTTTTTTT others(30): Show |
C | intron_variant | MODIFIER | HG00639.hp2 HG03492.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0134a0001c0001t0001g0172 | 2 | 304 | 0.0066 | -37 | c.142 others(54): Show |
RPS6KB1 | ENSG00000108443.14 | transcript | ENST00000225577.9 | protein_coding | 1/14 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
RPTOR_chr17_80539838_80971368 | 80746188 | AGGTGATC others(30): Show |
A | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00323.hp1 others(78): Show |
a0001a0003a0004 | a0001c0001a0001c0002a0001c0003others(40): Show | a0001c0001t0002a0001c0001t0005a0001c0001t0009others(72): Show | a0001c0001t0002g0038a0001c0001t0005g0042a0001c0001t0005g0044others(78): Show | 81 | 196 | 0.4133 | -37 | c.655 others(54): Show |
RPTOR | ENSG00000141564.16 | transcript | ENST00000306801.8 | protein_coding | 5/33 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
RRAGD_chr6_89359616_89417273 | 89408064 | CATCTGTT others(30): Show |
C | intron_variant | MODIFIER | HG01169.hp1 | a0001 | a0001c0001 | a0001c0001t0027 | a0001c0001t0027g0243 | 1 | 372 | 0.0027 | -37 | c.148 others(54): Show |
RRAGD | ENSG00000025039.15 | transcript | ENST00000369415.9 | protein_coding | 1/6 | chr6 | TogoVar | ||||||
RRM1_chr11_4089799_4143932 | 4137981 | TGGCCGGG others(30): Show |
T | intron_variant | MODIFIER | HG01243.hp2 HG02647.hp2 HG02886.hp1 others(2): Show |
a0001a0002 | a0001c0003a0002c0007 | a0001c0003t0002a0001c0003t0004a0002c0007t0002 | a0001c0003t0002g0025a0001c0003t0002g0093a0001c0003t0004g0268others(2): Show | 5 | 368 | 0.0136 | -37 | c.219 others(54): Show |
RRM1 | ENSG00000167325.15 | transcript | ENST00000300738.10 | protein_coding | 18/18 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |||||
RRP12_chr10_97351701_97406340 | 97384338 | TGCAGCCT others(30): Show |
T | intron_variant | MODIFIER | NA19078.hp2 | a0003 | a0003c0002 | a0003c0002t0001 | a0003c0002t0001g0291 | 1 | 400 | 0.0025 | -37 | c.120 others(54): Show |
RRP12 | ENSG00000052749.14 | transcript | ENST00000370992.9 | protein_coding | 10/33 | chr10 | TogoVar | ||||||
RSPRY1_chr16_57181329_57245469 | 57201304 | TCTCCTCA others(30): Show |
T | intron_variant | MODIFIER | HG02257.hp1 HG02559.hp2 HG02572.hp1 others(3): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0001a0001c0004t0001 | a0001c0001t0001g0003a0001c0001t0001g0030a0001c0001t0001g0031others(3): Show | 6 | 358 | 0.0168 | -37 | c.-15 others(56): Show |
RSPRY1 | ENSG00000159579.14 | transcript | ENST00000394420.9 | protein_coding | 1/14 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |||||
RSRC1_chr3_158105089_158550730 | 158375984 | CTCTCCAC others(30): Show |
C | intron_variant | MODIFIER | HG01175.hp2 HG01243.hp2 HG01255.hp2 others(31): Show |
a0001a0005 | a0001c0001a0005c0003 | a0001c0001t0002a0001c0001t0004a0001c0001t0006others(6): Show | a0001c0001t0002g0007a0001c0001t0002g0020a0001c0001t0002g0022others(31): Show | 34 | 276 | 0.1232 | -37 | c.583 others(56): Show |
RSRC1 | ENSG00000174891.14 | transcript | ENST00000611884.5 | protein_coding | 6/9 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
RTTN_chr18_69998031_70210687 | 70102897 | TGCCCCGT others(30): Show |
T | intron_variant | MODIFIER | HG01891.hp2 HG02630.hp2 |
a0004 | a0004c0005 | a0004c0005t0001a0004c0005t0002 | a0004c0005t0001g0113a0004c0005t0002g0112 | 2 | 156 | 0.0128 | -37 | c.390 others(56): Show |
RTTN | ENSG00000176225.15 | transcript | ENST00000640769.2 | protein_coding | 28/48 | chr18 | TogoVar | ||||||
RUSF1_chr16_31484475_31513391 | 31512895 | GACAGTTA others(30): Show |
G | upstream_gene_variant | MODIFIER | HG02809.hp2 HG02896.hp2 NA19240.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0007a0001c0001t0011 | a0001c0001t0001g0060a0001c0001t0007g0069a0001c0001t0011g0044 | 3 | 378 | 0.0079 | -37 | c.-45 others(48): Show |
RUSF1 | ENSG00000140688.18 | transcript | ENST00000327237.7 | protein_coding | 4505 | chr16 | TogoVar | ||||||
RYR1_chr19_38428691_38592564 | 38584414 | TCCTGGCC others(30): Show |
T | intron_variant | MODIFIER | HG00609.hp1 HG01071.hp2 HG01884.hp2 others(12): Show |
a0001a0002a0003others(1): Show | a0001c0035a0001c0065a0001c0076others(7): Show | a0001c0035t0001a0001c0065t0001a0001c0076t0001others(7): Show | a0001c0035t0001g0113a0001c0065t0001g0131a0001c0076t0001g0164others(12): Show | 15 | 218 | 0.0688 | -37 | c.146 others(56): Show |
RYR1 | ENSG00000196218.14 | transcript | ENST00000359596.8 | protein_coding | 101/105 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | |||||
S1PR4_chr19_3173769_3185332 | 3174518 | CTCATGGG others(30): Show |
C | upstream_gene_variant | MODIFIER | HG02257.hp2 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0000 | 1 | 418 | 0.0024 | -37 | c.-42 others(48): Show |
S1PR4 | ENSG00000125910.6 | transcript | ENST00000246115.5 | protein_coding | 4250 | chr19 | TogoVar | ||||||
SANBR_chr2_61060871_61129280 | 61127542 | ACCACTGC others(30): Show |
A | downstream_gene_variant | MODIFIER | HG01943.hp1 | a0001 | a0001c0002 | a0001c0002t0003 | a0001c0002t0003g0268 | 1 | 346 | 0.0029 | -37 | c.*53 others(48): Show |
SANBR | ENSG00000162929.14 | transcript | ENST00000402291.6 | protein_coding | 3263 | chr2 | TogoVar | ||||||
SASH1_chr6_148337838_148557044 | 148387583 | TCTTTCTT others(30): Show |
T | intron_variant | MODIFIER | HG02683.hp2 | a0001 | a0001c0001 | a0001c0001t0034 | a0001c0001t0034g0225 | 1 | 322 | 0.0031 | -37 | c.157 others(54): Show |
SASH1 | ENSG00000111961.19 | transcript | ENST00000367467.8 | protein_coding | 1/19 | chr6 | TogoVar | ||||||
SBK2_chr19_55523611_55542133 | 55530501 | AGGCCTAG others(30): Show |
A | intron_variant | MODIFIER | HG02572.hp2 HG03098.hp1 |
a0001 | a0001c0001a0001c0019 | a0001c0001t0012a0001c0019t0035 | a0001c0001t0012g0147a0001c0019t0035g0168 | 2 | 434 | 0.0046 | -37 | c.457 others(52): Show |
SBK2 | ENSG00000187550.9 | transcript | ENST00000413299.6 | protein_coding | 3/3 | chr19 | TogoVar | ||||||
SBK2_chr19_55523611_55542133 | 55530579 | TTAGTGTG others(30): Show |
T | intron_variant | MODIFIER | HG00558.hp2 HG01123.hp2 HG01261.hp1 others(14): Show |
a0000a0001a0003 | a0000c0025a0001c0001a0001c0004others(1): Show | a0000c0025t0004a0001c0001t0016a0001c0004t0004others(3): Show | a0000c0025t0004g0131a0001c0001t0016g0047a0001c0001t0016g0122others(8): Show | 17 | 434 | 0.0392 | -37 | c.457 others(52): Show |
SBK2 | ENSG00000187550.9 | transcript | ENST00000413299.6 | protein_coding | 3/3 | chr19 | TogoVar | ||||||
SBK2_chr19_55523611_55542133 | 55530758 | CGTGAGGC others(30): Show |
C | intron_variant | MODIFIER | HG01109.hp1 | a0001 | a0001c0018 | a0001c0018t0004 | a0001c0018t0004g0229 | 1 | 434 | 0.0023 | -37 | c.456 others(52): Show |
SBK2 | ENSG00000187550.9 | transcript | ENST00000413299.6 | protein_coding | 3/3 | chr19 | TogoVar | ||||||
SBK2_chr19_55523611_55542133 | 55537499 | GCCCCCAG others(30): Show |
G | upstream_gene_variant | MODIFIER | NA19083.hp1 | a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0017 | 1 | 434 | 0.0023 | -37 | c.-48 others(46): Show |
SBK2 | ENSG00000187550.9 | transcript | ENST00000413299.6 | protein_coding | 367 | chr19 | TogoVar | ||||||
SBK2_chr19_55523611_55542133 | 55537635 | CAGGAATT others(30): Show |
C | upstream_gene_variant | MODIFIER | NA18940.hp1 NA18960.hp2 NA18994.hp1 others(3): Show |
a0002 | a0002c0002a0002c0012 | a0002c0002t0003a0002c0012t0003 | a0002c0002t0003g0025a0002c0002t0003g0269a0002c0002t0003g0270others(1): Show | 6 | 434 | 0.0138 | -37 | c.-62 others(46): Show |
SBK2 | ENSG00000187550.9 | transcript | ENST00000413299.6 | protein_coding | 503 | chr19 | TogoVar | ||||||
SBK3_chr19_55535656_55550543 | 55537499 | GCCCCCAG others(30): Show |
G | downstream_gene_variant | MODIFIER | NA19083.hp2 | a0002 | a0002c0003 | a0002c0003t0001 | a0002c0003t0001g0004 | 1 | 438 | 0.0023 | -37 | c.*33 others(48): Show |
SBK3 | ENSG00000231274.5 | transcript | ENST00000612221.1 | protein_coding | 3156 | chr19 | TogoVar | ||||||
SBK3_chr19_55535656_55550543 | 55537635 | CAGGAATT others(30): Show |
C | downstream_gene_variant | MODIFIER | NA18960.hp2 NA18994.hp2 NA19004.hp2 others(3): Show |
a0001a0006 | a0001c0002a0006c0014 | a0001c0002t0001a0006c0014t0001 | a0001c0002t0001g0002a0001c0002t0001g0031a0006c0014t0001g0064 | 6 | 438 | 0.0137 | -37 | c.*31 others(48): Show |
SBK3 | ENSG00000231274.5 | transcript | ENST00000612221.1 | protein_coding | 3020 | chr19 | TogoVar | ||||||
SBK3_chr19_55535656_55550543 | 55547051 | CCTCCCTC others(30): Show |
C | upstream_gene_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(182): Show |
a0001a0002a0005others(3): Show | a0001c0001a0001c0002a0001c0009others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0002t0001others(7): Show | a0001c0001t0001g0001a0001c0001t0001g0005a0001c0001t0001g0008others(29): Show | 185 | 438 | 0.4224 | -37 | c.-15 others(48): Show |
SBK3 | ENSG00000231274.5 | transcript | ENST00000612221.1 | protein_coding | 1509 | chr19 | TogoVar | ||||||
SBNO2_chr19_1102638_1179268 | 1110538 | TGTTCCCA others(30): Show |
T | intron_variant | MODIFIER | HG02559.hp1 HG04228.hp2 |
a0001 | a0001c0001a0001c0018 | a0001c0001t0001a0001c0018t0001 | a0001c0001t0001g0023a0001c0018t0001g0154 | 2 | 203 | 0.0099 | -37 | c.302 others(54): Show |
SBNO2 | ENSG00000064932.16 | transcript | ENST00000361757.8 | protein_coding | 26/31 | chr19 | TogoVar | ||||||
SBNO2_chr19_1102638_1179268 | 1148663 | CCCTCCTT others(30): Show |
C | intron_variant | MODIFIER | HG01257.hp1 HG01257.hp2 HG01884.hp1 others(13): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0006others(3): Show | a0001c0001t0001a0001c0002t0001a0001c0006t0001others(5): Show | a0001c0001t0001g0055a0001c0001t0001g0057a0001c0001t0001g0065others(13): Show | 16 | 203 | 0.0788 | -37 | c.167 others(52): Show |
SBNO2 | ENSG00000064932.16 | transcript | ENST00000361757.8 | protein_coding | 3/31 | chr19 | TogoVar | ||||||
SBNO2_chr19_1102638_1179268 | 1148700 | TCCTCCTT others(30): Show |
T | intron_variant | MODIFIER | HG01074.hp2 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0066 | 1 | 203 | 0.0049 | -37 | c.167 others(52): Show |
SBNO2 | ENSG00000064932.16 | transcript | ENST00000361757.8 | protein_coding | 3/31 | chr19 | TogoVar | ||||||
SCAF8_chr6_154728416_154839221 | 154788226 | CTGTGTTA others(30): Show |
C | intron_variant | MODIFIER | NA18986.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0165 | 1 | 282 | 0.0036 | -37 | c.321 others(52): Show |
SCAF8 | ENSG00000213079.10 | transcript | ENST00000367178.8 | protein_coding | 4/19 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
SCAPER_chr15_76342904_76910340 | 76899750 | TGTGAGGA others(30): Show |
T | intron_variant | MODIFIER | HG01243.hp2 | a0013 | a0013c0021 | a0013c0021t0001 | a0013c0021t0001g0197 | 1 | 312 | 0.0032 | -37 | c.-60 others(54): Show |
SCAPER | ENSG00000140386.13 | transcript | ENST00000563290.6 | protein_coding | 1/31 | chr15 | TogoVar | ||||||
SCARF1_chr17_1628858_1650732 | 1645534 | CCGCATCA others(30): Show |
C | intron_variant | MODIFIER | HG03579.hp2 NA18960.hp1 NA18969.hp2 others(3): Show |
a0001a0013 | a0001c0001a0013c0042 | a0001c0001t0001a0013c0042t0003 | a0001c0001t0001g0015a0001c0001t0001g0053a0001c0001t0001g0054others(1): Show | 6 | 401 | 0.0150 | -37 | c.101 others(50): Show |
SCARF1 | ENSG00000074660.17 | transcript | ENST00000263071.9 | protein_coding | 1/10 | chr17 | TogoVar | ||||||
SCART1_chr10_133448945_133474760 | 133472755 | TGAAAGTG others(30): Show |
T | downstream_gene_variant | MODIFIER | NA18975.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0016 | 1 | 434 | 0.0023 | -37 | c.*47 others(48): Show |
SCART1 | ENSG00000214279.13 | transcript | ENST00000640237.2 | protein_coding | 2996 | chr10 | TogoVar | ||||||
SCART1_chr10_133448945_133474760 | 133472792 | GGAAAGTG others(30): Show |
G | downstream_gene_variant | MODIFIER | HG02717.hp1 | a0023 | a0023c0049 | a0023c0049t0004 | a0023c0049t0004g0169 | 1 | 434 | 0.0023 | -37 | c.*48 others(48): Show |
SCART1 | ENSG00000214279.13 | transcript | ENST00000640237.2 | protein_coding | 3033 | chr10 | TogoVar | ||||||
SCFD1_chr14_30617319_30740850 | 30713356 | TAAAAACC others(30): Show |
T | intron_variant | MODIFIER | HG02109.hp2 HG02145.hp1 HG02451.hp1 others(10): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002a0001c0001t0001g0003a0001c0001t0001g0004others(10): Show | 13 | 328 | 0.0396 | -37 | c.163 others(56): Show |
SCFD1 | ENSG00000092108.22 | transcript | ENST00000458591.7 | protein_coding | 19/24 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | |||||
SCFD2_chr4_52867982_53371061 | 53256248 | CGGGGCAG others(30): Show |
C | intron_variant | MODIFIER | HG00423.hp1 HG01358.hp1 HG02004.hp2 others(23): Show |
a0001a0003 | a0001c0001a0001c0003a0001c0004others(3): Show | a0001c0001t0001a0001c0001t0004a0001c0003t0003others(8): Show | a0001c0001t0001g0008a0001c0001t0001g0010a0001c0001t0001g0011others(23): Show | 26 | 162 | 0.1605 | -37 | c.131 others(58): Show |
SCFD2 | ENSG00000184178.17 | transcript | ENST00000401642.8 | protein_coding | 4/8 | chr4 | TogoVar | ||||||
SCGB1C2_chr17_132569_144067 | 136362 | CCCTAACC others(30): Show |
C | upstream_gene_variant | MODIFIER | HG01168.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | 1 | 402 | 0.0025 | -37 | c.-12 others(48): Show |
SCGB1C2 | ENSG00000268320.4 | transcript | ENST00000595228.4 | protein_coding | 1206 | chr17 | TogoVar | ||||||
SCML4_chr6_107697154_107829313 | 107778205 | AAAAAAAA others(30): Show |
A | intron_variant | MODIFIER | HG03041.hp1 | a0001 | a0001c0001 | a0001c0001t0019 | a0001c0001t0019g0075 | 1 | 250 | 0.0040 | -37 | c.-59 others(54): Show |
SCML4 | ENSG00000146285.15 | transcript | ENST00000369020.8 | protein_coding | 1/7 | chr6 | TogoVar |