Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
SLC2A8_chr9_127392169_127412898	127409051	TGGGGAGG others(31): Show TGGGGAGGTAGGGGGAGATGATGGGGAGGTGGGGGAGAC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18998.hp2 NA18998.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0001 a0001c0001t0002g0001	1	418	0.0024	-38	c.18 others(49): Show c.1803_*1840delGGGGAGGTAGGGGGAGATGATGGGGAGGTGGGGG AGAC	SLC2A8	ENSG00000136856.18	transcript	ENST00000373371.8	protein_coding		1154		chr9	TogoVar
SLC30A10_chr1_219905445_219933557	219922176	GTTTTTTT others(31): Show GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00280.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0389 a0001c0001t0006g0389	1	426	0.0024	-38	c.719 others(55): Show c.719-3720_719-3683delAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAA	SLC30A10	ENSG00000196660.12	transcript	ENST00000366926.4	protein_coding	2/3			chr1	TogoVar
SLC35B3_chr6_8406435_8440545	8438839	CTTTCTCT others(31): Show CTTTCTCTTTCTCTTCCTTCCTTCCTTTTTCTTTTTCTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02622.hp1 HG02630.hp1 NA18522.hp2 HG02622.hp1 HG02630.hp1 NA18522.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0017 a0001c0001t0001 a0001c0002t0017	a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0002t0017g0080 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0002t0017g0080	3	412	0.0073	-38	c.-36 others(49): Show c.-3628_-3591delAAGAAAAAGAAAAAGGAAGGAAGGAAGAGAAAGA GAAA	SLC35B3	ENSG00000124786.13	transcript	ENST00000710437.1	protein_coding		3295		chr6	TogoVar
SLC35F2_chr11_107785991_107863787	107818078	AAGAAAGA others(31): Show AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	A A	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG02486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0021 a0001c0001t0006g0021	1	342	0.0029	-38	c.111 others(55): Show c.111-2151_111-2114delCTTTCTTTCTTTCTTTCTTTCTTTCTTT CTTTCTTTCT	SLC35F2	ENSG00000110660.15	transcript	ENST00000525815.6	protein_coding	1/7			chr11	TogoVar
SLC38A2_chr12_46353188_46377773	46373998	CCAAACCT others(31): Show CCAAACCTTCTACTCTGTTCAGGCCAGTCTTCCCTACCG	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03098.hp1 HG03098.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0002	1	404	0.0025	-38	c.-16 others(49): Show c.-1614_-1577delCGGTAGGGAAGACTGGCCTGAACAGAGTAGAAGG TTTG	SLC38A2	ENSG00000134294.14	transcript	ENST00000256689.10	protein_coding		1226		chr12	TogoVar
SLC39A8_chr4_102256666_102350482	102350130	TATATATA others(31): Show TATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGAG	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01109.hp2 HG02486.hp1 HG02895.hp1 others(5): Show HG01109.hp2 HG02486.hp1 HG02895.hp1 HG02922.hp1 HG03041.hp2 HG03139.hp2 HG06807.hp1 NA18522.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0001 a0001c0001t0003 a0001c0001t0004	a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0142 others(3): Show a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0142 a0001c0001t0003g0144 a0001c0001t0004g0033 a0001c0001t0004g0034	8	266	0.0301	-38	c.-50 others(49): Show c.-5077_-5040delCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATAT ATAT	SLC39A8	ENSG00000138821.14	transcript	ENST00000356736.5	protein_coding		4649		chr4	TogoVar
SLC39A8_chr4_102256666_102350482	102350132	TATATATA others(31): Show TATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00735.hp2 HG02572.hp2 HG02622.hp1 others(2): Show HG00735.hp2 HG02572.hp2 HG02622.hp1 HG03486.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0001t0001 a0001c0001t0004 a0001c0001t0005	a0001c0001t0001g0070 a0001c0001t0001g0143 a0001c0001t0004g0032 others(2): Show a0001c0001t0001g0070 a0001c0001t0001g0143 a0001c0001t0004g0032 a0001c0001t0004g0139 a0001c0001t0005g0141	5	266	0.0188	-38	c.-50 others(49): Show c.-5079_-5042delCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATAT ATAT	SLC39A8	ENSG00000138821.14	transcript	ENST00000356736.5	protein_coding		4651		chr4	TogoVar
SLC44A1_chr9_105239651_105402346	105351556	GAGAGAAA others(31): Show GAGAGAAAGAGAGAAAGAGAGAAAGAGAGAAAGAGAGAA	G G	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02572.hp2 HG02486.hp2 HG02572.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0012 a0002c0002t0021 a0002c0002t0012 a0002c0002t0021	a0002c0002t0012g0049 a0002c0002t0021g0116 a0002c0002t0012g0049 a0002c0002t0021g0116	2	142	0.0141	-38	c.500 others(55): Show c.500+3115_500+3152delGAGAAAGAGAGAAAGAGAGAAAGAGAGA AAGAGAAAGA	SLC44A1	ENSG00000070214.17	transcript	ENST00000374720.8	protein_coding	5/15		INFO_REALIGN_3_PRIME	chr9	TogoVar
SLC44A1_chr9_105239651_105402346	105351582	GAGAAAGA others(31): Show GAGAAAGAGAGAAAGAGAAAGAAAGAAAGAAAGAAAGAA	G G	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01884.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0079 a0002c0002t0079	a0002c0002t0079g0135 a0002c0002t0079g0135	1	142	0.0070	-38	c.500 others(55): Show c.500+3135_500+3172delAAGAGAGAAAGAGAAAGAAAGAAAGAAA GAAAGAAAGA	SLC44A1	ENSG00000070214.17	transcript	ENST00000374720.8	protein_coding	5/15		INFO_REALIGN_3_PRIME	chr9	TogoVar
SLC44A5_chr1_75197129_75616114	75330144	CATATACG others(31): Show CATATACGTATATGCATATATATACGTATATATGCATAT	C C	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG01891.hp1 HG01978.hp1 others(9): Show HG00639.hp1 HG01891.hp1 HG01978.hp1 HG02280.hp1 HG02615.hp1 HG02896.hp2 HG02922.hp1 HG02965.hp1 HG03486.hp1 HG03540.hp1 HG04184.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(2): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0006	a0001c0001t0001 a0001c0001t0003 a0001c0002t0001 others(7): Show a0001c0001t0001 a0001c0001t0003 a0001c0002t0001 a0001c0002t0002 a0001c0002t0004 a0001c0003t0001 a0001c0005t0001 a0001c0005t0006 a0001c0006t0001 a0001c0006t0004	a0001c0001t0001g0010 a0001c0001t0001g0019 a0001c0001t0003g0144 others(9): Show a0001c0001t0001g0010 a0001c0001t0001g0019 a0001c0001t0003g0144 a0001c0002t0001g0076 a0001c0002t0002g0147 a0001c0002t0004g0016 a0001c0003t0001g0130 a0001c0003t0001g0151 a0001c0005t0001g0074 a0001c0005t0006g0066 a0001c0006t0001g0041 a0001c0006t0004g0012	12	156	0.0769	-38	c.101 others(55): Show c.101+9400_101+9437delATATGCATATATACGTATATATATGCAT ATACGTATAT	SLC44A5	ENSG00000137968.17	transcript	ENST00000370859.8	protein_coding	4/23			chr1	TogoVar
SLC45A4_chr8_141202174_141313288	141252577	GTGTCTGT others(31): Show GTGTCTGTGAATTTCCGTGTTTTCATGCCCACCTGTGCA	G G	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00280.hp1 HG00323.hp2 others(24): Show HG00099.hp1 HG00280.hp1 HG00323.hp2 HG00738.hp2 HG01167.hp2 HG01169.hp1 HG01433.hp1 HG01934.hp1 HG01978.hp1 HG02015.hp1 HG02572.hp2 HG02647.hp1 HG02735.hp2 HG03239.hp2 HG03688.hp1 HG06807.hp2 NA18944.hp1 NA18960.hp1 NA18968.hp2 NA18970.hp2 NA18973.hp2 NA18994.hp1 NA19043.hp2 NA19055.hp1 NA19057.hp2 NA19088.hp1 NA20129.hp1	a0001 a0003 a0004 a0001 a0003 a0004	a0001c0003 a0001c0004 a0001c0010 others(6): Show a0001c0003 a0001c0004 a0001c0010 a0001c0015 a0001c0016 a0003c0002 a0003c0011 a0003c0012 a0004c0007	a0001c0003t0001 a0001c0003t0003 a0001c0004t0006 others(11): Show a0001c0003t0001 a0001c0003t0003 a0001c0004t0006 a0001c0004t0046 a0001c0010t0001 a0001c0015t0002 a0001c0016t0016 a0003c0002t0002 a0003c0002t0017 a0003c0002t0019 a0003c0002t0022 a0003c0011t0002 a0003c0012t0017 a0004c0007t0008	a0001c0003t0001g0052 a0001c0003t0003g0165 a0001c0003t0003g0168 others(23): Show a0001c0003t0001g0052 a0001c0003t0003g0165 a0001c0003t0003g0168 a0001c0004t0006g0049 a0001c0004t0006g0099 a0001c0004t0006g0101 a0001c0004t0046g0167 a0001c0010t0001g0148 a0001c0015t0002g0042 a0001c0015t0002g0100 a0001c0016t0016g0001 a0003c0002t0002g0023 a0003c0002t0002g0041 a0003c0002t0002g0044 a0003c0002t0002g0045 a0003c0002t0002g0046 a0003c0002t0002g0047 a0003c0002t0002g0054 a0003c0002t0002g0069 a0003c0002t0002g0102 a0003c0002t0017g0172 a0003c0002t0019g0034 a0003c0002t0022g0053 a0003c0011t0002g0050 a0003c0012t0017g0177 a0004c0007t0008g0028	27	188	0.1436	-38	c.241 others(55): Show c.241+1374_241+1411delTGCACAGGTGGGCATGAAAACACGGAAA TTCACAGACA	SLC45A4	ENSG00000022567.10	transcript	ENST00000517878.6	protein_coding	2/8			chr8	TogoVar
SLC5A10_chr17_18947165_19027565	19025045	TATATCCT others(31): Show TATATCCTCTCCGATGAAGCAAGCAGGCCCCTTTCTCTC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19011.hp2 NA19011.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0299 a0001c0001t0001g0299	1	354	0.0028	-38	c.46 others(49): Show c.4615_*4652delATATCCTCTCCGATGAAGCAAGCAGGCCCCTTTC TCTC	SLC5A10	ENSG00000154025.16	transcript	ENST00000395645.4	protein_coding		2481		chr17	TogoVar
SLC5A4_chr22_32213464_32260347	32239518	TTATATAT others(31): Show TTATATATATATATATATATATATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG03927.hp2 NA20300.hp2 HG03927.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0108 a0001c0001t0001g0219 a0001c0001t0001g0108 a0001c0001t0001g0219	2	302	0.0066	-38	c.478 others(53): Show c.478-466_478-429delTATATATATATATATATATATATATATATA TATATATA	SLC5A4	ENSG00000100191.6	transcript	ENST00000266086.6	protein_coding	5/14			chr22	TogoVar
SLC5A4_chr22_32213464_32260347	32239560	ATATATAT others(31): Show ATATATATATTTATATATATATTTATATATATATAAATT	A A	intron_variant intron_variant	MODIFIER	HG02129.hp1 HG02129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0109 a0001c0001t0001g0109	1	302	0.0033	-38	c.478 others(53): Show c.478-508_478-471delAATTTATATATATATAAATATATATATAAA TATATATA	SLC5A4	ENSG00000100191.6	transcript	ENST00000266086.6	protein_coding	5/14			chr22	TogoVar
SLC5A8_chr12_101150493_101215238	101158574	CTCTCTCT others(31): Show CTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATA	C C	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02451.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0113 a0001c0001t0006g0113	1	375	0.0027	-38	c.163 others(55): Show c.1631-284_1631-247delTATATATATATATAGAGAGAGAGAGAGA GAGAGAGAGA	SLC5A8	ENSG00000256870.3	transcript	ENST00000536262.3	protein_coding	13/14			chr12	TogoVar
SLC66A1_chr1_19307326_19334300	19323460	GCAGTGGT others(31): Show GCAGTGGTGTGATCTCGGCTTACTGCAACCTCCACCTCC	G G	intron_variant intron_variant	MODIFIER	NA19089.hp2 NA19089.hp2	a0006 a0006	a0006c0012 a0006c0012	a0006c0012t0003 a0006c0012t0003	a0006c0012t0003g0254 a0006c0012t0003g0254	1	456	0.0022	-38	c.165 others(55): Show c.165-1172_165-1135delCAGTGGTGTGATCTCGGCTTACTGCAAC CTCCACCTCC	SLC66A1	ENSG00000040487.13	transcript	ENST00000375153.8	protein_coding	2/7			chr1	TogoVar
SLC66A2_chr18_79897420_79956653	79919484	TGAGAGGT others(31): Show TGAGAGGTCAAGGTCAGTGGGGAGAGACAGGAACCGAGG	T T	intron_variant intron_variant	MODIFIER	HG01074.hp1 HG02486.hp2 HG02895.hp1 others(3): Show HG01074.hp1 HG02486.hp2 HG02895.hp1 HG03130.hp2 NA19240.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0002 a0001c0003t0002 a0001c0001t0002 a0001c0003t0002	a0001c0001t0002g0155 a0001c0001t0002g0156 a0001c0001t0002g0158 others(3): Show a0001c0001t0002g0155 a0001c0001t0002g0156 a0001c0001t0002g0158 a0001c0001t0002g0159 a0001c0001t0002g0162 a0001c0003t0002g0157	6	352	0.0171	-38	c.392 others(52): Show c.392-122_392-85delCCTCGGTTCCTGTCTCTCCCCACTGACCTTG ACCTCTC	SLC66A2	ENSG00000122490.19	transcript	ENST00000397778.7	protein_coding	4/5			chr18	TogoVar
SLC66A2_chr18_79897420_79956653	79919618	AGGAGAGA others(31): Show AGGAGAGACAGGAACCGAGGGAGAGGTCAAGGTCAGTGG	A A	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02109.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0225 a0001c0001t0002g0225	1	352	0.0028	-38	c.392 others(53): Show c.392-256_392-219delCCACTGACCTTGACCTCTCCCTCGGTTCCT GTCTCTCC	SLC66A2	ENSG00000122490.19	transcript	ENST00000397778.7	protein_coding	4/5			chr18	TogoVar
SLC66A2_chr18_79897420_79956653	79919694	GGGAGAGA others(31): Show GGGAGAGACAGGAACCGAGGGAGAGGTCAAGGTCAGTGA	G G	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02897.hp1 HG02896.hp2 HG02897.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0218 a0001c0001t0002g0219 a0001c0001t0002g0218 a0001c0001t0002g0219	2	352	0.0057	-38	c.392 others(53): Show c.392-332_392-295delTCACTGACCTTGACCTCTCCCTCGGTTCCT GTCTCTCC	SLC66A2	ENSG00000122490.19	transcript	ENST00000397778.7	protein_coding	4/5			chr18	TogoVar
SLC66A2_chr18_79897420_79956653	79920608	GGAGGAGA others(31): Show GGAGGAGAGACAGGAACCGAGGGAGAGGTCAAGGTCAGT	G G	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG02027.hp2 HG02155.hp2 others(1): Show HG00597.hp1 HG02027.hp2 HG02155.hp2 NA19088.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0009 a0001c0001t0004 a0001c0001t0009	a0001c0001t0004g0132 a0001c0001t0004g0133 a0001c0001t0004g0134 others(1): Show a0001c0001t0004g0132 a0001c0001t0004g0133 a0001c0001t0004g0134 a0001c0001t0009g0130	4	352	0.0114	-38	c.392 others(55): Show c.392-1246_392-1209delACTGACCTTGACCTCTCCCTCGGTTCCT GTCTCTCCTC	SLC66A2	ENSG00000122490.19	transcript	ENST00000397778.7	protein_coding	4/5			chr18	TogoVar
SLC66A2_chr18_79897420_79956653	79920695	GGGAACCG others(31): Show GGGAACCGAGGGAGAGGTCAGGGTCAGTGAGGAGAGACA	G G	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG02027.hp2 HG04204.hp1 others(1): Show HG00423.hp2 HG02027.hp2 HG04204.hp1 NA18951.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0005 a0001c0001t0004 a0001c0001t0005	a0001c0001t0004g0004 a0001c0001t0004g0133 a0001c0001t0005g0203 a0001c0001t0004g0004 a0001c0001t0004g0133 a0001c0001t0005g0203	4	352	0.0114	-38	c.392 others(55): Show c.392-1333_392-1296delTGTCTCTCCTCACTGACCCTGACCTCTC CCTCGGTTCC	SLC66A2	ENSG00000122490.19	transcript	ENST00000397778.7	protein_coding	4/5			chr18	TogoVar
SLC66A2_chr18_79897420_79956653	79920820	GGAGAGGT others(31): Show GGAGAGGTCAAGGTCAGTGAGGAGAGACAGGAACCGAGT	G G	intron_variant intron_variant	MODIFIER	NA18969.hp2 NA19002.hp2 NA18969.hp2 NA19002.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0003 a0001c0001t0004g0122 a0001c0001t0004g0003 a0001c0001t0004g0122	2	352	0.0057	-38	c.392 others(55): Show c.392-1458_392-1421delACTCGGTTCCTGTCTCTCCTCACTGACC TTGACCTCTC	SLC66A2	ENSG00000122490.19	transcript	ENST00000397778.7	protein_coding	4/5			chr18	TogoVar
SLC66A2_chr18_79897420_79956653	79920848	AGGAACCG others(31): Show AGGAACCGAGTGAGAGGTCAAGGTCAGTGAGGAGAGACG	A A	intron_variant intron_variant	MODIFIER	HG00438.hp1 NA18947.hp1 NA18991.hp2 HG00438.hp1 NA18947.hp1 NA18991.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0009 a0001c0001t0004 a0001c0001t0009	a0001c0001t0004g0121 a0001c0001t0004g0166 a0001c0001t0009g0265 a0001c0001t0004g0121 a0001c0001t0004g0166 a0001c0001t0009g0265	3	352	0.0085	-38	c.392 others(55): Show c.392-1486_392-1449delCGTCTCTCCTCACTGACCTTGACCTCTC ACTCGGTTCC	SLC66A2	ENSG00000122490.19	transcript	ENST00000397778.7	protein_coding	4/5			chr18	TogoVar
SLC66A2_chr18_79897420_79956653	79920952	TGAGGAGA others(31): Show TGAGGAGAGACGGGAACCGAGGGAGAGGTCAGGGTCAGA	T T	intron_variant intron_variant	MODIFIER	HG02738.hp2 HG04184.hp2 HG02738.hp2 HG04184.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0236 a0001c0001t0006g0254 a0001c0001t0006g0236 a0001c0001t0006g0254	2	352	0.0057	-38	c.392 others(55): Show c.392-1590_392-1553delTCTGACCCTGACCTCTCCCTCGGTTCCC GTCTCTCCTC	SLC66A2	ENSG00000122490.19	transcript	ENST00000397778.7	protein_coding	4/5			chr18	TogoVar
SLC66A2_chr18_79897420_79956653	79920991	GGAGGAGA others(31): Show GGAGGAGAGACAGGAACCGAGGGAGAGGTCAAGCTCAGT	G G	intron_variant intron_variant	MODIFIER	HG02155.hp2 NA18966.hp1 NA18999.hp1 others(2): Show HG02155.hp2 NA18966.hp1 NA18999.hp1 NA19054.hp1 NA19067.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0009 a0001c0001t0017 a0001c0001t0004 a0001c0001t0009 a0001c0001t0017	a0001c0001t0004g0251 a0001c0001t0009g0130 a0001c0001t0017g0167 others(2): Show a0001c0001t0004g0251 a0001c0001t0009g0130 a0001c0001t0017g0167 a0001c0001t0017g0245 a0001c0001t0017g0252	5	352	0.0142	-38	c.392 others(55): Show c.392-1629_392-1592delACTGAGCTTGACCTCTCCCTCGGTTCCT GTCTCTCCTC	SLC66A2	ENSG00000122490.19	transcript	ENST00000397778.7	protein_coding	4/5			chr18	TogoVar
SLC66A2_chr18_79897420_79956653	79921062	GTCAGTGA others(31): Show GTCAGTGAGGAGAGACAGGAACCGAGTGAGAGGTCAAGC	G G	intron_variant intron_variant	MODIFIER	HG03139.hp2 HG03139.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0223 a0001c0001t0002g0223	1	352	0.0028	-38	c.392 others(55): Show c.392-1700_392-1663delGCTTGACCTCTCACTCGGTTCCTGTCTC TCCTCACTGA	SLC66A2	ENSG00000122490.19	transcript	ENST00000397778.7	protein_coding	4/5			chr18	TogoVar
SLC66A2_chr18_79897420_79956653	79921230	AGGAACCG others(31): Show AGGAACCGAGGGAGAGGTCAAGGTCAGTGAGGAGAGACG	A A	intron_variant intron_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0203 a0001c0001t0005g0203	1	352	0.0028	-38	c.392 others(55): Show c.392-1868_392-1831delCGTCTCTCCTCACTGACCTTGACCTCTC CCTCGGTTCC	SLC66A2	ENSG00000122490.19	transcript	ENST00000397778.7	protein_coding	4/5			chr18	TogoVar
SLC66A2_chr18_79897420_79956653	79921295	TGAGGAGA others(31): Show TGAGGAGAGACAGGAACCGAGGGAGAGGTCAGGGTCAGA	T T	intron_variant intron_variant	MODIFIER	HG02080.hp1 HG02080.hp1	a0004 a0004	a0004c0002 a0004c0002	a0004c0002t0006 a0004c0002t0006	a0004c0002t0006g0255 a0004c0002t0006g0255	1	352	0.0028	-38	c.392 others(55): Show c.392-1933_392-1896delTCTGACCCTGACCTCTCCCTCGGTTCCT GTCTCTCCTC	SLC66A2	ENSG00000122490.19	transcript	ENST00000397778.7	protein_coding	4/5			chr18	TogoVar
SLC66A2_chr18_79897420_79956653	79921564	GGAGGAGA others(31): Show GGAGGAGAGACAGGAACCGAGGGAGAGGTCAAGCTCAGT	G G	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01081.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0023 a0001c0001t0023	a0001c0001t0023g0336 a0001c0001t0023g0336	1	352	0.0028	-38	c.392 others(55): Show c.392-2202_392-2165delACTGAGCTTGACCTCTCCCTCGGTTCCT GTCTCTCCTC	SLC66A2	ENSG00000122490.19	transcript	ENST00000397778.7	protein_coding	4/5			chr18	TogoVar
SLC66A2_chr18_79897420_79956653	79921597	CTCAGTGA others(31): Show CTCAGTGAGGAGAGACAGGAACCGAGGGAGAGGTCAAGG	C C	intron_variant intron_variant	MODIFIER	HG01074.hp1 HG02486.hp2 HG02895.hp1 others(3): Show HG01074.hp1 HG02486.hp2 HG02895.hp1 HG03130.hp2 NA19240.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0002 a0001c0003t0002 a0001c0001t0002 a0001c0003t0002	a0001c0001t0002g0155 a0001c0001t0002g0156 a0001c0001t0002g0158 others(3): Show a0001c0001t0002g0155 a0001c0001t0002g0156 a0001c0001t0002g0158 a0001c0001t0002g0159 a0001c0001t0002g0162 a0001c0003t0002g0157	6	352	0.0171	-38	c.392 others(55): Show c.392-2235_392-2198delCCTTGACCTCTCCCTCGGTTCCTGTCTC TCCTCACTGA	SLC66A2	ENSG00000122490.19	transcript	ENST00000397778.7	protein_coding	4/5			chr18	TogoVar
SLC66A2_chr18_79897420_79956653	79921650	CAGGAACC others(31): Show CAGGAACCGAGTGAGAGGTCAAGCTCAGTGGGGAGAGAT	C C	intron_variant intron_variant	MODIFIER	HG02135.hp2 HG02135.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0067 a0001c0001t0001g0067	1	352	0.0028	-38	c.392 others(55): Show c.392-2288_392-2251delATCTCTCCCCACTGAGCTTGACCTCTCA CTCGGTTCCT	SLC66A2	ENSG00000122490.19	transcript	ENST00000397778.7	protein_coding	4/5			chr18	TogoVar
SLC6A18_chr5_1220381_1251189	1238487	TGGAGGAC others(31): Show TGGAGGACTCAGGAAAGACATCAGGTTTGGAGTGAGCCA	T T	intron_variant intron_variant	MODIFIER	HG02717.hp2 HG02723.hp2 HG02738.hp2 others(17): Show HG02717.hp2 HG02723.hp2 HG02738.hp2 HG02970.hp2 HG03225.hp2 HG03942.hp1 HG04199.hp2 NA18939.hp2 NA18940.hp1 NA18948.hp1 NA18954.hp2 NA18959.hp2 NA18973.hp2 NA18981.hp2 NA18993.hp2 NA18995.hp1 NA18997.hp1 NA19012.hp2 NA19081.hp2 NA19240.hp1	a0001 a0003 a0006 others(1): Show a0001 a0003 a0006 a0008	a0001c0002 a0001c0005 a0003c0004 others(2): Show a0001c0002 a0001c0005 a0003c0004 a0006c0048 a0008c0015	a0001c0002t0002 a0001c0005t0002 a0003c0004t0001 others(2): Show a0001c0002t0002 a0001c0005t0002 a0003c0004t0001 a0006c0048t0004 a0008c0015t0004	a0001c0002t0002g0153 a0001c0002t0002g0283 a0001c0002t0002g0286 others(12): Show a0001c0002t0002g0153 a0001c0002t0002g0283 a0001c0002t0002g0286 a0001c0005t0002g0005 a0001c0005t0002g0006 a0001c0005t0002g0025 a0001c0005t0002g0117 a0001c0005t0002g0119 a0001c0005t0002g0120 a0003c0004t0001g0300 a0003c0004t0001g0319 a0003c0004t0001g0385 a0006c0048t0004g0229 a0008c0015t0004g0254 a0008c0015t0004g0255	20	456	0.0439	-38	c.732 others(53): Show c.732+430_732+467delAGGACTCAGGAAAGACATCAGGTTTGGAGT GAGCCAGG	SLC6A18	ENSG00000164363.10	transcript	ENST00000324642.4	protein_coding	5/11		INFO_REALIGN_3_PRIME	chr5	TogoVar
SLC6A18_chr5_1220381_1251189	1238604	CCTCAGGA others(31): Show CCTCAGGAAAGAGGTCAGGTTTGGAGTGAGCCTGGAGGA	C C	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00323.hp2 HG01069.hp2 others(6): Show HG00280.hp1 HG00323.hp2 HG01069.hp2 HG01071.hp2 HG01255.hp2 NA18950.hp1 NA18991.hp2 NA19004.hp2 NA19090.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0002c0001 a0002c0025 a0001c0002 a0002c0001 a0002c0025	a0001c0002t0002 a0002c0001t0001 a0002c0025t0001 a0001c0002t0002 a0002c0001t0001 a0002c0025t0001	a0001c0002t0002g0015 a0001c0002t0002g0059 a0001c0002t0002g0322 others(3): Show a0001c0002t0002g0015 a0001c0002t0002g0059 a0001c0002t0002g0322 a0002c0001t0001g0010 a0002c0001t0001g0317 a0002c0025t0001g0140	9	456	0.0197	-38	c.732 others(53): Show c.732+572_732+609delAGCCTGGAGGACTCAGGAAAGAGGTCAGGT TTGGAGTG	SLC6A18	ENSG00000164363.10	transcript	ENST00000324642.4	protein_coding	5/11		INFO_REALIGN_3_PRIME	chr5	TogoVar
SLC6A3_chr5_1387794_1450440	1414453	GCAGGGCG others(31): Show GCAGGGCGGGGAAGGCGCTGGGTGGGGGGCCTGGAGGGT	G G	intron_variant intron_variant	MODIFIER	HG04115.hp2 HG04115.hp2	a0001 a0001	a0001c0008 a0001c0008	a0001c0008t0007 a0001c0008t0007	a0001c0008t0007g0351 a0001c0008t0007g0351	1	373	0.0027	-38	c.115 others(55): Show c.1156+200_1156+237delACCCTCCAGGCCCCCCACCCAGCGCCTT CCCCGCCCTG	SLC6A3	ENSG00000142319.18	transcript	ENST00000270349.12	protein_coding	8/14			chr5	TogoVar
SLC6A3_chr5_1387794_1450440	1422374	AGTGCTGC others(31): Show AGTGCTGCCCAAGGTGCTGGGTGCCCACCGCTGCCCACG	A A	intron_variant intron_variant	MODIFIER	HG01496.hp2 HG02145.hp2 HG02572.hp2 others(4): Show HG01496.hp2 HG02145.hp2 HG02572.hp2 HG02896.hp2 HG03130.hp1 HG03139.hp1 NA20300.hp1	a0001 a0001	a0001c0005 a0001c0011 a0001c0018 a0001c0005 a0001c0011 a0001c0018	a0001c0005t0001 a0001c0005t0013 a0001c0005t0018 others(2): Show a0001c0005t0001 a0001c0005t0013 a0001c0005t0018 a0001c0011t0012 a0001c0018t0027	a0001c0005t0001g0027 a0001c0005t0001g0028 a0001c0005t0013g0031 others(4): Show a0001c0005t0001g0027 a0001c0005t0001g0028 a0001c0005t0013g0031 a0001c0005t0013g0032 a0001c0005t0018g0030 a0001c0011t0012g0033 a0001c0018t0027g0029	7	373	0.0188	-38	c.654 others(53): Show c.654-398_654-361delCGTGGGCAGCGGTGGGCACCCAGCACCTTG GGCAGCAC	SLC6A3	ENSG00000142319.18	transcript	ENST00000270349.12	protein_coding	4/14			chr5	TogoVar
SLC6A3_chr5_1387794_1450440	1422434	ACCCACCG others(31): Show ACCCACCGCTGCCCACAGTGCTGCCCACGCTGCTGGGTG	A A	intron_variant intron_variant	MODIFIER	HG02970.hp1 HG02970.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0005 a0001c0006t0005	a0001c0006t0005g0140 a0001c0006t0005g0140	1	373	0.0027	-38	c.654 others(53): Show c.654-458_654-421delCACCCAGCAGCGTGGGCAGCACTGTGGGCA GCGGTGGG	SLC6A3	ENSG00000142319.18	transcript	ENST00000270349.12	protein_coding	4/14			chr5	TogoVar
SLC7A1_chr13_29504414_29600688	29558532	AGGGGGAG others(31): Show AGGGGGAGAGAATGTGAGTGATGGGGAGAGAATGTGAGT	A A	intron_variant intron_variant	MODIFIER	HG02735.hp2 HG02735.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0277 a0001c0001t0002g0277	1	330	0.0030	-38	c.-11 others(57): Show c.-114-4710_-114-4673delACTCACATTCTCTCCCCATCACTCAC ATTCTCTCCCCC	SLC7A1	ENSG00000139514.13	transcript	ENST00000380752.10	protein_coding	1/12			chr13	TogoVar
SLC7A1_chr13_29504414_29600688	29558692	AGGGGGAG others(31): Show AGGGGGAGTGAATCTGAATGAGGGGGGAGTGAATGTGAG	A A	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00544.hp1 HG00733.hp2 others(26): Show HG00140.hp1 HG00544.hp1 HG00733.hp2 HG00741.hp1 HG01074.hp1 HG01106.hp2 HG01192.hp1 HG01256.hp2 HG01261.hp2 HG01346.hp2 HG01516.hp1 HG01934.hp2 HG02486.hp2 HG02615.hp1 HG02698.hp1 HG02818.hp1 HG03017.hp1 HG03491.hp2 HG04184.hp1 HG06807.hp2 NA18946.hp1 NA18981.hp1 NA19005.hp2 NA19007.hp2 NA20129.hp1 NA20752.hp1 NA20805.hp1 NA20805.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0006 a0001c0001 a0001c0006	a0001c0001t0001 a0001c0001t0003 a0001c0001t0008 others(3): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0008 a0001c0001t0035 a0001c0006t0001 a0001c0006t0029	a0001c0001t0001g0012 a0001c0001t0001g0065 a0001c0001t0001g0068 others(24): Show a0001c0001t0001g0012 a0001c0001t0001g0065 a0001c0001t0001g0068 a0001c0001t0001g0123 a0001c0001t0001g0127 a0001c0001t0001g0130 a0001c0001t0001g0204 a0001c0001t0001g0242 a0001c0001t0001g0247 a0001c0001t0001g0252 a0001c0001t0001g0253 a0001c0001t0001g0254 a0001c0001t0001g0255 a0001c0001t0001g0256 a0001c0001t0001g0257 a0001c0001t0001g0273 a0001c0001t0001g0278 a0001c0001t0001g0281 a0001c0001t0003g0067 a0001c0001t0008g0045 a0001c0001t0008g0051 a0001c0001t0008g0052 a0001c0001t0008g0059 a0001c0001t0035g0080 a0001c0006t0001g0009 a0001c0006t0001g0244 a0001c0006t0029g0046	29	330	0.0879	-38	c.-11 others(57): Show c.-114-4870_-114-4833delCTCACATTCACTCCCCCCTCATTCAG ATTCACTCCCCC	SLC7A1	ENSG00000139514.13	transcript	ENST00000380752.10	protein_coding	1/12			chr13	TogoVar
SLC7A1_chr13_29504414_29600688	29558700	TGAATCTG others(31): Show TGAATCTGAATGAGGGGGGAGTGAATGTGAGGGGGGAGA	T T	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01496.hp2 HG01243.hp1 HG01496.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0115 a0001c0001t0006g0216 a0001c0001t0006g0115 a0001c0001t0006g0216	2	330	0.0061	-38	c.-11 others(57): Show c.-114-4878_-114-4841delTCTCCCCCCTCACATTCACTCCCCCC TCATTCAGATTC	SLC7A1	ENSG00000139514.13	transcript	ENST00000380752.10	protein_coding	1/12			chr13	TogoVar
SLC7A1_chr13_29504414_29600688	29558951	AGGCAGAG others(31): Show AGGCAGAGTGAATCTGAATGAGGGGGGAGTGAATGTGAG	A A	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG01257.hp2 HG01943.hp2 others(10): Show HG00438.hp1 HG01257.hp2 HG01943.hp2 HG02040.hp2 HG02080.hp1 HG02129.hp2 HG02165.hp2 HG02523.hp2 HG04115.hp2 NA18612.hp2 NA18991.hp1 NA18995.hp1 NA19001.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0020 a0001c0001 a0001c0002 a0001c0020	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(4): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0002t0004 a0001c0002t0009 a0001c0002t0019 a0001c0020t0005	a0001c0001t0001g0006 a0001c0001t0001g0129 a0001c0001t0001g0261 others(9): Show a0001c0001t0001g0006 a0001c0001t0001g0129 a0001c0001t0001g0261 a0001c0001t0003g0146 a0001c0001t0004g0243 a0001c0002t0004g0141 a0001c0002t0004g0147 a0001c0002t0004g0153 a0001c0002t0004g0160 a0001c0002t0009g0289 a0001c0002t0019g0019 a0001c0020t0005g0312	13	330	0.0394	-38	c.-11 others(57): Show c.-114-5129_-114-5092delCTCACATTCACTCCCCCCTCATTCAG ATTCACTCTGCC	SLC7A1	ENSG00000139514.13	transcript	ENST00000380752.10	protein_coding	1/12			chr13	TogoVar
SLC8A1_chr2_40092270_40457090	40253890	AAACAAAC others(31): Show AAACAAACGTTGGTTTATGGTACAAGAATACAGTTAGCT	A A	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00544.hp1 HG00642.hp1 others(52): Show HG00408.hp2 HG00544.hp1 HG00642.hp1 HG00642.hp2 HG00741.hp2 HG01069.hp1 HG01071.hp1 HG01099.hp1 HG01106.hp1 HG01167.hp2 HG01192.hp2 HG01884.hp1 HG01884.hp2 HG01975.hp1 HG01978.hp1 HG02004.hp1 HG02027.hp1 HG02055.hp2 HG02109.hp2 HG02129.hp1 HG02132.hp2 HG02257.hp1 HG02280.hp1 HG02293.hp1 HG02451.hp1 HG02615.hp2 HG02683.hp2 HG02717.hp2 HG02809.hp2 HG02818.hp2 HG02896.hp1 HG02897.hp1 HG02922.hp2 HG02965.hp1 HG02976.hp2 HG03130.hp2 HG03195.hp1 HG03209.hp1 HG03225.hp1 HG03516.hp2 HG03654.hp1 HG04204.hp2 NA18522.hp2 NA18906.hp2 NA18950.hp2 NA18953.hp2 NA18957.hp2 NA18979.hp1 NA18982.hp1 NA18989.hp2 NA18993.hp1 NA19000.hp2 NA19010.hp2 NA19068.hp2 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(48): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 a0001c0001t0012 a0001c0001t0016 a0001c0001t0021 a0001c0001t0047 a0001c0001t0059 a0001c0001t0060 a0001c0001t0061 a0001c0001t0063 a0001c0001t0064 a0001c0001t0065 a0001c0001t0071 a0001c0001t0076 a0001c0001t0077 a0001c0001t0078 a0001c0001t0079 a0001c0001t0080 a0001c0001t0085 a0001c0001t0086 a0001c0001t0088 a0001c0001t0089 a0001c0001t0090 a0001c0001t0092 a0001c0001t0093 a0001c0001t0095 a0001c0001t0099 a0001c0001t0100 a0001c0001t0101 a0001c0001t0102 a0001c0001t0103 a0001c0001t0105 a0001c0001t0107 a0001c0001t0108 a0001c0001t0111 a0001c0001t0119 a0001c0001t0120 a0001c0001t0127 a0001c0001t0148 a0001c0001t0155 a0001c0001t0160 a0001c0001t0162 a0001c0001t0163 a0001c0001t0164 a0001c0001t0178 a0001c0001t0181 a0001c0001t0182 a0001c0001t0187 a0001c0001t0189	a0001c0001t0001g0154 a0001c0001t0003g0054 a0001c0001t0003g0212 others(52): Show a0001c0001t0001g0154 a0001c0001t0003g0054 a0001c0001t0003g0212 a0001c0001t0005g0020 a0001c0001t0005g0209 a0001c0001t0006g0136 a0001c0001t0012g0037 a0001c0001t0012g0038 a0001c0001t0016g0017 a0001c0001t0016g0152 a0001c0001t0021g0031 a0001c0001t0047g0011 a0001c0001t0059g0215 a0001c0001t0060g0042 a0001c0001t0061g0055 a0001c0001t0063g0053 a0001c0001t0064g0095 a0001c0001t0065g0065 a0001c0001t0071g0234 a0001c0001t0076g0148 a0001c0001t0077g0147 a0001c0001t0078g0066 a0001c0001t0079g0145 a0001c0001t0080g0082 a0001c0001t0085g0196 a0001c0001t0086g0025 a0001c0001t0088g0062 a0001c0001t0089g0140 a0001c0001t0090g0030 a0001c0001t0092g0135 a0001c0001t0093g0128 a0001c0001t0095g0221 a0001c0001t0099g0180 a0001c0001t0100g0236 a0001c0001t0101g0199 a0001c0001t0102g0100 a0001c0001t0103g0123 a0001c0001t0105g0045 a0001c0001t0107g0049 a0001c0001t0108g0024 a0001c0001t0111g0183 a0001c0001t0119g0121 a0001c0001t0120g0077 a0001c0001t0127g0150 a0001c0001t0148g0126 a0001c0001t0155g0201 a0001c0001t0160g0010 a0001c0001t0162g0208 a0001c0001t0163g0193 a0001c0001t0164g0060 a0001c0001t0178g0014 a0001c0001t0181g0076 a0001c0001t0182g0040 a0001c0001t0187g0083 a0001c0001t0189g0118	55	236	0.2331	-38	c.180 others(59): Show c.1809-75435_1809-75398delAGCTAACTGTATTCTTGTACCATA AACCAACGTTTGTT	SLC8A1	ENSG00000183023.19	transcript	ENST00000332839.9	protein_coding	2/10			chr2	TogoVar
SLC9A5_chr16_67243979_67277191	67268674	ATATATAT others(31): Show ATATATATATATATATATATATATATATATATATATATT	A A	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02818.hp1 HG02280.hp1 HG02818.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0041 a0001c0002t0002g0054 a0001c0002t0002g0041 a0001c0002t0002g0054	2	204	0.0098	-38	c.221 others(57): Show c.2219-2062_2219-2025delATATATATATATATATATATATATAT ATATATATATTT	SLC9A5	ENSG00000135740.17	transcript	ENST00000299798.16	protein_coding	15/15		INFO_REALIGN_3_PRIME	chr16	TogoVar
SLC9A6_chrX_135980435_136052269	136023163	GTATATAT others(31): Show GTATATATATATATATATATATATATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG01978.hp2 HG01978.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0145 a0001c0001t0001g0145	1	199	0.0050	-38	c.130 others(55): Show c.1306+489_1306+526delTATATATATATATATATATATATATATA TATATATATA	SLC9A6	ENSG00000198689.13	transcript	ENST00000630721.3	protein_coding	12/17		INFO_REALIGN_3_PRIME	chrX	TogoVar
SLC9A8_chr20_49807828_49897242	49893689	TGGTGCTG others(31): Show TGGTGCTGGGGACAGAAGGAACCTCTGCGCATACAGGCA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00558.hp2 HG00558.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0029 a0001c0001t0002g0029	1	360	0.0028	-38	c.57 others(49): Show c.5754_*5791delGGTGCTGGGGACAGAAGGAACCTCTGCGCATACA GGCA	SLC9A8	ENSG00000197818.12	transcript	ENST00000361573.3	protein_coding		1448		chr20	TogoVar
SLCO3A1_chr15_91848708_92170903	91904021	AGGAGTGG others(31): Show AGGAGTGGGTCGGGTAGAGGGATCTGTGTTCAGCGGGAG	A A	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00280.hp1 HG00558.hp1 others(96): Show HG00099.hp2 HG00280.hp1 HG00558.hp1 HG00558.hp2 HG00621.hp2 HG00642.hp2 HG00673.hp1 HG00733.hp1 HG00733.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp2 HG01071.hp1 HG01074.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp2 HG01109.hp2 HG01169.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp2 HG01346.hp2 HG01358.hp1 HG01361.hp1 HG01496.hp1 HG01496.hp2 HG01891.hp2 HG01952.hp2 HG01978.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02109.hp2 HG02132.hp1 HG02132.hp2 HG02155.hp2 HG02257.hp1 HG02258.hp1 HG02258.hp2 HG02300.hp1 HG02559.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp1 HG02818.hp2 HG02896.hp2 HG02897.hp1 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG03017.hp1 HG03041.hp1 HG03130.hp1 HG03130.hp2 HG03195.hp2 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03471.hp1 HG03471.hp2 HG03491.hp1 HG03491.hp2 HG03540.hp1 HG03540.hp2 HG03704.hp1 HG03942.hp2 HG04115.hp2 HG04184.hp2 HG04199.hp1 HG06807.hp2 NA18612.hp1 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18941.hp2 NA18946.hp1 NA18965.hp2 NA18970.hp1 NA18979.hp1 NA18980.hp1 NA18986.hp1 NA18991.hp2 NA19007.hp2 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19081.hp1 NA19081.hp2 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20905.hp1 NA20905.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0002 a0001c0004 others(9): Show a0001c0001 a0001c0002 a0001c0004 a0001c0006 a0001c0007 a0001c0009 a0001c0011 a0002c0003 a0002c0005 a0002c0013 a0002c0015 a0003c0012	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(54): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0012 a0001c0001t0016 a0001c0001t0017 a0001c0001t0018 a0001c0001t0019 a0001c0001t0020 a0001c0001t0021 a0001c0001t0023 a0001c0001t0025 a0001c0001t0027 a0001c0001t0029 a0001c0001t0033 a0001c0001t0034 a0001c0001t0038 a0001c0001t0044 a0001c0001t0046 a0001c0001t0050 a0001c0001t0054 a0001c0001t0057 a0001c0001t0059 a0001c0001t0060 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0005 a0001c0002t0015 a0001c0002t0017 a0001c0002t0026 a0001c0002t0030 a0001c0002t0040 a0001c0004t0003 a0001c0004t0004 a0001c0006t0004 a0001c0006t0055 a0001c0007t0002 a0001c0009t0001 a0001c0011t0047 a0002c0003t0001 a0002c0003t0002 a0002c0003t0003 a0002c0003t0009 a0002c0003t0011 a0002c0003t0032 a0002c0005t0009 a0002c0005t0043 a0002c0013t0031 a0002c0015t0035 a0003c0012t0004	a0001c0001t0001g0026 a0001c0001t0001g0028 a0001c0001t0001g0087 others(96): Show a0001c0001t0001g0026 a0001c0001t0001g0028 a0001c0001t0001g0087 a0001c0001t0001g0186 a0001c0001t0002g0002 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0082 a0001c0001t0002g0083 a0001c0001t0002g0138 a0001c0001t0002g0145 a0001c0001t0003g0009 a0001c0001t0003g0010 a0001c0001t0003g0056 a0001c0001t0003g0071 a0001c0001t0003g0101 a0001c0001t0003g0102 a0001c0001t0003g0124 a0001c0001t0003g0150 a0001c0001t0005g0060 a0001c0001t0005g0120 a0001c0001t0005g0133 a0001c0001t0006g0158 a0001c0001t0006g0169 a0001c0001t0006g0170 a0001c0001t0007g0031 a0001c0001t0007g0182 a0001c0001t0007g0183 a0001c0001t0007g0185 a0001c0001t0008g0067 a0001c0001t0008g0132 a0001c0001t0009g0174 a0001c0001t0010g0021 a0001c0001t0012g0007 a0001c0001t0016g0119 a0001c0001t0016g0122 a0001c0001t0017g0066 a0001c0001t0018g0187 a0001c0001t0019g0068 a0001c0001t0020g0126 a0001c0001t0021g0090 a0001c0001t0021g0139 a0001c0001t0023g0058 a0001c0001t0025g0125 a0001c0001t0027g0040 a0001c0001t0029g0131 a0001c0001t0033g0027 a0001c0001t0034g0012 a0001c0001t0038g0181 a0001c0001t0044g0006 a0001c0001t0046g0030 a0001c0001t0050g0165 a0001c0001t0054g0172 a0001c0001t0057g0179 a0001c0001t0059g0166 a0001c0001t0060g0176 a0001c0002t0001g0070 a0001c0002t0001g0089 a0001c0002t0001g0091 a0001c0002t0001g0093 a0001c0002t0001g0117 a0001c0002t0001g0118 a0001c0002t0001g0135 a0001c0002t0001g0188 a0001c0002t0002g0050 a0001c0002t0002g0079 a0001c0002t0002g0084 a0001c0002t0002g0092 a0001c0002t0002g0103 a0001c0002t0002g0134 a0001c0002t0002g0146 a0001c0002t0003g0104 a0001c0002t0003g0111 a0001c0002t0005g0097 a0001c0002t0015g0175 a0001c0002t0017g0037 a0001c0002t0026g0140 a0001c0002t0030g0078 a0001c0002t0040g0036 a0001c0004t0003g0136 a0001c0004t0004g0094 a0001c0004t0004g0121 a0001c0006t0004g0041 a0001c0006t0055g0167 a0001c0007t0002g0148 a0001c0009t0001g0059 a0001c0011t0047g0029 a0002c0003t0001g0008 a0002c0003t0001g0129 a0002c0003t0002g0100 a0002c0003t0003g0110 a0002c0003t0009g0155 a0002c0003t0011g0039 a0002c0003t0032g0076 a0002c0005t0009g0178 a0002c0005t0043g0184 a0002c0013t0031g0099 a0002c0015t0035g0085 a0003c0012t0004g0153	99	190	0.5211	-38	c.181 others(57): Show c.181-11967_181-11930delTGGGTCGGGTAGAGGGATCTGTGTTC AGCGGGAGGGAG	SLCO3A1	ENSG00000176463.14	transcript	ENST00000318445.11	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr15	TogoVar
SLFN11_chr17_35345305_35378621	35378447	GTATATAT others(31): Show GTATATATATATATATATATATATATATATATATATATA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00323.hp1 HG00408.hp1 HG00423.hp1 others(92): Show HG00323.hp1 HG00408.hp1 HG00423.hp1 HG00558.hp1 HG00597.hp1 HG00735.hp2 HG00738.hp2 HG01106.hp1 HG01123.hp1 HG01256.hp1 HG01346.hp2 HG01433.hp2 HG01496.hp1 HG01891.hp1 HG01981.hp1 HG02004.hp1 HG02027.hp1 HG02040.hp1 HG02040.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02083.hp2 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02135.hp1 HG02135.hp2 HG02155.hp2 HG02273.hp1 HG02615.hp1 HG03704.hp2 HG03942.hp2 HG04115.hp2 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18940.hp1 NA18941.hp2 NA18942.hp1 NA18943.hp1 NA18945.hp2 NA18946.hp1 NA18947.hp2 NA18950.hp2 NA18951.hp2 NA18954.hp1 NA18955.hp2 NA18960.hp1 NA18960.hp2 NA18961.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18966.hp2 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18971.hp2 NA18974.hp2 NA18975.hp1 NA18978.hp1 NA18983.hp1 NA18984.hp2 NA18986.hp2 NA18990.hp2 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18998.hp1 NA19000.hp2 NA19001.hp2 NA19005.hp1 NA19006.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp2 NA19012.hp1 NA19012.hp2 NA19055.hp2 NA19063.hp1 NA19066.hp2 NA19068.hp1 NA19074.hp2 NA19078.hp2 NA19079.hp1 NA19082.hp1 NA19083.hp1 NA19086.hp1 NA19088.hp1 NA19090.hp1 NA19091.hp1	a0001 a0002 a0003 others(8): Show a0001 a0002 a0003 a0005 a0006 a0007 a0009 a0015 a0020 a0021 a0027	a0001c0002 a0001c0003 a0001c0014 others(11): Show a0001c0002 a0001c0003 a0001c0014 a0001c0025 a0002c0001 a0003c0004 a0005c0008 a0006c0009 a0007c0010 a0009c0012 a0015c0018 a0020c0029 a0021c0044 a0027c0038	a0001c0002t0001 a0001c0002t0004 a0001c0002t0022 others(17): Show a0001c0002t0001 a0001c0002t0004 a0001c0002t0022 a0001c0003t0001 a0001c0003t0024 a0001c0014t0001 a0001c0025t0001 a0002c0001t0001 a0002c0001t0003 a0003c0004t0001 a0003c0004t0004 a0005c0008t0001 a0005c0008t0004 a0006c0009t0006 a0007c0010t0003 a0009c0012t0006 a0015c0018t0001 a0020c0029t0019 a0021c0044t0003 a0027c0038t0001	a0001c0002t0001g0027 a0001c0002t0001g0028 a0001c0002t0001g0050 others(53): Show a0001c0002t0001g0027 a0001c0002t0001g0028 a0001c0002t0001g0050 a0001c0002t0001g0065 a0001c0002t0001g0106 a0001c0002t0001g0109 a0001c0002t0001g0110 a0001c0002t0001g0112 a0001c0002t0001g0127 a0001c0002t0004g0016 a0001c0002t0004g0105 a0001c0002t0004g0108 a0001c0002t0004g0113 a0001c0002t0004g0122 a0001c0002t0022g0092 a0001c0003t0001g0003 a0001c0003t0001g0048 a0001c0003t0001g0049 a0001c0003t0001g0051 a0001c0003t0001g0052 a0001c0003t0001g0107 a0001c0003t0001g0111 a0001c0003t0001g0116 a0001c0003t0001g0118 a0001c0003t0001g0123 a0001c0003t0001g0128 a0001c0003t0001g0129 a0001c0003t0001g0130 a0001c0003t0001g0213 a0001c0003t0024g0119 a0001c0014t0001g0029 a0001c0014t0001g0124 a0001c0014t0001g0125 a0001c0025t0001g0120 a0002c0001t0001g0009 a0002c0001t0001g0097 a0002c0001t0001g0098 a0002c0001t0001g0100 a0002c0001t0001g0104 a0002c0001t0003g0095 a0003c0004t0001g0096 a0003c0004t0001g0099 a0003c0004t0004g0047 a0005c0008t0001g0010 a0005c0008t0001g0114 a0005c0008t0001g0117 a0005c0008t0004g0121 a0006c0009t0006g0015 a0007c0010t0003g0126 a0009c0012t0006g0026 a0009c0012t0006g0101 a0009c0012t0006g0102 a0015c0018t0001g0103 a0020c0029t0019g0093 a0021c0044t0003g0115 a0027c0038t0001g0186	95	466	0.2039	-38	c.-52 others(49): Show c.-5246_-5209delTATATATATATATATATATATATATATATATATA TATA	SLFN11	ENSG00000172716.17	transcript	ENST00000685675.1	protein_coding		4827		chr17	TogoVar
SLFN12L_chr17_35459254_35542678	35530403	AAGGAAGG others(31): Show AAGGAAGGAAGGAAGGAAGGAAGGAAGGGAAGGGAAGGG	A A	intron_variant intron_variant	MODIFIER	NA18906.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0146 a0001c0001t0146	a0001c0001t0146g0168 a0001c0001t0146g0168	1	360	0.0028	-38	c.-60 others(57): Show c.-606+7132_-606+7169delCCCTTCCCTTCCCTTCCTTCCTTCCT TCCTTCCTTCCT	SLFN12L	ENSG00000205045.12	transcript	ENST00000628453.4	protein_coding	1/4			chr17	TogoVar
SLFN12L_chr17_35459254_35542678	35530417	GGAAGGAA others(31): Show GGAAGGAAGGAAGGGAAGGGAAGGGAAGAAAGAAAGAAA	G G	intron_variant intron_variant	MODIFIER	NA18747.hp2 NA18747.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0184 a0001c0001t0004g0184	1	360	0.0028	-38	c.-60 others(57): Show c.-606+7118_-606+7155delTTTCTTTCTTTCTTCCCTTCCCTTCC CTTCCTTCCTTC	SLFN12L	ENSG00000205045.12	transcript	ENST00000628453.4	protein_coding	1/4			chr17	TogoVar
SLFNL1_chr1_41010597_41026725	41021550	TGGAATCC others(31): Show TGGAATCCTTGAGGCAGTTGGCCTGGGGGCATTCAGGTC	T T	intron_variant intron_variant	MODIFIER	NA18944.hp1 NA18944.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0054 a0001c0001t0001g0054	1	430	0.0023	-38	c.-12 others(53): Show c.-126+35_-126+72delGACCTGAATGCCCCCAGGCCAACTGCCTCA AGGATTCC	SLFNL1	ENSG00000171790.16	transcript	ENST00000302946.13	protein_coding	1/5			chr1	TogoVar
SLMAP_chr3_57751309_57935003	57934378	GAGTTTAT others(31): Show GAGTTTATTCAGTCATGCAACTTCGGCAAATAAAGTTCT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00733.hp1 HG00733.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0209 a0001c0002t0001g0209	1	310	0.0032	-38	c.70 others(49): Show c.7090_*7127delAGTTTATTCAGTCATGCAACTTCGGCAAATAAAG TTCT	SLMAP	ENSG00000163681.17	transcript	ENST00000671191.1	protein_coding		4376		chr3	TogoVar

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