regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SAMD11_chr1_918923_949574 | 932975 | GCGTGGGC others(32): Show |
G | intron_variant | MODIFIER | HG02523.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0031 | 1 | 434 | 0.0023 | -39 | c.842 others(56): Show |
SAMD11 | ENSG00000187634.13 | transcript | ENST00000616016.5 | protein_coding | 4/13 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
SAMD11_chr1_918923_949574 | 936264 | AGGGGTCC others(32): Show |
A | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(242): Show |
a0001a0002a0003others(10): Show | a0001c0001a0001c0002a0001c0004others(23): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(39): Show | a0001c0001t0001g0002a0001c0001t0001g0003a0001c0001t0001g0006others(189): Show | 245 | 434 | 0.5645 | -39 | c.967 others(54): Show |
SAMD11 | ENSG00000187634.13 | transcript | ENST00000616016.5 | protein_coding | 5/13 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
SAMD11_chr1_918923_949574 | 936303 | GGGGGTCC others(32): Show |
G | intron_variant | MODIFIER | HG02723.hp2 | a0001 | a0001c0011 | a0001c0011t0028 | a0001c0011t0028g0316 | 1 | 434 | 0.0023 | -39 | c.967 others(54): Show |
SAMD11 | ENSG00000187634.13 | transcript | ENST00000616016.5 | protein_coding | 5/13 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
SARDH_chr9_133658560_133743352 | 133668471 | CCCCTCGC others(32): Show |
C | intron_variant | MODIFIER | HG01168.hp2 | a0002 | a0002c0020 | a0002c0020t0003 | a0002c0020t0003g0207 | 1 | 262 | 0.0038 | -39 | c.249 others(58): Show |
SARDH | ENSG00000123453.19 | transcript | ENST00000439388.6 | protein_coding | 19/20 | chr9 | TogoVar | ||||||
SBK2_chr19_55523611_55542133 | 55537301 | CCAGGAGT others(32): Show |
C | upstream_gene_variant | MODIFIER | NA18975.hp1 NA18982.hp2 |
a0003 | a0003c0005 | a0003c0005t0005 | a0003c0005t0005g0054a0003c0005t0005g0295 | 2 | 434 | 0.0046 | -39 | c.-28 others(48): Show |
SBK2 | ENSG00000187550.9 | transcript | ENST00000413299.6 | protein_coding | 169 | chr19 | TogoVar | ||||||
SBK3_chr19_55535656_55550543 | 55537301 | CCAGGAGT others(32): Show |
C | downstream_gene_variant | MODIFIER | NA18975.hp2 NA18982.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0006 | 2 | 438 | 0.0046 | -39 | c.*35 others(50): Show |
SBK3 | ENSG00000231274.5 | transcript | ENST00000612221.1 | protein_coding | 3354 | chr19 | TogoVar | ||||||
SCGB1C1_chr11_188078_199575 | 191859 | TAACCCCT others(32): Show |
T | upstream_gene_variant | MODIFIER | HG00673.hp1 | a0002 | a0002c0001 | a0002c0001t0002 | a0002c0001t0002g0001 | 1 | 354 | 0.0028 | -39 | c.-12 others(50): Show |
SCGB1C1 | ENSG00000188076.3 | transcript | ENST00000342878.3 | protein_coding | 1218 | chr11 | TogoVar | ||||||
SCGB1C1_chr11_188078_199575 | 191861 | ACCCCTAA others(32): Show |
A | upstream_gene_variant | MODIFIER | HG03209.hp1 | a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0001 | 1 | 354 | 0.0028 | -39 | c.-12 others(50): Show |
SCGB1C1 | ENSG00000188076.3 | transcript | ENST00000342878.3 | protein_coding | 1216 | chr11 | TogoVar | ||||||
SCLY_chr2_238056001_238104413 | 238096412 | AATGCCTT others(32): Show |
A | intron_variant | MODIFIER | HG01257.hp1 | a0002 | a0002c0002 | a0002c0002t0072 | a0002c0002t0072g0187 | 1 | 392 | 0.0026 | -39 | c.110 others(56): Show |
SCLY | ENSG00000132330.18 | transcript | ENST00000254663.12 | protein_coding | 10/11 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
SCML1_chrX_17732493_17759985 | 17738609 | GTGTGTTC others(32): Show |
G | intron_variant | MODIFIER | NA19010.hp2 | a0001 | a0001c0001 | a0001c0001t0011 | a0001c0001t0011g0026 | 1 | 281 | 0.0036 | -39 | c.-11 others(56): Show |
SCML1 | ENSG00000047634.15 | transcript | ENST00000380041.8 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
SCNN1B_chr16_23297302_23386294 | 23377751 | TTTCTTTC others(32): Show |
T | intron_variant | MODIFIER | HG00099.hp2 HG00323.hp1 HG00738.hp1 others(42): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0001t0006a0001c0002t0001others(1): Show | a0001c0001t0001g0016a0001c0001t0001g0063a0001c0001t0001g0084others(42): Show | 45 | 306 | 0.1471 | -39 | c.140 others(56): Show |
SCNN1B | ENSG00000168447.11 | transcript | ENST00000343070.7 | protein_coding | 10/12 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |||||
SCNN1D_chr1_1275436_1297025 | 1289707 | TCCCGTGT others(32): Show |
T | intron_variant | MODIFIER | NA18969.hp1 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0089 | 1 | 290 | 0.0035 | -39 | c.166 others(56): Show |
SCNN1D | ENSG00000162572.21 | transcript | ENST00000379116.10 | protein_coding | 12/17 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
SCYGR8_chr2_227740894_227751220 | 227745939 | TGCAGTGG others(32): Show |
T | conservative_inframe_deletion | MODERATE | HG00423.hp2 HG00735.hp1 HG00738.hp2 others(17): Show |
a0004 | a0004c0004 | a0004c0004t0000 | a0004c0004t0000g0000 | 20 | 457 | 0.0438 | -39 | c.49_ others(44): Show |
p.Ser others(11): Show |
SCYGR8 | ENSG00000284635.2 | transcript | ENST00000641981.2 | protein_coding | 1/1 | 49/327 | 49/327 | 17/108 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |
SDC1_chr2_20195797_20230130 | 20224380 | GTCTGGTT others(32): Show |
G | intron_variant | MODIFIER | HG03710.hp2 | a0001 | a0001c0001 | a0001c0001t0009 | a0001c0001t0009g0308 | 1 | 412 | 0.0024 | -39 | c.66+ others(52): Show |
SDC1 | ENSG00000115884.11 | transcript | ENST00000254351.9 | protein_coding | 1/4 | chr2 | TogoVar | ||||||
SDCCAG8_chr1_243251041_243505091 | 243391916 | CAGTAGCT others(32): Show |
C | intron_variant | MODIFIER | HG01243.hp2 HG02622.hp2 HG02895.hp2 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0033a0001c0001t0001g0034a0001c0001t0001g0035others(4): Show | 7 | 189 | 0.0370 | -39 | c.161 others(60): Show |
SDCCAG8 | ENSG00000054282.16 | transcript | ENST00000366541.8 | protein_coding | 13/17 | chr1 | TogoVar | ||||||
SDHD_chr11_112081873_112100794 | 112082330 | GTGTTAAA others(32): Show |
G | upstream_gene_variant | MODIFIER | HG02257.hp2 HG02258.hp2 HG02723.hp1 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0008 | 6 | 388 | 0.0155 | -39 | c.-45 others(50): Show |
SDHD | ENSG00000204370.13 | transcript | ENST00000375549.8 | protein_coding | 4542 | chr11 | TogoVar | ||||||
SEC14L1_chr17_77135969_77222101 | 77215827 | AGTAGGTA others(32): Show |
A | 3_prime_UTR_variant | MODIFIER | HG00642.hp1 HG00738.hp2 HG01109.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0010 | a0001c0001t0010g0006a0001c0001t0010g0114a0001c0001t0010g0120others(2): Show | 6 | 430 | 0.0140 | -39 | c.*18 others(50): Show |
SEC14L1 | ENSG00000129657.16 | transcript | ENST00000436233.9 | protein_coding | 17/17 | 1815 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||
SEC14L1_chr17_77135969_77222101 | 77216160 | TTCGTAGG others(32): Show |
T | 3_prime_UTR_variant | MODIFIER | HG00099.hp1 HG00323.hp2 HG00438.hp2 others(93): Show |
a0001a0002a0003 | a0001c0001a0001c0003a0002c0004others(1): Show | a0001c0001t0003a0001c0001t0007a0001c0001t0008others(8): Show | a0001c0001t0003g0007a0001c0001t0003g0021a0001c0001t0003g0106others(91): Show | 96 | 430 | 0.2233 | -39 | c.*21 others(50): Show |
SEC14L1 | ENSG00000129657.16 | transcript | ENST00000436233.9 | protein_coding | 17/17 | 2139 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||
SELENOP_chr5_42794880_42816892 | 42810973 | TATAGTTG others(32): Show |
T | intron_variant | MODIFIER | HG03239.hp1 | a0001 | a0001c0002 | a0001c0002t0003 | a0001c0002t0003g0040 | 1 | 396 | 0.0025 | -39 | c.-14 others(54): Show |
SELENOP | ENSG00000250722.6 | transcript | ENST00000514985.6 | protein_coding | 1/4 | WARNING_TRANSCRIPT_MULTIPLE_STOP_CODONS | chr5 | TogoVar | |||||
SEPTIN9_chr17_77276499_77505593 | 77350981 | GTGTGTGC others(32): Show |
G | intron_variant | MODIFIER | HG00738.hp2 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0094 | 1 | 150 | 0.0067 | -39 | c.76+ others(56): Show |
SEPTIN9 | ENSG00000184640.20 | transcript | ENST00000427177.6 | protein_coding | 2/11 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
SEPTIN9_chr17_77314518_77505593 | 77350981 | GTGTGTGC others(32): Show |
G | intron_variant | MODIFIER | HG00738.hp2 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0062 | 1 | 158 | 0.0063 | -39 | c.22+ others(56): Show |
SEPTIN9 | ENSG00000184640.20 | transcript | ENST00000329047.13 | protein_coding | 1/10 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
SERPINA5_chr14_94576426_94598118 | 94591209 | CTCCACTC others(32): Show |
C | intron_variant | MODIFIER | HG02040.hp2 | a0002 | a0002c0004 | a0002c0004t0007 | a0002c0004t0007g0313 | 1 | 464 | 0.0022 | -39 | c.103 others(56): Show |
SERPINA5 | ENSG00000188488.14 | transcript | ENST00000329597.12 | protein_coding | 5/5 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | |||||
SERPINB12_chr18_63537369_63574329 | 63566045 | ATTGCTTG others(32): Show |
A | intron_variant | MODIFIER | NA18971.hp2 | a0002 | a0002c0002 | a0002c0002t0040 | a0002c0002t0040g0071 | 1 | 402 | 0.0025 | -39 | c.873 others(54): Show |
SERPINB12 | ENSG00000166634.7 | transcript | ENST00000382768.2 | protein_coding | 7/7 | chr18 | TogoVar | ||||||
SERPINB12_chr18_63537369_63574329 | 63572177 | AGCATCAA others(32): Show |
A | downstream_gene_variant | MODIFIER | HG02135.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0011 | 1 | 402 | 0.0025 | -39 | c.*51 others(50): Show |
SERPINB12 | ENSG00000166634.7 | transcript | ENST00000382768.2 | protein_coding | 2849 | chr18 | TogoVar | ||||||
SERPINB4_chr18_63632259_63649256 | 63636785 | AGATATTC others(32): Show |
A | downstream_gene_variant | MODIFIER | NA19083.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 1 | 424 | 0.0024 | -39 | c.*89 others(48): Show |
SERPINB4 | ENSG00000206073.11 | transcript | ENST00000341074.10 | protein_coding | 473 | chr18 | TogoVar | ||||||
SERPINE1_chr7_101122104_101144247 | 101143515 | GAGAAAGA others(32): Show |
G | downstream_gene_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00280.hp2 others(19): Show |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0001a0001c0001t0006a0001c0001t0007others(1): Show | a0001c0001t0001g0017a0001c0001t0001g0032a0001c0001t0001g0036others(19): Show | 22 | 436 | 0.0505 | -39 | c.*60 others(50): Show |
SERPINE1 | ENSG00000106366.9 | transcript | ENST00000223095.5 | protein_coding | 4269 | chr7 | TogoVar | ||||||
SFMBT2_chr10_7153624_7416034 | 7367273 | CTCCTGAT others(32): Show |
C | intron_variant | MODIFIER | HG00408.hp1 HG00408.hp2 HG00642.hp1 others(83): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0003others(5): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(34): Show | a0001c0001t0001g0011a0001c0001t0001g0083a0001c0001t0001g0103others(83): Show | 86 | 144 | 0.5972 | -39 | c.436 others(54): Show |
SFMBT2 | ENSG00000198879.13 | transcript | ENST00000397167.6 | protein_coding | 4/20 | chr10 | TogoVar | ||||||
SFRP5_chr10_97761751_97776999 | 97763007 | CCTCCGGC others(32): Show |
C | downstream_gene_variant | MODIFIER | HG01884.hp1 HG02258.hp1 HG02615.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0010 | 6 | 380 | 0.0158 | -39 | c.*44 others(50): Show |
SFRP5 | ENSG00000120057.5 | transcript | ENST00000266066.4 | protein_coding | 3743 | chr10 | TogoVar | ||||||
SFSWAP_chr12_131706090_131804738 | 131795964 | CGGGAGGG others(32): Show |
C | intron_variant | MODIFIER | HG02630.hp2 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0036 | 1 | 318 | 0.0031 | -39 | c.253 others(58): Show |
SFSWAP | ENSG00000061936.10 | transcript | ENST00000261674.9 | protein_coding | 15/17 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
SGIP1_chr1_66529153_66756139 | 66660119 | GGAAAGAA others(32): Show |
G | intron_variant | MODIFIER | NA18906.hp1 | a0001 | a0001c0001 | a0001c0001t0052 | a0001c0001t0052g0201 | 1 | 302 | 0.0033 | -39 | c.460 others(54): Show |
SGIP1 | ENSG00000118473.23 | transcript | ENST00000371037.9 | protein_coding | 7/24 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
SGPP2_chr2_222419543_222567621 | 222556736 | CCCCATCC others(32): Show |
C | intron_variant | MODIFIER | HG04199.hp2 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0171 | 1 | 272 | 0.0037 | -39 | c.649 others(56): Show |
SGPP2 | ENSG00000163082.10 | transcript | ENST00000321276.8 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
SH3PXD2B_chr5_172328499_172459525 | 172439254 | AAAAAAAA others(32): Show |
A | intron_variant | MODIFIER | HG00140.hp1 HG00323.hp2 HG00597.hp1 others(55): Show |
a0001a0003a0008 | a0001c0001a0001c0003a0003c0007others(1): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(18): Show | a0001c0001t0002g0138a0001c0001t0002g0139a0001c0001t0002g0140others(55): Show | 58 | 280 | 0.2071 | -39 | c.75+ others(56): Show |
SH3PXD2B | ENSG00000174705.13 | transcript | ENST00000311601.6 | protein_coding | 1/12 | chr5 | TogoVar | ||||||
SH3PXD2B_chr5_172328499_172459525 | 172439255 | AAAAAAAA others(32): Show |
A | intron_variant | MODIFIER | HG03130.hp1 HG03195.hp1 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0068a0001c0002t0006 | a0001c0001t0068g0019a0001c0002t0006g0023 | 2 | 280 | 0.0071 | -39 | c.75+ others(56): Show |
SH3PXD2B | ENSG00000174705.13 | transcript | ENST00000311601.6 | protein_coding | 1/12 | chr5 | TogoVar | ||||||
SH3PXD2B_chr5_172328499_172459525 | 172439256 | AAAAAAAA others(32): Show |
A | intron_variant | MODIFIER | HG01891.hp1 | a0001 | a0001c0001 | a0001c0001t0026 | a0001c0001t0026g0015 | 1 | 280 | 0.0036 | -39 | c.75+ others(56): Show |
SH3PXD2B | ENSG00000174705.13 | transcript | ENST00000311601.6 | protein_coding | 1/12 | chr5 | TogoVar | ||||||
SH3RF3_chr2_109124205_109509634 | 109170280 | TTCTCTTC others(32): Show |
T | intron_variant | MODIFIER | NA19002.hp1 | a0001 | a0001c0005 | a0001c0005t0070 | a0001c0005t0070g0097 | 1 | 172 | 0.0058 | -39 | c.573 others(58): Show |
SH3RF3 | ENSG00000172985.11 | transcript | ENST00000309415.8 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
SH3RF3_chr2_109124205_109509634 | 109199471 | AATGGAAT others(32): Show |
A | intron_variant | MODIFIER | HG02897.hp2 | a0001 | a0001c0005 | a0001c0005t0017 | a0001c0005t0017g0110 | 1 | 172 | 0.0058 | -39 | c.573 others(58): Show |
SH3RF3 | ENSG00000172985.11 | transcript | ENST00000309415.8 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
SHC2_chr19_411589_466033 | 451339 | TGGCTGTG others(32): Show |
T | intron_variant | MODIFIER | NA18939.hp1 NA18989.hp1 |
a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0003 | 2 | 212 | 0.0094 | -39 | c.468 others(56): Show |
SHC2 | ENSG00000129946.11 | transcript | ENST00000264554.11 | protein_coding | 1/12 | chr19 | TogoVar | ||||||
SHISAL2A_chr1_52628168_52662065 | 52638302 | GGCCCCTT others(32): Show |
G | intron_variant | MODIFIER | HG00408.hp1 HG00438.hp1 HG00597.hp1 others(171): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003 | a0001c0001t0001g0004a0001c0001t0001g0008a0001c0001t0001g0020others(165): Show | 174 | 444 | 0.3919 | -39 | c.183 others(56): Show |
SHISAL2A | ENSG00000182183.15 | transcript | ENST00000517870.2 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
SHLD3_chr5_65620027_65635928 | 65632319 | CACCTTTT others(32): Show |
C | downstream_gene_variant | MODIFIER | HG01167.hp1 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0034 | 1 | 406 | 0.0025 | -39 | c.*19 others(50): Show |
SHLD3 | ENSG00000253251.3 | transcript | ENST00000510585.3 | protein_coding | 1392 | chr5 | TogoVar | ||||||
SIGIRR_chr11_400716_419999 | 401536 | GCCCCGCT others(32): Show |
G | downstream_gene_variant | MODIFIER | HG03486.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0129 | 1 | 242 | 0.0041 | -39 | c.*43 others(50): Show |
SIGIRR | ENSG00000185187.13 | transcript | ENST00000431843.7 | protein_coding | 4179 | chr11 | TogoVar | ||||||
SIGIRR_chr11_400716_419999 | 402249 | CGACCCCC others(32): Show |
C | downstream_gene_variant | MODIFIER | NA19005.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0170 | 1 | 242 | 0.0041 | -39 | c.*36 others(50): Show |
SIGIRR | ENSG00000185187.13 | transcript | ENST00000431843.7 | protein_coding | 3466 | chr11 | TogoVar | ||||||
SIGIRR_chr11_400716_419999 | 402376 | ACCCCGGC others(32): Show |
A | downstream_gene_variant | MODIFIER | HG00423.hp1 HG03831.hp2 |
a0001a0003 | a0001c0003a0003c0008 | a0001c0003t0001a0003c0008t0001 | a0001c0003t0001g0027a0003c0008t0001g0024 | 2 | 242 | 0.0083 | -39 | c.*34 others(50): Show |
SIGIRR | ENSG00000185187.13 | transcript | ENST00000431843.7 | protein_coding | 3339 | chr11 | TogoVar | ||||||
SIGIRR_chr11_400716_419999 | 412523 | GGGGGGGG others(32): Show |
G | intron_variant | MODIFIER | HG01243.hp2 HG02145.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0025a0001c0001t0001g0026 | 2 | 242 | 0.0083 | -39 | c.-15 others(58): Show |
SIGIRR | ENSG00000185187.13 | transcript | ENST00000431843.7 | protein_coding | 1/9 | chr11 | TogoVar | ||||||
SIGIRR_chr11_400716_419999 | 412643 | GGGGAGGG others(32): Show |
G | intron_variant | MODIFIER | HG00408.hp2 NA18944.hp1 NA18944.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0143a0001c0001t0001g0144a0001c0001t0001g0145 | 3 | 242 | 0.0124 | -39 | c.-15 others(58): Show |
SIGIRR | ENSG00000185187.13 | transcript | ENST00000431843.7 | protein_coding | 1/9 | chr11 | TogoVar | ||||||
SIX5_chr19_45759785_45774252 | 45770204 | CCAGCAGC others(32): Show |
C | upstream_gene_variant | MODIFIER | HG01884.hp1 HG02896.hp1 HG02897.hp2 |
a0002a0004 | a0002c0009a0004c0020 | a0002c0009t0007a0004c0020t0018 | a0002c0009t0007g0017a0004c0020t0018g0041 | 3 | 414 | 0.0073 | -39 | c.-13 others(50): Show |
SIX5 | ENSG00000177045.11 | transcript | ENST00000317578.7 | protein_coding | 953 | chr19 | TogoVar | ||||||
SKA1_chr18_50370046_50399168 | 50385994 | TCAGAAAG others(32): Show |
T | intron_variant | MODIFIER | NA18953.hp1 | a0003 | a0003c0003 | a0003c0003t0004 | a0003c0003t0004g0084 | 1 | 387 | 0.0026 | -39 | c.449 others(54): Show |
SKA1 | ENSG00000154839.10 | transcript | ENST00000285116.8 | protein_coding | 5/6 | chr18 | TogoVar | ||||||
SKIC3_chr5_95458894_95559977 | 95492636 | CAAAAAAA others(32): Show |
C | intron_variant | MODIFIER | NA18612.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0302 | 1 | 352 | 0.0028 | -39 | c.380 others(58): Show |
SKIC3 | ENSG00000198677.13 | transcript | ENST00000358746.7 | protein_coding | 36/42 | chr5 | TogoVar | ||||||
SKOR1_chr15_67820509_67839582 | 67827144 | GGGGCCCG others(32): Show |
G | disruptive_inframe_deletion | MODERATE | HG01081.hp2 HG01255.hp2 HG01496.hp1 others(9): Show |
a0002a0010 | a0002c0004a0010c0014 | a0002c0004t0002a0010c0014t0002 | a0002c0004t0002g0001a0002c0004t0002g0046a0002c0004t0002g0056others(1): Show | 12 | 428 | 0.0280 | -39 | c.132 others(48): Show |
p.Ala others(13): Show |
SKOR1 | ENSG00000188779.12 | transcript | ENST00000380035.3 | protein_coding | 2/9 | 1420/3738 | 1326/2898 | 442/965 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |
SLA2_chr20_36607318_36651196 | 36609192 | CACGCACA others(32): Show |
C | downstream_gene_variant | MODIFIER | HG02809.hp1 | a0002 | a0002c0002 | a0002c0002t0004 | a0002c0002t0004g0237 | 1 | 360 | 0.0028 | -39 | c.*46 others(50): Show |
SLA2 | ENSG00000101082.14 | transcript | ENST00000262866.9 | protein_coding | 3125 | chr20 | TogoVar | ||||||
SLC10A6_chr4_86818468_86854384 | 86842835 | TTTCTTTC others(32): Show |
T | intron_variant | MODIFIER | NA18980.hp1 NA19081.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0041a0001c0001t0001g0042 | 2 | 350 | 0.0057 | -39 | c.377 others(56): Show |
SLC10A6 | ENSG00000145283.8 | transcript | ENST00000273905.7 | protein_coding | 1/5 | chr4 | TogoVar |