Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
AGBL4_chr1_48527854_50028954	50022614	CCACA CCACA	C C	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01943.hp2 HG02698.hp2 others(6): Show HG00639.hp2 HG01943.hp2 HG02698.hp2 HG02922.hp2 HG02970.hp1 HG03471.hp1 HG03710.hp2 NA18522.hp2 NA21309.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0007 a0001c0001t0013 a0002c0003t0008	a0001c0001t0001g0087 a0001c0001t0001g0089 a0001c0001t0002g0084 others(6): Show a0001c0001t0001g0087 a0001c0001t0001g0089 a0001c0001t0002g0084 a0001c0001t0002g0086 a0001c0001t0003g0092 a0001c0001t0005g0091 a0001c0001t0007g0085 a0001c0001t0013g0090 a0002c0003t0008g0088	9	104	0.0865	-4	c.34+ others(19): Show c.34+1145_34+1148delTGTG	AGBL4	ENSG00000186094.18	transcript	ENST00000371839.6	protein_coding	1/13			chr1	TogoVar
AGBL5_chr2_27046668_27075618	27063956	GTTCT GTTCT	G G	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG02615.hp2 HG02922.hp2 others(2): Show HG00738.hp1 HG02615.hp2 HG02922.hp2 HG02970.hp1 HG03471.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0002c0003t0001 a0001c0001t0001 a0002c0003t0001	a0001c0001t0001g0182 a0002c0003t0001g0041 a0002c0003t0001g0164 others(1): Show a0001c0001t0001g0182 a0002c0003t0001g0041 a0002c0003t0001g0164 a0002c0003t0001g0165	5	334	0.0150	-4	c.209 others(23): Show c.2090-3533_2090-3530delTTCT	AGBL5	ENSG00000084693.16	transcript	ENST00000360131.5	protein_coding	11/14		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGBL5_chr2_27046668_27075618	27065681	CACAA CACAA	C C	intron_variant intron_variant	MODIFIER	HG03130.hp2 HG06807.hp1 HG06807.hp2 others(1): Show HG03130.hp2 HG06807.hp1 HG06807.hp2 NA18906.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0004 a0001c0001 a0003c0004	a0001c0001t0001 a0003c0004t0001 a0001c0001t0001 a0003c0004t0001	a0001c0001t0001g0169 a0003c0004t0001g0042 a0003c0004t0001g0166 a0001c0001t0001g0169 a0003c0004t0001g0042 a0003c0004t0001g0166	4	334	0.0120	-4	c.209 others(23): Show c.2090-1807_2090-1804delCAAA	AGBL5	ENSG00000084693.16	transcript	ENST00000360131.5	protein_coding	11/14		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGER_chr6_32175969_32189253	32185681	GTTTC GTTTC	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00408.hp2 HG00609.hp2 HG00741.hp1 others(51): Show HG00408.hp2 HG00609.hp2 HG00741.hp1 HG01175.hp2 HG01358.hp2 HG02145.hp1 HG02155.hp2 HG02257.hp2 HG02258.hp2 HG02486.hp2 HG02572.hp1 HG02572.hp2 HG02630.hp2 HG02717.hp1 HG02818.hp1 HG02818.hp2 HG02895.hp1 HG02897.hp2 HG02965.hp1 HG03017.hp1 HG03041.hp2 HG03209.hp1 HG03471.hp2 HG03486.hp1 HG03579.hp1 HG04228.hp2 NA18944.hp2 NA18945.hp1 NA18949.hp2 NA18953.hp2 NA18954.hp2 NA18961.hp1 NA18963.hp1 NA18968.hp2 NA18972.hp1 NA18979.hp1 NA18980.hp2 NA18984.hp1 NA18990.hp1 NA18990.hp2 NA18992.hp1 NA18995.hp2 NA19054.hp1 NA19057.hp1 NA19068.hp2 NA19076.hp2 NA19077.hp2 NA19078.hp2 NA19079.hp2 NA19082.hp2 NA19085.hp1 NA19240.hp1 NA21309.hp1 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0002c0002t0001	a0001c0001t0001g0002 a0001c0001t0001g0010 a0001c0001t0001g0014 others(5): Show a0001c0001t0001g0002 a0001c0001t0001g0010 a0001c0001t0001g0014 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0002g0013 a0001c0001t0003g0025 a0002c0002t0001g0004	54	461	0.1171	-4	c.-14 others(15): Show c.-1463_-1460delGAAA	AGER	ENSG00000204305.16	transcript	ENST00000375076.9	protein_coding		1429		chr6	TogoVar
AGER_chr6_32175969_32189253	32187212	ACAGT ACAGT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03490.hp1 HG04204.hp2 NA18940.hp1 others(21): Show HG03490.hp1 HG04204.hp2 NA18940.hp1 NA18950.hp2 NA18954.hp1 NA18955.hp1 NA18957.hp2 NA18959.hp2 NA18962.hp2 NA18969.hp2 NA18979.hp2 NA18982.hp1 NA18984.hp2 NA18991.hp1 NA18992.hp2 NA18998.hp2 NA19001.hp1 NA19004.hp1 NA19056.hp1 NA19066.hp1 NA19074.hp2 NA19081.hp2 NA19085.hp2 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0006 a0001c0001t0001g0009 a0001c0001t0001g0006 a0001c0001t0001g0009	24	461	0.0521	-4	c.-29 others(15): Show c.-2994_-2991delACTG	AGER	ENSG00000204305.16	transcript	ENST00000375076.9	protein_coding		2960		chr6	TogoVar
AGFG1_chr2_227467156_227566217	227478251	AATAC AATAC	A A	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00423.hp1 HG00609.hp2 others(25): Show HG00099.hp1 HG00423.hp1 HG00609.hp2 HG01123.hp2 HG01934.hp2 HG01952.hp2 HG01993.hp2 HG02004.hp2 HG02074.hp1 HG02273.hp1 HG02293.hp2 HG02523.hp1 HG03017.hp1 HG03239.hp2 HG03942.hp2 HG04199.hp1 NA18943.hp1 NA18944.hp1 NA18946.hp1 NA18947.hp2 NA18949.hp1 NA18957.hp2 NA18962.hp1 NA18986.hp2 NA19009.hp1 NA19057.hp2 NA19083.hp1 NA19085.hp2	a0001 a0003 a0001 a0003	a0001c0003 a0003c0008 a0001c0003 a0003c0008	a0001c0003t0003 a0001c0003t0013 a0001c0003t0039 others(1): Show a0001c0003t0003 a0001c0003t0013 a0001c0003t0039 a0003c0008t0013	a0001c0003t0003g0052 a0001c0003t0003g0053 a0001c0003t0003g0054 others(25): Show a0001c0003t0003g0052 a0001c0003t0003g0053 a0001c0003t0003g0054 a0001c0003t0003g0055 a0001c0003t0003g0057 a0001c0003t0003g0058 a0001c0003t0003g0059 a0001c0003t0003g0060 a0001c0003t0003g0061 a0001c0003t0003g0062 a0001c0003t0003g0063 a0001c0003t0003g0064 a0001c0003t0003g0065 a0001c0003t0003g0066 a0001c0003t0003g0068 a0001c0003t0003g0069 a0001c0003t0003g0070 a0001c0003t0003g0071 a0001c0003t0003g0072 a0001c0003t0003g0073 a0001c0003t0003g0076 a0001c0003t0003g0078 a0001c0003t0003g0079 a0001c0003t0003g0080 a0001c0003t0013g0067 a0001c0003t0013g0077 a0001c0003t0039g0074 a0003c0008t0013g0075	28	328	0.0854	-4	c.167 others(21): Show c.167+5670_167+5673delACAT	AGFG1	ENSG00000173744.18	transcript	ENST00000310078.13	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGFG1_chr2_227467156_227566217	227481099	CTTTT CTTTT	C C	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00408.hp1 HG00423.hp2 others(150): Show HG00099.hp2 HG00408.hp1 HG00423.hp2 HG00438.hp1 HG00597.hp1 HG00597.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00642.hp1 HG00642.hp2 HG00733.hp1 HG00733.hp2 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01106.hp2 HG01123.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01346.hp1 HG01361.hp1 HG01361.hp2 HG01515.hp1 HG01515.hp2 HG01516.hp1 HG01517.hp1 HG01517.hp2 HG01884.hp2 HG01891.hp2 HG01934.hp1 HG01952.hp1 HG01993.hp1 HG02004.hp1 HG02015.hp1 HG02015.hp2 HG02055.hp1 HG02071.hp2 HG02080.hp1 HG02083.hp2 HG02109.hp1 HG02129.hp2 HG02132.hp1 HG02135.hp2 HG02145.hp2 HG02155.hp1 HG02155.hp2 HG02257.hp2 HG02273.hp2 HG02293.hp1 HG02451.hp2 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02602.hp2 HG02615.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02717.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02922.hp2 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03017.hp2 HG03041.hp1 HG03195.hp1 HG03209.hp1 HG03225.hp1 HG03225.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03579.hp2 HG03654.hp2 HG03688.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03942.hp1 HG04115.hp2 HG04184.hp1 HG04199.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 NA18747.hp2 NA18906.hp2 NA18940.hp2 NA18941.hp2 NA18943.hp2 NA18948.hp2 NA18950.hp1 NA18957.hp1 NA18960.hp2 NA18969.hp1 NA18970.hp2 NA18971.hp1 NA18973.hp2 NA18975.hp2 NA18982.hp1 NA18985.hp2 NA18989.hp1 NA18989.hp2 NA18991.hp1 NA18992.hp2 NA19000.hp2 NA19001.hp2 NA19002.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19007.hp2 NA19010.hp1 NA19011.hp2 NA19012.hp2 NA19054.hp2 NA19064.hp1 NA19065.hp1 NA19066.hp1 NA19066.hp2 NA19070.hp1 NA19074.hp1 NA19082.hp1 NA19085.hp1 NA19087.hp1 NA19090.hp1 NA19090.hp2 NA19091.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp2 NA20905.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0007 a0001c0001 a0002c0007	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 others(16): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0001t0008 a0001c0001t0010 a0001c0001t0012 a0001c0001t0019 a0001c0001t0020 a0001c0001t0023 a0001c0001t0025 a0001c0001t0027 a0001c0001t0030 a0001c0001t0031 a0001c0001t0032 a0001c0001t0033 a0001c0001t0037 a0001c0001t0038 a0001c0001t0040 a0002c0007t0012	a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0009 others(149): Show a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0112 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0173 a0001c0001t0001g0174 a0001c0001t0001g0175 a0001c0001t0001g0177 a0001c0001t0001g0178 a0001c0001t0001g0179 a0001c0001t0001g0181 a0001c0001t0001g0182 a0001c0001t0001g0184 a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0189 a0001c0001t0001g0190 a0001c0001t0001g0199 a0001c0001t0001g0200 a0001c0001t0001g0201 a0001c0001t0001g0204 a0001c0001t0001g0205 a0001c0001t0001g0206 a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0209 a0001c0001t0001g0216 a0001c0001t0001g0217 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0221 a0001c0001t0001g0222 a0001c0001t0001g0223 a0001c0001t0001g0226 a0001c0001t0001g0228 a0001c0001t0001g0229 a0001c0001t0001g0236 a0001c0001t0001g0241 a0001c0001t0001g0244 a0001c0001t0004g0003 a0001c0001t0004g0114 a0001c0001t0004g0115 a0001c0001t0004g0117 a0001c0001t0004g0133 a0001c0001t0004g0176 a0001c0001t0004g0180 a0001c0001t0004g0191 a0001c0001t0004g0196 a0001c0001t0004g0197 a0001c0001t0004g0198 a0001c0001t0004g0202 a0001c0001t0004g0227 a0001c0001t0005g0082 a0001c0001t0005g0309 a0001c0001t0005g0310 a0001c0001t0005g0311 a0001c0001t0005g0312 a0001c0001t0005g0313 a0001c0001t0005g0314 a0001c0001t0005g0315 a0001c0001t0005g0316 a0001c0001t0005g0317 a0001c0001t0005g0318 a0001c0001t0005g0319 a0001c0001t0005g0322 a0001c0001t0008g0014 a0001c0001t0008g0015 a0001c0001t0008g0018 a0001c0001t0008g0019 a0001c0001t0008g0020 a0001c0001t0008g0030 a0001c0001t0010g0029 a0001c0001t0012g0192 a0001c0001t0012g0194 a0001c0001t0019g0167 a0001c0001t0019g0203 a0001c0001t0020g0146 a0001c0001t0020g0164 a0001c0001t0023g0021 a0001c0001t0025g0224 a0001c0001t0027g0242 a0001c0001t0030g0243 a0001c0001t0031g0193 a0001c0001t0032g0093 a0001c0001t0033g0183 a0001c0001t0037g0116 a0001c0001t0038g0113 a0001c0001t0040g0140 a0002c0007t0012g0195	153	328	0.4665	-4	c.167 others(21): Show c.167+8532_167+8535delTTTT	AGFG1	ENSG00000173744.18	transcript	ENST00000310078.13	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGFG1_chr2_227467156_227566217	227481120	TTTTG TTTTG	T T	intron_variant intron_variant	MODIFIER	HG02074.hp2 NA18944.hp2 NA18946.hp2 others(4): Show HG02074.hp2 NA18944.hp2 NA18946.hp2 NA18947.hp1 NA18961.hp2 NA19012.hp1 NA19057.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0004 a0001c0001t0001g0210 a0001c0001t0001g0211 others(3): Show a0001c0001t0001g0004 a0001c0001t0001g0210 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0213 a0001c0001t0001g0214	7	328	0.0213	-4	c.167 others(21): Show c.167+8533_167+8536delTTTG	AGFG1	ENSG00000173744.18	transcript	ENST00000310078.13	protein_coding	1/12			chr2	TogoVar
AGFG1_chr2_227467156_227566217	227486588	ATATT ATATT	A A	intron_variant intron_variant	MODIFIER	HG00733.hp2 HG00741.hp1 HG01069.hp1 others(9): Show HG00733.hp2 HG00741.hp1 HG01069.hp1 HG01515.hp1 HG01517.hp1 HG02717.hp1 HG02809.hp2 HG02922.hp2 HG02970.hp2 HG03516.hp1 HG03540.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0309 a0001c0001t0005g0310 a0001c0001t0005g0311 others(9): Show a0001c0001t0005g0309 a0001c0001t0005g0310 a0001c0001t0005g0311 a0001c0001t0005g0312 a0001c0001t0005g0313 a0001c0001t0005g0314 a0001c0001t0005g0315 a0001c0001t0005g0316 a0001c0001t0005g0317 a0001c0001t0005g0318 a0001c0001t0005g0319 a0001c0001t0005g0322	12	328	0.0366	-4	c.168 others(21): Show c.168-4958_168-4955delTATT	AGFG1	ENSG00000173744.18	transcript	ENST00000310078.13	protein_coding	1/12			chr2	TogoVar
AGFG1_chr2_227467156_227566217	227497719	GTTTC GTTTC	G G	intron_variant intron_variant	MODIFIER	HG02895.hp2 HG02897.hp1 HG03490.hp2 others(1): Show HG02895.hp2 HG02897.hp1 HG03490.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0023 a0001c0001t0008 a0001c0001t0023	a0001c0001t0008g0014 a0001c0001t0008g0016 a0001c0001t0023g0017 others(1): Show a0001c0001t0008g0014 a0001c0001t0008g0016 a0001c0001t0023g0017 a0001c0001t0023g0021	4	328	0.0122	-4	c.261 others(21): Show c.261+6086_261+6089delTCTT	AGFG1	ENSG00000173744.18	transcript	ENST00000310078.13	protein_coding	2/12		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGFG1_chr2_227467156_227566217	227497731	TTTTG TTTTG	T T	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00609.hp1 HG01346.hp2 others(27): Show HG00408.hp2 HG00609.hp1 HG01346.hp2 HG01516.hp2 HG02071.hp1 HG02083.hp1 HG02132.hp2 HG02523.hp2 HG02602.hp1 HG02735.hp2 HG03688.hp2 HG03704.hp1 HG03834.hp2 HG04204.hp1 NA18941.hp1 NA18948.hp1 NA18962.hp2 NA18969.hp2 NA18971.hp2 NA18982.hp2 NA18986.hp1 NA18992.hp1 NA18999.hp2 NA19002.hp2 NA19011.hp1 NA19070.hp2 NA19074.hp2 NA19087.hp2 NA19091.hp1 NA20752.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0028 a0001c0002t0029 a0001c0002t0002 a0001c0002t0028 a0001c0002t0029	a0001c0002t0002g0006 a0001c0002t0002g0008 a0001c0002t0002g0245 others(26): Show a0001c0002t0002g0006 a0001c0002t0002g0008 a0001c0002t0002g0245 a0001c0002t0002g0247 a0001c0002t0002g0250 a0001c0002t0002g0251 a0001c0002t0002g0252 a0001c0002t0002g0253 a0001c0002t0002g0254 a0001c0002t0002g0255 a0001c0002t0002g0256 a0001c0002t0002g0257 a0001c0002t0002g0258 a0001c0002t0002g0259 a0001c0002t0002g0269 a0001c0002t0002g0270 a0001c0002t0002g0271 a0001c0002t0002g0272 a0001c0002t0002g0274 a0001c0002t0002g0277 a0001c0002t0002g0278 a0001c0002t0002g0295 a0001c0002t0002g0297 a0001c0002t0002g0298 a0001c0002t0002g0299 a0001c0002t0002g0304 a0001c0002t0002g0305 a0001c0002t0028g0303 a0001c0002t0029g0275	30	328	0.0915	-4	c.261 others(21): Show c.261+6095_261+6098delGTTT	AGFG1	ENSG00000173744.18	transcript	ENST00000310078.13	protein_coding	2/12		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGFG1_chr2_227467156_227566217	227532914	AATGT AATGT	A A	intron_variant intron_variant	MODIFIER	HG02896.hp1 HG02897.hp2 HG04115.hp2 others(1): Show HG02896.hp1 HG02897.hp2 HG04115.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0026 a0001c0001t0010g0027 a0001c0001t0010g0028 others(1): Show a0001c0001t0010g0026 a0001c0001t0010g0027 a0001c0001t0010g0028 a0001c0001t0010g0029	4	328	0.0122	-4	c.815 others(19): Show c.815-632_815-629delGTAT	AGFG1	ENSG00000173744.18	transcript	ENST00000310078.13	protein_coding	6/12		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGFG1_chr2_227467156_227566217	227544146	CTTTT CTTTT	C C	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG01515.hp2 HG01993.hp1 others(3): Show HG01081.hp1 HG01515.hp2 HG01993.hp1 HG02895.hp1 NA18960.hp2 NA18982.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0001 a0001c0001t0004	a0001c0001t0001g0102 a0001c0001t0001g0190 a0001c0001t0001g0200 others(3): Show a0001c0001t0001g0102 a0001c0001t0001g0190 a0001c0001t0001g0200 a0001c0001t0001g0201 a0001c0001t0001g0206 a0001c0001t0004g0197	6	328	0.0183	-4	c.137 others(23): Show c.1378+7176_1378+7179delTTTT	AGFG1	ENSG00000173744.18	transcript	ENST00000310078.13	protein_coding	10/12		INFO_REALIGN_3_PRIME	chr2	TogoVar
AGFG1_chr2_227467156_227566217	227557592	GTTTA GTTTA	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00099.hp2 HG00408.hp1 HG00423.hp2 others(168): Show HG00099.hp2 HG00408.hp1 HG00423.hp2 HG00438.hp1 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00733.hp1 HG00738.hp1 HG00741.hp2 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01106.hp2 HG01109.hp2 HG01123.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01346.hp1 HG01361.hp1 HG01361.hp2 HG01515.hp2 HG01516.hp1 HG01517.hp2 HG01884.hp2 HG01891.hp2 HG01934.hp1 HG01952.hp1 HG01993.hp1 HG02004.hp1 HG02015.hp1 HG02015.hp2 HG02027.hp2 HG02055.hp1 HG02071.hp2 HG02074.hp2 HG02080.hp1 HG02083.hp2 HG02109.hp1 HG02129.hp2 HG02132.hp1 HG02135.hp2 HG02145.hp2 HG02155.hp1 HG02155.hp2 HG02257.hp2 HG02273.hp2 HG02293.hp1 HG02451.hp2 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02602.hp2 HG02615.hp1 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02818.hp2 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02897.hp1 HG02965.hp2 HG02970.hp1 HG02976.hp2 HG03017.hp2 HG03041.hp1 HG03130.hp2 HG03195.hp1 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp2 HG03492.hp2 HG03516.hp2 HG03579.hp2 HG03654.hp2 HG03688.hp1 HG03704.hp2 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03942.hp1 HG04184.hp1 HG04199.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 NA18522.hp1 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18940.hp2 NA18941.hp2 NA18943.hp2 NA18944.hp2 NA18946.hp2 NA18947.hp1 NA18948.hp2 NA18949.hp2 NA18950.hp1 NA18957.hp1 NA18960.hp2 NA18961.hp2 NA18969.hp1 NA18970.hp2 NA18971.hp1 NA18973.hp2 NA18975.hp2 NA18980.hp1 NA18982.hp1 NA18985.hp2 NA18989.hp1 NA18989.hp2 NA18991.hp1 NA18992.hp2 NA18999.hp1 NA19000.hp2 NA19001.hp2 NA19002.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19007.hp2 NA19009.hp2 NA19010.hp1 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp1 NA19054.hp2 NA19057.hp1 NA19062.hp2 NA19064.hp1 NA19065.hp1 NA19066.hp1 NA19066.hp2 NA19070.hp1 NA19074.hp1 NA19082.hp1 NA19085.hp1 NA19087.hp1 NA19090.hp1 NA19090.hp2 NA19091.hp2 NA19240.hp2 NA20300.hp1 NA20752.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0007 a0001c0001 a0002c0007	a0001c0001t0001 a0001c0001t0004 a0001c0001t0008 others(18): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0008 a0001c0001t0011 a0001c0001t0012 a0001c0001t0015 a0001c0001t0017 a0001c0001t0019 a0001c0001t0020 a0001c0001t0023 a0001c0001t0025 a0001c0001t0026 a0001c0001t0027 a0001c0001t0030 a0001c0001t0031 a0001c0001t0032 a0001c0001t0033 a0001c0001t0037 a0001c0001t0038 a0001c0001t0040 a0002c0007t0012	a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 others(166): Show a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0112 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0173 a0001c0001t0001g0174 a0001c0001t0001g0175 a0001c0001t0001g0177 a0001c0001t0001g0178 a0001c0001t0001g0179 a0001c0001t0001g0181 a0001c0001t0001g0182 a0001c0001t0001g0184 a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0189 a0001c0001t0001g0190 a0001c0001t0001g0199 a0001c0001t0001g0200 a0001c0001t0001g0201 a0001c0001t0001g0204 a0001c0001t0001g0205 a0001c0001t0001g0206 a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0209 a0001c0001t0001g0210 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0213 a0001c0001t0001g0214 a0001c0001t0001g0216 a0001c0001t0001g0217 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0221 a0001c0001t0001g0222 a0001c0001t0001g0223 a0001c0001t0001g0225 a0001c0001t0001g0226 a0001c0001t0001g0228 a0001c0001t0001g0229 a0001c0001t0001g0234 a0001c0001t0001g0236 a0001c0001t0001g0241 a0001c0001t0001g0244 a0001c0001t0004g0003 a0001c0001t0004g0092 a0001c0001t0004g0094 a0001c0001t0004g0114 a0001c0001t0004g0115 a0001c0001t0004g0117 a0001c0001t0004g0133 a0001c0001t0004g0176 a0001c0001t0004g0180 a0001c0001t0004g0191 a0001c0001t0004g0196 a0001c0001t0004g0197 a0001c0001t0004g0198 a0001c0001t0004g0202 a0001c0001t0004g0215 a0001c0001t0004g0227 a0001c0001t0008g0014 a0001c0001t0008g0015 a0001c0001t0008g0016 a0001c0001t0008g0018 a0001c0001t0008g0019 a0001c0001t0008g0020 a0001c0001t0008g0030 a0001c0001t0011g0091 a0001c0001t0011g0230 a0001c0001t0011g0232 a0001c0001t0012g0192 a0001c0001t0012g0194 a0001c0001t0015g0239 a0001c0001t0015g0240 a0001c0001t0017g0233 a0001c0001t0017g0235 a0001c0001t0019g0167 a0001c0001t0019g0203 a0001c0001t0020g0146 a0001c0001t0020g0164 a0001c0001t0023g0017 a0001c0001t0023g0021 a0001c0001t0025g0224 a0001c0001t0026g0231 a0001c0001t0027g0242 a0001c0001t0030g0243 a0001c0001t0031g0193 a0001c0001t0032g0093 a0001c0001t0033g0183 a0001c0001t0037g0116 a0001c0001t0038g0113 a0001c0001t0040g0140 a0002c0007t0012g0195	171	328	0.5213	-4	c.31 others(15): Show c.3106_*3109delTTTA	AGFG1	ENSG00000173744.18	transcript	ENST00000310078.13	protein_coding	13/13	3106	INFO_REALIGN_3_PRIME	chr2	TogoVar
AGFG1_chr2_227467156_227566217	227564244	TTGGG TTGGG	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp1 HG02273.hp1 HG03942.hp2 HG00099.hp1 HG02273.hp1 HG03942.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0003	a0001c0003t0003g0053 a0001c0003t0003g0068 a0001c0003t0003g0069 a0001c0003t0003g0053 a0001c0003t0003g0068 a0001c0003t0003g0069	3	328	0.0092	-4	c.97 others(15): Show c.9750_*9753delTGGG	AGFG1	ENSG00000173744.18	transcript	ENST00000310078.13	protein_coding		3028		chr2	TogoVar
AGFG1_chr2_227467156_227566217	227564271	GGTGT GGTGT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00609.hp1 HG01069.hp2 HG01071.hp1 others(43): Show HG00609.hp1 HG01069.hp2 HG01071.hp1 HG01106.hp1 HG01109.hp1 HG01346.hp2 HG01516.hp2 HG01891.hp1 HG02055.hp2 HG02071.hp1 HG02080.hp2 HG02257.hp1 HG02572.hp2 HG02602.hp1 HG02735.hp2 HG02818.hp1 HG03041.hp2 HG03540.hp2 HG03654.hp1 HG03688.hp2 HG03704.hp1 HG03710.hp1 HG03834.hp2 HG04115.hp1 HG04184.hp2 NA18747.hp1 NA18940.hp1 NA18948.hp1 NA18961.hp1 NA18966.hp1 NA18970.hp1 NA18980.hp2 NA18985.hp1 NA18986.hp1 NA18991.hp2 NA18999.hp2 NA19000.hp1 NA19001.hp1 NA19002.hp2 NA19004.hp2 NA19010.hp2 NA19062.hp1 NA19074.hp2 NA19082.hp2 NA19087.hp2 NA20752.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0002c0006 a0001c0002 a0002c0006	a0001c0002t0002 a0001c0002t0028 a0001c0002t0036 others(1): Show a0001c0002t0002 a0001c0002t0028 a0001c0002t0036 a0002c0006t0002	a0001c0002t0002g0005 a0001c0002t0002g0007 a0001c0002t0002g0008 others(43): Show a0001c0002t0002g0005 a0001c0002t0002g0007 a0001c0002t0002g0008 a0001c0002t0002g0013 a0001c0002t0002g0245 a0001c0002t0002g0248 a0001c0002t0002g0249 a0001c0002t0002g0251 a0001c0002t0002g0254 a0001c0002t0002g0255 a0001c0002t0002g0256 a0001c0002t0002g0257 a0001c0002t0002g0262 a0001c0002t0002g0263 a0001c0002t0002g0264 a0001c0002t0002g0265 a0001c0002t0002g0266 a0001c0002t0002g0268 a0001c0002t0002g0269 a0001c0002t0002g0270 a0001c0002t0002g0271 a0001c0002t0002g0272 a0001c0002t0002g0273 a0001c0002t0002g0277 a0001c0002t0002g0280 a0001c0002t0002g0282 a0001c0002t0002g0283 a0001c0002t0002g0284 a0001c0002t0002g0285 a0001c0002t0002g0286 a0001c0002t0002g0287 a0001c0002t0002g0288 a0001c0002t0002g0289 a0001c0002t0002g0290 a0001c0002t0002g0291 a0001c0002t0002g0292 a0001c0002t0002g0293 a0001c0002t0002g0294 a0001c0002t0002g0295 a0001c0002t0002g0296 a0001c0002t0002g0304 a0001c0002t0002g0305 a0001c0002t0002g0306 a0001c0002t0028g0303 a0001c0002t0036g0281 a0002c0006t0002g0260	46	328	0.1402	-4	c.97 others(15): Show c.9777_*9780delGTGT	AGFG1	ENSG00000173744.18	transcript	ENST00000310078.13	protein_coding		3055		chr2	TogoVar
AGFG1_chr2_227467156_227566217	227565736	CTCTG CTCTG	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00639.hp1 HG01081.hp2 HG02559.hp2 others(16): Show HG00639.hp1 HG01081.hp2 HG02559.hp2 HG02622.hp1 HG02895.hp2 HG02896.hp1 HG02897.hp1 HG02897.hp2 HG03098.hp1 HG03195.hp2 HG03453.hp2 HG03490.hp2 HG03492.hp2 HG03654.hp2 HG04115.hp2 NA19030.hp2 NA19043.hp1 NA20905.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0008 a0001c0001t0010 a0001c0001t0018 others(3): Show a0001c0001t0008 a0001c0001t0010 a0001c0001t0018 a0001c0001t0021 a0001c0001t0023 a0001c0005t0014	a0001c0001t0008g0014 a0001c0001t0008g0015 a0001c0001t0008g0016 others(16): Show a0001c0001t0008g0014 a0001c0001t0008g0015 a0001c0001t0008g0016 a0001c0001t0008g0018 a0001c0001t0008g0019 a0001c0001t0008g0020 a0001c0001t0008g0030 a0001c0001t0010g0026 a0001c0001t0010g0027 a0001c0001t0010g0028 a0001c0001t0010g0029 a0001c0001t0018g0024 a0001c0001t0018g0025 a0001c0001t0021g0237 a0001c0001t0021g0238 a0001c0001t0023g0017 a0001c0001t0023g0021 a0001c0005t0014g0022 a0001c0005t0014g0023	19	328	0.0579	-4	c.11 others(17): Show c.11242_*11245delTCTG	AGFG1	ENSG00000173744.18	transcript	ENST00000310078.13	protein_coding		4520		chr2	TogoVar
AGFG2_chr7_100534203_100573220	100536112	CTTCT CTTCT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00639.hp1 HG01081.hp2 HG01167.hp1 others(10): Show HG00639.hp1 HG01081.hp2 HG01167.hp1 HG01169.hp1 HG02922.hp1 HG02970.hp1 HG03098.hp1 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03669.hp2 NA18906.hp1 NA19043.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0003 a0002c0002t0001g0017 a0002c0002t0001g0204 others(8): Show a0002c0002t0001g0003 a0002c0002t0001g0017 a0002c0002t0001g0204 a0002c0002t0001g0215 a0002c0002t0001g0216 a0002c0002t0001g0217 a0002c0002t0001g0218 a0002c0002t0001g0219 a0002c0002t0001g0220 a0002c0002t0001g0221 a0002c0002t0001g0222	13	246	0.0529	-4	c.-32 others(15): Show c.-3234_-3231delTTCT	AGFG2	ENSG00000106351.13	transcript	ENST00000300176.9	protein_coding		3090		chr7	TogoVar
AGFG2_chr7_100534203_100573220	100551030	TTATA TTATA	T T	intron_variant intron_variant	MODIFIER	HG01074.hp2 HG01099.hp1 HG01192.hp2 others(7): Show HG01074.hp2 HG01099.hp1 HG01192.hp2 HG01361.hp1 HG01516.hp1 HG02723.hp1 HG02895.hp2 HG02897.hp2 HG03041.hp1 NA20805.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0004 a0001c0001t0001 a0002c0002t0004	a0001c0001t0001g0006 a0001c0001t0001g0022 a0001c0001t0001g0035 others(6): Show a0001c0001t0001g0006 a0001c0001t0001g0022 a0001c0001t0001g0035 a0001c0001t0001g0102 a0001c0001t0001g0104 a0002c0002t0004g0065 a0002c0002t0004g0112 a0002c0002t0004g0113 a0002c0002t0004g0114	10	246	0.0407	-4	c.431 others(19): Show c.431+553_431+556delATAT	AGFG2	ENSG00000106351.13	transcript	ENST00000300176.9	protein_coding	3/11		INFO_REALIGN_3_PRIME	chr7	TogoVar
AGGF1_chr5_77025404_77070234	77038332	CCTGT CCTGT	C C	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01978.hp1 HG02257.hp2 others(2): Show HG00639.hp2 HG01978.hp1 HG02257.hp2 HG02698.hp1 NA20805.hp1	a0001 a0006 a0001 a0006	a0001c0001 a0006c0006 a0001c0001 a0006c0006	a0001c0001t0004 a0006c0006t0004 a0001c0001t0004 a0006c0006t0004	a0001c0001t0004g0017 a0001c0001t0004g0093 a0001c0001t0004g0094 others(1): Show a0001c0001t0004g0017 a0001c0001t0004g0093 a0001c0001t0004g0094 a0006c0006t0004g0115	5	438	0.0114	-4	c.682 others(21): Show c.682-1196_682-1193delGTCT	AGGF1	ENSG00000164252.13	transcript	ENST00000312916.12	protein_coding	4/13		INFO_REALIGN_3_PRIME	chr5	TogoVar
AGGF1_chr5_77025404_77070234	77041785	TTTTA TTTTA	T T	intron_variant intron_variant	MODIFIER	HG02148.hp2 HG02559.hp2 HG02738.hp1 others(5): Show HG02148.hp2 HG02559.hp2 HG02738.hp1 HG02818.hp1 HG03453.hp1 HG03688.hp2 NA18522.hp1 NA19078.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 a0001c0001 a0001c0002 a0001c0004	a0001c0001t0012 a0001c0001t0013 a0001c0002t0003 others(1): Show a0001c0001t0012 a0001c0001t0013 a0001c0002t0003 a0001c0004t0007	a0001c0001t0012g0191 a0001c0001t0013g0342 a0001c0002t0003g0202 others(5): Show a0001c0001t0012g0191 a0001c0001t0013g0342 a0001c0002t0003g0202 a0001c0002t0003g0203 a0001c0002t0003g0313 a0001c0004t0007g0223 a0001c0004t0007g0224 a0001c0004t0007g0225	8	438	0.0183	-4	c.870 others(21): Show c.870+2094_870+2097delATTT	AGGF1	ENSG00000164252.13	transcript	ENST00000312916.12	protein_coding	5/13		INFO_REALIGN_3_PRIME	chr5	TogoVar
AGGF1_chr5_77025404_77070234	77042503	ACCTC ACCTC	A A	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01978.hp1 HG02257.hp2 others(1): Show HG00639.hp2 HG01978.hp1 HG02257.hp2 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0017 a0001c0001t0004g0093 a0001c0001t0004g0094 a0001c0001t0004g0017 a0001c0001t0004g0093 a0001c0001t0004g0094	4	438	0.0091	-4	c.870 others(21): Show c.870+2791_870+2794delTCCC	AGGF1	ENSG00000164252.13	transcript	ENST00000312916.12	protein_coding	5/13		INFO_REALIGN_3_PRIME	chr5	TogoVar
AGGF1_chr5_77025404_77070234	77042522	CGGCT CGGCT	C C	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01978.hp1 HG02257.hp2 others(1): Show HG00639.hp2 HG01978.hp1 HG02257.hp2 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0017 a0001c0001t0004g0093 a0001c0001t0004g0094 a0001c0001t0004g0017 a0001c0001t0004g0093 a0001c0001t0004g0094	4	438	0.0091	-4	c.870 others(21): Show c.870+2807_870+2810delTGGC	AGGF1	ENSG00000164252.13	transcript	ENST00000312916.12	protein_coding	5/13		INFO_REALIGN_3_PRIME	chr5	TogoVar
AGGF1_chr5_77025404_77070234	77045462	TGTTC TGTTC	T T	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00323.hp2 HG00621.hp1 others(37): Show HG00140.hp2 HG00323.hp2 HG00621.hp1 HG00639.hp2 HG00733.hp1 HG00735.hp2 HG00738.hp1 HG01069.hp1 HG01099.hp1 HG01106.hp1 HG01109.hp2 HG01123.hp2 HG01261.hp1 HG01346.hp1 HG01361.hp2 HG01952.hp2 HG01978.hp1 HG01993.hp1 HG02015.hp2 HG02148.hp1 HG02165.hp1 HG02257.hp2 HG02293.hp1 HG02683.hp1 HG02698.hp1 HG03239.hp2 HG03491.hp2 HG03492.hp2 HG03942.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18945.hp1 NA18957.hp1 NA18964.hp2 NA18974.hp1 NA19007.hp2 NA19090.hp1 NA20805.hp1 homoSapiens_chm13v2.hp1	a0001 a0006 a0001 a0006	a0001c0001 a0001c0007 a0006c0006 a0001c0001 a0001c0007 a0006c0006	a0001c0001t0004 a0001c0001t0021 a0001c0001t0024 others(2): Show a0001c0001t0004 a0001c0001t0021 a0001c0001t0024 a0001c0007t0004 a0006c0006t0004	a0001c0001t0004g0004 a0001c0001t0004g0015 a0001c0001t0004g0016 others(31): Show a0001c0001t0004g0004 a0001c0001t0004g0015 a0001c0001t0004g0016 a0001c0001t0004g0017 a0001c0001t0004g0093 a0001c0001t0004g0094 a0001c0001t0004g0095 a0001c0001t0004g0096 a0001c0001t0004g0097 a0001c0001t0004g0098 a0001c0001t0004g0099 a0001c0001t0004g0100 a0001c0001t0004g0101 a0001c0001t0004g0102 a0001c0001t0004g0104 a0001c0001t0004g0105 a0001c0001t0004g0106 a0001c0001t0004g0107 a0001c0001t0004g0108 a0001c0001t0004g0109 a0001c0001t0004g0110 a0001c0001t0004g0111 a0001c0001t0004g0112 a0001c0001t0004g0113 a0001c0001t0004g0114 a0001c0001t0004g0116 a0001c0001t0004g0117 a0001c0001t0004g0118 a0001c0001t0004g0119 a0001c0001t0004g0233 a0001c0001t0021g0103 a0001c0001t0024g0237 a0001c0007t0004g0004 a0006c0006t0004g0115	40	438	0.0913	-4	c.871 others(19): Show c.871-884_871-881delGTTC	AGGF1	ENSG00000164252.13	transcript	ENST00000312916.12	protein_coding	5/13			chr5	TogoVar
AGGF1_chr5_77025404_77070234	77050306	CTTTT CTTTT	C C	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00323.hp2 HG00423.hp2 others(93): Show HG00140.hp2 HG00323.hp2 HG00423.hp2 HG00544.hp1 HG00558.hp1 HG00597.hp1 HG00609.hp2 HG00621.hp1 HG00639.hp2 HG00673.hp1 HG00733.hp1 HG00735.hp2 HG00738.hp1 HG01069.hp1 HG01081.hp1 HG01099.hp1 HG01106.hp1 HG01109.hp2 HG01123.hp2 HG01256.hp1 HG01261.hp1 HG01346.hp1 HG01361.hp2 HG01952.hp2 HG01978.hp1 HG01993.hp1 HG02015.hp2 HG02040.hp2 HG02080.hp1 HG02083.hp1 HG02129.hp2 HG02148.hp1 HG02165.hp1 HG02257.hp2 HG02293.hp1 HG02683.hp1 HG02698.hp1 HG02717.hp2 HG02818.hp1 HG02886.hp2 HG02895.hp1 HG02897.hp1 HG02922.hp2 HG03239.hp2 HG03486.hp2 HG03491.hp2 HG03492.hp2 HG03688.hp2 HG03927.hp1 HG03942.hp1 HG04199.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18747.hp1 NA18943.hp1 NA18945.hp1 NA18945.hp2 NA18952.hp2 NA18954.hp1 NA18957.hp1 NA18957.hp2 NA18962.hp1 NA18964.hp2 NA18967.hp2 NA18968.hp1 NA18969.hp2 NA18971.hp1 NA18980.hp2 NA18985.hp1 NA18987.hp1 NA18988.hp1 NA18989.hp1 NA18994.hp1 NA18995.hp1 NA18998.hp1 NA18999.hp1 NA19001.hp2 NA19010.hp2 NA19056.hp2 NA19057.hp1 NA19058.hp1 NA19060.hp2 NA19062.hp2 NA19065.hp1 NA19068.hp1 NA19070.hp1 NA19072.hp1 NA19076.hp1 NA19084.hp2 NA19085.hp2 NA19090.hp1 NA20129.hp2 NA20752.hp1 NA20805.hp1 homoSapiens_chm13v2.hp1	a0001 a0005 a0006 a0001 a0005 a0006	a0001c0001 a0001c0004 a0001c0007 others(2): Show a0001c0001 a0001c0004 a0001c0007 a0005c0009 a0006c0006	a0001c0001t0001 a0001c0001t0004 a0001c0001t0010 others(6): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0010 a0001c0001t0023 a0001c0001t0024 a0001c0004t0007 a0001c0007t0004 a0005c0009t0001 a0006c0006t0004	a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0018 others(82): Show a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0018 a0001c0001t0001g0020 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0145 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0166 a0001c0001t0001g0170 a0001c0001t0001g0177 a0001c0001t0001g0178 a0001c0001t0001g0179 a0001c0001t0001g0181 a0001c0001t0001g0182 a0001c0001t0001g0183 a0001c0001t0001g0184 a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0217 a0001c0001t0001g0219 a0001c0001t0004g0004 a0001c0001t0004g0015 a0001c0001t0004g0016 a0001c0001t0004g0017 a0001c0001t0004g0093 a0001c0001t0004g0094 a0001c0001t0004g0095 a0001c0001t0004g0096 a0001c0001t0004g0097 a0001c0001t0004g0098 a0001c0001t0004g0099 a0001c0001t0004g0100 a0001c0001t0004g0101 a0001c0001t0004g0102 a0001c0001t0004g0105 a0001c0001t0004g0106 a0001c0001t0004g0107 a0001c0001t0004g0108 a0001c0001t0004g0109 a0001c0001t0004g0110 a0001c0001t0004g0111 a0001c0001t0004g0112 a0001c0001t0004g0113 a0001c0001t0004g0114 a0001c0001t0004g0116 a0001c0001t0004g0117 a0001c0001t0004g0118 a0001c0001t0004g0119 a0001c0001t0004g0233 a0001c0001t0010g0162 a0001c0001t0010g0169 a0001c0001t0023g0008 a0001c0001t0024g0237 a0001c0004t0007g0220 a0001c0004t0007g0221 a0001c0004t0007g0222 a0001c0004t0007g0224 a0001c0004t0007g0225 a0001c0007t0004g0004 a0005c0009t0001g0234 a0006c0006t0004g0115	96	438	0.2192	-4	c.136 others(23): Show c.1365+1345_1365+1348delTTTT	AGGF1	ENSG00000164252.13	transcript	ENST00000312916.12	protein_coding	8/13		INFO_REALIGN_3_PRIME	chr5	TogoVar
AGGF1_chr5_77025404_77070234	77059846	ATTTG ATTTG	A A	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG02055.hp1 HG02886.hp1 others(1): Show HG00735.hp1 HG02055.hp1 HG02886.hp1 HG03225.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0023 a0001c0002t0003g0245 a0001c0002t0003g0248 a0001c0002t0003g0023 a0001c0002t0003g0245 a0001c0002t0003g0248	4	438	0.0091	-4	c.184 others(21): Show c.1844+107_1844+110delGTTT	AGGF1	ENSG00000164252.13	transcript	ENST00000312916.12	protein_coding	12/13		INFO_REALIGN_3_PRIME	chr5	TogoVar
AGK_chr7_141546410_141660244	141551808	GGGTT GGGTT	G G	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG01168.hp1 HG02698.hp2 others(2): Show HG00642.hp2 HG01168.hp1 HG02698.hp2 HG03710.hp2 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0014 a0001c0001t0001 a0001c0001t0014	a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 others(2): Show a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0014g0006	5	274	0.0183	-4	c.-15 others(19): Show c.-15+383_-15+386delGGTT	AGK	ENSG00000006530.18	transcript	ENST00000649286.2	protein_coding	1/15		INFO_REALIGN_3_PRIME	chr7	TogoVar
AGK_chr7_141546410_141660244	141564469	AACTC AACTC	A A	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG01255.hp2 HG01884.hp2 others(18): Show HG00642.hp1 HG01255.hp2 HG01884.hp2 HG01943.hp2 HG02080.hp1 HG02155.hp2 HG02258.hp2 HG02559.hp2 HG02602.hp1 HG02698.hp1 HG02735.hp1 HG03041.hp2 HG03491.hp2 HG03688.hp1 HG04228.hp1 NA18951.hp1 NA18990.hp1 NA19056.hp1 NA19068.hp2 NA19089.hp2 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0106 a0001c0001t0001g0108 others(18): Show a0001c0001t0001g0011 a0001c0001t0001g0106 a0001c0001t0001g0108 a0001c0001t0001g0116 a0001c0001t0001g0123 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0164 a0001c0001t0001g0203	21	274	0.0766	-4	c.101 others(21): Show c.101+8910_101+8913delCACT	AGK	ENSG00000006530.18	transcript	ENST00000649286.2	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr7	TogoVar
AGK_chr7_141546410_141660244	141575654	CTTTT CTTTT	C C	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG02155.hp1 HG02630.hp1 others(15): Show HG00408.hp1 HG02155.hp1 HG02630.hp1 HG02738.hp1 HG02922.hp2 HG03688.hp2 HG03704.hp2 HG03831.hp2 HG03942.hp1 NA18906.hp2 NA18949.hp1 NA18949.hp2 NA18959.hp1 NA18992.hp2 NA18997.hp1 NA19064.hp1 NA19079.hp1 NA19089.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0017 a0003c0003t0010	a0001c0001t0001g0228 a0001c0001t0002g0230 a0001c0001t0002g0234 others(15): Show a0001c0001t0001g0228 a0001c0001t0002g0230 a0001c0001t0002g0234 a0001c0001t0002g0235 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0238 a0001c0001t0002g0239 a0001c0001t0002g0240 a0001c0001t0002g0246 a0001c0001t0002g0247 a0001c0001t0002g0250 a0001c0001t0002g0251 a0001c0001t0004g0255 a0001c0001t0005g0261 a0001c0001t0005g0262 a0001c0001t0017g0244 a0003c0003t0010g0227	18	274	0.0657	-4	c.102 others(23): Show c.102-17466_102-17463delTTTT	AGK	ENSG00000006530.18	transcript	ENST00000649286.2	protein_coding	2/15		INFO_REALIGN_3_PRIME	chr7	TogoVar
AGK_chr7_141546410_141660244	141597890	CAAAA CAAAA	C C	intron_variant intron_variant	MODIFIER	HG01168.hp2 HG02486.hp1 HG02896.hp1 others(3): Show HG01168.hp2 HG02486.hp1 HG02896.hp1 HG03453.hp1 NA18949.hp2 NA19079.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0002 a0001c0001t0005 a0002c0002t0003 a0001c0001t0002 a0001c0001t0005 a0002c0002t0003	a0001c0001t0002g0242 a0001c0001t0002g0243 a0001c0001t0002g0263 others(3): Show a0001c0001t0002g0242 a0001c0001t0002g0243 a0001c0001t0002g0263 a0001c0001t0005g0261 a0001c0001t0005g0262 a0002c0002t0003g0270	6	274	0.0219	-4	c.221 others(21): Show c.221+1275_221+1278delAAAA	AGK	ENSG00000006530.18	transcript	ENST00000649286.2	protein_coding	4/15		INFO_REALIGN_3_PRIME	chr7	TogoVar
AGK_chr7_141546410_141660244	141604374	GTATA GTATA	G G	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG01168.hp2 HG01952.hp2 others(20): Show HG00408.hp1 HG01168.hp2 HG01952.hp2 HG02015.hp1 HG02155.hp1 HG02486.hp1 HG02602.hp2 HG02738.hp1 HG02818.hp2 HG03130.hp1 HG03453.hp1 HG03579.hp2 HG03688.hp2 HG03704.hp2 HG03831.hp2 HG03927.hp1 HG03942.hp1 NA18949.hp1 NA18959.hp1 NA18992.hp2 NA19064.hp1 NA19074.hp2 NA19078.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0004c0004 a0001c0001 a0004c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0017 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0017 a0004c0004t0002	a0001c0001t0001g0196 a0001c0001t0002g0229 a0001c0001t0002g0230 others(20): Show a0001c0001t0001g0196 a0001c0001t0002g0229 a0001c0001t0002g0230 a0001c0001t0002g0231 a0001c0001t0002g0232 a0001c0001t0002g0233 a0001c0001t0002g0235 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0238 a0001c0001t0002g0239 a0001c0001t0002g0240 a0001c0001t0002g0241 a0001c0001t0002g0242 a0001c0001t0002g0243 a0001c0001t0002g0246 a0001c0001t0002g0248 a0001c0001t0002g0249 a0001c0001t0002g0250 a0001c0001t0002g0251 a0001c0001t0002g0263 a0001c0001t0017g0244 a0004c0004t0002g0245	23	274	0.0839	-4	c.297 others(21): Show c.297+3121_297+3124delTATA	AGK	ENSG00000006530.18	transcript	ENST00000649286.2	protein_coding	5/15		INFO_REALIGN_3_PRIME	chr7	TogoVar
AGK_chr7_141546410_141660244	141619685	GCAAA GCAAA	G G	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02109.hp2 HG02965.hp1 HG02055.hp1 HG02109.hp2 HG02965.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0224 a0001c0001t0006g0225 a0001c0001t0006g0226 a0001c0001t0006g0224 a0001c0001t0006g0225 a0001c0001t0006g0226	3	274	0.0110	-4	c.519 others(21): Show c.519-2042_519-2039delCAAA	AGK	ENSG00000006530.18	transcript	ENST00000649286.2	protein_coding	8/15		INFO_REALIGN_3_PRIME	chr7	TogoVar
AGK_chr7_141546410_141660244	141632245	CAAAA CAAAA	C C	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01099.hp2 HG01243.hp2 others(1): Show HG01070.hp1 HG01099.hp2 HG01243.hp2 HG01516.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0165 others(1): Show a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0165 a0001c0001t0001g0166	4	274	0.0146	-4	c.589 others(21): Show c.589-1651_589-1648delAAAA	AGK	ENSG00000006530.18	transcript	ENST00000649286.2	protein_coding	9/15		INFO_REALIGN_3_PRIME	chr7	TogoVar
AGK_chr7_141546410_141660244	141644750	ATAAG ATAAG	A A	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02109.hp2 HG02922.hp2 others(2): Show HG02055.hp1 HG02109.hp2 HG02922.hp2 HG02965.hp1 NA18906.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0001 a0001c0001t0006 a0003c0003t0010 a0001c0001t0001 a0001c0001t0006 a0003c0003t0010	a0001c0001t0001g0228 a0001c0001t0006g0224 a0001c0001t0006g0225 others(2): Show a0001c0001t0001g0228 a0001c0001t0006g0224 a0001c0001t0006g0225 a0001c0001t0006g0226 a0003c0003t0010g0227	5	274	0.0183	-4	c.975 others(21): Show c.975+2844_975+2847delAAGT	AGK	ENSG00000006530.18	transcript	ENST00000649286.2	protein_coding	13/15		INFO_REALIGN_3_PRIME	chr7	TogoVar
AGK_chr7_141546410_141660244	141646372	CAATT CAATT	C C	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02965.hp2 HG03209.hp1 others(2): Show HG02630.hp1 HG02965.hp2 HG03209.hp1 HG03540.hp2 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0003 a0001c0001t0004g0254 a0001c0001t0004g0255 others(1): Show a0001c0001t0004g0003 a0001c0001t0004g0254 a0001c0001t0004g0255 a0001c0001t0004g0256	5	274	0.0183	-4	c.976 others(21): Show c.976-2889_976-2886delATTA	AGK	ENSG00000006530.18	transcript	ENST00000649286.2	protein_coding	13/15		INFO_REALIGN_3_PRIME	chr7	TogoVar
AGL_chr1_99845361_99929020	99848065	CTTTT CTTTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp1 HG00140.hp2 HG00741.hp2 others(76): Show HG00140.hp1 HG00140.hp2 HG00741.hp2 HG01109.hp2 HG01169.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01361.hp2 HG01517.hp1 HG01884.hp2 HG01891.hp1 HG01981.hp1 HG02004.hp1 HG02027.hp1 HG02040.hp2 HG02129.hp1 HG02132.hp1 HG02135.hp1 HG02165.hp1 HG02258.hp1 HG02486.hp1 HG02486.hp2 HG02559.hp1 HG02572.hp1 HG02602.hp1 HG02602.hp2 HG02647.hp2 HG02717.hp2 HG02723.hp1 HG02738.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp2 HG03017.hp1 HG03209.hp1 HG03209.hp2 HG03490.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03669.hp2 HG03688.hp1 HG03942.hp2 HG04199.hp1 HG06807.hp1 NA18939.hp2 NA18942.hp1 NA18945.hp2 NA18947.hp2 NA18949.hp1 NA18951.hp1 NA18962.hp1 NA18963.hp2 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18978.hp1 NA18980.hp2 NA18981.hp2 NA18983.hp1 NA18999.hp1 NA19003.hp2 NA19005.hp1 NA19010.hp1 NA19012.hp2 NA19030.hp1 NA19043.hp1 NA19043.hp2 NA19056.hp1 NA19057.hp1 NA19060.hp2 NA19064.hp2 NA19066.hp1 NA19240.hp1 NA20300.hp2 NA21309.hp1	a0001 a0002 a0003 others(8): Show a0001 a0002 a0003 a0004 a0005 a0006 a0013 a0014 a0016 a0021 a0022	a0001c0001 a0002c0007 a0003c0006 others(8): Show a0001c0001 a0002c0007 a0003c0006 a0004c0005 a0005c0004 a0006c0008 a0013c0033 a0014c0030 a0016c0028 a0021c0025 a0022c0023	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(14): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0008 a0001c0001t0011 a0002c0007t0002 a0002c0007t0005 a0002c0007t0006 a0003c0006t0008 a0004c0005t0002 a0005c0004t0004 a0006c0008t0008 a0013c0033t0004 a0014c0030t0006 a0016c0028t0002 a0021c0025t0001 a0022c0023t0004	a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0259 others(69): Show a0001c0001t0001g0004 a0001c0001t0001g0005 a0001c0001t0001g0259 a0001c0001t0001g0270 a0001c0001t0001g0271 a0001c0001t0001g0272 a0001c0001t0001g0273 a0001c0001t0001g0275 a0001c0001t0001g0277 a0001c0001t0001g0278 a0001c0001t0001g0280 a0001c0001t0001g0281 a0001c0001t0001g0282 a0001c0001t0001g0283 a0001c0001t0001g0284 a0001c0001t0001g0285 a0001c0001t0001g0286 a0001c0001t0001g0288 a0001c0001t0001g0289 a0001c0001t0001g0291 a0001c0001t0001g0293 a0001c0001t0001g0294 a0001c0001t0001g0295 a0001c0001t0002g0170 a0001c0001t0002g0297 a0001c0001t0003g0011 a0001c0001t0003g0217 a0001c0001t0003g0218 a0001c0001t0003g0219 a0001c0001t0003g0220 a0001c0001t0003g0221 a0001c0001t0003g0222 a0001c0001t0003g0223 a0001c0001t0003g0224 a0001c0001t0003g0225 a0001c0001t0003g0226 a0001c0001t0003g0227 a0001c0001t0003g0248 a0001c0001t0008g0260 a0001c0001t0011g0228 a0002c0007t0002g0146 a0002c0007t0005g0279 a0002c0007t0005g0287 a0002c0007t0005g0290 a0002c0007t0006g0269 a0003c0006t0008g0191 a0004c0005t0002g0125 a0005c0004t0004g0013 a0005c0004t0004g0014 a0005c0004t0004g0015 a0005c0004t0004g0250 a0005c0004t0004g0251 a0005c0004t0004g0253 a0005c0004t0004g0254 a0005c0004t0004g0255 a0005c0004t0004g0256 a0005c0004t0004g0257 a0005c0004t0004g0258 a0005c0004t0004g0261 a0005c0004t0004g0262 a0005c0004t0004g0263 a0005c0004t0004g0264 a0005c0004t0004g0265 a0005c0004t0004g0266 a0005c0004t0004g0267 a0005c0004t0004g0268 a0006c0008t0008g0016 a0013c0033t0004g0014 a0014c0030t0006g0274 a0016c0028t0002g0249 a0021c0025t0001g0296 a0022c0023t0004g0015	79	318	0.2484	-4	c.-24 others(15): Show c.-2418_-2415delTTTT	AGL	ENSG00000162688.17	transcript	ENST00000361915.8	protein_coding		2295		chr1	TogoVar
AGL_chr1_99845361_99929020	99856374	CCCTT CCCTT	C C	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG03927.hp2 NA20752.hp1 HG01167.hp2 HG03927.hp2 NA20752.hp1	a0011 a0023 a0011 a0023	a0011c0011 a0023c0016 a0011c0011 a0023c0016	a0011c0011t0014 a0023c0016t0023 a0011c0011t0014 a0023c0016t0023	a0011c0011t0014g0204 a0011c0011t0014g0247 a0023c0016t0023g0205 a0011c0011t0014g0204 a0011c0011t0014g0247 a0023c0016t0023g0205	3	318	0.0094	-4	c.83- others(19): Show c.83-5125_83-5122delTCCT	AGL	ENSG00000162688.17	transcript	ENST00000361915.8	protein_coding	2/33		INFO_REALIGN_3_PRIME	chr1	TogoVar
AGL_chr1_99845361_99929020	99871410	GCCCC GCCCC	G G	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02109.hp1 HG02109.hp2 others(12): Show HG01891.hp2 HG02109.hp1 HG02109.hp2 HG02258.hp2 HG02559.hp2 HG02572.hp2 HG03098.hp1 HG03098.hp2 HG03139.hp1 HG03139.hp2 HG03486.hp2 HG03516.hp1 HG06807.hp2 NA18522.hp2 NA19240.hp2	a0001 a0006 a0009 others(3): Show a0001 a0006 a0009 a0017 a0018 a0020	a0001c0001 a0001c0031 a0006c0008 others(4): Show a0001c0001 a0001c0031 a0006c0008 a0009c0032 a0017c0027 a0018c0026 a0020c0029	a0001c0001t0001 a0001c0001t0009 a0001c0031t0006 others(5): Show a0001c0001t0001 a0001c0001t0009 a0001c0031t0006 a0006c0008t0008 a0009c0032t0004 a0017c0027t0013 a0018c0026t0009 a0020c0029t0013	a0001c0001t0001g0010 a0001c0001t0001g0212 a0001c0001t0001g0213 others(11): Show a0001c0001t0001g0010 a0001c0001t0001g0212 a0001c0001t0001g0213 a0001c0001t0001g0215 a0001c0001t0001g0244 a0001c0001t0001g0245 a0001c0001t0009g0104 a0001c0001t0009g0105 a0001c0031t0006g0246 a0006c0008t0008g0203 a0009c0032t0004g0216 a0017c0027t0013g0202 a0018c0026t0009g0211 a0020c0029t0013g0214	15	318	0.0472	-4	c.958 others(19): Show c.958+551_958+554delCCCC	AGL	ENSG00000162688.17	transcript	ENST00000361915.8	protein_coding	7/33		INFO_REALIGN_3_PRIME	chr1	TogoVar
AGL_chr1_99845361_99929020	99894655	AAACT AAACT	A A	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG03130.hp2 HG03225.hp2 HG02622.hp1 HG03130.hp2 HG03225.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0006 a0001c0001 a0003c0006	a0001c0001t0006 a0003c0006t0006 a0001c0001t0006 a0003c0006t0006	a0001c0001t0006g0206 a0003c0006t0006g0193 a0003c0006t0006g0194 a0001c0001t0006g0206 a0003c0006t0006g0193 a0003c0006t0006g0194	3	318	0.0094	-4	c.326 others(23): Show c.3260-1627_3260-1624delTAAC	AGL	ENSG00000162688.17	transcript	ENST00000361915.8	protein_coding	24/33		INFO_REALIGN_3_PRIME	chr1	TogoVar
AGL_chr1_99845361_99929020	99899606	TTTCC TTTCC	T T	intron_variant intron_variant	MODIFIER	HG01069.hp1 HG01071.hp1 HG01167.hp1 others(1): Show HG01069.hp1 HG01071.hp1 HG01167.hp1 HG01169.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0042 a0001c0002t0001g0044 a0001c0002t0001g0059 others(1): Show a0001c0002t0001g0042 a0001c0002t0001g0044 a0001c0002t0001g0059 a0001c0002t0001g0084	4	318	0.0126	-4	c.336 others(23): Show c.3363-1026_3363-1023delCTTC	AGL	ENSG00000162688.17	transcript	ENST00000361915.8	protein_coding	25/33		INFO_REALIGN_3_PRIME	chr1	TogoVar
AGL_chr1_99845361_99929020	99901830	ATATT ATATT	A A	intron_variant intron_variant	MODIFIER	HG01261.hp1 HG02132.hp1 HG02165.hp1 others(5): Show HG01261.hp1 HG02132.hp1 HG02165.hp1 HG03098.hp1 HG03942.hp2 HG04199.hp1 NA18942.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0031 a0001c0001 a0001c0031	a0001c0001t0003 a0001c0031t0006 a0001c0001t0003 a0001c0031t0006	a0001c0001t0003g0218 a0001c0001t0003g0219 a0001c0001t0003g0221 others(5): Show a0001c0001t0003g0218 a0001c0001t0003g0219 a0001c0001t0003g0221 a0001c0001t0003g0222 a0001c0001t0003g0224 a0001c0001t0003g0225 a0001c0001t0003g0248 a0001c0031t0006g0246	8	318	0.0252	-4	c.358 others(21): Show c.3589-845_3589-842delTTAT	AGL	ENSG00000162688.17	transcript	ENST00000361915.8	protein_coding	26/33		INFO_REALIGN_3_PRIME	chr1	TogoVar
AGMAT_chr1_15566699_15590051	15575729	TTTTA TTTTA	T T	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG02896.hp2 HG02897.hp2 others(6): Show HG00408.hp2 HG02896.hp2 HG02897.hp2 HG03540.hp2 NA18989.hp2 NA18993.hp2 NA19043.hp2 NA19072.hp2 NA20752.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0002 a0002c0001 a0003c0003 others(1): Show a0001c0002 a0002c0001 a0003c0003 a0004c0011	a0001c0002t0002 a0002c0001t0003 a0003c0003t0021 others(2): Show a0001c0002t0002 a0002c0001t0003 a0003c0003t0021 a0004c0011t0041 a0004c0011t0083	a0001c0002t0002g0122 a0002c0001t0003g0241 a0002c0001t0003g0261 others(5): Show a0001c0002t0002g0122 a0002c0001t0003g0241 a0002c0001t0003g0261 a0003c0003t0021g0054 a0003c0003t0021g0080 a0003c0003t0021g0081 a0004c0011t0041g0040 a0004c0011t0083g0209	9	390	0.0231	-4	c.901 others(19): Show c.901-892_901-889delTAAA	AGMAT	ENSG00000116771.6	transcript	ENST00000375826.4	protein_coding	5/6			chr1	TogoVar
AGMAT_chr1_15566699_15590051	15586050	AAAAT AAAAT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00642.hp2 HG00673.hp2 HG01070.hp2 others(56): Show HG00642.hp2 HG00673.hp2 HG01070.hp2 HG01071.hp2 HG01106.hp1 HG01109.hp2 HG01123.hp2 HG01243.hp1 HG01257.hp1 HG01496.hp2 HG01884.hp2 HG01934.hp2 HG02040.hp2 HG02132.hp1 HG02145.hp1 HG02148.hp2 HG02258.hp2 HG02486.hp1 HG02572.hp1 HG02602.hp1 HG02615.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02896.hp2 HG02897.hp2 HG02965.hp1 HG02976.hp2 HG03017.hp1 HG03041.hp1 HG03195.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03710.hp2 HG03834.hp2 HG06807.hp2 NA18939.hp2 NA18963.hp1 NA18971.hp2 NA18983.hp2 NA18989.hp1 NA18989.hp2 NA18993.hp2 NA19002.hp1 NA19057.hp1 NA19072.hp2 NA19080.hp1 NA19085.hp1 NA19087.hp1 NA19088.hp1 NA19240.hp2 NA20129.hp1 NA20300.hp2 NA21309.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0002 a0001c0013 a0002c0001 others(2): Show a0001c0002 a0001c0013 a0002c0001 a0003c0003 a0004c0011	a0001c0002t0002 a0001c0002t0004 a0001c0002t0007 others(24): Show a0001c0002t0002 a0001c0002t0004 a0001c0002t0007 a0001c0002t0009 a0001c0002t0019 a0001c0002t0028 a0001c0002t0045 a0001c0002t0051 a0001c0013t0078 a0001c0013t0080 a0002c0001t0001 a0002c0001t0003 a0002c0001t0008 a0002c0001t0018 a0002c0001t0040 a0003c0003t0005 a0003c0003t0006 a0003c0003t0010 a0003c0003t0011 a0003c0003t0013 a0003c0003t0021 a0003c0003t0030 a0003c0003t0034 a0003c0003t0055 a0003c0003t0056 a0004c0011t0041 a0004c0011t0083	a0001c0002t0002g0004 a0001c0002t0002g0010 a0001c0002t0002g0142 others(49): Show a0001c0002t0002g0004 a0001c0002t0002g0010 a0001c0002t0002g0142 a0001c0002t0002g0154 a0001c0002t0002g0171 a0001c0002t0002g0192 a0001c0002t0002g0196 a0001c0002t0004g0038 a0001c0002t0004g0121 a0001c0002t0007g0016 a0001c0002t0007g0144 a0001c0002t0009g0017 a0001c0002t0009g0119 a0001c0002t0009g0125 a0001c0002t0009g0143 a0001c0002t0019g0124 a0001c0002t0019g0128 a0001c0002t0028g0165 a0001c0002t0045g0135 a0001c0002t0051g0129 a0001c0013t0078g0208 a0001c0013t0080g0206 a0002c0001t0001g0023 a0002c0001t0001g0042 a0002c0001t0001g0214 a0002c0001t0001g0222 a0002c0001t0001g0239 a0002c0001t0001g0266 a0002c0001t0001g0276 a0002c0001t0003g0224 a0002c0001t0008g0227 a0002c0001t0008g0229 a0002c0001t0008g0250 a0002c0001t0018g0216 a0002c0001t0040g0235 a0003c0003t0005g0063 a0003c0003t0006g0014 a0003c0003t0010g0013 a0003c0003t0010g0055 a0003c0003t0010g0079 a0003c0003t0011g0060 a0003c0003t0013g0061 a0003c0003t0013g0066 a0003c0003t0021g0054 a0003c0003t0021g0080 a0003c0003t0021g0081 a0003c0003t0030g0077 a0003c0003t0034g0076 a0003c0003t0055g0056 a0003c0003t0056g0057 a0004c0011t0041g0040 a0004c0011t0083g0209	59	390	0.1513	-4	c.-10 others(15): Show c.-1087_-1084delATTT	AGMAT	ENSG00000116771.6	transcript	ENST00000375826.4	protein_coding		1000		chr1	TogoVar
AGMO_chr7_15195317_15567015	15198196	CGAGA CGAGA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01175.hp1 HG02155.hp1 HG02155.hp2 others(6): Show HG01175.hp1 HG02155.hp1 HG02155.hp2 HG02630.hp2 HG02970.hp2 HG03195.hp2 NA19063.hp2 NA19064.hp2 NA20129.hp1	a0001 a0012 a0001 a0012	a0001c0001 a0001c0005 a0012c0015 a0001c0001 a0001c0005 a0012c0015	a0001c0001t0001 a0001c0005t0001 a0012c0015t0006 a0001c0001t0001 a0001c0005t0001 a0012c0015t0006	a0001c0001t0001g0067 a0001c0001t0001g0089 a0001c0001t0001g0090 others(6): Show a0001c0001t0001g0067 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0128 a0001c0001t0001g0135 a0001c0001t0001g0161 a0001c0001t0001g0205 a0001c0005t0001g0018 a0012c0015t0006g0230	9	236	0.0381	-4	c.30 others(15): Show c.3085_*3088delTCTC	AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding		2120		chr7	TogoVar
AGMO_chr7_15195317_15567015	15198253	GAGAC GAGAC	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02572.hp1 NA18612.hp2 NA19078.hp1 others(1): Show HG02572.hp1 NA18612.hp2 NA19078.hp1 NA20300.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0006 a0001c0001 a0003c0006	a0001c0001t0001 a0001c0001t0002 a0003c0006t0004 a0001c0001t0001 a0001c0001t0002 a0003c0006t0004	a0001c0001t0001g0183 a0001c0001t0002g0037 a0001c0001t0002g0092 others(1): Show a0001c0001t0001g0183 a0001c0001t0002g0037 a0001c0001t0002g0092 a0003c0006t0004g0076	4	236	0.0170	-4	c.30 others(15): Show c.3028_*3031delGTCT	AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding		2063		chr7	TogoVar
AGMO_chr7_15195317_15567015	15200504	TTTTC TTTTC	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02257.hp2 HG02886.hp1 HG02922.hp2 others(2): Show HG02257.hp2 HG02886.hp1 HG02922.hp2 HG02965.hp1 NA19043.hp2	a0002 a0003 a0008 a0002 a0003 a0008	a0002c0002 a0002c0004 a0003c0009 others(1): Show a0002c0002 a0002c0004 a0003c0009 a0008c0023	a0002c0002t0007 a0002c0004t0007 a0003c0009t0007 others(1): Show a0002c0002t0007 a0002c0004t0007 a0003c0009t0007 a0008c0023t0007	a0002c0002t0007g0217 a0002c0004t0007g0003 a0002c0004t0007g0008 others(2): Show a0002c0002t0007g0217 a0002c0004t0007g0003 a0002c0004t0007g0008 a0003c0009t0007g0005 a0008c0023t0007g0227	5	236	0.0212	-4	c.77 others(13): Show c.777_*780delGAAA	AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding	13/13	777		chr7	TogoVar
AGMO_chr7_15195317_15567015	15212247	TACAC TACAC	T T	intron_variant intron_variant	MODIFIER	HG01074.hp2 HG01255.hp1 HG01257.hp2 others(8): Show HG01074.hp2 HG01255.hp1 HG01257.hp2 HG01884.hp2 HG02109.hp1 HG02572.hp1 HG03139.hp1 HG03195.hp2 HG03471.hp2 HG03579.hp1 NA18951.hp2	a0001 a0006 a0007 a0001 a0006 a0007	a0001c0001 a0001c0003 a0001c0005 others(2): Show a0001c0001 a0001c0003 a0001c0005 a0006c0012 a0007c0024	a0001c0001t0001 a0001c0001t0004 a0001c0003t0001 others(3): Show a0001c0001t0001 a0001c0001t0004 a0001c0003t0001 a0001c0005t0001 a0006c0012t0003 a0007c0024t0004	a0001c0001t0001g0101 a0001c0001t0001g0139 a0001c0001t0001g0140 others(8): Show a0001c0001t0001g0101 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0183 a0001c0001t0001g0185 a0001c0001t0001g0206 a0001c0001t0004g0031 a0001c0003t0001g0068 a0001c0005t0001g0018 a0006c0012t0003g0223 a0007c0024t0004g0224	11	236	0.0466	-4	c.126 others(25): Show c.1264-10892_1264-10889delGTGT	AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding	12/12			chr7	TogoVar
AGMO_chr7_15195317_15567015	15216833	AGTGT AGTGT	A A	intron_variant intron_variant	MODIFIER	HG03834.hp2 NA18522.hp1 HG03834.hp2 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0003t0002 a0001c0001t0001 a0001c0003t0002	a0001c0001t0001g0163 a0001c0003t0002g0188 a0001c0001t0001g0163 a0001c0003t0002g0188	2	236	0.0085	-4	c.126 others(25): Show c.1264-15478_1264-15475delACAC	AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding	12/12			chr7	TogoVar
AGMO_chr7_15195317_15567015	15220208	CTTTT CTTTT	C C	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG00597.hp2 HG02056.hp2 others(3): Show HG00544.hp2 HG00597.hp2 HG02056.hp2 NA18946.hp1 NA19063.hp1 NA19084.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0052 a0001c0001t0001g0080 a0001c0001t0001g0110 others(3): Show a0001c0001t0001g0052 a0001c0001t0001g0080 a0001c0001t0001g0110 a0001c0001t0001g0121 a0001c0001t0001g0157 a0001c0001t0001g0174	6	236	0.0254	-4	c.126 others(25): Show c.1264-18853_1264-18850delAAAA	AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding	12/12			chr7	TogoVar
AGMO_chr7_15195317_15567015	15223833	CAATT CAATT	C C	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01243.hp2 HG02451.hp2 others(7): Show HG00639.hp2 HG01243.hp2 HG02451.hp2 HG02486.hp2 HG02622.hp1 HG02922.hp1 HG03098.hp1 HG03195.hp1 NA18522.hp2 NA18906.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0001c0007 others(3): Show a0001c0001 a0001c0003 a0001c0007 a0001c0011 a0001c0018 a0002c0004	a0001c0001t0001 a0001c0003t0001 a0001c0007t0001 others(4): Show a0001c0001t0001 a0001c0003t0001 a0001c0007t0001 a0001c0007t0003 a0001c0011t0001 a0001c0018t0001 a0002c0004t0001	a0001c0001t0001g0173 a0001c0001t0001g0179 a0001c0003t0001g0034 others(7): Show a0001c0001t0001g0173 a0001c0001t0001g0179 a0001c0003t0001g0034 a0001c0003t0001g0041 a0001c0007t0001g0015 a0001c0007t0001g0016 a0001c0007t0003g0014 a0001c0011t0001g0210 a0001c0018t0001g0191 a0002c0004t0001g0010	10	236	0.0424	-4	c.126 others(25): Show c.1264-22478_1264-22475delAATT	AGMO	ENSG00000187546.14	transcript	ENST00000342526.8	protein_coding	12/12			chr7	TogoVar

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