regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
CHST14_chr15_40465984_40478158 | 40475884 | CTAATTTT others(33): Show |
C | downstream_gene_variant | MODIFIER | HG00642.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0000 | 1 | 412 | 0.0024 | -40 | c.*35 others(51): Show |
CHST14 | ENSG00000169105.8 | transcript | ENST00000306243.7 | protein_coding | 2727 | chr15 | TogoVar | ||||||
CHST8_chr19_33616953_33778506 | 33757387 | GAAGAAAG others(33): Show |
G | intron_variant | MODIFIER | NA20300.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0030 | 1 | 254 | 0.0039 | -40 | c.131 others(59): Show |
CHST8 | ENSG00000124302.13 | transcript | ENST00000650847.1 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | |||||
CHST8_chr19_33616953_33778506 | 33757486 | GAAAGAAA others(33): Show |
G | intron_variant | MODIFIER | HG01943.hp1 HG02273.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0108a0001c0001t0001g0109 | 2 | 254 | 0.0079 | -40 | c.131 others(59): Show |
CHST8 | ENSG00000124302.13 | transcript | ENST00000650847.1 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | |||||
CHST8_chr19_33616953_33778506 | 33757490 | GAAAGAAA others(33): Show |
G | intron_variant | MODIFIER | NA19070.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0150 | 1 | 254 | 0.0039 | -40 | c.131 others(59): Show |
CHST8 | ENSG00000124302.13 | transcript | ENST00000650847.1 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | |||||
CIP2A_chr3_108544864_108594438 | 108575300 | GTACGTAC others(33): Show |
G | intron_variant | MODIFIER | HG01884.hp2 NA20300.hp1 |
a0006 | a0006c0007 | a0006c0007t0003 | a0006c0007t0003g0355a0006c0007t0003g0356 | 2 | 372 | 0.0054 | -40 | c.894 others(55): Show |
CIP2A | ENSG00000163507.15 | transcript | ENST00000295746.13 | protein_coding | 8/20 | chr3 | TogoVar | ||||||
CLCN3_chr4_169615578_169728673 | 169679863 | AGGGAGAC others(33): Show |
A | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00558.hp1 others(58): Show |
a0001 | a0001c0002a0001c0004 | a0001c0002t0002a0001c0002t0008a0001c0002t0009others(5): Show | a0001c0002t0002g0004a0001c0002t0002g0032a0001c0002t0002g0052others(56): Show | 61 | 288 | 0.2118 | -40 | c.161 others(55): Show |
CLCN3 | ENSG00000109572.16 | transcript | ENST00000513761.6 | protein_coding | 2/12 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
CLEC2L_chr7_139518685_139549985 | 139520442 | CCTAGATG others(33): Show |
C | upstream_gene_variant | MODIFIER | HG02723.hp2 | a0001 | a0001c0007 | a0001c0007t0003 | a0001c0007t0003g0110 | 1 | 308 | 0.0033 | -40 | c.-34 others(51): Show |
CLEC2L | ENSG00000236279.7 | transcript | ENST00000422142.7 | protein_coding | 3242 | chr7 | TogoVar | ||||||
CLIC5_chr6_45893456_46020860 | 46006093 | CATATATA others(33): Show |
C | intron_variant | MODIFIER | HG01081.hp1 HG02257.hp1 HG02451.hp1 others(7): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(2): Show | a0001c0001t0001g0014a0001c0001t0001g0015a0001c0001t0001g0016others(7): Show | 10 | 340 | 0.0294 | -40 | c.63+ others(55): Show |
CLIC5 | ENSG00000112782.19 | transcript | ENST00000339561.12 | protein_coding | 1/5 | chr6 | TogoVar | ||||||
CLMP_chr11_123064872_123200248 | 123118929 | TTTTCTTT others(33): Show |
T | intron_variant | MODIFIER | HG01167.hp2 HG01168.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0052a0001c0001t0002g0214 | 2 | 254 | 0.0079 | -40 | c.29- others(57): Show |
CLMP | ENSG00000166250.12 | transcript | ENST00000448775.4 | protein_coding | 1/6 | chr11 | TogoVar | ||||||
CLMP_chr11_123064872_123200248 | 123118983 | TTCTTTCT others(33): Show |
T | intron_variant | MODIFIER | HG02818.hp2 | a0001 | a0001c0001 | a0001c0001t0043 | a0001c0001t0043g0187 | 1 | 254 | 0.0039 | -40 | c.29- others(57): Show |
CLMP | ENSG00000166250.12 | transcript | ENST00000448775.4 | protein_coding | 1/6 | chr11 | TogoVar | ||||||
CLPB_chr11_72280495_72439531 | 72297636 | GGTGTGTG others(33): Show |
G | intron_variant | MODIFIER | NA19066.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0072 | 1 | 206 | 0.0049 | -40 | c.142 others(59): Show |
CLPB | ENSG00000162129.15 | transcript | ENST00000294053.9 | protein_coding | 12/16 | chr11 | TogoVar | ||||||
CLPS_chr6_35789982_35802323 | 35796165 | ACACAAGG others(33): Show |
A | intron_variant | MODIFIER | HG04115.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0028 | 1 | 418 | 0.0024 | -40 | c.85- others(53): Show |
CLPS | ENSG00000137392.10 | transcript | ENST00000259938.7 | protein_coding | 1/2 | chr6 | TogoVar | ||||||
CLSTN2_chr3_139930185_140582397 | 140135097 | CACACACA others(33): Show |
C | intron_variant | MODIFIER | HG02559.hp1 HG03098.hp2 HG03209.hp2 |
a0001a0002 | a0001c0001a0001c0009a0002c0017 | a0001c0001t0002a0001c0009t0022a0002c0017t0005 | a0001c0001t0002g0091a0001c0009t0022g0049a0002c0017t0005g0027 | 3 | 110 | 0.0273 | -40 | c.110 others(59): Show |
CLSTN2 | ENSG00000158258.16 | transcript | ENST00000458420.7 | protein_coding | 1/16 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
CMIP_chr16_81439808_81716762 | 81551150 | CACCCCAG others(33): Show |
C | intron_variant | MODIFIER | HG02647.hp2 HG02895.hp1 HG02897.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0261a0001c0001t0001g0262a0001c0001t0001g0263 | 3 | 268 | 0.0112 | -40 | c.301 others(59): Show |
CMIP | ENSG00000153815.18 | transcript | ENST00000537098.8 | protein_coding | 1/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |||||
CMKLR2_chr2_206170316_206218371 | 206172035 | ATGGGATG others(33): Show |
A | downstream_gene_variant | MODIFIER | HG03139.hp1 HG03195.hp1 HG03516.hp1 |
a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0132a0001c0001t0005g0311a0001c0001t0005g0312 | 3 | 322 | 0.0093 | -40 | c.*41 others(51): Show |
CMKLR2 | ENSG00000183671.13 | transcript | ENST00000621141.5 | protein_coding | 3280 | chr2 | TogoVar | ||||||
CMSS1_chr3_99812862_100186732 | 99983446 | GTATATAT others(33): Show |
G | intron_variant | MODIFIER | HG03195.hp2 | a0001 | a0001c0001 | a0001c0001t0021 | a0001c0001t0021g0018 | 1 | 232 | 0.0043 | -40 | c.65- others(59): Show |
CMSS1 | ENSG00000184220.12 | transcript | ENST00000421999.8 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
CMSS1_chr3_99812862_100186732 | 100115551 | TTCTCTTT others(33): Show |
T | intron_variant | MODIFIER | HG03471.hp1 | a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0082 | 1 | 232 | 0.0043 | -40 | c.65- others(57): Show |
CMSS1 | ENSG00000184220.12 | transcript | ENST00000421999.8 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
CMSS1_chr3_99812862_100186732 | 100115557 | TTCTCTCT others(33): Show |
T | intron_variant | MODIFIER | HG00280.hp1 HG00423.hp2 HG02015.hp2 others(25): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(1): Show | a0001c0001t0001g0102a0001c0001t0002g0013a0001c0001t0002g0073others(25): Show | 28 | 232 | 0.1207 | -40 | c.65- others(57): Show |
CMSS1 | ENSG00000184220.12 | transcript | ENST00000421999.8 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
CNBD2_chr20_35963590_36035700 | 36001573 | GGGCGGAG others(33): Show |
G | intron_variant | MODIFIER | HG03471.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0119 | 1 | 268 | 0.0037 | -40 | c.970 others(57): Show |
CNBD2 | ENSG00000149646.12 | transcript | ENST00000373973.7 | protein_coding | 8/11 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
CNBP_chr3_129162827_129188896 | 129172584 | GCAGGCAG others(33): Show |
G | intron_variant | MODIFIER | HG02258.hp2 HG02280.hp2 HG02559.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004a0001c0001t0029 | a0001c0001t0001g0306a0001c0001t0004g0025a0001c0001t0029g0300 | 4 | 430 | 0.0093 | -40 | c.-14 others(55): Show |
CNBP | ENSG00000169714.17 | transcript | ENST00000422453.7 | protein_coding | 1/4 | chr3 | TogoVar | ||||||
CNN2_chr19_1021608_1044065 | 1029023 | TCCCAAAT others(33): Show |
T | intron_variant | MODIFIER | HG02155.hp1 | a0001 | a0001c0018 | a0001c0018t0008 | a0001c0018t0008g0193 | 1 | 390 | 0.0026 | -40 | c.64- others(55): Show |
CNN2 | ENSG00000064666.15 | transcript | ENST00000263097.9 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | |||||
CNOT4_chr7_135356795_135515102 | 135495686 | AAAAAAAA others(33): Show |
A | intron_variant | MODIFIER | HG02818.hp1 HG02896.hp1 HG02970.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0131a0001c0001t0002g0132a0001c0001t0002g0133others(1): Show | 4 | 362 | 0.0111 | -40 | c.-93 others(59): Show |
CNOT4 | ENSG00000080802.21 | transcript | ENST00000541284.6 | protein_coding | 1/11 | chr7 | TogoVar | ||||||
CNOT6_chr5_180489379_180583358 | 180539551 | CTTTTTTT others(33): Show |
C | intron_variant | MODIFIER | HG01891.hp2 HG02486.hp1 HG02572.hp2 others(6): Show |
a0001 | a0001c0002 | a0001c0002t0005 | a0001c0002t0005g0021a0001c0002t0005g0022a0001c0002t0005g0023others(6): Show | 9 | 334 | 0.0270 | -40 | c.112 others(59): Show |
CNOT6 | ENSG00000113300.13 | transcript | ENST00000261951.9 | protein_coding | 2/11 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
CNPY1_chr7_155496129_155551559 | 155534309 | ACACACAC others(33): Show |
A | intron_variant | MODIFIER | HG03017.hp2 | a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0250 | 1 | 426 | 0.0024 | -40 | c.99+ others(57): Show |
CNPY1 | ENSG00000146910.14 | transcript | ENST00000636446.2 | protein_coding | 2/4 | chr7 | TogoVar | ||||||
CNST_chr1_246561456_246673595 | 246605709 | GGTGTCTT others(33): Show |
G | intron_variant | MODIFIER | NA21309.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0166 | 1 | 320 | 0.0031 | -40 | c.379 others(59): Show |
CNST | ENSG00000162852.14 | transcript | ENST00000366513.9 | protein_coding | 2/10 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
CNTN1_chr12_40687439_41077415 | 41056979 | AGATATTT others(33): Show |
A | intron_variant | MODIFIER | HG01167.hp1 HG02109.hp1 HG02572.hp1 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0014 | a0001c0001t0001g0063a0001c0001t0001g0095a0001c0001t0001g0212others(4): Show | 7 | 230 | 0.0304 | -40 | c.298 others(61): Show |
CNTN1 | ENSG00000018236.15 | transcript | ENST00000551295.7 | protein_coding | 23/23 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
CNTN5_chr11_99015949_100363885 | 99598258 | CCTTTTCT others(33): Show |
C | intron_variant | MODIFIER | HG00738.hp1 HG01099.hp2 HG01243.hp1 others(9): Show |
a0001a0002a0003others(3): Show | a0001c0001a0002c0002a0003c0003others(3): Show | a0001c0001t0003a0002c0002t0001a0002c0002t0003others(7): Show | a0001c0001t0003g0021a0001c0001t0003g0022a0002c0002t0001g0003others(9): Show | 12 | 66 | 0.1818 | -40 | c.55+ others(57): Show |
CNTN5 | ENSG00000149972.12 | transcript | ENST00000524871.6 | protein_coding | 3/24 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | |||||
CNTN6_chr3_1088024_1409217 | 1158833 | CACACACA others(33): Show |
C | intron_variant | MODIFIER | HG01884.hp2 HG02109.hp1 HG02145.hp1 others(19): Show |
a0001a0002a0004others(1): Show | a0001c0001a0001c0002a0001c0005others(9): Show | a0001c0001t0001a0001c0002t0001a0001c0002t0004others(13): Show | a0001c0001t0001g0190a0001c0002t0001g0227a0001c0002t0004g0228others(19): Show | 22 | 232 | 0.0948 | -40 | c.55+ others(57): Show |
CNTN6 | ENSG00000134115.13 | transcript | ENST00000446702.7 | protein_coding | 2/22 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
CNTNAP2_chr7_146111801_148425998 | 147775309 | AAATATAT others(33): Show |
A | intron_variant | MODIFIER | HG00735.hp2 | a0001 | a0001c0019 | a0001c0019t0006 | a0001c0019t0006g0015 | 1 | 40 | 0.0250 | -40 | c.209 others(63): Show |
CNTNAP2 | ENSG00000174469.23 | transcript | ENST00000361727.8 | protein_coding | 13/23 | chr7 | TogoVar | ||||||
COBL_chr7_51011212_51321809 | 51207955 | GCCTGGCC others(33): Show |
G | intron_variant | MODIFIER | HG00099.hp1 HG01261.hp2 HG01433.hp2 others(3): Show |
a0002a0003a0004others(1): Show | a0002c0003a0003c0001a0004c0025others(1): Show | a0002c0003t0001a0003c0001t0001a0004c0025t0002others(1): Show | a0002c0003t0001g0067a0003c0001t0001g0009a0003c0001t0001g0025others(3): Show | 6 | 230 | 0.0261 | -40 | c.245 others(59): Show |
COBL | ENSG00000106078.19 | transcript | ENST00000265136.12 | protein_coding | 2/12 | chr7 | TogoVar | ||||||
COG1_chr17_73188055_73213507 | 73192830 | CCGCGCCC others(33): Show |
C | upstream_gene_variant | MODIFIER | HG02451.hp1 HG02723.hp1 HG02818.hp2 others(6): Show |
a0002 | a0002c0001a0002c0006 | a0002c0001t0001a0002c0006t0001 | a0002c0001t0001g0006a0002c0001t0001g0032a0002c0001t0001g0044others(6): Show | 9 | 428 | 0.0210 | -40 | c.-23 others(49): Show |
COG1 | ENSG00000166685.13 | transcript | ENST00000299886.9 | protein_coding | 224 | chr17 | TogoVar | ||||||
COG3_chr13_45459939_45541701 | 45485729 | ACGCTCCT others(33): Show |
A | intron_variant | MODIFIER | HG03139.hp1 NA18522.hp2 |
a0002 | a0002c0005 | a0002c0005t0011a0002c0005t0012 | a0002c0005t0011g0150a0002c0005t0012g0148 | 2 | 342 | 0.0059 | -40 | c.844 others(55): Show |
COG3 | ENSG00000136152.15 | transcript | ENST00000349995.10 | protein_coding | 7/22 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
COL11A1_chr1_102871473_103113522 | 103043034 | TAAATACA others(33): Show |
T | intron_variant | MODIFIER | HG01071.hp1 HG01099.hp2 HG01243.hp1 others(24): Show |
a0001a0002a0008others(1): Show | a0001c0002a0002c0001a0002c0033others(2): Show | a0001c0002t0002a0001c0002t0003a0002c0001t0001others(4): Show | a0001c0002t0002g0155a0001c0002t0003g0019a0001c0002t0003g0020others(24): Show | 27 | 184 | 0.1467 | -40 | c.652 others(59): Show |
COL11A1 | ENSG00000060718.22 | transcript | ENST00000370096.9 | protein_coding | 4/66 | chr1 | TogoVar | ||||||
COL13A1_chr10_69796906_69964144 | 69936088 | GGAAGGAG others(33): Show |
G | intron_variant | MODIFIER | HG03195.hp1 | a0002 | a0002c0024 | a0002c0024t0003 | a0002c0024t0003g0264 | 1 | 324 | 0.0031 | -40 | c.177 others(57): Show |
COL13A1 | ENSG00000197467.17 | transcript | ENST00000645393.2 | protein_coding | 32/40 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |||||
COL18A1_chr21_45400165_45518720 | 45437820 | ACTCACAC others(33): Show |
A | intron_variant | MODIFIER | HG02257.hp1 | a0027 | a0027c0070 | a0027c0070t0001 | a0027c0070t0001g0012 | 1 | 292 | 0.0034 | -40 | c.107 others(59): Show |
COL18A1 | ENSG00000182871.16 | transcript | ENST00000651438.1 | protein_coding | 2/41 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | |||||
COL18A1_chr21_45400165_45518720 | 45437966 | ACACACAC others(33): Show |
A | intron_variant | MODIFIER | HG00099.hp2 HG00438.hp2 HG00597.hp1 others(26): Show |
a0001a0006a0007others(2): Show | a0001c0003a0001c0004a0001c0005others(8): Show | a0001c0003t0001a0001c0003t0003a0001c0003t0008others(11): Show | a0001c0003t0001g0043a0001c0003t0001g0081a0001c0003t0001g0085others(26): Show | 29 | 292 | 0.0993 | -40 | c.107 others(59): Show |
COL18A1 | ENSG00000182871.16 | transcript | ENST00000651438.1 | protein_coding | 2/41 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | |||||
COL20A1_chr20_63288186_63339806 | 63303859 | CCAGGTGT others(33): Show |
C | intron_variant | MODIFIER | HG02055.hp1 HG02723.hp2 |
a0001a0003 | a0001c0014a0003c0043 | a0001c0014t0003a0003c0043t0007 | a0001c0014t0003g0136a0003c0043t0007g0137 | 2 | 290 | 0.0069 | -40 | c.194 others(57): Show |
COL20A1 | ENSG00000101203.17 | transcript | ENST00000358894.11 | protein_coding | 3/35 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
COL21A1_chr6_56051590_56252580 | 56121472 | ATATATAT others(33): Show |
A | intron_variant | MODIFIER | HG00099.hp1 HG00735.hp2 HG01071.hp1 others(15): Show |
a0001a0003a0006others(1): Show | a0001c0001a0001c0002a0001c0014others(5): Show | a0001c0001t0014a0001c0002t0002a0001c0014t0010others(6): Show | a0001c0001t0014g0087a0001c0002t0002g0197a0001c0014t0010g0010others(15): Show | 18 | 264 | 0.0682 | -40 | c.175 others(59): Show |
COL21A1 | ENSG00000124749.18 | transcript | ENST00000244728.10 | protein_coding | 16/29 | chr6 | TogoVar | ||||||
COL22A1_chr8_138583235_138919041 | 138660845 | CACACACA others(33): Show |
C | intron_variant | MODIFIER | HG02559.hp1 HG02809.hp2 |
a0001 | a0001c0010a0001c0016 | a0001c0010t0001a0001c0016t0001 | a0001c0010t0001g0128a0001c0016t0001g0132 | 2 | 158 | 0.0127 | -40 | c.324 others(57): Show |
COL22A1 | ENSG00000169436.18 | transcript | ENST00000303045.11 | protein_coding | 43/64 | chr8 | TogoVar | ||||||
COL23A1_chr5_178232618_178595393 | 178269336 | CATCCATC others(33): Show |
C | intron_variant | MODIFIER | HG00280.hp2 HG00738.hp1 HG00738.hp2 others(62): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0004a0002c0002others(7): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(19): Show | a0001c0001t0002g0028a0001c0001t0002g0056a0001c0001t0002g0083others(62): Show | 65 | 236 | 0.2754 | -40 | c.469 others(55): Show |
COL23A1 | ENSG00000050767.18 | transcript | ENST00000390654.8 | protein_coding | 6/28 | chr5 | TogoVar | ||||||
COL23A1_chr5_178232618_178595393 | 178349497 | CCCATCCC others(33): Show |
C | intron_variant | MODIFIER | HG00280.hp1 HG00280.hp2 HG00408.hp1 others(166): Show |
a0001a0002a0003others(8): Show | a0001c0001a0001c0004a0002c0002others(16): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(38): Show | a0001c0001t0001g0002a0001c0001t0001g0076a0001c0001t0001g0199others(166): Show | 169 | 236 | 0.7161 | -40 | c.362 others(59): Show |
COL23A1 | ENSG00000050767.18 | transcript | ENST00000390654.8 | protein_coding | 2/28 | chr5 | TogoVar | ||||||
COL23A1_chr5_178232618_178595393 | 178518633 | AGAGACGC others(33): Show |
A | intron_variant | MODIFIER | HG01106.hp2 HG01243.hp1 HG01243.hp2 others(21): Show |
a0001a0002a0003others(2): Show | a0001c0001a0002c0002a0002c0003others(3): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(13): Show | a0001c0001t0002g0083a0001c0001t0003g0067a0001c0001t0003g0073others(21): Show | 24 | 236 | 0.1017 | -40 | c.361 others(59): Show |
COL23A1 | ENSG00000050767.18 | transcript | ENST00000390654.8 | protein_coding | 2/28 | chr5 | TogoVar | ||||||
COL23A1_chr5_178232618_178595393 | 178547610 | CCCCCCAC others(33): Show |
C | intron_variant | MODIFIER | HG02895.hp2 HG03130.hp2 HG03471.hp1 |
a0001a0004 | a0001c0001a0004c0006 | a0001c0001t0003a0001c0001t0005a0004c0006t0003 | a0001c0001t0003g0182a0001c0001t0005g0113a0004c0006t0003g0128 | 3 | 236 | 0.0127 | -40 | c.361 others(59): Show |
COL23A1 | ENSG00000050767.18 | transcript | ENST00000390654.8 | protein_coding | 2/28 | chr5 | TogoVar | ||||||
COL26A1_chr7_101357875_101564024 | 101489659 | TTCTTCCT others(33): Show |
T | intron_variant | MODIFIER | HG00140.hp2 | a0002 | a0002c0004 | a0002c0004t0001 | a0002c0004t0001g0097 | 1 | 174 | 0.0058 | -40 | c.385 others(59): Show |
COL26A1 | ENSG00000160963.14 | transcript | ENST00000313669.12 | protein_coding | 3/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
COL4A4_chr2_226997714_227169205 | 227041759 | GAAGGAAG others(33): Show |
G | intron_variant | MODIFIER | NA18945.hp1 | a0002 | a0002c0002 | a0002c0002t0005 | a0002c0002t0005g0215 | 1 | 284 | 0.0035 | -40 | c.350 others(57): Show |
COL4A4 | ENSG00000081052.14 | transcript | ENST00000396625.5 | protein_coding | 37/47 | chr2 | TogoVar | ||||||
COL4A4_chr2_226997714_227169205 | 227041771 | GAAGGAAG others(33): Show |
G | intron_variant | MODIFIER | NA19065.hp1 | a0002 | a0002c0002 | a0002c0002t0002 | a0002c0002t0002g0079 | 1 | 284 | 0.0035 | -40 | c.350 others(57): Show |
COL4A4 | ENSG00000081052.14 | transcript | ENST00000396625.5 | protein_coding | 37/47 | chr2 | TogoVar | ||||||
COL4A4_chr2_226997714_227169205 | 227041775 | GAAGGAAG others(33): Show |
G | intron_variant | MODIFIER | HG02129.hp1 | a0002 | a0002c0002 | a0002c0002t0002 | a0002c0002t0002g0051 | 1 | 284 | 0.0035 | -40 | c.350 others(57): Show |
COL4A4 | ENSG00000081052.14 | transcript | ENST00000396625.5 | protein_coding | 37/47 | chr2 | TogoVar | ||||||
COL5A1_chr9_134636803_134849843 | 134636860 | CCACTGGC others(33): Show |
C | upstream_gene_variant | MODIFIER | HG01975.hp1 | a0001 | a0001c0008 | a0001c0008t0001 | a0001c0008t0001g0114 | 1 | 272 | 0.0037 | -40 | c.-53 others(51): Show |
COL5A1 | ENSG00000130635.17 | transcript | ENST00000371817.8 | protein_coding | 4942 | chr9 | TogoVar | ||||||
COL5A1_chr9_134636803_134849843 | 134669212 | TTTCCCTT others(33): Show |
T | intron_variant | MODIFIER | HG00438.hp2 HG03139.hp1 HG03516.hp1 others(3): Show |
a0001a0005a0012 | a0001c0001a0001c0003a0001c0057others(2): Show | a0001c0001t0002a0001c0003t0004a0001c0003t0014others(3): Show | a0001c0001t0002g0023a0001c0003t0004g0038a0001c0003t0014g0247others(3): Show | 6 | 272 | 0.0221 | -40 | c.110 others(59): Show |
COL5A1 | ENSG00000130635.17 | transcript | ENST00000371817.8 | protein_coding | 1/65 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | |||||
COL5A1_chr9_134636803_134849843 | 134792865 | GCGCGCGT others(33): Show |
G | intron_variant | MODIFIER | HG02451.hp1 HG02486.hp2 HG02647.hp2 others(1): Show |
a0001 | a0001c0005a0001c0007 | a0001c0005t0003a0001c0005t0006a0001c0005t0014others(1): Show | a0001c0005t0003g0265a0001c0005t0006g0040a0001c0005t0014g0258others(1): Show | 4 | 272 | 0.0147 | -40 | c.270 others(59): Show |
COL5A1 | ENSG00000130635.17 | transcript | ENST00000371817.8 | protein_coding | 32/65 | INFO_REALIGN_3_PRIME | chr9 | TogoVar |