view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
LLGL2_chr17_75520697_75580209 | 75558864 | CCGCCTCC others(33): Show |
C | intron_variant | MODIFIER | HG00408.hp2 HG00639.hp1 HG01099.hp2 others(14): Show |
a0002a0004a0008others(2): Show | a0002c0003a0002c0004a0002c0006others(4): Show | a0002c0003t0005a0002c0004t0003a0002c0006t0003others(4): Show | a0002c0003t0005g0095 a0002c0004t0003g0070 a0002c0004t0003g0358 others(13): Show |
17 | 337 | 0.0504 | -40 | c.371 others(55): Show |
LLGL2 | ENSG00000073350.14 | transcript | ENST00000392550.8 | protein_coding | 5/25 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
LLPH_chr12_66111555_66135750 | 66134658 | GTGAGAAG others(33): Show |
G | upstream_gene_variant | MODIFIER | HG01884.hp1 HG02572.hp2 HG03209.hp1 |
a0001 | a0001c0001 | a0001c0001t0007a0001c0001t0018 | a0001c0001t0007g0007 a0001c0001t0018g0017 |
3 | 362 | 0.0083 | -40 | c.-40 others(51): Show |
LLPH | ENSG00000139233.7 | transcript | ENST00000266604.7 | protein_coding | 3909 | chr12 | TogoVar | |||||||
LMAN2_chr5_177326567_177356668 | 177326841 | GAAAGAAA others(33): Show |
G | downstream_gene_variant | MODIFIER | HG01109.hp2 HG03225.hp1 HG03225.hp2 others(1): Show |
a0001 | a0001c0001a0001c0007 | a0001c0001t0001a0001c0001t0002a0001c0007t0001 | a0001c0001t0001g0033 a0001c0001t0002g0039 a0001c0001t0002g0229 others(1): Show |
4 | 357 | 0.0112 | -40 | c.*52 others(51): Show |
LMAN2 | ENSG00000169223.16 | transcript | ENST00000303127.12 | protein_coding | 4725 | chr5 | TogoVar | |||||||
LMAN2_chr5_177326567_177356668 | 177326845 | GAAAGAAA others(33): Show |
G | downstream_gene_variant | MODIFIER | HG02145.hp1 HG02258.hp1 HG02602.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0005 a0001c0001t0001g0034 a0001c0001t0001g0036 others(3): Show |
6 | 321 | 0.0187 | -40 | c.*52 others(51): Show |
LMAN2 | ENSG00000169223.16 | transcript | ENST00000303127.12 | protein_coding | 4721 | chr5 | TogoVar | |||||||
LMAN2_chr5_177326567_177356668 | 177326853 | GAAAGAAA others(33): Show |
G | downstream_gene_variant | MODIFIER | HG03540.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0164 | 1 | 369 | 0.0027 | -40 | c.*51 others(51): Show |
LMAN2 | ENSG00000169223.16 | transcript | ENST00000303127.12 | protein_coding | 4713 | chr5 | TogoVar | |||||||
LMAN2_chr5_177326567_177356668 | 177326857 | GAAAGAAA others(33): Show |
G | downstream_gene_variant | MODIFIER | NA18906.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0209 | 1 | 359 | 0.0028 | -40 | c.*51 others(51): Show |
LMAN2 | ENSG00000169223.16 | transcript | ENST00000303127.12 | protein_coding | 4709 | chr5 | TogoVar | |||||||
LMBRD1_chr6_69669010_69802010 | 69749843 | TATATACA others(33): Show |
T | intron_variant | MODIFIER | HG00408.hp1 HG00621.hp2 HG00673.hp2 others(18): Show |
a0001a0004 | a0001c0001a0001c0004a0004c0005 | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(4): Show | a0001c0001t0001g0201 a0001c0001t0003g0173 a0001c0001t0003g0175 others(18): Show |
21 | 284 | 0.0739 | -40 | c.406 others(55): Show |
LMBRD1 | ENSG00000168216.13 | transcript | ENST00000649934.3 | protein_coding | 4/15 | chr6 | TogoVar | |||||||
LMNB2_chr19_2423166_2461959 | 2452933 | CTGCGTCA others(33): Show |
C | intron_variant | MODIFIER | HG00323.hp1 HG00642.hp1 HG00738.hp1 others(36): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(3): Show | a0001c0001t0001g0250 a0001c0001t0002g0193 a0001c0001t0003g0011 others(30): Show |
39 | 354 | 0.1102 | -40 | c.264 others(57): Show |
LMNB2 | ENSG00000176619.13 | transcript | ENST00000325327.4 | protein_coding | 1/11 | chr19 | TogoVar | |||||||
LMOD1_chr1_201891456_201951548 | 201901545 | TATATATA others(33): Show |
T | intron_variant | MODIFIER | HG02559.hp1 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0385 | 1 | 396 | 0.0025 | -40 | c.262 others(55): Show |
LMOD1 | ENSG00000163431.14 | transcript | ENST00000367288.5 | protein_coding | 1/2 | chr1 | TogoVar | |||||||
LMOD1_chr1_201891456_201951548 | 201901582 | ATACATAT others(33): Show |
A | intron_variant | MODIFIER | HG01891.hp1 HG02630.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0010 a0001c0001t0001g0294 |
2 | 398 | 0.0050 | -40 | c.262 others(55): Show |
LMOD1 | ENSG00000163431.14 | transcript | ENST00000367288.5 | protein_coding | 1/2 | chr1 | TogoVar | |||||||
LMTK2_chr7_98101862_98214638 | 98122692 | GTGTGTGT others(33): Show |
G | intron_variant | MODIFIER | NA18986.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0257 | 1 | 388 | 0.0026 | -40 | c.104 others(59): Show |
LMTK2 | ENSG00000164715.6 | transcript | ENST00000297293.6 | protein_coding | 1/13 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
LMTK3_chr19_48480271_48516835 | 48499992 | ACCAGAGA others(33): Show |
A | intron_variant | MODIFIER | HG02818.hp1 HG03579.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0040 a0001c0001t0001g0041 |
2 | 312 | 0.0064 | -40 | c.115 others(56): Show |
LMTK3 | ENSG00000142235.13 | transcript | ENST00000600059.6 | protein_coding | 10/14 | chr19 | TogoVar | |||||||
LNX1_chr4_53454301_53596486 | 53587020 | GCAAACAT others(33): Show |
G | intron_variant | MODIFIER | HG02523.hp2 | a0003 | a0003c0003 | a0003c0003t0001 | a0003c0003t0001g0284 | 1 | 354 | 0.0028 | -40 | c.-87 others(57): Show |
LNX1 | ENSG00000072201.14 | transcript | ENST00000263925.8 | protein_coding | 1/10 | chr4 | TogoVar | |||||||
LOC128092249_chr21_46321288_46331491 | 46328282 | TAAGATAC others(33): Show |
T | downstream_gene_variant | MODIFIER | HG02897.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0000 | 1 | 418 | 0.0024 | -40 | c.*17 others(51): Show |
LOC128092249 | ENSG00000286224.1 | transcript | ENST00000652508.1 | protein_coding | 1792 | chr21 | TogoVar | |||||||
LOC128462377_chr16_89312046_89423292 | 89323404 | CAGGGCAG others(33): Show |
C | intron_variant | MODIFIER | HG03041.hp1 HG03453.hp2 NA20129.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0022 |
3 | 358 | 0.0084 | -40 | c.10- others(55): Show |
LOC128462377 | ENSG00000288715.2 | transcript | ENST00000711617.1 | protein_coding | 1/1 | chr16 | TogoVar | |||||||
LOC400499_chr16_11367015_11532247 | 11493824 | AGGGGCAG others(33): Show |
A | intron_variant | MODIFIER | HG02027.hp2 HG02129.hp2 HG03834.hp2 others(7): Show |
a0001a0003a0005others(7): Show | a0001c0003a0003c0002a0005c0271others(7): Show | a0001c0003t0001a0003c0002t0001a0005c0271t0003others(7): Show | a0001c0003t0001g0244 a0003c0002t0001g0136 a0005c0271t0003g0267 others(7): Show |
10 | 269 | 0.0372 | -40 | c.143 others(55): Show |
LOC400499 | ENSG00000188897.10 | transcript | ENST00000696174.1 | protein_coding | 11/66 | chr16 | TogoVar | |||||||
LOC400499_chr16_11367015_11532247 | 11515845 | GGCCCGGC others(33): Show |
G | intron_variant | MODIFIER | HG00639.hp1 | a0048 | a0048c0238 | a0048c0238t0005 | a0048c0238t0005g0069 | 1 | 173 | 0.0058 | -40 | c.654 others(53): Show |
LOC400499 | ENSG00000188897.10 | transcript | ENST00000696174.1 | protein_coding | 6/66 | chr16 | TogoVar | |||||||
LPAR1_chr9_110868263_111043470 | 110892810 | AAGGAAGG others(33): Show |
A | intron_variant | MODIFIER | HG02273.hp1 | a0001 | a0001c0002 | a0001c0002t0003 | a0001c0002t0003g0232 | 1 | 296 | 0.0034 | -40 | c.794 others(59): Show |
LPAR1 | ENSG00000198121.15 | transcript | ENST00000683809.1 | protein_coding | 5/5 | chr9 | TogoVar | |||||||
LPAR1_chr9_110868263_111043470 | 110892814 | AAGGAAGG others(33): Show |
A | intron_variant | MODIFIER | HG00438.hp2 HG00558.hp1 HG00597.hp1 others(27): Show |
a0001a0002a0004 | a0001c0001a0001c0002a0002c0004others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(4): Show | a0001c0001t0001g0041 a0001c0001t0001g0084 a0001c0001t0001g0095 others(27): Show |
30 | 297 | 0.1010 | -40 | c.794 others(59): Show |
LPAR1 | ENSG00000198121.15 | transcript | ENST00000683809.1 | protein_coding | 5/5 | chr9 | TogoVar | |||||||
LPA_chr6_160526482_160669275 | 160576332 | GTGTGTGT others(33): Show |
G | intron_variant | MODIFIER | NA20752.hp2 | a0034 | a0034c0038 | a0034c0038t0001 | a0034c0038t0001g0120 | 1 | 136 | 0.0074 | -40 | c.463 others(57): Show |
LPA | ENSG00000198670.13 | transcript | ENST00000316300.10 | protein_coding | 28/38 | chr6 | TogoVar | |||||||
LPA_chr6_160526482_160669275 | 160576334 | GTGTGTGT others(33): Show |
G | intron_variant | MODIFIER | HG02145.hp2 HG02451.hp2 HG02572.hp2 others(8): Show |
a0002a0006a0024others(1): Show | a0002c0002a0006c0005a0024c0026others(1): Show | a0002c0002t0002a0006c0005t0002a0024c0026t0002others(1): Show | a0002c0002t0002g0001 a0002c0002t0002g0003 a0002c0002t0002g0005 others(8): Show |
11 | 115 | 0.0957 | -40 | c.463 others(57): Show |
LPA | ENSG00000198670.13 | transcript | ENST00000316300.10 | protein_coding | 28/38 | chr6 | TogoVar | |||||||
LPCAT1_chr5_1456427_1528960 | 1458820 | GTGTAAGC others(33): Show |
G | downstream_gene_variant | MODIFIER | NA18906.hp2 | a0001 | a0001c0010 | a0001c0010t0001 | a0001c0010t0001g0264 | 1 | 384 | 0.0026 | -40 | c.*47 others(51): Show |
LPCAT1 | ENSG00000153395.10 | transcript | ENST00000283415.4 | protein_coding | 2606 | chr5 | TogoVar | |||||||
LPCAT1_chr5_1456427_1528960 | 1476804 | TGGGGAGG others(33): Show |
T | intron_variant | MODIFIER | HG02257.hp1 HG02559.hp2 HG02572.hp2 others(2): Show |
a0001a0004 | a0001c0001a0004c0014 | a0001c0001t0004a0004c0014t0034 | a0001c0001t0004g0013 a0001c0001t0004g0347 a0001c0001t0004g0363 others(1): Show |
5 | 384 | 0.0130 | -40 | c.899 others(55): Show |
LPCAT1 | ENSG00000153395.10 | transcript | ENST00000283415.4 | protein_coding | 9/13 | chr5 | TogoVar | |||||||
LPP_chr3_188149157_188895671 | 188607370 | GATATATA others(33): Show |
G | intron_variant | MODIFIER | HG00438.hp1 HG00673.hp1 HG01361.hp2 others(5): Show |
a0001a0004 | a0001c0001a0001c0002a0001c0005others(2): Show | a0001c0001t0026a0001c0001t0054a0001c0002t0001others(5): Show | a0001c0001t0026g0060 a0001c0001t0054g0012 a0001c0002t0001g0042 others(5): Show |
8 | 33 | 0.2424 | -40 | c.430 others(57): Show |
LPP | ENSG00000145012.15 | transcript | ENST00000617246.5 | protein_coding | 6/11 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
LRBA_chr4_150259435_151020284 | 150639779 | ATATGTGT others(33): Show |
A | intron_variant | MODIFIER | HG03831.hp1 NA18952.hp2 NA18962.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0100 a0001c0001t0001g0110 a0001c0001t0002g0032 |
3 | 175 | 0.0171 | -40 | c.592 others(61): Show |
LRBA | ENSG00000198589.15 | transcript | ENST00000651943.2 | protein_coding | 37/56 | chr4 | TogoVar | |||||||
LRBA_chr4_150259435_151020284 | 150639791 | GTATATAT others(33): Show |
G | intron_variant | MODIFIER | HG00621.hp1 NA19068.hp2 |
a0004 | a0004c0006 | a0004c0006t0001 | a0004c0006t0001g0145 a0004c0006t0001g0149 |
2 | 152 | 0.0132 | -40 | c.592 others(61): Show |
LRBA | ENSG00000198589.15 | transcript | ENST00000651943.2 | protein_coding | 37/56 | chr4 | TogoVar | |||||||
LRBA_chr4_150259435_151020284 | 150659446 | GCCCCGTC others(33): Show |
G | intron_variant | MODIFIER | HG00735.hp1 | a0003 | a0003c0042 | a0003c0042t0001 | a0003c0042t0001g0180 | 1 | 177 | 0.0056 | -40 | c.592 others(61): Show |
LRBA | ENSG00000198589.15 | transcript | ENST00000651943.2 | protein_coding | 37/56 | chr4 | TogoVar | |||||||
LRBA_chr4_150259435_151020284 | 150659486 | ACCCCGTC others(33): Show |
A | intron_variant | MODIFIER | HG03654.hp1 | a0002 | a0002c0040 | a0002c0040t0002 | a0002c0040t0002g0129 | 1 | 178 | 0.0056 | -40 | c.592 others(61): Show |
LRBA | ENSG00000198589.15 | transcript | ENST00000651943.2 | protein_coding | 37/56 | chr4 | TogoVar | |||||||
LRCOL1_chr12_132598151_132615582 | 132598253 | GCTCCTCT others(33): Show |
G | downstream_gene_variant | MODIFIER | HG01358.hp1 HG02148.hp1 |
a0003 | a0003c0003 | a0003c0003t0003 | a0003c0003t0003g0012 | 2 | 214 | 0.0093 | -40 | c.*51 others(51): Show |
LRCOL1 | ENSG00000204583.10 | transcript | ENST00000376608.9 | protein_coding | 4897 | chr12 | TogoVar | |||||||
LRFN3_chr19_35931374_35951624 | 35951160 | TGAGGGAT others(33): Show |
T | downstream_gene_variant | MODIFIER | HG01934.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0047 | 1 | 416 | 0.0024 | -40 | c.*61 others(51): Show |
LRFN3 | ENSG00000126243.9 | transcript | ENST00000246529.4 | protein_coding | 4537 | chr19 | TogoVar | |||||||
LRFN5_chr14_41601876_41909549 | 41674806 | GGGGGCGG others(33): Show |
G | intron_variant | MODIFIER | NA21309.hp1 | a0001 | a0001c0002 | a0001c0002t0004 | a0001c0002t0004g0169 | 1 | 278 | 0.0036 | -40 | c.-19 others(61): Show |
LRFN5 | ENSG00000165379.14 | transcript | ENST00000298119.9 | protein_coding | 1/5 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
LRFN5_chr14_41601876_41909549 | 41781580 | GAAAGAAA others(33): Show |
G | intron_variant | MODIFIER | HG02572.hp1 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0168 | 1 | 278 | 0.0036 | -40 | c.-21 others(59): Show |
LRFN5 | ENSG00000165379.14 | transcript | ENST00000298119.9 | protein_coding | 2/5 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
LRFN5_chr14_41601876_41909549 | 41781584 | GAAAGAAA others(33): Show |
G | intron_variant | MODIFIER | NA18950.hp2 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0191 | 1 | 223 | 0.0045 | -40 | c.-21 others(59): Show |
LRFN5 | ENSG00000165379.14 | transcript | ENST00000298119.9 | protein_coding | 2/5 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
LRP1B_chr2_140226423_142136016 | 140345719 | TATATATA others(33): Show |
T | intron_variant | MODIFIER | HG01261.hp2 HG01884.hp2 HG02145.hp2 others(5): Show |
a0001a0005 | a0001c0002a0001c0008a0001c0011others(5): Show | a0001c0002t0010a0001c0008t0001a0001c0011t0001others(5): Show | a0001c0002t0010g0022 a0001c0008t0001g0008 a0001c0011t0001g0014 others(5): Show |
8 | 27 | 0.2963 | -40 | c.118 others(61): Show |
LRP1B | ENSG00000168702.18 | transcript | ENST00000389484.8 | protein_coding | 77/90 | chr2 | TogoVar | |||||||
LRP2_chr2_169122109_169367534 | 169299070 | GGAAAGAA others(33): Show |
G | intron_variant | MODIFIER | HG00099.hp2 HG00423.hp2 HG00558.hp1 others(26): Show |
a0001a0002a0003others(11): Show | a0001c0009a0001c0017a0001c0050others(20): Show | a0001c0009t0001a0001c0017t0001a0001c0050t0003others(23): Show | a0001c0009t0001g0214 a0001c0017t0001g0066 a0001c0017t0001g0067 others(25): Show |
29 | 162 | 0.1790 | -40 | c.428 others(57): Show |
LRP2 | ENSG00000081479.15 | transcript | ENST00000649046.1 | protein_coding | 4/78 | chr2 | TogoVar | |||||||
LRP2_chr2_169122109_169367534 | 169299135 | GAAAGAAA others(33): Show |
G | intron_variant | MODIFIER | HG02622.hp1 | a0038 | a0038c0124 | a0038c0124t0010 | a0038c0124t0010g0068 | 1 | 228 | 0.0044 | -40 | c.428 others(57): Show |
LRP2 | ENSG00000081479.15 | transcript | ENST00000649046.1 | protein_coding | 4/78 | chr2 | TogoVar | |||||||
LRP2_chr2_169122109_169367534 | 169326741 | GCCCGGCC others(33): Show |
G | intron_variant | MODIFIER | HG01255.hp1 | a0031 | a0031c0161 | a0031c0161t0016 | a0031c0161t0016g0242 | 1 | 248 | 0.0040 | -40 | c.80- others(55): Show |
LRP2 | ENSG00000081479.15 | transcript | ENST00000649046.1 | protein_coding | 1/78 | chr2 | TogoVar | |||||||
LRP2_chr2_169122109_169367534 | 169326761 | AGGAAGTG others(33): Show |
A | intron_variant | MODIFIER | HG02257.hp1 HG02572.hp1 HG02615.hp2 others(2): Show |
a0003a0009a0021others(1): Show | a0003c0056a0009c0044a0009c0065others(2): Show | a0003c0056t0008a0009c0044t0003a0009c0065t0002others(2): Show | a0003c0056t0008g0034 a0009c0044t0003g0147 a0009c0065t0002g0154 others(2): Show |
5 | 248 | 0.0202 | -40 | c.80- others(55): Show |
LRP2 | ENSG00000081479.15 | transcript | ENST00000649046.1 | protein_coding | 1/78 | chr2 | TogoVar | |||||||
LRRC27_chr10_132327193_132386508 | 132385850 | GTGGTGCG others(33): Show |
G | downstream_gene_variant | MODIFIER | HG01099.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0198 | 1 | 288 | 0.0035 | -40 | c.*10 others(53): Show |
LRRC27 | ENSG00000148814.18 | transcript | ENST00000368614.8 | protein_coding | 4343 | chr10 | TogoVar | |||||||
LRRC37A3_chr17_64849130_64924478 | 64866559 | CATATATA others(33): Show |
C | intron_variant | MODIFIER | HG03195.hp1 HG03579.hp1 |
a0013 | a0013c0010 | a0013c0010t0001 | a0013c0010t0001g0124 a0013c0010t0001g0126 |
2 | 109 | 0.0183 | -40 | c.305 others(59): Show |
LRRC37A3 | ENSG00000176809.11 | transcript | ENST00000584306.6 | protein_coding | 10/14 | chr17 | TogoVar | |||||||
LRRC38_chr1_13469973_13519003 | 13481755 | TTCTTTCC others(33): Show |
T | intron_variant | MODIFIER | HG01884.hp1 HG02486.hp1 HG03098.hp2 |
a0001a0006 | a0001c0001a0006c0012 | a0001c0001t0001a0006c0012t0001 | a0001c0001t0001g0141 a0001c0001t0001g0334 a0006c0012t0001g0217 |
3 | 363 | 0.0083 | -40 | c.632 others(57): Show |
LRRC38 | ENSG00000162494.6 | transcript | ENST00000376085.4 | protein_coding | 1/1 | chr1 | TogoVar | |||||||
LRRC38_chr1_13469973_13519003 | 13481759 | TTCCCTCT others(33): Show |
T | intron_variant | MODIFIER | HG02630.hp1 HG02647.hp2 HG02723.hp2 others(3): Show |
a0001a0002a0003 | a0001c0001a0002c0003a0003c0004 | a0001c0001t0001a0002c0003t0001a0003c0004t0002 | a0001c0001t0001g0349 a0002c0003t0001g0319 a0002c0003t0001g0347 others(2): Show |
6 | 428 | 0.0140 | -40 | c.632 others(57): Show |
LRRC38 | ENSG00000162494.6 | transcript | ENST00000376085.4 | protein_coding | 1/1 | chr1 | TogoVar | |||||||
LRRC3B_chr3_26617772_26715776 | 26636940 | TTCTTTCT others(33): Show |
T | intron_variant | MODIFIER | HG00597.hp2 HG02523.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0111 a0001c0001t0001g0112 |
2 | 367 | 0.0054 | -40 | c.-16 others(61): Show |
LRRC3B | ENSG00000179796.13 | transcript | ENST00000396641.7 | protein_coding | 1/1 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
LRRC4C_chr11_40109209_41464652 | 41303616 | GGCCGCCA others(33): Show |
G | intron_variant | MODIFIER | HG01261.hp2 HG02280.hp1 HG02717.hp2 others(3): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0002t0001 | a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0039 others(3): Show |
6 | 48 | 0.1250 | -40 | c.-49 others(63): Show |
LRRC4C | ENSG00000148948.8 | transcript | ENST00000528697.6 | protein_coding | 1/6 | chr11 | TogoVar | |||||||
LRRC7_chr1_69562922_70149364 | 69717813 | AGAAAGAA others(33): Show |
A | intron_variant | MODIFIER | HG01515.hp2 HG02145.hp1 HG02647.hp1 others(4): Show |
a0001a0003a0005 | a0001c0001a0001c0009a0003c0007others(1): Show | a0001c0001t0001a0001c0001t0006a0001c0001t0013others(3): Show | a0001c0001t0001g0087 a0001c0001t0001g0099 a0001c0001t0006g0081 others(4): Show |
7 | 106 | 0.0660 | -40 | c.100 others(59): Show |
LRRC7 | ENSG00000033122.21 | transcript | ENST00000651989.2 | protein_coding | 2/26 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
LRRFIP2_chr3_37047626_37179582 | 37051533 | AGAAAGGA others(33): Show |
A | downstream_gene_variant | MODIFIER | NA18982.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0221 | 1 | 266 | 0.0038 | -40 | c.*22 others(51): Show |
LRRFIP2 | ENSG00000093167.18 | transcript | ENST00000336686.9 | protein_coding | 1092 | chr3 | TogoVar | |||||||
LRRFIP2_chr3_37047626_37179582 | 37156813 | CCTAGTAG others(33): Show |
C | intron_variant | MODIFIER | NA19009.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0116 | 1 | 266 | 0.0038 | -40 | c.-55 others(57): Show |
LRRFIP2 | ENSG00000093167.18 | transcript | ENST00000336686.9 | protein_coding | 1/27 | chr3 | TogoVar | |||||||
LRRK2_chr12_40219997_40374285 | 40282009 | GCTTCCCT others(33): Show |
G | intron_variant | MODIFIER | HG00621.hp2 HG00738.hp1 HG01069.hp2 others(18): Show |
a0001a0003a0014others(1): Show | a0001c0005a0003c0004a0003c0011others(2): Show | a0001c0005t0003a0001c0005t0005a0003c0004t0004others(3): Show | a0001c0005t0003g0217 a0001c0005t0005g0152 a0001c0005t0005g0207 others(18): Show |
21 | 134 | 0.1567 | -40 | c.224 others(59): Show |
LRRK2 | ENSG00000188906.17 | transcript | ENST00000298910.12 | protein_coding | 18/50 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
LRRK2_chr12_40219997_40374285 | 40282049 | CCTTCCCT others(33): Show |
C | intron_variant | MODIFIER | HG00735.hp2 HG01361.hp1 HG02486.hp1 others(2): Show |
a0004 | a0004c0006a0004c0045a0004c0054 | a0004c0006t0001a0004c0045t0001a0004c0054t0001 | a0004c0006t0001g0221 a0004c0006t0001g0358 a0004c0006t0001g0370 others(2): Show |
5 | 380 | 0.0132 | -40 | c.224 others(59): Show |
LRRK2 | ENSG00000188906.17 | transcript | ENST00000298910.12 | protein_coding | 18/50 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
LRRK2_chr12_40219997_40374285 | 40353239 | AGGCAAAG others(33): Show |
A | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(248): Show |
a0001a0002a0003others(21): Show | a0001c0002a0001c0003a0001c0005others(47): Show | a0001c0002t0003a0001c0003t0002a0001c0003t0003others(62): Show | a0001c0002t0003g0165 a0001c0002t0003g0197 a0001c0003t0002g0170 others(247): Show |
251 | 380 | 0.6605 | -40 | c.657 others(59): Show |
LRRK2 | ENSG00000188906.17 | transcript | ENST00000298910.12 | protein_coding | 44/50 | INFO_REALIGN_3_PRIME | chr12 | TogoVar |