view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
RIBC2_chr22_45408693_45437509 | 45436165 | CACTTTGT others(37): Show |
C | downstream_gene_variant | MODIFIER | NA18965.hp1 | a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0012 | 1 | 422 | 0.0024 | -44 | c.*38 others(55): Show |
RIBC2 | ENSG00000128408.9 | transcript | ENST00000614167.2 | protein_coding | 3657 | chr22 | TogoVar | |||||||
RIMBP3B_chr22_21378751_21394478 | 21383034 | CTGAGGCC others(37): Show |
C | upstream_gene_variant | MODIFIER | HG01433.hp1 | a0001 | a0001c0002 | a0001c0002t0003 | a0001c0002t0003g0000 | 1 | 118 | 0.0085 | -44 | c.-82 others(53): Show |
RIMBP3B | ENSG00000274600.2 | transcript | ENST00000620804.2 | protein_coding | 716 | chr22 | TogoVar | |||||||
RMND1_chr6_151399762_151457126 | 151450359 | GGGGTCAG others(37): Show |
G | intron_variant | MODIFIER | HG02109.hp2 HG02717.hp2 HG02965.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0005 | a0001c0001t0002g0258 a0001c0001t0005g0017 a0001c0001t0005g0259 others(2): Show |
6 | 390 | 0.0154 | -44 | c.-15 others(61): Show |
RMND1 | ENSG00000155906.20 | transcript | ENST00000444024.3 | protein_coding | 1/11 | chr6 | TogoVar | |||||||
RNF126_chr19_642526_668214 | 644453 | AGATCCCC others(37): Show |
A | downstream_gene_variant | MODIFIER | HG02895.hp2 NA19002.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0015 a0001c0001t0002g0023 |
2 | 432 | 0.0046 | -44 | c.*36 others(55): Show |
RNF126 | ENSG00000070423.18 | transcript | ENST00000292363.10 | protein_coding | 3072 | chr19 | TogoVar | |||||||
RNF213_chr17_80255852_80403794 | 80272840 | CCACTGGG others(37): Show |
C | intron_variant | MODIFIER | HG02965.hp2 | a0008 | a0008c0013 | a0008c0013t0017 | a0008c0013t0017g0241 | 1 | 290 | 0.0034 | -44 | c.98- others(57): Show |
RNF213 | ENSG00000173821.20 | transcript | ENST00000582970.6 | protein_coding | 2/67 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
RNF223_chr1_1065967_1079306 | 1075620 | GGGGGTTG others(37): Show |
G | upstream_gene_variant | MODIFIER | HG01123.hp1 HG02258.hp2 HG02818.hp2 others(8): Show |
a0002a0008 | a0002c0002a0008c0009 | a0002c0002t0004a0002c0002t0010a0002c0002t0015others(1): Show | a0002c0002t0004g0006 a0002c0002t0004g0043 a0002c0002t0010g0018 others(2): Show |
11 | 322 | 0.0342 | -44 | c.-16 others(55): Show |
RNF223 | ENSG00000237330.3 | transcript | ENST00000453464.3 | protein_coding | 1315 | chr1 | TogoVar | |||||||
RNF26_chr11_119329527_119342309 | 119336835 | CATTTGGG others(37): Show |
C | 3_prime_UTR_variant | MODIFIER | HG00099.hp2 | a0001 | a0001c0001 | a0001c0001t0013 | a0001c0001t0013g0000 | 1 | 420 | 0.0024 | -44 | c.*41 others(53): Show |
RNF26 | ENSG00000173456.5 | transcript | ENST00000311413.5 | protein_coding | 1/1 | 412 | chr11 | TogoVar | ||||||
RNF38_chr9_36331400_36405269 | 36341793 | AATATATA others(37): Show |
A | intron_variant | MODIFIER | HG02258.hp2 HG02572.hp2 HG02647.hp1 others(3): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0004a0001c0003t0005 | a0001c0001t0004g0031 a0001c0001t0004g0033 a0001c0001t0004g0036 others(3): Show |
6 | 377 | 0.0159 | -44 | c.148 others(61): Show |
RNF38 | ENSG00000137075.18 | transcript | ENST00000259605.11 | protein_coding | 11/11 | chr9 | TogoVar | |||||||
RNF38_chr9_36331400_36405269 | 36341823 | TATATATA others(37): Show |
T | intron_variant | MODIFIER | HG01891.hp2 | a0001 | a0001c0001 | a0001c0001t0015 | a0001c0001t0015g0077 | 1 | 400 | 0.0025 | -44 | c.148 others(61): Show |
RNF38 | ENSG00000137075.18 | transcript | ENST00000259605.11 | protein_coding | 11/11 | chr9 | TogoVar | |||||||
RNGTT_chr6_88604897_88968618 | 88698125 | TACATATA others(37): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG00733.hp1 HG01069.hp1 others(30): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003 | a0001c0001t0001g0001 a0001c0001t0001g0010 a0001c0001t0001g0011 others(30): Show |
33 | 167 | 0.1976 | -44 | c.144 others(65): Show |
RNGTT | ENSG00000111880.16 | transcript | ENST00000369485.9 | protein_coding | 13/15 | chr6 | TogoVar | |||||||
ROBO1_chr3_78592239_79772998 | 78711344 | CTTCCTCC others(37): Show |
C | intron_variant | MODIFIER | HG02055.hp1 | a0002 | a0002c0004 | a0002c0004t0001 | a0002c0004t0001g0015 | 1 | 43 | 0.0233 | -44 | c.104 others(63): Show |
ROBO1 | ENSG00000169855.21 | transcript | ENST00000464233.6 | protein_coding | 8/30 | chr3 | TogoVar | |||||||
ROBO2_chr3_77035099_77654964 | 77200263 | TATTTTAT others(37): Show |
T | intron_variant | MODIFIER | HG02630.hp2 HG02922.hp2 HG02970.hp2 others(5): Show |
a0001a0007 | a0001c0001a0001c0002a0001c0006others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0021others(5): Show | a0001c0001t0001g0146 a0001c0001t0002g0106 a0001c0001t0021g0016 others(5): Show |
8 | 160 | 0.0500 | -44 | c.388 others(65): Show |
ROBO2 | ENSG00000185008.19 | transcript | ENST00000696593.1 | protein_coding | 2/27 | chr3 | TogoVar | |||||||
RORB_chr9_74492335_74698177 | 74549535 | GGGAGGGA others(37): Show |
G | intron_variant | MODIFIER | NA18951.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0198 | 1 | 181 | 0.0055 | -44 | c.7+5 others(59): Show |
RORB | ENSG00000198963.11 | transcript | ENST00000376896.8 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
RORB_chr9_74492335_74698177 | 74549539 | GGGAGGGA others(37): Show |
G | intron_variant | MODIFIER | HG00323.hp2 HG00738.hp2 HG01070.hp1 others(13): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(5): Show | a0001c0001t0001g0067 a0001c0001t0001g0120 a0001c0001t0001g0134 others(13): Show |
16 | 142 | 0.1127 | -44 | c.7+5 others(59): Show |
RORB | ENSG00000198963.11 | transcript | ENST00000376896.8 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
ROS1_chr6_117282353_117430942 | 117326086 | TAAGATTA others(37): Show |
T | intron_variant | MODIFIER | HG02074.hp2 HG02647.hp1 HG02895.hp1 others(8): Show |
a0011a0022a0033others(4): Show | a0011c0015a0022c0039a0033c0053others(4): Show | a0011c0015t0001a0011c0015t0002a0022c0039t0001others(5): Show | a0011c0015t0001g0189 a0011c0015t0001g0192 a0011c0015t0002g0165 others(8): Show |
11 | 320 | 0.0344 | -44 | c.553 others(60): Show |
ROS1 | ENSG00000047936.11 | transcript | ENST00000368507.8 | protein_coding | 34/43 | chr6 | TogoVar | |||||||
RPH3AL_chr17_207389_357807 | 300520 | CTAGACCT others(37): Show |
C | intron_variant | MODIFIER | HG01358.hp1 HG01361.hp1 HG01496.hp1 others(14): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(10): Show | a0001c0001t0001g0030 a0001c0001t0001g0043 a0001c0001t0003g0096 others(14): Show |
17 | 132 | 0.1288 | -44 | c.352 others(63): Show |
RPH3AL | ENSG00000181031.16 | transcript | ENST00000331302.12 | protein_coding | 5/9 | chr17 | TogoVar | |||||||
RPS16_chr19_39428137_39440949 | 39429585 | GCAGTGGT others(37): Show |
G | downstream_gene_variant | MODIFIER | HG02074.hp1 HG02165.hp1 HG03579.hp2 others(3): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001 | a0001c0001t0001g0003 a0001c0002t0001g0001 |
6 | 408 | 0.0147 | -44 | c.*36 others(55): Show |
RPS16 | ENSG00000105193.9 | transcript | ENST00000251453.8 | protein_coding | 3551 | chr19 | TogoVar | |||||||
RPS6KA2_chr6_166404364_166632251 | 166467194 | ACTCACTC others(37): Show |
A | intron_variant | MODIFIER | HG00609.hp1 HG01074.hp1 HG01081.hp1 others(22): Show |
a0001 | a0001c0001a0001c0002a0001c0006others(13): Show | a0001c0001t0001a0001c0001t0011a0001c0001t0035others(18): Show | a0001c0001t0001g0098 a0001c0001t0001g0137 a0001c0001t0011g0011 others(22): Show |
25 | 242 | 0.1033 | -44 | c.972 others(61): Show |
RPS6KA2 | ENSG00000071242.12 | transcript | ENST00000265678.9 | protein_coding | 11/20 | chr6 | TogoVar | |||||||
RPS6KA2_chr6_166404364_166632251 | 166510552 | CTCATATA others(37): Show |
C | intron_variant | MODIFIER | HG02895.hp1 | a0001 | a0001c0042 | a0001c0042t0014 | a0001c0042t0014g0043 | 1 | 216 | 0.0046 | -44 | c.299 others(59): Show |
RPS6KA2 | ENSG00000071242.12 | transcript | ENST00000265678.9 | protein_coding | 3/20 | chr6 | TogoVar | |||||||
RPS6KA3_chrX_20144911_20271909 | 20268770 | ATGGGGCC others(37): Show |
A | upstream_gene_variant | MODIFIER | HG03492.hp1 | a0001 | a0001c0001 | a0001c0001t0024 | a0001c0001t0024g0145 | 1 | 210 | 0.0048 | -44 | c.-21 others(55): Show |
RPS6KA3 | ENSG00000177189.14 | transcript | ENST00000379565.9 | protein_coding | 1862 | chrX | TogoVar | |||||||
RPS6KB1_chr17_59888121_59955574 | 59909226 | CTTTTTTT others(37): Show |
C | intron_variant | MODIFIER | HG00408.hp1 HG00438.hp2 HG01123.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0118 a0001c0001t0001g0162 a0001c0001t0001g0189 others(1): Show |
4 | 6 | 0.6667 | -44 | c.142 others(61): Show |
RPS6KB1 | ENSG00000108443.14 | transcript | ENST00000225577.9 | protein_coding | 1/14 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
RPS6KC1_chr1_213046241_213279774 | 213119425 | CATATATA others(37): Show |
C | intron_variant | MODIFIER | HG00558.hp1 HG01069.hp2 HG01070.hp1 others(20): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(2): Show | a0001c0001t0001g0007 a0001c0001t0001g0029 a0001c0001t0001g0032 others(20): Show |
23 | 101 | 0.2277 | -44 | c.472 others(61): Show |
RPS6KC1 | ENSG00000136643.12 | transcript | ENST00000366960.8 | protein_coding | 5/14 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
RRAGB_chrX_55712749_55763774 | 55740338 | ATTGTGAT others(37): Show |
A | intron_variant | MODIFIER | HG03516.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0025 | 1 | 274 | 0.0036 | -44 | c.516 others(61): Show |
RRAGB | ENSG00000083750.13 | transcript | ENST00000374941.9 | protein_coding | 5/9 | chrX | TogoVar | |||||||
RSPH14_chr22_23054415_23146990 | 23130059 | AAAAGAAA others(37): Show |
A | intron_variant | MODIFIER | HG01081.hp1 HG01175.hp2 HG01516.hp2 others(8): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0152 a0001c0001t0001g0168 a0001c0001t0001g0212 others(8): Show |
11 | 165 | 0.0667 | -44 | c.421 others(61): Show |
RSPH14 | ENSG00000100218.12 | transcript | ENST00000216036.9 | protein_coding | 4/6 | chr22 | TogoVar | |||||||
RSPO4_chr20_953452_1007311 | 959083 | GAGTGTGG others(37): Show |
G | 3_prime_UTR_variant | MODIFIER | HG02074.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0113 | 1 | 374 | 0.0027 | -44 | c.*12 others(55): Show |
RSPO4 | ENSG00000101282.9 | transcript | ENST00000217260.9 | protein_coding | 5/5 | 1230 | chr20 | TogoVar | ||||||
RSPO4_chr20_953452_1007311 | 985016 | CATCCATC others(37): Show |
C | intron_variant | MODIFIER | HG00408.hp2 HG00423.hp2 HG00438.hp1 others(193): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0003a0002c0002others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(49): Show | a0001c0001t0001g0059 a0001c0001t0001g0142 a0001c0001t0001g0162 others(153): Show |
196 | 374 | 0.5241 | -44 | c.80- others(61): Show |
RSPO4 | ENSG00000101282.9 | transcript | ENST00000217260.9 | protein_coding | 1/4 | chr20 | TogoVar | |||||||
RSPRY1_chr16_57181329_57245469 | 57197923 | GCTACATT others(37): Show |
G | intron_variant | MODIFIER | HG00280.hp1 HG00558.hp1 HG00621.hp1 others(56): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0004a0001c0001t0006others(5): Show | a0001c0001t0003g0003 a0001c0001t0003g0004 a0001c0001t0003g0011 others(50): Show |
59 | 356 | 0.1657 | -44 | c.-15 others(63): Show |
RSPRY1 | ENSG00000159579.14 | transcript | ENST00000394420.9 | protein_coding | 1/14 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
RSU1_chr10_16585611_16822424 | 16645964 | GTGTATAT others(37): Show |
G | intron_variant | MODIFIER | HG03579.hp2 | a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0162 | 1 | 185 | 0.0054 | -44 | c.731 others(63): Show |
RSU1 | ENSG00000148484.18 | transcript | ENST00000345264.10 | protein_coding | 8/8 | chr10 | TogoVar | |||||||
RUNX1_chr21_34782801_35054302 | 34993634 | GACACACA others(37): Show |
G | intron_variant | MODIFIER | HG02486.hp1 HG02572.hp1 HG02615.hp2 others(6): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0001t0025a0001c0001t0028others(3): Show | a0001c0001t0001g0072 a0001c0001t0001g0113 a0001c0001t0001g0147 others(6): Show |
9 | 168 | 0.0536 | -44 | c.58+ others(61): Show |
RUNX1 | ENSG00000159216.19 | transcript | ENST00000675419.1 | protein_coding | 2/8 | chr21 | TogoVar | |||||||
RYR2_chr1_237037184_237838988 | 237380359 | AATATATA others(37): Show |
A | intron_variant | MODIFIER | HG03195.hp2 | a0001 | a0001c0018 | a0001c0018t0029 | a0001c0018t0029g0041 | 1 | 17 | 0.0588 | -44 | c.576 others(61): Show |
RYR2 | ENSG00000198626.18 | transcript | ENST00000366574.7 | protein_coding | 8/104 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SAMD4A_chr14_54562128_54798312 | 54678433 | TTGTGTGT others(37): Show |
T | intron_variant | MODIFIER | HG00140.hp1 HG00597.hp1 HG00597.hp2 others(16): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(9): Show | a0001c0001t0001g0087 a0001c0001t0001g0099 a0001c0001t0002g0150 others(16): Show |
19 | 56 | 0.3393 | -44 | c.197 others(63): Show |
SAMD4A | ENSG00000020577.14 | transcript | ENST00000554335.6 | protein_coding | 2/12 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
SASH1_chr6_148337838_148557044 | 148387560 | TCTTTTCT others(37): Show |
T | intron_variant | MODIFIER | HG01081.hp2 | a0002 | a0002c0002 | a0002c0002t0007 | a0002c0002t0007g0248 | 1 | 320 | 0.0031 | -44 | c.157 others(61): Show |
SASH1 | ENSG00000111961.19 | transcript | ENST00000367467.8 | protein_coding | 1/19 | chr6 | TogoVar | |||||||
SASH1_chr6_148337838_148557044 | 148387566 | CTCTTTCT others(37): Show |
C | intron_variant | MODIFIER | HG01243.hp2 HG01358.hp2 HG01516.hp1 others(13): Show |
a0001a0002a0006 | a0001c0001a0001c0003a0001c0007others(3): Show | a0001c0001t0002a0001c0001t0009a0001c0003t0005others(11): Show | a0001c0001t0002g0221 a0001c0001t0002g0225 a0001c0001t0009g0166 others(13): Show |
16 | 134 | 0.1194 | -44 | c.157 others(61): Show |
SASH1 | ENSG00000111961.19 | transcript | ENST00000367467.8 | protein_coding | 1/19 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | ||||||
SATL1_chrX_85087284_85248779 | 85156813 | TTATATAT others(37): Show |
T | intron_variant | MODIFIER | HG02717.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0053 | 1 | 10 | 0.1000 | -44 | c.-31 others(65): Show |
SATL1 | ENSG00000184788.14 | transcript | ENST00000644105.2 | protein_coding | 2/7 | chrX | TogoVar | |||||||
SBNO2_chr19_1102638_1179268 | 1146761 | TGAGGGTG others(37): Show |
T | intron_variant | MODIFIER | HG02155.hp2 | a0002 | a0002c0003 | a0002c0003t0001 | a0002c0003t0001g0086 | 1 | 202 | 0.0050 | -44 | c.279 others(59): Show |
SBNO2 | ENSG00000064932.16 | transcript | ENST00000361757.8 | protein_coding | 4/31 | chr19 | TogoVar | |||||||
SCARA5_chr8_27864883_27997673 | 27865577 | TTATATAT others(37): Show |
T | downstream_gene_variant | MODIFIER | HG01891.hp1 HG02630.hp1 HG03130.hp1 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0024a0001c0002t0024 | a0001c0001t0024g0131 a0001c0001t0024g0133 a0001c0002t0024g0121 |
3 | 12 | 0.2500 | -44 | c.*63 others(55): Show |
SCARA5 | ENSG00000168079.17 | transcript | ENST00000354914.8 | protein_coding | 4305 | chr8 | TogoVar | |||||||
SCCPDH_chr1_246719409_246773137 | 246764930 | GGTATAAT others(37): Show |
G | intron_variant | MODIFIER | HG03139.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0275 | 1 | 408 | 0.0025 | -44 | c.110 others(61): Show |
SCCPDH | ENSG00000143653.10 | transcript | ENST00000366510.4 | protein_coding | 10/11 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SCCPDH_chr1_246719409_246773137 | 246764974 | AGTATAAT others(37): Show |
A | intron_variant | MODIFIER | HG00735.hp1 HG01175.hp1 HG01433.hp2 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0006 | a0001c0001t0001g0134 a0001c0001t0006g0028 a0001c0001t0006g0029 others(3): Show |
8 | 115 | 0.0696 | -44 | c.110 others(61): Show |
SCCPDH | ENSG00000143653.10 | transcript | ENST00000366510.4 | protein_coding | 10/11 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SCD5_chr4_82624539_82803796 | 82712243 | CATATATA others(37): Show |
C | intron_variant | MODIFIER | HG01109.hp2 HG02976.hp1 HG03225.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0005a0001c0001t0012others(1): Show | a0001c0001t0002g0042 a0001c0001t0002g0080 a0001c0001t0005g0077 others(3): Show |
6 | 93 | 0.0645 | -44 | c.233 others(61): Show |
SCD5 | ENSG00000145284.12 | transcript | ENST00000319540.9 | protein_coding | 1/4 | chr4 | TogoVar | |||||||
SCEL_chr13_77530706_77650263 | 77531009 | ATATTTGC others(37): Show |
A | upstream_gene_variant | MODIFIER | NA19081.hp2 | a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0023 | 1 | 354 | 0.0028 | -44 | c.-48 others(55): Show |
SCEL | ENSG00000136155.17 | transcript | ENST00000349847.4 | protein_coding | 4696 | chr13 | TogoVar | |||||||
SCHIP1_chr3_159268244_159902359 | 159704864 | TTTTCTTT others(37): Show |
T | intron_variant | MODIFIER | HG01243.hp1 HG03579.hp2 |
a0001 | a0001c0001a0001c0004 | a0001c0001t0001a0001c0004t0001 | a0001c0001t0001g0087 a0001c0004t0001g0018 |
2 | 74 | 0.0270 | -44 | c.64- others(61): Show |
SCHIP1 | ENSG00000283154.3 | transcript | ENST00000638749.2 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SCHIP1_chr3_159268244_159902359 | 159704900 | CTTTCTTT others(37): Show |
C | intron_variant | MODIFIER | HG02630.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0003 | 1 | 88 | 0.0114 | -44 | c.64- others(61): Show |
SCHIP1 | ENSG00000283154.3 | transcript | ENST00000638749.2 | protein_coding | 1/7 | chr3 | TogoVar | |||||||
SCHIP1_chr3_159268244_159902359 | 159828388 | CATATATA others(37): Show |
C | intron_variant | MODIFIER | HG02922.hp2 HG03579.hp1 |
a0002 | a0002c0003 | a0002c0003t0001 | a0002c0003t0001g0034 a0002c0003t0001g0091 |
2 | 51 | 0.0392 | -44 | c.760 others(63): Show |
SCHIP1 | ENSG00000283154.3 | transcript | ENST00000638749.2 | protein_coding | 2/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SCN11A_chr3_38840764_39056944 | 38938522 | ATATATAT others(37): Show |
A | intron_variant | MODIFIER | NA19063.hp1 | a0001 | a0001c0002 | a0001c0002t0004 | a0001c0002t0004g0053 | 1 | 297 | 0.0034 | -44 | c.488 others(61): Show |
SCN11A | ENSG00000168356.13 | transcript | ENST00000302328.9 | protein_coding | 7/29 | chr3 | TogoVar | |||||||
SCN11A_chr3_38840764_39056944 | 38963380 | TATATATG others(37): Show |
T | intron_variant | MODIFIER | NA18947.hp2 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0149 | 1 | 312 | 0.0032 | -44 | c.-27 others(63): Show |
SCN11A | ENSG00000168356.13 | transcript | ENST00000302328.9 | protein_coding | 2/29 | chr3 | TogoVar | |||||||
SCT_chr11_621309_632181 | 628919 | TTCTTTCT others(37): Show |
T | upstream_gene_variant | MODIFIER | HG02896.hp1 HG03453.hp1 |
a0001 | a0001c0003 | a0001c0003t0001 | a0001c0003t0001g0004 | 2 | 406 | 0.0049 | -44 | c.-18 others(55): Show |
SCT | ENSG00000070031.4 | transcript | ENST00000176195.4 | protein_coding | 1739 | chr11 | TogoVar | |||||||
SCT_chr11_621309_632181 | 628921 | CTTTCTTT others(37): Show |
C | upstream_gene_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00323.hp1 others(68): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 71 | 402 | 0.1766 | -44 | c.-18 others(55): Show |
SCT | ENSG00000070031.4 | transcript | ENST00000176195.4 | protein_coding | 1741 | chr11 | TogoVar | |||||||
SCUBE1_chr22_43192280_43348372 | 43280875 | TGTCACCT others(37): Show |
T | intron_variant | MODIFIER | HG00597.hp1 HG02056.hp1 HG02080.hp1 others(7): Show |
a0001a0002a0006others(1): Show | a0001c0035a0002c0002a0002c0005others(2): Show | a0001c0035t0005a0002c0002t0002a0002c0002t0007others(3): Show | a0001c0035t0005g0208 a0002c0002t0002g0035 a0002c0002t0002g0083 others(7): Show |
10 | 276 | 0.0362 | -44 | c.484 others(63): Show |
SCUBE1 | ENSG00000159307.20 | transcript | ENST00000360835.9 | protein_coding | 4/21 | chr22 | TogoVar | |||||||
SCUBE1_chr22_43192280_43348372 | 43280876 | GTCACCTC others(37): Show |
G | intron_variant | MODIFIER | HG02129.hp2 | a0002 | a0002c0002 | a0002c0002t0002 | a0002c0002t0002g0115 | 1 | 278 | 0.0036 | -44 | c.484 others(63): Show |
SCUBE1 | ENSG00000159307.20 | transcript | ENST00000360835.9 | protein_coding | 4/21 | chr22 | TogoVar | |||||||
SCUBE1_chr22_43192280_43348372 | 43280995 | CTGTCACC others(37): Show |
C | intron_variant | MODIFIER | HG02074.hp1 HG02109.hp2 HG02559.hp1 others(5): Show |
a0001a0002 | a0001c0004a0001c0012a0002c0002others(2): Show | a0001c0004t0005a0001c0012t0090a0002c0002t0002others(4): Show | a0001c0004t0005g0232 a0001c0012t0090g0277 a0002c0002t0002g0083 others(5): Show |
8 | 274 | 0.0292 | -44 | c.484 others(63): Show |
SCUBE1 | ENSG00000159307.20 | transcript | ENST00000360835.9 | protein_coding | 4/21 | chr22 | TogoVar |