regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SLC23A2_chr20_4847358_5006510 | 4999656 | GTGCTGGG others(37): Show |
G | intron_variant | MODIFIER | HG02257.hp1 | a0001 | a0001c0003 | a0001c0003t0003 | a0001c0003t0003g0188 | 1 | 204 | 0.0049 | -44 | c.-28 others(63): Show |
SLC23A2 | ENSG00000089057.15 | transcript | ENST00000338244.6 | protein_coding | 1/16 | chr20 | TogoVar | ||||||
SLC25A21_chr14_36672921_37177606 | 37098718 | TAGATAGA others(37): Show |
T | intron_variant | MODIFIER | NA19060.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0065 | 1 | 164 | 0.0061 | -44 | c.70+ others(61): Show |
SLC25A21 | ENSG00000183032.12 | transcript | ENST00000331299.6 | protein_coding | 1/9 | chr14 | TogoVar | ||||||
SLC28A1_chr15_84879662_84950798 | 84889665 | CTTCCTTC others(37): Show |
C | intron_variant | MODIFIER | HG00597.hp1 HG02055.hp1 HG02886.hp1 |
a0003a0010a0019 | a0003c0007a0010c0039a0019c0062 | a0003c0007t0002a0010c0039t0001a0019c0062t0003 | a0003c0007t0002g0179a0010c0039t0001g0269a0019c0062t0003g0270 | 3 | 396 | 0.0076 | -44 | c.186 others(59): Show |
SLC28A1 | ENSG00000156222.12 | transcript | ENST00000394573.6 | protein_coding | 4/18 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
SLC28A1_chr15_84879662_84950798 | 84889677 | TTTCCTTC others(37): Show |
T | intron_variant | MODIFIER | HG00323.hp2 HG00408.hp1 HG00438.hp1 others(62): Show |
a0001a0002a0003others(8): Show | a0001c0002a0001c0004a0001c0008others(13): Show | a0001c0002t0001a0001c0002t0002a0001c0004t0001others(18): Show | a0001c0002t0001g0068a0001c0002t0001g0075a0001c0002t0001g0077others(62): Show | 65 | 396 | 0.1641 | -44 | c.186 others(59): Show |
SLC28A1 | ENSG00000156222.12 | transcript | ENST00000394573.6 | protein_coding | 4/18 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
SLC28A1_chr15_84879662_84950798 | 84906537 | TTTCTTTC others(37): Show |
T | intron_variant | MODIFIER | HG00280.hp1 HG00280.hp2 HG00639.hp1 others(18): Show |
a0006a0011a0013 | a0006c0011a0006c0016a0011c0017others(2): Show | a0006c0011t0003a0006c0016t0001a0011c0017t0001others(2): Show | a0006c0011t0003g0292a0006c0011t0003g0298a0006c0011t0003g0304others(18): Show | 21 | 396 | 0.0530 | -44 | c.717 others(59): Show |
SLC28A1 | ENSG00000156222.12 | transcript | ENST00000394573.6 | protein_coding | 8/18 | chr15 | TogoVar | ||||||
SLC2A12_chr6_133982581_134057624 | 134032424 | ATTTATAT others(37): Show |
A | intron_variant | MODIFIER | HG01175.hp1 HG03516.hp1 |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0017 | a0001c0001t0002g0078a0001c0001t0017g0139 | 2 | 338 | 0.0059 | -44 | c.104 others(61): Show |
SLC2A12 | ENSG00000146411.6 | transcript | ENST00000275230.6 | protein_coding | 1/4 | chr6 | TogoVar | ||||||
SLC2A13_chr12_39750025_40111081 | 39820717 | TTATATAT others(37): Show |
T | intron_variant | MODIFIER | HG00280.hp2 HG00408.hp1 HG00408.hp2 others(150): Show |
a0001 | a0001c0001a0001c0002a0001c0005 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(22): Show | a0001c0001t0001g0027a0001c0001t0001g0029a0001c0001t0001g0031others(150): Show | 153 | 214 | 0.7150 | -44 | c.144 others(63): Show |
SLC2A13 | ENSG00000151229.13 | transcript | ENST00000280871.9 | protein_coding | 7/9 | chr12 | TogoVar | ||||||
SLC2A13_chr12_39750025_40111081 | 39895989 | CATATATG others(37): Show |
C | intron_variant | MODIFIER | HG02970.hp2 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0204 | 1 | 214 | 0.0047 | -44 | c.103 others(65): Show |
SLC2A13 | ENSG00000151229.13 | transcript | ENST00000280871.9 | protein_coding | 4/9 | chr12 | TogoVar | ||||||
SLC2A4RG_chr20_63734776_63749050 | 63744596 | TTCATGAC others(37): Show |
T | downstream_gene_variant | MODIFIER | NA18987.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0016 | 1 | 416 | 0.0024 | -44 | c.*16 others(55): Show |
SLC2A4RG | ENSG00000125520.14 | transcript | ENST00000266077.5 | protein_coding | 547 | chr20 | TogoVar | ||||||
SLC35A5_chr3_112557045_112590579 | 112576360 | TGTGATCC others(37): Show |
T | intron_variant | MODIFIER | HG00280.hp1 HG00408.hp1 HG01069.hp1 others(34): Show |
a0001 | a0001c0003a0001c0008 | a0001c0003t0004a0001c0003t0006a0001c0008t0015 | a0001c0003t0004g0007a0001c0003t0004g0011a0001c0003t0004g0158others(21): Show | 37 | 372 | 0.0995 | -44 | c.428 others(61): Show |
SLC35A5 | ENSG00000138459.9 | transcript | ENST00000492406.6 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
SLC35E2B_chr1_1656478_1697795 | 1666634 | TCCCAGCA others(37): Show |
T | intron_variant | MODIFIER | HG02965.hp1 | a0002 | a0002c0002 | a0002c0002t0028 | a0002c0002t0028g0151 | 1 | 348 | 0.0029 | -44 | c.981 others(59): Show |
SLC35E2B | ENSG00000189339.12 | transcript | ENST00000617444.5 | protein_coding | 9/9 | chr1 | TogoVar | ||||||
SLC35E2B_chr1_1656478_1697795 | 1682002 | AAAAAAAA others(37): Show |
A | intron_variant | MODIFIER | NA18964.hp1 NA18967.hp2 NA18972.hp2 others(2): Show |
a0002 | a0002c0002 | a0002c0002t0015 | a0002c0002t0015g0273a0002c0002t0015g0283a0002c0002t0015g0284others(2): Show | 5 | 348 | 0.0144 | -44 | c.-14 others(63): Show |
SLC35E2B | ENSG00000189339.12 | transcript | ENST00000617444.5 | protein_coding | 2/9 | chr1 | TogoVar | ||||||
SLC38A10_chr17_81239811_81300307 | 81254213 | GCAGATGG others(37): Show |
G | intron_variant | MODIFIER | HG03491.hp1 | a0001 | a0001c0002 | a0001c0002t0004 | a0001c0002t0004g0148 | 1 | 214 | 0.0047 | -44 | c.128 others(62): Show |
SLC38A10 | ENSG00000157637.13 | transcript | ENST00000374759.8 | protein_coding | 11/15 | chr17 | TogoVar | ||||||
SLC43A2_chr17_1564268_1633834 | 1606129 | AGACCCTC others(37): Show |
A | intron_variant | MODIFIER | HG02083.hp2 | a0001 | a0001c0002 | a0001c0002t0106 | a0001c0002t0106g0155 | 1 | 382 | 0.0026 | -44 | c.501 others(61): Show |
SLC43A2 | ENSG00000167703.15 | transcript | ENST00000301335.10 | protein_coding | 5/13 | chr17 | TogoVar | ||||||
SLC43A2_chr17_1564268_1633834 | 1623619 | TGTACCCT others(37): Show |
T | intron_variant | MODIFIER | HG03579.hp1 NA18906.hp1 |
a0001 | a0001c0001a0001c0004 | a0001c0001t0127a0001c0004t0003 | a0001c0001t0127g0376a0001c0004t0003g0268 | 2 | 382 | 0.0052 | -44 | c.160 others(61): Show |
SLC43A2 | ENSG00000167703.15 | transcript | ENST00000301335.10 | protein_coding | 2/13 | chr17 | TogoVar | ||||||
SLC43A3_chr11_57401954_57432121 | 57403506 | AAAGAAGA others(37): Show |
A | downstream_gene_variant | MODIFIER | HG02970.hp2 | a0001 | a0001c0001 | a0001c0001t0009 | a0001c0001t0009g0195 | 1 | 330 | 0.0030 | -44 | c.*42 others(55): Show |
SLC43A3 | ENSG00000134802.18 | transcript | ENST00000395124.6 | protein_coding | 3447 | chr11 | TogoVar | ||||||
SLC47A2_chr17_19673317_19721584 | 19720516 | CCCGCTGT others(37): Show |
C | upstream_gene_variant | MODIFIER | HG01167.hp1 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0280 | 1 | 366 | 0.0027 | -44 | c.-40 others(55): Show |
SLC47A2 | ENSG00000180638.19 | transcript | ENST00000433844.4 | protein_coding | 3933 | chr17 | TogoVar | ||||||
SLC5A11_chr16_24840963_24916626 | 24914721 | ATTAGCCT others(37): Show |
A | downstream_gene_variant | MODIFIER | HG01517.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0235 | 1 | 378 | 0.0027 | -44 | c.*31 others(55): Show |
SLC5A11 | ENSG00000158865.13 | transcript | ENST00000424767.7 | protein_coding | 3096 | chr16 | TogoVar | ||||||
SLC5A4_chr22_32213464_32260347 | 32239554 | ATATATAT others(37): Show |
A | intron_variant | MODIFIER | NA18962.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0233 | 1 | 302 | 0.0033 | -44 | c.478 others(59): Show |
SLC5A4 | ENSG00000100191.6 | transcript | ENST00000266086.6 | protein_coding | 5/14 | chr22 | TogoVar | ||||||
SLC66A2_chr18_79897420_79956653 | 79916142 | GTACCCGC others(37): Show |
G | intron_variant | MODIFIER | HG03139.hp1 HG03710.hp2 |
a0001 | a0001c0001 | a0001c0001t0021a0001c0001t0030 | a0001c0001t0021g0275a0001c0001t0030g0037 | 2 | 352 | 0.0057 | -44 | c.608 others(61): Show |
SLC66A2 | ENSG00000122490.19 | transcript | ENST00000397778.7 | protein_coding | 5/5 | chr18 | TogoVar | ||||||
SLC6A17_chr1_110145494_110207202 | 110200719 | TTGTAGCC others(37): Show |
T | 3_prime_UTR_variant | MODIFIER | HG02300.hp1 | a0002 | a0002c0005 | a0002c0005t0037 | a0002c0005t0037g0086 | 1 | 328 | 0.0031 | -44 | c.*22 others(55): Show |
SLC6A17 | ENSG00000197106.7 | transcript | ENST00000331565.5 | protein_coding | 12/12 | 2277 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||
SLC7A5_chr16_87825023_87874507 | 87840907 | TCTTTAAC others(37): Show |
T | intron_variant | MODIFIER | HG02965.hp2 HG03579.hp2 |
a0001 | a0001c0001 | a0001c0001t0006a0001c0001t0034 | a0001c0001t0006g0130a0001c0001t0034g0006 | 2 | 390 | 0.0051 | -44 | c.770 others(58): Show |
SLC7A5 | ENSG00000103257.9 | transcript | ENST00000261622.5 | protein_coding | 3/9 | chr16 | TogoVar | ||||||
SLC9A3_chr5_465456_529449 | 497701 | ATCTGCCC others(37): Show |
A | intron_variant | MODIFIER | HG00735.hp2 HG01071.hp2 HG01074.hp1 others(4): Show |
a0001a0002 | a0001c0001a0001c0003a0002c0005 | a0001c0001t0007a0001c0001t0011a0001c0003t0008others(2): Show | a0001c0001t0007g0035a0001c0001t0011g0154a0001c0003t0008g0038others(4): Show | 7 | 218 | 0.0321 | -44 | c.212 others(61): Show |
SLC9A3 | ENSG00000066230.12 | transcript | ENST00000264938.8 | protein_coding | 1/16 | chr5 | TogoVar | ||||||
SLC9A3_chr5_465456_529449 | 497715 | TGGGTGGG others(37): Show |
T | intron_variant | MODIFIER | HG00280.hp1 HG01934.hp1 HG02148.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0005a0001c0001t0021 | a0001c0001t0001g0006a0001c0001t0001g0041a0001c0001t0001g0109others(3): Show | 6 | 218 | 0.0275 | -44 | c.212 others(61): Show |
SLC9A3 | ENSG00000066230.12 | transcript | ENST00000264938.8 | protein_coding | 1/16 | chr5 | TogoVar | ||||||
SLC9A7_chrX_46594251_46764118 | 46738031 | AAAAGAAA others(37): Show |
A | intron_variant | MODIFIER | NA19004.hp1 | a0001 | a0001c0007 | a0001c0007t0002 | a0001c0007t0002g0194 | 1 | 250 | 0.0040 | -44 | c.325 others(63): Show |
SLC9A7 | ENSG00000065923.10 | transcript | ENST00000616978.5 | protein_coding | 1/16 | chrX | TogoVar | ||||||
SLC9A9_chr3_143260222_143853468 | 143317693 | CCTTATGT others(37): Show |
C | intron_variant | MODIFIER | HG03139.hp2 HG03453.hp2 |
a0001 | a0001c0002a0001c0004 | a0001c0002t0014a0001c0004t0015 | a0001c0002t0014g0014a0001c0004t0015g0100 | 2 | 108 | 0.0185 | -44 | c.160 others(65): Show |
SLC9A9 | ENSG00000181804.15 | transcript | ENST00000316549.11 | protein_coding | 14/15 | chr3 | TogoVar | ||||||
SLC9A9_chr3_143260222_143853468 | 143705003 | CTATCTAT others(37): Show |
C | intron_variant | MODIFIER | HG00738.hp1 HG01243.hp1 HG01243.hp2 others(32): Show |
a0001a0003 | a0001c0001a0001c0002a0001c0003others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(14): Show | a0001c0001t0001g0004a0001c0001t0001g0006a0001c0001t0001g0016others(32): Show | 35 | 108 | 0.3241 | -44 | c.534 others(63): Show |
SLC9A9 | ENSG00000181804.15 | transcript | ENST00000316549.11 | protein_coding | 4/15 | chr3 | TogoVar | ||||||
SLC9A9_chr3_143260222_143853468 | 143705008 | TATCTATC others(37): Show |
T | intron_variant | MODIFIER | HG01884.hp2 | a0001 | a0001c0013 | a0001c0013t0004 | a0001c0013t0004g0079 | 1 | 108 | 0.0093 | -44 | c.534 others(63): Show |
SLC9A9 | ENSG00000181804.15 | transcript | ENST00000316549.11 | protein_coding | 4/15 | chr3 | TogoVar | ||||||
SLCO3A1_chr15_91848708_92170903 | 92161712 | AAGAACAC others(37): Show |
A | intron_variant | MODIFIER | HG00280.hp2 HG00323.hp1 HG00621.hp1 others(22): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0004others(4): Show | a0001c0001t0002a0001c0001t0004a0001c0001t0008others(17): Show | a0001c0001t0002g0113a0001c0001t0002g0154a0001c0001t0004g0086others(22): Show | 25 | 190 | 0.1316 | -44 | c.175 others(61): Show |
SLCO3A1 | ENSG00000176463.14 | transcript | ENST00000318445.11 | protein_coding | 9/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
SLCO3A1_chr15_91848708_92170903 | 92161801 | AGAACACC others(37): Show |
A | intron_variant | MODIFIER | HG02040.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0075 | 1 | 190 | 0.0053 | -44 | c.175 others(61): Show |
SLCO3A1 | ENSG00000176463.14 | transcript | ENST00000318445.11 | protein_coding | 9/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
SLCO3A1_chr15_91848708_92170903 | 92161887 | GTGGAACA others(37): Show |
G | intron_variant | MODIFIER | NA19030.hp2 | a0001 | a0001c0001 | a0001c0001t0038 | a0001c0001t0038g0181 | 1 | 190 | 0.0053 | -44 | c.175 others(61): Show |
SLCO3A1 | ENSG00000176463.14 | transcript | ENST00000318445.11 | protein_coding | 9/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
SLCO3A1_chr15_91848708_92170903 | 92161917 | TTGCAGTT others(37): Show |
T | intron_variant | MODIFIER | HG00741.hp2 HG02109.hp1 HG02615.hp2 others(9): Show |
a0001 | a0001c0001a0001c0002a0001c0004others(1): Show | a0001c0001t0002a0001c0001t0012a0001c0001t0020others(8): Show | a0001c0001t0002g0112a0001c0001t0012g0007a0001c0001t0012g0043others(9): Show | 12 | 190 | 0.0632 | -44 | c.175 others(61): Show |
SLCO3A1 | ENSG00000176463.14 | transcript | ENST00000318445.11 | protein_coding | 9/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
SLFN12L_chr17_35459254_35542678 | 35539332 | AAAAGAAA others(37): Show |
A | upstream_gene_variant | MODIFIER | HG00323.hp2 HG00408.hp1 HG00408.hp2 others(32): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0002c0003others(4): Show | a0001c0001t0004a0001c0001t0006a0001c0001t0008others(17): Show | a0001c0001t0004g0184a0001c0001t0004g0192a0001c0001t0004g0197others(32): Show | 35 | 360 | 0.0972 | -44 | c.-24 others(55): Show |
SLFN12L | ENSG00000205045.12 | transcript | ENST00000628453.4 | protein_coding | 1655 | chr17 | TogoVar | ||||||
SLFN14_chr17_35538985_35565819 | 35539332 | AAAAGAAA others(37): Show |
A | downstream_gene_variant | MODIFIER | HG00323.hp1 HG00408.hp1 HG00408.hp2 others(40): Show |
a0001a0002a0007others(1): Show | a0001c0001a0002c0002a0002c0024others(2): Show | a0001c0001t0003a0002c0002t0003a0002c0002t0030others(3): Show | a0001c0001t0003g0060a0002c0002t0003g0004a0002c0002t0003g0018others(11): Show | 43 | 428 | 0.1005 | -44 | c.*88 others(55): Show |
SLFN14 | ENSG00000236320.4 | transcript | ENST00000674182.1 | protein_coding | 4652 | chr17 | TogoVar | ||||||
SLIT2_chr4_20246905_20625561 | 20291466 | ATATATAT others(37): Show |
A | intron_variant | MODIFIER | HG02055.hp1 HG02257.hp1 HG02818.hp2 |
a0001 | a0001c0001a0001c0003a0001c0007 | a0001c0001t0061a0001c0003t0060a0001c0007t0011 | a0001c0001t0061g0030a0001c0003t0060g0031a0001c0007t0011g0214 | 3 | 230 | 0.0130 | -44 | c.395 others(63): Show |
SLIT2 | ENSG00000145147.20 | transcript | ENST00000504154.6 | protein_coding | 4/36 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
SLIT3_chr5_168656740_169306139 | 169082320 | TTTTTAAC others(37): Show |
T | intron_variant | MODIFIER | NA18974.hp1 | a0002 | a0002c0030 | a0002c0030t0002 | a0002c0030t0002g0033 | 1 | 132 | 0.0076 | -44 | c.413 others(65): Show |
SLIT3 | ENSG00000184347.16 | transcript | ENST00000519560.6 | protein_coding | 4/35 | chr5 | TogoVar | ||||||
SLX9_chr21_44935029_44981973 | 44981929 | CGGGCCCT others(37): Show |
C | downstream_gene_variant | MODIFIER | HG01978.hp1 HG03669.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0178a0001c0001t0001g0179 | 2 | 334 | 0.0060 | -44 | c.*51 others(55): Show |
SLX9 | ENSG00000160256.14 | transcript | ENST00000291634.11 | protein_coding | 4957 | chr21 | TogoVar | ||||||
SMIM10L1_chr12_11166194_11181016 | 11168263 | AGAAAGAA others(37): Show |
A | upstream_gene_variant | MODIFIER | HG00280.hp1 HG00408.hp1 HG00423.hp2 others(51): Show |
a0001 | a0001c0001a0001c0003a0001c0004 | a0001c0001t0001a0001c0001t0009a0001c0001t0014others(7): Show | a0001c0001t0001g0000a0001c0001t0009g0000a0001c0001t0014g0000others(7): Show | 54 | 397 | 0.1360 | -44 | c.-30 others(55): Show |
SMIM10L1 | ENSG00000256537.5 | transcript | ENST00000622602.2 | protein_coding | 2930 | chr12 | TogoVar | ||||||
SMIM35_chr11_117998634_118091963 | 118048554 | GAAGGAAG others(37): Show |
G | intron_variant | MODIFIER | HG01192.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0197 | 1 | 408 | 0.0025 | -44 | c.8-3 others(59): Show |
SMIM35 | ENSG00000255274.10 | transcript | ENST00000689828.1 | protein_coding | 1/4 | chr11 | TogoVar | ||||||
SMKR1_chr7_129497531_129517918 | 129512411 | TCCCAAAG others(37): Show |
T | frameshift_variant others(1): Show |
HIGH | HG04115.hp2 | a0000 | a0000c0005 | a0000c0005t0005 | a0000c0005t0005g0067 | 1 | 422 | 0.0024 | -44 | c.169 others(51): Show |
p.Pro others(4): Show |
SMKR1 | ENSG00000240204.3 | transcript | ENST00000462322.3 | protein_coding | 2/2 | 463/969 | 169/198 | 57/65 | chr7 | TogoVar | ||
SMURF1_chr7_99022440_99149108 | 99063237 | TTATTTAT others(37): Show |
T | intron_variant | MODIFIER | HG01943.hp1 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0041 | 1 | 264 | 0.0038 | -44 | c.56- others(59): Show |
SMURF1 | ENSG00000198742.10 | transcript | ENST00000361368.7 | protein_coding | 1/17 | chr7 | TogoVar | ||||||
SNRPD3_chr22_24550999_24579971 | 24555094 | CCGCCACC others(37): Show |
C | upstream_gene_variant | MODIFIER | HG03041.hp2 | a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0266 | 1 | 400 | 0.0025 | -44 | c.-99 others(53): Show |
SNRPD3 | ENSG00000100028.12 | transcript | ENST00000215829.8 | protein_coding | 904 | chr22 | TogoVar | ||||||
SNTG2_chr2_945849_1372613 | 1316875 | GAGGCCAG others(37): Show |
G | intron_variant | MODIFIER | HG01891.hp1 HG02559.hp2 HG02976.hp1 others(2): Show |
a0004a0005 | a0004c0004a0005c0015 | a0004c0004t0001a0005c0015t0001 | a0004c0004t0001g0047a0004c0004t0001g0089a0004c0004t0001g0116others(2): Show | 5 | 190 | 0.0263 | -44 | c.148 others(61): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 16/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
SNTG2_chr2_945849_1372613 | 1317231 | CCAGCATT others(37): Show |
C | intron_variant | MODIFIER | HG02559.hp2 | a0005 | a0005c0015 | a0005c0015t0001 | a0005c0015t0001g0103 | 1 | 190 | 0.0053 | -44 | c.148 others(61): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 16/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
SNTG2_chr2_945849_1372613 | 1317304 | GCATTTAG others(37): Show |
G | intron_variant | MODIFIER | HG01891.hp1 HG02976.hp1 HG03225.hp2 others(1): Show |
a0004a0005 | a0004c0004a0005c0015 | a0004c0004t0001a0005c0015t0001 | a0004c0004t0001g0047a0004c0004t0001g0089a0004c0004t0001g0116others(1): Show | 4 | 190 | 0.0211 | -44 | c.148 others(61): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 16/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
SNTG2_chr2_945849_1372613 | 1317664 | CATCAGGT others(37): Show |
C | intron_variant | MODIFIER | HG02486.hp2 | a0003 | a0003c0007 | a0003c0007t0001 | a0003c0007t0001g0108 | 1 | 190 | 0.0053 | -44 | c.148 others(63): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 16/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
SNTG2_chr2_945849_1372613 | 1317671 | TCAGCATT others(37): Show |
T | intron_variant | MODIFIER | HG01891.hp1 HG02559.hp2 HG02976.hp1 others(2): Show |
a0004a0005 | a0004c0004a0005c0015 | a0004c0004t0001a0005c0015t0001 | a0004c0004t0001g0047a0004c0004t0001g0089a0004c0004t0001g0116others(2): Show | 5 | 190 | 0.0263 | -44 | c.148 others(63): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 16/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
SNX29_chr16_11971734_12579287 | 12117046 | TTCAATAC others(37): Show |
T | intron_variant | MODIFIER | HG01257.hp2 NA18990.hp1 |
a0001 | a0001c0002 | a0001c0002t0022a0001c0002t0075 | a0001c0002t0022g0007a0001c0002t0075g0129 | 2 | 176 | 0.0114 | -44 | c.140 others(63): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 11/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |||||
SNX29_chr16_11971734_12579287 | 12117157 | CGAACCAT others(37): Show |
C | intron_variant | MODIFIER | HG01891.hp2 | a0001 | a0001c0003 | a0001c0003t0062 | a0001c0003t0062g0075 | 1 | 176 | 0.0057 | -44 | c.140 others(63): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 11/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |||||
SNX29_chr16_11971734_12579287 | 12117195 | CGCGGATG others(37): Show |
C | intron_variant | MODIFIER | HG01099.hp1 HG01261.hp2 HG01346.hp2 others(16): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0002a0001c0001t0034a0001c0002t0024others(15): Show | a0001c0001t0002g0081a0001c0001t0034g0063a0001c0002t0024g0050others(16): Show | 19 | 176 | 0.1080 | -44 | c.140 others(63): Show |
SNX29 | ENSG00000048471.14 | transcript | ENST00000566228.6 | protein_coding | 11/20 | INFO_REALIGN_3_PRIME | chr16 | TogoVar |