Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Chr

Chromosome name (e.g., chr11).

Snpeff genename

Exact SnpEff gene name.

Sampleids

Target sampleid (e.g. HG02615).

Snpeff haplotype class

Haplotype-annotation class (e.g., ahapid, ahapid+chapid).

Snpeff annotation impact

Exact impact level (e.g., HIGH, MODERATE, LOW).

Snpeff annotation impact detail

Keyword match in SnpEff annotation.

Hapid

One or more haplotype IDs (comma-separated; e.g., a0001, a01, a0001c0001, a01c02, a1c2, a0001c0001t0005, a0001c0001t0005g0018).

Samplehapid

Sample haplotype IDs to include (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

No_hapid

Haplotype IDs to exclude (comma-separated; e.g., a0001, a0002, a0001c0001, a0001c0001t0005, a1, a01).

No_samplehapid

Sample haplotype IDs to exclude (comma-separated; e.g., HG02257.hp1, HG02615.hp2, HG00673.hp2).

Start

Start position (GRCh38).

End

End position (GRCh38).

Minac

Minimum alternate allele count (≥).

Maxac

Maximum alternate allele count (≤).

Minlen

Minimum variant length (≥).

Maxlen

Maximum variant length (≤).

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
TENM1_chrX_124370903_125209312	124849418	TTTTTTTC others(37): Show TTTTTTTCTCTCTCTCTCTCTCTCTGTTGCTGGCTTAGACAAAGC	T T	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02258.hp1 HG02559.hp1 others(6): Show HG02109.hp1 HG02258.hp1 HG02559.hp1 HG03130.hp1 HG03209.hp1 NA18906.hp1 NA18906.hp2 NA19030.hp2 NA19043.hp1	a0001 a0003 a0006 others(1): Show a0001 a0003 a0006 a0012	a0001c0001 a0001c0003 a0001c0007 others(4): Show a0001c0001 a0001c0003 a0001c0007 a0001c0034 a0003c0032 a0006c0033 a0012c0009	a0001c0001t0001 a0001c0003t0005 a0001c0007t0001 others(6): Show a0001c0001t0001 a0001c0003t0005 a0001c0007t0001 a0001c0007t0002 a0001c0007t0012 a0001c0034t0006 a0003c0032t0015 a0006c0033t0007 a0012c0009t0027	a0001c0001t0001g0056 a0001c0003t0005g0112 a0001c0007t0001g0011 others(6): Show a0001c0001t0001g0056 a0001c0003t0005g0112 a0001c0007t0001g0011 a0001c0007t0002g0075 a0001c0007t0012g0114 a0001c0034t0006g0074 a0003c0032t0015g0094 a0006c0033t0007g0115 a0012c0009t0027g0140	9	140	0.0643	-44	c.535 others(63): Show c.535+44834_535+44877delGCTTTGTCTAAGCCAGCAACAGAGAG AGAGAGAGAGAGAAAAAA	TENM1	ENSG00000009694.14	transcript	ENST00000422452.4	protein_coding	6/34			chrX	TogoVar
TENM2_chr5_166974029_168269157	167974181	AAGGAAGG others(37): Show AAGGAAGGAAGGAAGGGAGAAAGGGAGGGAGGGAGGGAGGGAGGG	A A	intron_variant intron_variant	MODIFIER	HG03486.hp2 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0049 a0001c0001t0001g0049	1	54	0.0185	-44	c.948 others(63): Show c.948-18747_948-18704delGAGAAAGGGAGGGAGGGAGGGAGGGA GGGAGGAAGGAAGGAAGG	TENM2	ENSG00000145934.17	transcript	ENST00000518659.6	protein_coding	6/30		INFO_REALIGN_3_PRIME	chr5	TogoVar
TENT2_chr5_79607441_79693246	79666495	TCATCACC others(37): Show TCATCACCATGCCCAGCTAATCTTTCTATTTTTTTTAGAGATAGG	T T	intron_variant intron_variant	MODIFIER	HG02155.hp2 NA18945.hp2 NA18972.hp1 others(2): Show HG02155.hp2 NA18945.hp2 NA18972.hp1 NA18975.hp2 NA19077.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0002 a0001c0001t0003	a0001c0001t0002g0036 a0001c0001t0002g0046 a0001c0001t0002g0063 others(2): Show a0001c0001t0002g0036 a0001c0001t0002g0046 a0001c0001t0002g0063 a0001c0001t0002g0087 a0001c0001t0003g0041	5	344	0.0145	-44	c.107 others(63): Show c.1072-2352_1072-2309delCATCACCATGCCCAGCTAATCTTTCT ATTTTTTTTAGAGATAGG	TENT2	ENSG00000164329.15	transcript	ENST00000453514.6	protein_coding	11/14		INFO_REALIGN_3_PRIME	chr5	TogoVar
TERT_chr5_1248167_1300068	1272939	CCTGTGAC others(37): Show CCTGTGACCGATCGCCATCCAGTCACCACACATCAGACCCCCGGG	C C	intron_variant intron_variant	MODIFIER	NA20129.hp1 NA20129.hp1	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0001 a0001c0005t0001	a0001c0005t0001g0139 a0001c0005t0001g0139	1	392	0.0026	-44	c.228 others(61): Show c.2287-703_2287-660delCCCGGGGGTCTGATGTGTGGTGACTGGA TGGCGATCGGTCACAG	TERT	ENSG00000164362.21	transcript	ENST00000310581.10	protein_coding	6/15			chr5	TogoVar
TERT_chr5_1248167_1300068	1272940	CTGTGACC others(37): Show CTGTGACCGATCGCCATCCAGTCACCACACATCAGACCCCCGGGA	C C	intron_variant intron_variant	MODIFIER	HG01496.hp2 HG01496.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0136 a0001c0001t0001g0136	1	392	0.0026	-44	c.228 others(61): Show c.2287-704_2287-661delTCCCGGGGGTCTGATGTGTGGTGACTGG ATGGCGATCGGTCACA	TERT	ENSG00000164362.21	transcript	ENST00000310581.10	protein_coding	6/15			chr5	TogoVar
TET2_chr4_105141876_105284803	105284094	ACGTATAT others(37): Show ACGTATATATATATATGTATATATATATACACATATATATATATT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01070.hp1 NA18946.hp2 NA18947.hp2 HG01070.hp1 NA18946.hp2 NA18947.hp2	a0004 a0004	a0004c0003 a0004c0003	a0004c0003t0002 a0004c0003t0021 a0004c0003t0002 a0004c0003t0021	a0004c0003t0002g0112 a0004c0003t0002g0113 a0004c0003t0021g0117 a0004c0003t0002g0112 a0004c0003t0002g0113 a0004c0003t0021g0117	3	348	0.0086	-44	c.75 others(55): Show c.7576_*7619delCGTATATATATATATGTATATATATATACACATA TATATATATT	TET2	ENSG00000168769.14	transcript	ENST00000380013.9	protein_coding		4292		chr4	TogoVar
TEX11_chrX_70523940_70913711	70906074	AAAAAAAA others(37): Show AAAAAAAAAAAAAAAAAATATATATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG02717.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0225 a0002c0002t0001g0225	1	229	0.0044	-44	c.37+ others(59): Show c.37+1635_37+1678delATATATATATATATATATATATATATATTT TTTTTTTTTTTTTT	TEX11	ENSG00000120498.14	transcript	ENST00000374333.7	protein_coding	2/29			chrX	TogoVar
TEX46_chr1_23005834_23020852	23017177	TTATATAT others(37): Show TTATATATATATATATATATATATATATATATATATATATATATA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01993.hp2 HG02080.hp1 HG01993.hp2 HG02080.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0025 a0001c0001t0001g0002 a0001c0001t0001g0025	2	434	0.0046	-44	c.-14 others(55): Show c.-1448_-1405delTATATATATATATATATATATATATATATATATA TATATATATA	TEX46	ENSG00000227868.7	transcript	ENST00000566855.4	protein_coding		1326		chr1	TogoVar
TFB1M_chr6_155251134_155319484	155305226	ATATATAT others(37): Show ATATATATTAAATTATATATTTATATATATATTAAATTATATATT	A A	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG00609.hp2 HG00621.hp2 others(83): Show HG00558.hp1 HG00609.hp2 HG00621.hp2 HG00639.hp2 HG00642.hp1 HG00673.hp2 HG01081.hp2 HG01099.hp1 HG01106.hp2 HG01168.hp2 HG01175.hp2 HG01192.hp2 HG01243.hp2 HG01255.hp1 HG01256.hp2 HG01258.hp2 HG01261.hp2 HG01358.hp2 HG01516.hp2 HG01517.hp2 HG01934.hp2 HG02040.hp2 HG02055.hp1 HG02071.hp2 HG02129.hp1 HG02129.hp2 HG02135.hp1 HG02135.hp2 HG02155.hp2 HG02165.hp2 HG02273.hp1 HG02300.hp1 HG02451.hp1 HG02523.hp1 HG02559.hp1 HG02572.hp2 HG02683.hp2 HG02886.hp2 HG02895.hp2 HG03195.hp1 HG03490.hp1 HG03492.hp2 HG03704.hp2 HG03831.hp2 HG03834.hp1 HG04115.hp1 HG04115.hp2 HG04199.hp1 HG04199.hp2 NA18939.hp1 NA18944.hp2 NA18952.hp2 NA18954.hp2 NA18955.hp1 NA18956.hp1 NA18957.hp2 NA18960.hp1 NA18970.hp2 NA18971.hp1 NA18973.hp1 NA18974.hp2 NA18975.hp1 NA18981.hp1 NA18987.hp1 NA18994.hp1 NA18998.hp2 NA19001.hp1 NA19002.hp2 NA19005.hp2 NA19007.hp2 NA19009.hp2 NA19010.hp2 NA19011.hp1 NA19012.hp1 NA19054.hp2 NA19055.hp2 NA19066.hp2 NA19067.hp1 NA19070.hp1 NA19074.hp1 NA19081.hp1 NA19082.hp1 NA19085.hp1 NA19090.hp1 NA20300.hp1 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0006 a0001c0001t0009 others(3): Show a0001c0001t0001 a0001c0001t0006 a0001c0001t0009 a0001c0001t0015 a0001c0001t0034 a0001c0002t0007	a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 others(76): Show a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0062 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0071 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0081 a0001c0001t0001g0084 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0095 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0112 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0133 a0001c0001t0001g0135 a0001c0001t0001g0138 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0218 a0001c0001t0006g0064 a0001c0001t0009g0085 a0001c0001t0009g0132 a0001c0001t0009g0156 a0001c0001t0009g0160 a0001c0001t0015g0063 a0001c0001t0015g0102 a0001c0001t0034g0154 a0001c0002t0007g0165	86	348	0.2471	-44	c.285 others(61): Show c.285+5918_285+5961delAATATATAATTTAATATATATATAAATA TATAATTTAATATATA	TFB1M	ENSG00000029639.11	transcript	ENST00000367166.5	protein_coding	2/6			chr6	TogoVar
TFDP1_chr13_113579753_113646473	113584001	GCACACAC others(37): Show GCACACACACGAGTGCACACACCAGTCCCCGCTCCCTCACATGCA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02717.hp2 HG02717.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0036 a0001c0001t0001g0036	1	348	0.0029	-44	c.-95 others(53): Show c.-951_-908delCACACACACGAGTGCACACACCAGTCCCCGCTCCCT CACATGCA	TFDP1	ENSG00000198176.13	transcript	ENST00000375370.10	protein_coding		751		chr13	TogoVar
TFDP1_chr13_113579753_113646473	113584043	GCACACAC others(37): Show GCACACACACGAGTGCACACACCAGTCCCCGCTCCCTCACATGCA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00621.hp2 HG03654.hp1 NA18944.hp2 others(2): Show HG00621.hp2 HG03654.hp1 NA18944.hp2 NA19064.hp1 NA19086.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0001 a0001c0002t0001g0297 a0001c0002t0001g0300 a0001c0002t0001g0001 a0001c0002t0001g0297 a0001c0002t0001g0300	5	348	0.0144	-44	c.-90 others(53): Show c.-909_-866delCACACACACGAGTGCACACACCAGTCCCCGCTCCCT CACATGCA	TFDP1	ENSG00000198176.13	transcript	ENST00000375370.10	protein_coding		709		chr13	TogoVar
THADA_chr2_43225851_43601038	43515050	TTTATATA others(37): Show TTTATATATAATATATTTTATATATAATATATATAAATATATATA	T T	intron_variant intron_variant	MODIFIER	HG00621.hp2 HG00621.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0187 a0002c0002t0001g0187	1	206	0.0049	-44	c.337 others(63): Show c.3375-6314_3375-6271delTATATATATTTATATATATTATATAT AAAATATATTATATATAA	THADA	ENSG00000115970.19	transcript	ENST00000405975.7	protein_coding	22/37			chr2	TogoVar
THBS2_chr6_169210785_169258846	169236088	CCCATCCA others(37): Show CCCATCCACACTCACTCCCCATCCACACTCATTCCCCCTTAAACA	C C	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02965.hp2 HG03471.hp1 HG02630.hp1 HG02965.hp2 HG03471.hp1	a0001 a0001	a0001c0014 a0001c0014	a0001c0014t0002 a0001c0014t0002	a0001c0014t0002g0027 a0001c0014t0002g0114 a0001c0014t0002g0027 a0001c0014t0002g0114	3	396	0.0076	-44	c.147 others(63): Show c.1477+1038_1477+1081delTGTTTAAGGGGGAATGAGTGTGGATG GGGAGTGAGTGTGGATGG	THBS2	ENSG00000186340.17	transcript	ENST00000617924.6	protein_coding	9/21			chr6	TogoVar
THBS2_chr6_169210785_169258846	169236408	ATAAACAC others(37): Show ATAAACACCATCCACACTCACTCCCCATCCACACTCATTGCCCCG	A A	intron_variant intron_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0003 a0003	a0003c0046 a0003c0046	a0003c0046t0021 a0003c0046t0021	a0003c0046t0021g0315 a0003c0046t0021g0315	1	396	0.0025	-44	c.147 others(61): Show c.1477+718_1477+761delCGGGGCAATGAGTGTGGATGGGGAGTGA GTGTGGATGGTGTTTA	THBS2	ENSG00000186340.17	transcript	ENST00000617924.6	protein_coding	9/21			chr6	TogoVar
THEMIS_chr6_127703200_127906058	127729140	TTCTCTCT others(37): Show TTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC	T T	intron_variant intron_variant	MODIFIER	HG02886.hp2 HG02886.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0180 a0001c0002t0001g0180	1	223	0.0045	-44	c.175 others(63): Show c.1759-9361_1759-9318delGAGAGAGAGAGAGAGAGAGAGAGAGA GAGAGAGAGAGAGAGAGA	THEMIS	ENSG00000172673.12	transcript	ENST00000368248.5	protein_coding	4/5			chr6	TogoVar
TIAM1_chr21_31113418_31349261	31210627	AAGAAAGA others(37): Show AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAG	A A	intron_variant intron_variant	MODIFIER	HG03130.hp1 HG03130.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0004	a0001c0002t0004g0105 a0001c0002t0004g0105	1	212	0.0047	-44	c.221 others(61): Show c.2218-456_2218-413delCTTTTTCTTTCTTTCTTTCTTTCTTTCT TTCTTTCTTTCTTTCT	TIAM1	ENSG00000156299.15	transcript	ENST00000541036.6	protein_coding	10/27			chr21	TogoVar
TIAM1_chr21_31113418_31349261	31210641	GAAAGAAA others(37): Show GAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAAGAAAGAAAGAA	G G	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00423.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0003 a0002c0003t0003	a0002c0003t0003g0018 a0002c0003t0003g0018	1	212	0.0047	-44	c.221 others(61): Show c.2218-470_2218-427delTTCTTTCTTTCTTTCTTTTTCTTTCTTT CTTTCTTTCTTTCTTT	TIAM1	ENSG00000156299.15	transcript	ENST00000541036.6	protein_coding	10/27			chr21	TogoVar
TIAM1_chr21_31113418_31349261	31210689	GAAAGAAA others(37): Show GAAAGAAAGAAAGAAAGAGAAAGAAAGAGAAAGAAAGAAAGAGAA	G G	intron_variant intron_variant	MODIFIER	HG01069.hp1 HG01069.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0010 a0002c0003t0010	a0002c0003t0010g0190 a0002c0003t0010g0190	1	212	0.0047	-44	c.221 others(61): Show c.2218-518_2218-475delTTCTCTTTCTTTCTTTCTCTTTCTTTCT CTTTCTTTCTTTCTTT	TIAM1	ENSG00000156299.15	transcript	ENST00000541036.6	protein_coding	10/27			chr21	TogoVar
TIFAB_chr5_135439226_135457351	135445894	ACCTTAAA others(37): Show ACCTTAAAGGGCAAGGAGATGATTTCTAGATTTCCAGACAATGTC	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA18997.hp2 NA18997.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0049 a0001c0001t0049	a0001c0001t0049g0071 a0001c0001t0049g0071	1	456	0.0022	-44	c.35 others(55): Show c.3516_*3559delGACATTGTCTGGAAATCTAGAAATCATCTCCTTG CCCTTTAAGG	TIFAB	ENSG00000255833.2	transcript	ENST00000537858.2	protein_coding	2/2	3516		chr5	TogoVar
TIMM22_chr17_992129_1008671	993368	CCTCACAT others(37): Show CCTCACATAATCCACCCTCACATAATCCACCCCTCACATAATCCA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02615.hp2 HG02717.hp1 HG03927.hp2 others(11): Show HG02615.hp2 HG02717.hp1 HG03927.hp2 HG04199.hp2 NA18941.hp1 NA18942.hp2 NA18971.hp2 NA18977.hp2 NA18998.hp1 NA19000.hp2 NA19005.hp2 NA19009.hp1 NA19065.hp1 NA19087.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0013 a0001c0001t0024 others(1): Show a0001c0001t0007 a0001c0001t0013 a0001c0001t0024 a0001c0001t0038	a0001c0001t0007g0012 a0001c0001t0007g0062 a0001c0001t0013g0001 others(3): Show a0001c0001t0007g0012 a0001c0001t0007g0062 a0001c0001t0013g0001 a0001c0001t0013g0061 a0001c0001t0024g0041 a0001c0001t0038g0012	14	439	0.0319	-44	c.-37 others(55): Show c.-3774_-3731delCTCACATAATCCACCCTCACATAATCCACCCCTC ACATAATCCA	TIMM22	ENSG00000177370.5	transcript	ENST00000327158.5	protein_coding		3760		chr17	TogoVar
TINAGL1_chr1_31571515_31592686	31580193	CTCTCTCT others(37): Show CTCTCTCTCTCTCTCTCTCTGTCTCTCTCTCTCTGTCTCTCTCTG	C C	intron_variant intron_variant	MODIFIER	NA19077.hp1 NA19077.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0087 a0001c0001t0002g0087	1	440	0.0023	-44	c.374 others(59): Show c.374+940_374+983delCTCTCTGTCTCTCTCTCTCTGTCTCTCTCT GTCTCTCTCTCTCT	TINAGL1	ENSG00000142910.16	transcript	ENST00000271064.12	protein_coding	3/11		INFO_REALIGN_3_PRIME	chr1	TogoVar
TLL1_chr4_165868237_166109457	166052915	AACCCTGA others(37): Show AACCCTGATTTTGAAGGGATTAAATTAAAGACTGAGATAAGAGGT	A A	intron_variant intron_variant	MODIFIER	NA18906.hp2 NA18906.hp2	a0003 a0003	a0003c0008 a0003c0008	a0003c0008t0034 a0003c0008t0034	a0003c0008t0034g0023 a0003c0008t0034g0023	1	250	0.0040	-44	c.152 others(63): Show c.1525-2160_1525-2117delACCCTGATTTTGAAGGGATTAAATTA AAGACTGAGATAAGAGGT	TLL1	ENSG00000038295.8	transcript	ENST00000061240.7	protein_coding	12/20			chr4	TogoVar
TLN2_chr15_62385550_62849631	62562906	TCACACAC others(37): Show TCACACACACACACACACACACACACACACACACACACACACACA	T T	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG01167.hp1	a0001 a0001	a0001c0054 a0001c0054	a0001c0054t0001 a0001c0054t0001	a0001c0054t0001g0015 a0001c0054t0001g0015	1	144	0.0069	-44	c.-23 others(65): Show c.-237-26759_-237-26716delACACACACACACACACACACACAC ACACACACACACACACACAC	TLN2	ENSG00000171914.17	transcript	ENST00000636159.2	protein_coding	1/58		INFO_REALIGN_3_PRIME	chr15	TogoVar
TMC5_chr16_19412883_19504113	19465029	TTCTTTCT others(37): Show TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTCCTTCCTTCCTTCC	T T	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00639.hp2 HG00733.hp1 others(25): Show HG00280.hp2 HG00639.hp2 HG00733.hp1 HG00738.hp2 HG00741.hp2 HG01074.hp1 HG01081.hp2 HG01123.hp1 HG01175.hp1 HG01255.hp2 HG01358.hp1 HG01433.hp1 HG02071.hp1 HG02148.hp1 HG02300.hp2 HG02523.hp2 HG02602.hp1 HG03017.hp1 HG03492.hp1 HG03834.hp1 HG03942.hp1 NA18964.hp1 NA18999.hp1 NA19005.hp1 NA19010.hp1 NA19074.hp1 NA19084.hp1 NA20752.hp1	a0001 a0007 a0013 a0001 a0007 a0013	a0001c0001 a0001c0007 a0007c0010 others(1): Show a0001c0001 a0001c0007 a0007c0010 a0013c0018	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0007t0001 a0007c0010t0001 a0013c0018t0001	a0001c0001t0001g0045 a0001c0001t0001g0130 a0001c0001t0001g0176 others(25): Show a0001c0001t0001g0045 a0001c0001t0001g0130 a0001c0001t0001g0176 a0001c0001t0001g0221 a0001c0001t0001g0233 a0001c0001t0001g0234 a0001c0001t0001g0235 a0001c0001t0001g0245 a0001c0001t0001g0246 a0001c0001t0001g0260 a0001c0001t0001g0262 a0001c0001t0001g0265 a0001c0001t0001g0271 a0001c0001t0001g0274 a0001c0001t0001g0300 a0001c0001t0001g0301 a0001c0001t0001g0315 a0001c0001t0002g0296 a0001c0001t0003g0129 a0001c0001t0004g0238 a0001c0001t0004g0239 a0001c0001t0004g0240 a0001c0001t0004g0263 a0001c0001t0005g0196 a0001c0007t0001g0013 a0001c0007t0001g0069 a0007c0010t0001g0294 a0013c0018t0001g0269	28	336	0.0833	-44	c.148 others(63): Show c.1485+1007_1486-1008delCTTTCTTTCTTTCTTTCTTTCTTTCT TTTCCTTCCTTCCTTCCT	TMC5	ENSG00000103534.17	transcript	ENST00000542583.7	protein_coding	8/21		INFO_REALIGN_3_PRIME	chr16	TogoVar
TMC5_chr16_19412883_19504113	19465033	TTCTTTCT others(37): Show TTCTTTCTTTCTTTCTTTCTTTCTTTTCCTTCCTTCCTTCCTTCC	T T	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG02109.hp1 HG02451.hp1 others(10): Show HG00323.hp2 HG02109.hp1 HG02451.hp1 HG02897.hp2 HG02922.hp2 HG02965.hp1 HG02970.hp2 HG03195.hp2 HG03654.hp1 HG04184.hp1 HG06807.hp1 NA18906.hp1 NA19009.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0005 a0001c0001t0007 others(2): Show a0001c0001t0002 a0001c0001t0005 a0001c0001t0007 a0001c0001t0012 a0001c0001t0016	a0001c0001t0002g0136 a0001c0001t0002g0316 a0001c0001t0005g0286 others(10): Show a0001c0001t0002g0136 a0001c0001t0002g0316 a0001c0001t0005g0286 a0001c0001t0007g0054 a0001c0001t0007g0056 a0001c0001t0007g0057 a0001c0001t0007g0058 a0001c0001t0012g0131 a0001c0001t0012g0132 a0001c0001t0012g0270 a0001c0001t0016g0092 a0001c0001t0016g0093 a0001c0001t0016g0094	13	336	0.0387	-44	c.148 others(63): Show c.1485+1011_1486-1004delCTTTCTTTCTTTCTTTCTTTCTTTTC CTTCCTTCCTTCCTTCCT	TMC5	ENSG00000103534.17	transcript	ENST00000542583.7	protein_coding	8/21		INFO_REALIGN_3_PRIME	chr16	TogoVar
TMC5_chr16_19412883_19504113	19465037	TTCTTTCT others(37): Show TTCTTTCTTTCTTTCTTTCTTTTCCTTCCTTCCTTCCTTCCTTCC	T T	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG01257.hp2 HG01258.hp1 others(4): Show HG01255.hp1 HG01257.hp2 HG01258.hp1 HG01433.hp2 HG01943.hp2 HG01978.hp1 HG02080.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0153 a0001c0001t0002g0149 a0001c0001t0002g0151 others(4): Show a0001c0001t0001g0153 a0001c0001t0002g0149 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0154 a0001c0001t0002g0155 a0001c0001t0002g0156	7	336	0.0208	-44	c.148 others(63): Show c.1485+1015_1486-1000delCTTTCTTTCTTTCTTTCTTTTCCTTC CTTCCTTCCTTCCTTCCT	TMC5	ENSG00000103534.17	transcript	ENST00000542583.7	protein_coding	8/21		INFO_REALIGN_3_PRIME	chr16	TogoVar
TMC5_chr16_19412883_19504113	19465041	TTCTTTCT others(37): Show TTCTTTCTTTCTTTCTTTTCCTTCCTTCCTTCCTTCCTTCCTTCC	T T	intron_variant intron_variant	MODIFIER	HG02572.hp2 NA19043.hp1 HG02572.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0037 a0001c0001t0004g0061 a0001c0001t0004g0037 a0001c0001t0004g0061	2	336	0.0060	-44	c.148 others(62): Show c.1485+1019_1486-996delCTTTCTTTCTTTCTTTTCCTTCCTTCC TTCCTTCCTTCCTTCCT	TMC5	ENSG00000103534.17	transcript	ENST00000542583.7	protein_coding	8/21		INFO_REALIGN_3_PRIME	chr16	TogoVar
TMC5_chr16_19412883_19504113	19465045	TTCTTTCT others(37): Show TTCTTTCTTTCTTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC	T T	intron_variant intron_variant	MODIFIER	HG01175.hp2 HG01891.hp2 HG02723.hp2 HG01175.hp2 HG01891.hp2 HG02723.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0083 a0001c0001t0004g0091 a0001c0001t0004g0105 a0001c0001t0004g0083 a0001c0001t0004g0091 a0001c0001t0004g0105	3	336	0.0089	-44	c.148 others(62): Show c.1485+1023_1486-992delCTTTCTTTCTTTTCCTTCCTTCCTTCC TTCCTTCCTTCCTTCCT	TMC5	ENSG00000103534.17	transcript	ENST00000542583.7	protein_coding	8/21		INFO_REALIGN_3_PRIME	chr16	TogoVar
TMEM141_chr9_136786344_136798317	136792999	CCCCAACC others(37): Show CCCCAACCTGGGACCTGCCCAGGAGGTTGGAGCAGAAAGGGCTCT	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00099.hp1 HG00438.hp1 HG00558.hp1 others(43): Show HG00099.hp1 HG00438.hp1 HG00558.hp1 HG01884.hp2 HG01891.hp2 HG02027.hp2 HG02040.hp2 HG02080.hp2 HG02083.hp1 HG02132.hp1 HG02280.hp1 HG02572.hp1 HG02818.hp1 HG02886.hp1 HG03225.hp2 HG03453.hp1 HG03471.hp1 HG03540.hp1 HG03704.hp1 HG03831.hp2 NA18612.hp2 NA18906.hp1 NA18956.hp2 NA18957.hp1 NA18959.hp1 NA18960.hp2 NA18963.hp1 NA18964.hp2 NA18968.hp2 NA18973.hp1 NA18977.hp2 NA18979.hp1 NA18983.hp2 NA18985.hp1 NA18994.hp2 NA19002.hp2 NA19011.hp1 NA19054.hp1 NA19055.hp2 NA19058.hp1 NA19060.hp2 NA19070.hp2 NA19078.hp2 NA19080.hp2 NA19086.hp1 NA19087.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0002 a0001c0001t0003	a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0010 others(2): Show a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0010 a0001c0001t0002g0013 a0001c0001t0003g0003	46	388	0.1186	-44	c.17 others(53): Show c.171_*214delAACCTGGGACCTGCCCAGGAGGTTGGAGCAGAAAGG GCTCTCCC	TMEM141	ENSG00000244187.8	transcript	ENST00000290079.9	protein_coding	5/5	171	INFO_REALIGN_3_PRIME	chr9	TogoVar
TMEM143_chr19_48327356_48368940	48334410	TTTTCTCT others(37): Show TTTTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	T T	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01071.hp1 HG01070.hp1 HG01071.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0011 a0001c0003t0011	a0001c0003t0011g0049 a0001c0003t0011g0050 a0001c0003t0011g0049 a0001c0003t0011g0050	2	350	0.0057	-44	c.976 others(59): Show c.976-257_976-214delGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA AAGAAAGAGAGAAA	TMEM143	ENSG00000161558.11	transcript	ENST00000293261.8	protein_coding	6/7			chr19	TogoVar
TMEM143_chr19_48327356_48368940	48334416	CTCTTTCT others(37): Show CTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT	C C	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02965.hp1 NA19030.hp2 HG02258.hp1 HG02965.hp1 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0005 a0001c0002t0005 a0001c0001t0005 a0001c0002t0005	a0001c0001t0005g0307 a0001c0001t0005g0308 a0001c0002t0005g0069 a0001c0001t0005g0307 a0001c0001t0005g0308 a0001c0002t0005g0069	3	350	0.0086	-44	c.976 others(59): Show c.976-263_976-220delAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA GAAAGAAAGAAAGA	TMEM143	ENSG00000161558.11	transcript	ENST00000293261.8	protein_coding	6/7			chr19	TogoVar
TMEM163_chr2_134450759_134724000	134633966	CATATATA others(37): Show CATATATATATATATATATATATATATATATATATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG02965.hp1 NA18522.hp1 HG02965.hp1 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0005 a0001c0001t0002 a0001c0001t0005	a0001c0001t0002g0191 a0001c0001t0005g0218 a0001c0001t0002g0191 a0001c0001t0005g0218	2	222	0.0090	-44	c.322 others(63): Show c.322+79190_322+79233delATATATATATATATATATATATATAT ATATATATATATATATAT	TMEM163	ENSG00000152128.13	transcript	ENST00000281924.6	protein_coding	2/7			chr2	TogoVar
TMEM181_chr6_158555091_158640429	158571331	TGTGATCC others(37): Show TGTGATCCGCCCACCTTGGCCTCCCAAAGTGCTGGGATTATAGGC	T T	intron_variant intron_variant	MODIFIER	NA18747.hp1 NA18943.hp2 NA18747.hp1 NA18943.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0018 a0001c0001t0001 a0001c0001t0018	a0001c0001t0001g0276 a0001c0001t0018g0277 a0001c0001t0001g0276 a0001c0001t0018g0277	2	334	0.0060	-44	c.9-2 others(57): Show c.9-2082_9-2039delCGCCCACCTTGGCCTCCCAAAGTGCTGGGATT ATAGGCGTGATC	TMEM181	ENSG00000146433.10	transcript	ENST00000684151.1	protein_coding	1/16		INFO_REALIGN_3_PRIME	chr6	TogoVar
TMEM185A_chrX_149591556_149636792	149605414	ACTTTCTA others(37): Show ACTTTCTATGGCCTCCCATGTCACTATGGCCTCCCATGTCACTTT	A A	intron_variant intron_variant	MODIFIER	HG02056.hp1 HG02129.hp1 HG02056.hp1 HG02129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0036 a0001c0001t0012 a0001c0001t0036	a0001c0001t0012g0186 a0001c0001t0036g0202 a0001c0001t0012g0186 a0001c0001t0036g0202	2	259	0.0077	-44	c.424 others(61): Show c.424-1388_424-1345delAAAGTGACATGGGAGGCCATAGTGACAT GGGAGGCCATAGAAAG	TMEM185A	ENSG00000269556.9	transcript	ENST00000600449.8	protein_coding	3/6			chrX	TogoVar
TMEM185A_chrX_149591556_149636792	149605471	TTGTCACT others(37): Show TTGTCACTTTCTATGGCCTCCCATGTCACTTTCTATGGCCTCCCA	T T	intron_variant intron_variant	MODIFIER	HG02683.hp1 HG02683.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0151 a0001c0001t0003g0151	1	259	0.0039	-44	c.424 others(61): Show c.424-1445_424-1402delTGGGAGGCCATAGAAAGTGACATGGGAG GCCATAGAAAGTGACA	TMEM185A	ENSG00000269556.9	transcript	ENST00000600449.8	protein_coding	3/6			chrX	TogoVar
TMEM185A_chrX_149591556_149636792	149605507	GGCCTCCC others(37): Show GGCCTCCCATGTCACTTTCTATGGCCTCCCATGTCACTTTCTATA	G G	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02723.hp2 HG02809.hp1 others(3): Show HG01884.hp2 HG02723.hp2 HG02809.hp1 HG03130.hp1 HG03195.hp2 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0015 a0001c0001t0043 a0001c0001t0047 a0001c0001t0015 a0001c0001t0043 a0001c0001t0047	a0001c0001t0015g0004 a0001c0001t0043g0040 a0001c0001t0047g0039 a0001c0001t0015g0004 a0001c0001t0043g0040 a0001c0001t0047g0039	6	259	0.0232	-44	c.424 others(61): Show c.424-1481_424-1438delTATAGAAAGTGACATGGGAGGCCATAGA AAGTGACATGGGAGGC	TMEM185A	ENSG00000269556.9	transcript	ENST00000600449.8	protein_coding	3/6			chrX	TogoVar
TMEM209_chr7_130159713_130210406	130205511	GGGGTCGC others(37): Show GGGGTCGCAGGCCCAGGCGCTCGGAGCGTTACCAGGGAAACAGGT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01167.hp2 HG01167.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0146 a0001c0001t0003g0146	1	336	0.0030	-44	c.-18 others(53): Show c.-180_-137delACCTGTTTCCCTGGTAACGCTCCGAGCGCCTGGGCC TGCGACCC	TMEM209	ENSG00000146842.17	transcript	ENST00000397622.7	protein_coding		106		chr7	TogoVar
TMEM232_chr5_110414496_110731671	110524387	GAAAGAAA others(37): Show GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGA	G G	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG02818.hp1 HG03471.hp2 HG00735.hp2 HG02818.hp1 HG03471.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0003 a0003c0004t0003	a0003c0004t0003g0244 a0003c0004t0003g0248 a0003c0004t0003g0249 a0003c0004t0003g0244 a0003c0004t0003g0248 a0003c0004t0003g0249	3	250	0.0120	-44	c.170 others(63): Show c.1703+4157_1703+4200delTCTTTTCTTTTCTTTTCTTTCTTTCT TTCTTTCTTTCTTTCTTT	TMEM232	ENSG00000186952.15	transcript	ENST00000455884.7	protein_coding	12/13			chr5	TogoVar
TMEM235_chr17_78226631_78245987	78235923	CAACCAGA others(37): Show CAACCAGATCTCAGAACTCACTCACTATCCAGAGAACAGCACCAA	C C	intron_variant intron_variant	MODIFIER	NA18987.hp2 NA18987.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0006 a0001c0002t0006	a0001c0002t0006g0178 a0001c0002t0006g0178	1	468	0.0021	-44	c.409 others(61): Show c.409+1194_409+1237delAACCAGATCTCAGAACTCACTCACTATC CAGAGAACAGCACCAA	TMEM235	ENSG00000204278.14	transcript	ENST00000421688.7	protein_coding	3/4			chr17	TogoVar
TMEM239_chr20_2811364_2823062	2820295	CGTAATTC others(37): Show CGTAATTCCTGAAATTCCTTTAAAAGTAGAAAAAGAAGTCCATTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19065.hp2 NA19065.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	400	0.0025	-44	c.32 others(55): Show c.3283_*3326delGTAATTCCTGAAATTCCTTTAAAAGTAGAAAAAG AAGTCCATTT	TMEM239	ENSG00000198326.10	transcript	ENST00000380585.2	protein_coding		2234		chr20	TogoVar
TMEM70_chr8_73971195_73987783	73976049	AGGCGGCA others(37): Show AGGCGGCAGGCGGGCGGCAGGCGGGCGGCAGGCGGGCGGCAGGCG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02572.hp2 HG02572.hp2	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0002 a0004c0004t0002	a0004c0004t0002g0029 a0004c0004t0002g0029	1	402	0.0025	-44	c.-23 others(53): Show c.-232_-189delGGCGGCAGGCGGGCGGCAGGCGGGCGGCAGGCGGGC GGCAGGCG	TMEM70	ENSG00000175606.11	transcript	ENST00000312184.6	protein_coding		145		chr8	TogoVar
TMPRSS12_chr12_50837926_50892884	50881976	AAAAAAAA others(37): Show AAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG03239.hp2 HG03239.hp2	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0004 a0001c0007t0004	a0001c0007t0004g0272 a0001c0007t0004g0272	1	390	0.0026	-44	c.653 others(61): Show c.653-3268_653-3225delAAAAAAAAAAAAAAAAAAAAAATATATA TATATATATATATATA	TMPRSS12	ENSG00000186452.11	transcript	ENST00000398458.4	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr12	TogoVar
TMPRSS2_chr21_41459305_41513158	41475046	GGTGAGGT others(37): Show GGTGAGGTGGTGGGTGAGGGGGTGAAGGGGTGAGTGAGGGGGTGA	G G	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG01168.hp1 HG01433.hp2 others(18): Show HG01069.hp2 HG01168.hp1 HG01433.hp2 HG01891.hp1 HG01934.hp2 HG02129.hp2 HG02683.hp2 HG03654.hp2 HG03704.hp2 HG04115.hp1 NA18906.hp2 NA18952.hp1 NA18953.hp2 NA18961.hp2 NA18970.hp2 NA18974.hp2 NA18983.hp2 NA18995.hp2 NA19007.hp2 NA19060.hp1 NA19082.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0002t0006 others(1): Show a0001c0001t0001 a0001c0002t0001 a0001c0002t0006 a0001c0002t0008	a0001c0001t0001g0001 a0001c0001t0001g0023 a0001c0001t0001g0024 others(16): Show a0001c0001t0001g0001 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0109 a0001c0001t0001g0128 a0001c0001t0001g0139 a0001c0001t0001g0142 a0001c0001t0001g0179 a0001c0001t0001g0181 a0001c0001t0001g0239 a0001c0001t0001g0354 a0001c0001t0001g0367 a0001c0002t0001g0140 a0001c0002t0006g0373 a0001c0002t0008g0271 a0001c0002t0008g0298 a0001c0002t0008g0303 a0001c0002t0008g0304 a0001c0002t0008g0316	21	382	0.0550	-44	c.727 others(61): Show c.727+1487_727+1530delTCACCCCCTCACTCACCCCTTCACCCCC TCACCCACCACCTCAC	TMPRSS2	ENSG00000184012.14	transcript	ENST00000332149.10	protein_coding	8/13			chr21	TogoVar
TMPRSS5_chr11_113682550_113711308	113686209	CTCACAAA others(37): Show CTCACAAAGTTCTGTTATTGCTAAACACTAGTTGCATTTCCTTGG	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18961.hp1 NA18961.hp1	a0009 a0009	a0009c0013 a0009c0013	a0009c0013t0009 a0009c0013t0009	a0009c0013t0009g0249 a0009c0013t0009g0249	1	426	0.0024	-44	c.20 others(55): Show c.2007_*2050delCCAAGGAAATGCAACTAGTGTTTAGCAATAACAG AACTTTGTGA	TMPRSS5	ENSG00000166682.13	transcript	ENST00000299882.11	protein_coding		1340		chr11	TogoVar
TMTC2_chr12_82681906_83139866	82937757	TATATATA others(37): Show TATATATATATATATATATATATATATATATATATATATACACAC	T T	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG01243.hp1 HG01978.hp2 others(3): Show HG00323.hp2 HG01243.hp1 HG01978.hp2 HG01993.hp1 HG03225.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0005 a0001c0001t0006 others(2): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0006 a0001c0001t0008 a0001c0001t0025	a0001c0001t0001g0064 a0001c0001t0001g0091 a0001c0001t0005g0044 others(3): Show a0001c0001t0001g0064 a0001c0001t0001g0091 a0001c0001t0005g0044 a0001c0001t0006g0072 a0001c0001t0008g0075 a0001c0001t0025g0010	6	96	0.0625	-44	c.159 others(63): Show c.1598+7224_1598+7267delTATATATATATATATATATATATATA TACACACATATATATATA	TMTC2	ENSG00000179104.9	transcript	ENST00000321196.8	protein_coding	4/11		INFO_REALIGN_3_PRIME	chr12	TogoVar
TNC_chr9_115014575_115123157	115069690	CCCTCCCT others(37): Show CCCTCCCTCCCTCCCTCCCTTCCTTCCTTCCTTCCTTCCTCCCTT	C C	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG02257.hp1 HG02257.hp2 others(1): Show HG00738.hp1 HG02257.hp1 HG02257.hp2 HG03453.hp1	a0004 a0034 a0049 others(1): Show a0004 a0034 a0049 a0055	a0004c0075 a0034c0060 a0049c0064 others(1): Show a0004c0075 a0034c0060 a0049c0064 a0055c0079	a0004c0075t0004 a0034c0060t0014 a0049c0064t0014 others(1): Show a0004c0075t0004 a0034c0060t0014 a0049c0064t0014 a0055c0079t0023	a0004c0075t0004g0266 a0034c0060t0014g0253 a0049c0064t0014g0343 others(1): Show a0004c0075t0004g0266 a0034c0060t0014g0253 a0049c0064t0014g0343 a0055c0079t0023g0194	4	366	0.0109	-44	c.321 others(63): Show c.3214+3869_3214+3912delAAGGGAGGAAGGAAGGAAGGAAGGAA GGGAGGGAGGGAGGGAGG	TNC	ENSG00000041982.17	transcript	ENST00000350763.9	protein_coding	10/27			chr9	TogoVar
TNC_chr9_115014575_115123157	115069710	TCCTTCCT others(37): Show TCCTTCCTTCCTTCCTTCCTCCCTTCCTCCCTCCCTCCCTCCCTC	T T	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG02280.hp1 HG03516.hp2 HG01243.hp2 HG02280.hp1 HG03516.hp2	a0005 a0009 a0005 a0009	a0005c0034 a0005c0067 a0009c0092 a0005c0034 a0005c0067 a0009c0092	a0005c0034t0002 a0005c0067t0002 a0009c0092t0002 a0005c0034t0002 a0005c0067t0002 a0009c0092t0002	a0005c0034t0002g0197 a0005c0067t0002g0359 a0009c0092t0002g0093 a0005c0034t0002g0197 a0005c0067t0002g0359 a0009c0092t0002g0093	3	366	0.0082	-44	c.321 others(63): Show c.3214+3849_3214+3892delGAGGGAGGGAGGGAGGGAGGAAGGGA GGAAGGAAGGAAGGAAGG	TNC	ENSG00000041982.17	transcript	ENST00000350763.9	protein_coding	10/27			chr9	TogoVar
TNFAIP1_chr17_28330761_28352009	28351498	CACTGTCT others(37): Show CACTGTCTAGAGGCTACTCAACCCCACCCAACACATGCCACCACT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01255.hp1 HG01255.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	1	340	0.0029	-44	c.68 others(55): Show c.6899_*6942delACTGTCTAGAGGCTACTCAACCCCACCCAACACA TGCCACCACT	TNFAIP1	ENSG00000109079.10	transcript	ENST00000226225.7	protein_coding		4490		chr17	TogoVar
TNK2_chr3_195858364_195913551	195874713	CTCCCTCG others(37): Show CTCCCTCGGGATGGCGCCCACGCACGCTCCGAGGCACAGGAAGCT	C C	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00140.hp1 HG00639.hp1 others(50): Show HG00099.hp1 HG00140.hp1 HG00639.hp1 HG00735.hp2 HG00741.hp2 HG01069.hp2 HG01071.hp1 HG01167.hp1 HG01175.hp2 HG01243.hp1 HG01255.hp1 HG01256.hp1 HG01261.hp2 HG01346.hp2 HG01358.hp2 HG01433.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp2 HG02155.hp1 HG02451.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02683.hp1 HG02735.hp1 HG02818.hp1 HG02922.hp2 HG03130.hp2 HG03195.hp1 HG03195.hp2 HG03471.hp2 HG03490.hp2 HG03540.hp2 HG03688.hp2 HG03834.hp2 HG06807.hp2 NA18940.hp1 NA18949.hp2 NA18957.hp1 NA18961.hp1 NA18963.hp2 NA18986.hp2 NA19030.hp2 NA19043.hp2 NA19058.hp2 NA19066.hp1 NA19070.hp1 NA19074.hp1 NA20805.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0013 a0017 a0021	a0001c0001 a0001c0002 a0001c0006 others(22): Show a0001c0001 a0001c0002 a0001c0006 a0001c0011 a0001c0012 a0001c0014 a0001c0031 a0001c0058 a0001c0061 a0001c0062 a0002c0010 a0002c0026 a0002c0057 a0002c0060 a0002c0067 a0002c0068 a0002c0072 a0002c0073 a0002c0074 a0003c0005 a0003c0015 a0003c0030 a0013c0076 a0017c0035 a0021c0075	a0001c0001t0001 a0001c0002t0001 a0001c0006t0001 others(25): Show a0001c0001t0001 a0001c0002t0001 a0001c0006t0001 a0001c0006t0012 a0001c0011t0001 a0001c0012t0001 a0001c0012t0011 a0001c0014t0004 a0001c0031t0001 a0001c0058t0004 a0001c0061t0001 a0001c0062t0001 a0002c0010t0001 a0002c0026t0001 a0002c0026t0009 a0002c0057t0004 a0002c0060t0001 a0002c0067t0001 a0002c0068t0001 a0002c0072t0001 a0002c0073t0001 a0002c0074t0001 a0003c0005t0001 a0003c0015t0001 a0003c0030t0001 a0013c0076t0001 a0017c0035t0004 a0021c0075t0001	a0001c0001t0001g0290 a0001c0002t0001g0052 a0001c0006t0001g0061 others(49): Show a0001c0001t0001g0290 a0001c0002t0001g0052 a0001c0006t0001g0061 a0001c0006t0001g0066 a0001c0006t0001g0069 a0001c0006t0001g0070 a0001c0006t0001g0077 a0001c0006t0001g0083 a0001c0006t0001g0087 a0001c0006t0001g0092 a0001c0006t0001g0097 a0001c0006t0001g0098 a0001c0006t0001g0100 a0001c0006t0001g0229 a0001c0006t0012g0065 a0001c0011t0001g0060 a0001c0011t0001g0081 a0001c0011t0001g0107 a0001c0011t0001g0108 a0001c0011t0001g0231 a0001c0012t0001g0067 a0001c0012t0001g0071 a0001c0012t0001g0075 a0001c0012t0001g0085 a0001c0012t0001g0088 a0001c0012t0011g0102 a0001c0014t0004g0002 a0001c0031t0001g0089 a0001c0031t0001g0090 a0001c0058t0004g0237 a0001c0061t0001g0238 a0001c0062t0001g0239 a0002c0010t0001g0053 a0002c0026t0001g0074 a0002c0026t0009g0099 a0002c0057t0004g0236 a0002c0060t0001g0240 a0002c0067t0001g0082 a0002c0068t0001g0063 a0002c0072t0001g0091 a0002c0073t0001g0068 a0002c0074t0001g0073 a0003c0005t0001g0051 a0003c0005t0001g0054 a0003c0015t0001g0020 a0003c0015t0001g0064 a0003c0015t0001g0080 a0003c0015t0001g0084 a0003c0030t0001g0072 a0013c0076t0001g0078 a0017c0035t0004g0233 a0021c0075t0001g0079	53	372	0.1425	-44	c.125 others(63): Show c.1257-2287_1257-2244delAGCTTCCTGTGCCTCGGAGCGTGCGT GGGCGCCATCCCGAGGGA	TNK2	ENSG00000061938.21	transcript	ENST00000672887.2	protein_coding	9/15			chr3	TogoVar
TNK2_chr3_195858364_195913551	195874782	GCTCCGAG others(37): Show GCTCCGAGGCACAGGAAGCTCCCCTCGGGATGGCGCCCACGCACA	G G	intron_variant intron_variant	MODIFIER	NA19030.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0103 a0001c0001t0001g0103	1	372	0.0027	-44	c.125 others(63): Show c.1257-2356_1257-2313delTGTGCGTGGGCGCCATCCCGAGGGGA GCTTCCTGTGCCTCGGAG	TNK2	ENSG00000061938.21	transcript	ENST00000672887.2	protein_coding	9/15			chr3	TogoVar

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