Joint Open Genome and Omics Platform (JoGo)

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view	regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	external
	ZNF709_chr19_12456184_12489816	12467918	ATCCGGGA others(39): Show ATCCGGGAGGGAGGTGGGGGTCAGCCCCCGCACGGCCAGCCGCCCCG	A A	intron_variant intron_variant	MODIFIER	HG01981.hp1 HG02559.hp1 HG02895.hp2 others(11): Show HG01981.hp1 HG02559.hp1 HG02895.hp2 HG02896.hp1 HG02897.hp1 HG03139.hp2 HG03540.hp1 HG03579.hp2 NA18970.hp1 NA18974.hp1 NA18994.hp2 NA19063.hp2 NA19086.hp2 NA19088.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0001 a0001c0001t0013 a0001c0002t0004 others(1): Show a0001c0001t0001 a0001c0001t0013 a0001c0002t0004 a0001c0003t0027	a0001c0001t0001g0147 a0001c0001t0001g0156 a0001c0001t0001g0181 others(6): Show a0001c0001t0001g0147 a0001c0001t0001g0156 a0001c0001t0001g0181 a0001c0001t0001g0192 a0001c0001t0001g0207 a0001c0001t0013g0182 a0001c0002t0004g0009 a0001c0002t0004g0095 a0001c0003t0027g0209	14	358	0.0391	-46	c.4-1 others(59): Show c.4-1114_4-1069delCGGGGCGGCTGGCCGTGCGGGGGCTGACCCCC ACCTCCCTCCCGGA		ZNF709	ENSG00000242852.7	transcript	ENST00000397732.8	protein_coding	1/3						chr19	TogoVar
	ZNF709_chr19_12456184_12489816	12481006	ACTCCTGG others(39): Show ACTCCTGGGCTCAAGCAATCCACCTGCCTCAGCCTCCCAAAGTGCTG	A A	intron_variant intron_variant	MODIFIER	HG04184.hp1 HG04184.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0047 a0001c0001t0001g0047	1	358	0.0028	-46	c.3+3 others(59): Show c.3+3603_3+3648delCAGCACTTTGGGAGGCTGAGGCAGGTGGATTG CTTGAGCCCAGGAG		ZNF709	ENSG00000242852.7	transcript	ENST00000397732.8	protein_coding	1/3						chr19	TogoVar
	ZNF713_chr7_55882456_55947225	55887764	GGGGCGGA others(39): Show GGGGCGGAGGCGGGGGGCGGAGGCGGGGGGCGGAGGCGGGGGGCGGC	G G	intron_variant intron_variant	MODIFIER	HG02148.hp1 HG02148.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0012 a0001c0001t0012	a0001c0001t0012g0071 a0001c0001t0012g0071	1	383	0.0026	-46	c.-58 others(62): Show c.-583+91_-583+136delAGGCGGGGGGCGGAGGCGGGGGGCGGAGG CGGGGGGCGGCGGGCGG		ZNF713	ENSG00000178665.16	transcript	ENST00000429591.4	protein_coding	1/6					INFO_REALIGN_3_PRIME	chr7	TogoVar
	ZNF732_chr4_265675_310474	299372	TATATATA others(39): Show TATATATATATACACATATGTACACATATGTGTATATATATATACAC	T T	intron_variant intron_variant	MODIFIER	HG03540.hp2 HG03540.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0190 a0001c0001t0001g0190	1	324	0.0031	-46	c.4-3 others(59): Show c.4-3263_4-3218delGTGTATATATATATACACATATGTGTACATAT GTGTATATATATAT		ZNF732	ENSG00000186777.13	transcript	ENST00000419098.6	protein_coding	1/3						chr4	TogoVar
	ZNF771_chr16_30402606_30424414	30415947	GCCTCTTA others(39): Show GCCTCTTAGAAGGCATTTCTTTCCTTTTTCTGATTTTTATCTCTAAA	G G	intron_variant intron_variant	MODIFIER	NA19063.hp2 NA19063.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0105 a0001c0001t0001g0105	1	326	0.0031	-46	c.142 others(63): Show c.142-1607_142-1562delCCTCTTAGAAGGCATTTCTTTCCTTTTT CTGATTTTTATCTCTAAA		ZNF771	ENSG00000179965.12	transcript	ENST00000319296.10	protein_coding	2/2						chr16	TogoVar
	ZNF773_chr19_57494938_57513229	57511020	CAAAACAA others(39): Show CAAAACAATTTTATTTATTTTATTTTATTTTATTTATTTTTTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01081.hp1 HG01081.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0039 a0001c0001t0009g0039	1	414	0.0024	-46	c.35 others(57): Show c.3597_*3642delAAAACAATTTTATTTATTTTATTTTATTTTATTT ATTTTTTTTTTT		ZNF773	ENSG00000152439.13	transcript	ENST00000282292.9	protein_coding					2792		chr19	TogoVar
	ZNF778_chr16_89212703_89242141	89233024	GTCGCACT others(39): Show GTCGCACTGCGTATGCAACTCAGCTCGCTCTGCGTATGCAACTCAGC	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01516.hp1 HG03239.hp1 NA20752.hp1 HG01516.hp1 HG03239.hp1 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0035 a0001c0001t0068 a0001c0001t0035 a0001c0001t0068	a0001c0001t0035g0002 a0001c0001t0035g0215 a0001c0001t0068g0227 a0001c0001t0035g0002 a0001c0001t0035g0215 a0001c0001t0068g0227	3	364	0.0082	-46	c.44 others(57): Show c.4490_*4535delTCTGCGTATGCAACTCAGCTCGCACTGCGTATGC AACTCAGCTCGC		ZNF778	ENSG00000170100.14	transcript	ENST00000433976.7	protein_coding	7/7				4490	INFO_REALIGN_3_PRIME	chr16	TogoVar
	ZNF778_chr16_89212703_89242141	89233075	ACTGCGTA others(39): Show ACTGCGTATGCAACTCAGCTCGCACTGCGTATGCAAGTCAGCTCGCT	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01928.hp2 HG01928.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0020 a0001c0002t0020	a0001c0002t0020g0089 a0001c0002t0020g0089	1	414	0.0024	-46	c.45 others(57): Show c.4536_*4581delACTGCGTATGCAAGTCAGCTCGCTCTGCGTATGC AACTCAGCTCGC		ZNF778	ENSG00000170100.14	transcript	ENST00000433976.7	protein_coding	7/7				4536	INFO_REALIGN_3_PRIME	chr16	TogoVar
	ZNF778_chr16_89212703_89242141	89233121	TCTGCGTA others(39): Show TCTGCGTATGCAACTCAGCTCGCTCTGCGTATGCAACTCAGCTCGCA	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03139.hp2 HG03139.hp2	a0018 a0018	a0018c0016 a0018c0016	a0018c0016t0150 a0018c0016t0150	a0018c0016t0150g0191 a0018c0016t0150g0191	1	432	0.0023	-46	c.45 others(57): Show c.4582_*4627delTCTGCGTATGCAACTCAGCTCGCACTGCGTATGC AACTCAGCTCGC		ZNF778	ENSG00000170100.14	transcript	ENST00000433976.7	protein_coding	7/7				4582	INFO_REALIGN_3_PRIME	chr16	TogoVar
	ZNF778_chr16_89212703_89242141	89233236	TCTGCGTA others(39): Show TCTGCGTATGCAACTCAGCTCGCTCTGCGTATGCAACTCAGCTCGCA	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA18977.hp2 NA18988.hp2 NA18977.hp2 NA18988.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0038 a0001c0001t0038	a0001c0001t0038g0038 a0001c0001t0038g0111 a0001c0001t0038g0038 a0001c0001t0038g0111	2	432	0.0046	-46	c.47 others(57): Show c.4720_*4765delACTGCGTATGCAACTCAGCTCGCTCTGCGTATGC AACTCAGCTCGC		ZNF778	ENSG00000170100.14	transcript	ENST00000433976.7	protein_coding	7/7				4720	INFO_REALIGN_3_PRIME	chr16	TogoVar
	ZNF778_chr16_89212703_89242141	89233360	GCAACTCG others(39): Show GCAACTCGCACTGCGTATGCAACTCAACTCGCACTGCGTATGCAACT	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02559.hp1 HG02895.hp1 HG02896.hp2 others(3): Show HG02559.hp1 HG02895.hp1 HG02896.hp2 HG02897.hp2 HG03098.hp1 HG03195.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0025 a0002c0003t0042 a0002c0003t0134 a0002c0003t0025 a0002c0003t0042 a0002c0003t0134	a0002c0003t0025g0052 a0002c0003t0025g0078 a0002c0003t0042g0205 others(2): Show a0002c0003t0025g0052 a0002c0003t0025g0078 a0002c0003t0042g0205 a0002c0003t0042g0206 a0002c0003t0134g0228	6	432	0.0139	-46	c.48 others(57): Show c.4837_*4882delATGCAACTCAACTCGCACTGCGTATGCAACTCAA CTCGCACTGCGT		ZNF778	ENSG00000170100.14	transcript	ENST00000433976.7	protein_coding	7/7				4837	INFO_REALIGN_3_PRIME	chr16	TogoVar
	ZNF83_chr19_52607377_52643355	52608317	AAATATAT others(39): Show AAATATATATAATATATATTATATAAAATATATATGTAATATATATT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02622.hp2 HG02622.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0005 a0002c0002t0005	a0002c0002t0005g0081 a0002c0002t0005g0081	1	457	0.0022	-46	c.46 others(57): Show c.4651_*4696delAATATATATTACATATATATTTTATATAATATAT ATTATATATATT		ZNF83	ENSG00000167766.21	transcript	ENST00000301096.8	protein_coding					4059		chr19	TogoVar
	ZP4_chr1_237877404_237895922	237884007	CACACACA others(39): Show CACACACACAAACACACACACACACAAACACACACAAACACACACAA	C C	intron_variant intron_variant	MODIFIER	HG03098.hp1 NA20129.hp1 HG03098.hp1 NA20129.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0011 a0001c0002t0001g0011	2	381	0.0052	-46	c.139 others(63): Show c.1390+716_1390+761delTTGTGTGTGTTTGTGTGTGTTTGTGTGT GTGTGTGTTTGTGTGTGT		ZP4	ENSG00000116996.10	transcript	ENST00000366570.5	protein_coding	10/11						chr1	TogoVar
	ZRANB3_chr2_135191969_135536218	135493098	AATATATA others(39): Show AATATATATATATATATATATATATATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01175.hp2 HG02109.hp1 HG03486.hp1 others(3): Show HG01175.hp2 HG02109.hp1 HG03486.hp1 NA19043.hp2 NA19240.hp2 NA21309.hp2	a0001 a0002 a0006 a0001 a0002 a0006	a0001c0001 a0002c0003 a0006c0008 a0001c0001 a0002c0003 a0006c0008	a0001c0001t0001 a0002c0003t0003 a0006c0008t0009 a0001c0001t0001 a0002c0003t0003 a0006c0008t0009	a0001c0001t0001g0118 a0002c0003t0003g0076 a0002c0003t0003g0077 others(3): Show a0001c0001t0001g0118 a0002c0003t0003g0076 a0002c0003t0003g0077 a0002c0003t0003g0078 a0006c0008t0009g0081 a0006c0008t0009g0082	6	13	0.4615	-46	c.161 others(65): Show c.161+11185_161+11230delATATATATATATATATATATATATAT ATATATATATATATATATAT		ZRANB3	ENSG00000121988.18	transcript	ENST00000264159.11	protein_coding	2/20						chr2	TogoVar
	ZYG11B_chr1_52721453_52832336	52817791	ATATATAT others(39): Show ATATATATATATATATATATATATATTTTTTTTTTTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00609.hp2 HG00609.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0096 a0001c0001t0001g0096	1	346	0.0029	-46	c.204 others(65): Show c.2044+1164_2044+1209delATATATATATATATATATATATATTT TTTTTTTTTTTTTTTTTTTT		ZYG11B	ENSG00000162378.13	transcript	ENST00000294353.7	protein_coding	13/13					INFO_REALIGN_3_PRIME	chr1	TogoVar
	ZZEF1_chr17_3999445_4148030	4112033	AATATATA others(39): Show AATATATATATATATATATATATATATATATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02015.hp1 HG02922.hp2 HG03041.hp1 others(2): Show HG02015.hp1 HG02922.hp2 HG03041.hp1 HG03130.hp1 NA18522.hp2	a0001 a0006 a0010 a0001 a0006 a0010	a0001c0001 a0006c0019 a0010c0045 a0001c0001 a0006c0019 a0010c0045	a0001c0001t0001 a0006c0019t0003 a0010c0045t0003 a0001c0001t0001 a0006c0019t0003 a0010c0045t0003	a0001c0001t0001g0117 a0006c0019t0003g0221 a0006c0019t0003g0222 others(2): Show a0001c0001t0001g0117 a0006c0019t0003g0221 a0006c0019t0003g0222 a0006c0019t0003g0223 a0010c0045t0003g0041	5	41	0.1220	-46	c.106 others(63): Show c.1066+530_1066+575delATATATATATATATATATATATATATAT ATATATATATATATATAT		ZZEF1	ENSG00000074755.15	transcript	ENST00000381638.7	protein_coding	5/54						chr17	TogoVar