Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
KL_chr13_33011423_33071143	33036334	AACACATG others(42): Show AACACATGCACACACACCACACACACATACACATACCACATACATACCAC	A A	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02257.hp2 HG01884.hp2 HG02257.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0005 a0001c0001t0001 a0001c0001t0005	a0001c0001t0001g0185 a0001c0001t0005g0186 a0001c0001t0001g0185 a0001c0001t0005g0186	2	394	0.0051	-49	c.820 others(68): Show c.820-17406_820-17358delTACACATACCACATACATACCACACA CATGCACACACACCACACACACA	KL	ENSG00000133116.8	transcript	ENST00000380099.4	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr13	TogoVar
KRT82_chr12_52388931_52411335	52409924	GTCCGGGA others(42): Show GTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(110): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00423.hp2 HG00673.hp1 HG00735.hp1 HG01069.hp2 HG01074.hp1 HG01099.hp1 HG01106.hp2 HG01123.hp1 HG01167.hp1 HG01167.hp2 HG01169.hp1 HG01175.hp1 HG01243.hp1 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01358.hp1 HG01361.hp1 HG01433.hp1 HG01433.hp2 HG01515.hp1 HG01517.hp1 HG01891.hp1 HG01891.hp2 HG01934.hp2 HG01943.hp1 HG01952.hp1 HG01993.hp1 HG01993.hp2 HG02055.hp2 HG02109.hp2 HG02132.hp1 HG02145.hp1 HG02145.hp2 HG02155.hp2 HG02257.hp1 HG02258.hp1 HG02273.hp2 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp2 HG02523.hp2 HG02559.hp2 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp2 HG02630.hp2 HG02647.hp1 HG02698.hp1 HG02698.hp2 HG02717.hp2 HG02818.hp2 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02970.hp1 HG02976.hp2 HG03130.hp1 HG03195.hp1 HG03209.hp2 HG03453.hp1 HG03471.hp2 HG03491.hp2 HG03492.hp1 HG03516.hp2 HG03579.hp1 HG03688.hp2 HG03704.hp1 HG03710.hp1 HG03831.hp2 HG03927.hp2 HG04115.hp1 HG04184.hp1 HG04184.hp2 HG04199.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18906.hp2 NA18949.hp2 NA18963.hp1 NA18968.hp1 NA18984.hp2 NA18993.hp1 NA18995.hp2 NA18998.hp1 NA19005.hp1 NA19006.hp2 NA19043.hp1 NA19057.hp2 NA19066.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp2 NA20805.hp2 NA20905.hp2 NA21309.hp1 NA21309.hp2	a0001 a0002 a0003 others(5): Show a0001 a0002 a0003 a0004 a0005 a0008 a0010 a0012	a0001c0001 a0002c0002 a0002c0008 others(6): Show a0001c0001 a0002c0002 a0002c0008 a0003c0003 a0004c0004 a0005c0005 a0008c0016 a0010c0020 a0012c0012	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 others(13): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0002c0002t0001 a0002c0002t0011 a0002c0002t0014 a0002c0008t0001 a0003c0003t0007 a0003c0003t0008 a0004c0004t0001 a0004c0004t0013 a0005c0005t0007 a0008c0016t0001 a0010c0020t0001 a0012c0012t0001	a0001c0001t0002g0093 a0001c0001t0003g0026 a0001c0001t0004g0095 others(38): Show a0001c0001t0002g0093 a0001c0001t0003g0026 a0001c0001t0004g0095 a0001c0001t0006g0014 a0001c0001t0006g0043 a0001c0001t0006g0103 a0002c0002t0001g0003 a0002c0002t0001g0006 a0002c0002t0001g0012 a0002c0002t0001g0013 a0002c0002t0001g0016 a0002c0002t0001g0020 a0002c0002t0001g0021 a0002c0002t0001g0040 a0002c0002t0001g0042 a0002c0002t0001g0092 a0002c0002t0001g0094 a0002c0002t0001g0097 a0002c0002t0001g0099 a0002c0002t0001g0104 a0002c0002t0001g0106 a0002c0002t0001g0107 a0002c0002t0001g0108 a0002c0002t0001g0110 a0002c0002t0011g0101 a0002c0002t0014g0102 a0002c0008t0001g0027 a0003c0003t0007g0017 a0003c0003t0007g0019 a0003c0003t0007g0039 a0003c0003t0008g0011 a0003c0003t0008g0034 a0003c0003t0008g0035 a0004c0004t0001g0029 a0004c0004t0001g0030 a0004c0004t0013g0032 a0005c0005t0007g0018 a0005c0005t0007g0036 a0008c0016t0001g0041 a0010c0020t0001g0105 a0012c0012t0001g0100	113	277	0.4079	-49	c.-36 others(60): Show c.-3696_-3648delTGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCC CACCTCCCTCCCGGA	KRT82	ENSG00000161850.3	transcript	ENST00000257974.3	protein_coding		3590		chr12	TogoVar
KRTAP1-1_chr17_41035541_41046450	41035696	TTTCTTTC others(42): Show TTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTCTTTCTTTCTTTCTTTC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01515.hp2 HG02735.hp1 HG04204.hp1 others(5): Show HG01515.hp2 HG02735.hp1 HG04204.hp1 NA18612.hp1 NA18957.hp2 NA18998.hp2 NA19087.hp1 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	8	398	0.0201	-49	c.51 others(60): Show c.5119_*5167delGAAAGAAAGAAAGAAAGAGAAAGAAGGAAAGAAA GAAAGAAAGAAAGAA	KRTAP1-1	ENSG00000188581.9	transcript	ENST00000306271.5	protein_coding		4844		chr17	TogoVar
KRTAP1-1_chr17_41035541_41046450	41035699	CTTTCTTT others(42): Show CTTTCTTTCTTTCTTTCTTTCCTTCTTTCTCTTTCTTTCTTTCTTTCCTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02258.hp2 HG02559.hp2 HG03704.hp2 others(3): Show HG02258.hp2 HG02559.hp2 HG03704.hp2 NA18522.hp2 NA19043.hp2 NA19240.hp1	a0002 a0002	a0002c0002 a0002c0006 a0002c0002 a0002c0006	a0002c0002t0001 a0002c0006t0001 a0002c0002t0001 a0002c0006t0001	a0002c0002t0001g0000 a0002c0006t0001g0000 a0002c0002t0001g0000 a0002c0006t0001g0000	6	364	0.0165	-49	c.51 others(60): Show c.5116_*5164delAAGGAAAGAAAGAAAGAAAGAGAAAGAAGGAAAG AAAGAAAGAAAGAAA	KRTAP1-1	ENSG00000188581.9	transcript	ENST00000306271.5	protein_coding		4841		chr17	TogoVar
KRTAP1-3_chr17_41028884_41039874	41035696	TTTCTTTC others(42): Show TTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTCTTTCTTTCTTTCTTTC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01515.hp1 HG02735.hp1 HG03688.hp2 others(6): Show HG01515.hp1 HG02735.hp1 HG03688.hp2 HG04204.hp2 NA18612.hp2 NA18957.hp2 NA18998.hp1 NA19087.hp2 NA20805.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0000 a0002c0002t0001g0000	9	430	0.0209	-49	c.-92 others(58): Show c.-924_-876delGAAAGAAAGAAAGAAAGAGAAAGAAGGAAAGAAAGA AAGAAAGAAAGAA	KRTAP1-3	ENSG00000221880.4	transcript	ENST00000344363.7	protein_coding		823		chr17	TogoVar
KRTAP1-3_chr17_41028884_41039874	41035699	CTTTCTTT others(42): Show CTTTCTTTCTTTCTTTCTTTCCTTCTTTCTCTTTCTTTCTTTCTTTCCTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02258.hp2 HG02559.hp1 HG03704.hp2 others(3): Show HG02258.hp2 HG02559.hp1 HG03704.hp2 NA18522.hp1 NA19043.hp1 NA19240.hp1	a0002 a0005 a0002 a0005	a0002c0003 a0005c0006 a0002c0003 a0005c0006	a0002c0003t0001 a0005c0006t0001 a0005c0006t0008 a0002c0003t0001 a0005c0006t0001 a0005c0006t0008	a0002c0003t0001g0000 a0005c0006t0001g0000 a0005c0006t0008g0000 a0002c0003t0001g0000 a0005c0006t0001g0000 a0005c0006t0008g0000	6	394	0.0152	-49	c.-92 others(58): Show c.-927_-879delAAGGAAAGAAAGAAAGAAAGAGAAAGAAGGAAAGAA AGAAAGAAAGAAA	KRTAP1-3	ENSG00000221880.4	transcript	ENST00000344363.7	protein_coding		826		chr17	TogoVar
KRTAP12-3_chr21_44652932_44663341	44659281	TCCTAAGC others(42): Show TCCTAAGCACAAGCACTGATGATACACCCTAAGCACAAGCACTGATACAC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp2 HG00738.hp2 HG01074.hp1 others(32): Show HG00099.hp2 HG00738.hp2 HG01074.hp1 HG01261.hp2 HG01884.hp1 HG01891.hp1 HG01891.hp2 HG02109.hp2 HG02145.hp2 HG02257.hp1 HG02451.hp2 HG02486.hp1 HG02572.hp2 HG02602.hp2 HG02698.hp2 HG02723.hp2 HG02809.hp2 HG02818.hp2 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03041.hp1 HG03195.hp1 HG03209.hp1 HG03209.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp2 HG03516.hp2 HG03579.hp2 HG04228.hp1 NA18522.hp1 NA18522.hp2 NA19043.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0004c0004 a0001c0001 a0004c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0004c0004t0001	a0001c0001t0001g0000 a0001c0001t0002g0000 a0001c0001t0003g0000 others(1): Show a0001c0001t0001g0000 a0001c0001t0002g0000 a0001c0001t0003g0000 a0004c0004t0001g0000	35	157	0.2229	-49	c.10 others(60): Show c.1012_*1060delCCTAAGCACAAGCACTGATGATACACCCTAAGCA CAAGCACTGATACAC	KRTAP12-3	ENSG00000205439.10	transcript	ENST00000397907.1	protein_coding		941		chr21	TogoVar
KRTAP12-4_chr21_44649213_44659659	44659281	TCCTAAGC others(42): Show TCCTAAGCACAAGCACTGATGATACACCCTAAGCACAAGCACTGATACAC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp2 HG00738.hp2 HG01074.hp1 others(33): Show HG00099.hp2 HG00738.hp2 HG01074.hp1 HG01261.hp2 HG01884.hp1 HG01891.hp1 HG01891.hp2 HG02109.hp2 HG02145.hp1 HG02257.hp1 HG02451.hp2 HG02486.hp1 HG02572.hp2 HG02602.hp2 HG02698.hp1 HG02723.hp1 HG02809.hp2 HG02818.hp2 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03041.hp2 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp2 HG03486.hp2 HG03516.hp1 HG03579.hp2 HG04115.hp2 HG04228.hp1 NA18522.hp1 NA18522.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0000 a0001c0001t0002g0000 a0001c0001t0001g0000 a0001c0001t0002g0000	36	157	0.2293	-49	c.-47 others(60): Show c.-4716_-4668delGTGTATCAGTGCTTGTGCTTAGGGTGTATCATCA GTGCTTGTGCTTAGG	KRTAP12-4	ENSG00000212933.1	transcript	ENST00000391618.1	protein_coding		4623		chr21	TogoVar
KRTAP16-1_chr17_41302700_41314309	41310340	AAGAAGAA others(42): Show AAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18943.hp2 NA18979.hp1 NA19005.hp2 NA18943.hp2 NA18979.hp1 NA19005.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0000 a0002c0002t0001g0000	3	420	0.0071	-49	c.-11 others(60): Show c.-1136_-1088delCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT TTCTTTCTTTCTTCT	KRTAP16-1	ENSG00000212657.2	transcript	ENST00000391352.2	protein_coding		1032		chr17	TogoVar
KRTAP17-1_chr17_41309912_41320710	41310340	AAGAAGAA others(42): Show AAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18943.hp1 NA18979.hp1 NA19005.hp2 NA18943.hp1 NA18979.hp1 NA19005.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0000 a0002c0002t0002g0000	3	412	0.0073	-49	c.49 others(60): Show c.4944_*4992delCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT TTCTTTCTTTCTTCT	KRTAP17-1	ENSG00000186860.5	transcript	ENST00000334202.5	protein_coding		4571		chr17	TogoVar
KSR2_chr12_117448012_117973990	117541203	AGGAACAG others(42): Show AGGAACAGTAGCTGATGTGGAGGCATGGGAGGCAGGGAGGCAGGCAGGGG	A A	intron_variant intron_variant	MODIFIER	HG03130.hp1 HG03130.hp1	a0001 a0001	a0001c0015 a0001c0015	a0001c0015t0020 a0001c0015t0020	a0001c0015t0020g0142 a0001c0015t0020g0142	1	194	0.0052	-49	c.151 others(68): Show c.1519-1365_1519-1317delCCCCTGCCTGCCTCCCTGCCTCCCAT GCCTCCACATCAGCTACTGTTCC	KSR2	ENSG00000171435.15	transcript	ENST00000339824.7	protein_coding	9/19			chr12	TogoVar
LAIR2_chr19_54497831_54515687	54512436	CTTTATTT others(42): Show CTTTATTTTTGCCTTCTTCTGTTACATGATGACTGATTTTCTCTGTTCTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18969.hp1 NA18969.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0031 a0001c0001t0001g0031	1	474	0.0021	-49	c.18 others(60): Show c.1868_*1916delTTTATTTTTGCCTTCTTCTGTTACATGATGACTG ATTTTCTCTGTTCTT	LAIR2	ENSG00000167618.10	transcript	ENST00000301202.7	protein_coding		1750		chr19	TogoVar
LAMA1_chr18_6936742_7122797	7073841	TGTGTGTG others(42): Show TGTGTGTGTTTATGAGAAGGAGTCTTGCTCTGTCGCCAGGCTGGAGTGCA	T T	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG00741.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0161 a0001c0001t0001g0161	1	276	0.0036	-49	c.345 others(66): Show c.345+6085_345+6133delTGCACTCCAGCCTGGCGACAGAGCAAGA CTCCTTCTCATAAACACACAC	LAMA1	ENSG00000101680.16	transcript	ENST00000389658.4	protein_coding	3/62			chr18	TogoVar
LAMA4_chr6_112102931_112259567	112190898	TCTTTCTT others(42): Show TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC	T T	intron_variant intron_variant	MODIFIER	HG02027.hp2 HG02155.hp2 HG02027.hp2 HG02155.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0001 a0003c0004t0001	a0003c0004t0001g0225 a0003c0004t0001g0234 a0003c0004t0001g0225 a0003c0004t0001g0234	2	312	0.0064	-49	c.718 others(64): Show c.718+689_718+737delGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA AAGAAAGAAAGAAAGAAAG	LAMA4	ENSG00000112769.20	transcript	ENST00000230538.12	protein_coding	6/38			chr6	TogoVar
LARP1B_chr4_128056312_128216988	128083772	TGGACGGG others(42): Show TGGACGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCC	T T	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02451.hp2 HG02145.hp1 HG02451.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0104 a0002c0003t0001g0105 a0002c0003t0001g0104 a0002c0003t0001g0105	2	334	0.0060	-49	c.358 others(66): Show c.358+1482_358+1530delGCCGGGCGGGGGGCTGACCCCCCCACCT CCCTCCCGGACGGGGCGGCTG	LARP1B	ENSG00000138709.20	transcript	ENST00000326639.11	protein_coding	5/19		INFO_REALIGN_3_PRIME	chr4	TogoVar
LCN1_chr9_135516440_135531540	135526998	GTCCTCCG others(42): Show GTCCTCCGGGGAGCCACACCAGCACTGCCCCCAGAGCCTGGCTCCACGCT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01106.hp2 HG01106.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0073 a0001c0001t0001g0073	1	434	0.0023	-49	c.65 others(58): Show c.657_*705delTCCTCCGGGGAGCCACACCAGCACTGCCCCCAGAGC CTGGCTCCACGCT	LCN1	ENSG00000160349.10	transcript	ENST00000371781.4	protein_coding		459		chr9	TogoVar
LCN1_chr9_135516440_135531540	135527926	ATGCCTCG others(42): Show ATGCCTCGGGTCATAGACCTTGTGACCTCACAGGTGCGTCCTCCCCACTG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02109.hp1 HG02717.hp2 HG02723.hp1 others(2): Show HG02109.hp1 HG02717.hp2 HG02723.hp1 HG03453.hp2 HG03486.hp2	a0004 a0007 a0004 a0007	a0004c0004 a0007c0007 a0004c0004 a0007c0007	a0004c0004t0001 a0007c0007t0001 a0004c0004t0001 a0007c0007t0001	a0004c0004t0001g0032 a0004c0004t0001g0065 a0004c0004t0001g0066 others(2): Show a0004c0004t0001g0032 a0004c0004t0001g0065 a0004c0004t0001g0066 a0007c0007t0001g0078 a0007c0007t0001g0088	5	421	0.0119	-49	c.15 others(60): Show c.1585_*1633delTGCCTCGGGTCATAGACCTTGTGACCTCACAGGT GCGTCCTCCCCACTG	LCN1	ENSG00000160349.10	transcript	ENST00000371781.4	protein_coding		1387		chr9	TogoVar
LCOR_chr10_96827298_97000956	96941179	AGGCGGGG others(42): Show AGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCG	A A	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG02257.hp1 HG02717.hp1 others(7): Show HG01109.hp1 HG02257.hp1 HG02717.hp1 HG02886.hp1 HG03195.hp2 HG03453.hp1 HG03471.hp2 HG06807.hp2 NA19030.hp1 NA19043.hp1	a0001 a0004 a0001 a0004	a0001c0007 a0004c0005 a0001c0007 a0004c0005	a0001c0007t0080 a0004c0005t0019 a0004c0005t0032 others(7): Show a0001c0007t0080 a0004c0005t0019 a0004c0005t0032 a0004c0005t0033 a0004c0005t0035 a0004c0005t0036 a0004c0005t0037 a0004c0005t0038 a0004c0005t0039 a0004c0005t0040	a0001c0007t0080g0181 a0004c0005t0019g0171 a0004c0005t0032g0170 others(7): Show a0001c0007t0080g0181 a0004c0005t0019g0171 a0004c0005t0032g0170 a0004c0005t0033g0124 a0004c0005t0035g0168 a0004c0005t0036g0125 a0004c0005t0037g0173 a0004c0005t0038g0167 a0004c0005t0039g0169 a0004c0005t0040g0172	10	286	0.0350	-49	c.-18 others(68): Show c.-183-2885_-183-2837delGGGCGGGGGGCTGACCCCCCCACCTC CCTCCCGGACGGGGCGGCTGGCC	LCOR	ENSG00000196233.14	transcript	ENST00000421806.4	protein_coding	4/7		INFO_REALIGN_3_PRIME	chr10	TogoVar
LETM1_chr4_1806479_1861156	1828271	GGGGGGCT others(42): Show GGGGGGCTGACCCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCCGGGCA	G G	intron_variant intron_variant	MODIFIER	HG02559.hp1 NA18522.hp1 NA18522.hp2 HG02559.hp1 NA18522.hp1 NA18522.hp2	a0002 a0009 a0002 a0009	a0002c0003 a0009c0006 a0002c0003 a0009c0006	a0002c0003t0021 a0009c0006t0025 a0009c0006t0027 a0002c0003t0021 a0009c0006t0025 a0009c0006t0027	a0002c0003t0021g0027 a0009c0006t0025g0030 a0009c0006t0027g0031 a0002c0003t0021g0027 a0009c0006t0025g0030 a0009c0006t0027g0031	3	198	0.0152	-49	c.108 others(68): Show c.1081-2637_1081-2589delTGCCCGGCCAGCCGCCCCGTCCGGGA GGGAGGTGGGGGGGTCAGCCCCC	LETM1	ENSG00000168924.15	transcript	ENST00000302787.3	protein_coding	6/13			chr4	TogoVar
LGALS4_chr19_38796674_38817945	38797810	CCCCCCAC others(42): Show CCCCCCACCTCCCTCCCGGACGGGGCGGCTGGCTGGGCAGGGGGCTGACT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01123.hp1 HG02630.hp2 HG02970.hp2 others(4): Show HG01123.hp1 HG02630.hp2 HG02970.hp2 HG03041.hp2 HG03225.hp2 HG03540.hp1 NA18522.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0037 a0001c0001t0001g0063 a0001c0001t0001g0064 others(4): Show a0001c0001t0001g0037 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0207 a0001c0001t0001g0266 a0001c0001t0001g0296	7	424	0.0165	-49	c.39 others(60): Show c.3905_*3953delAGTCAGCCCCCTGCCCAGCCAGCCGCCCCGTCCG GGAGGGAGGTGGGGG	LGALS4	ENSG00000171747.9	transcript	ENST00000307751.9	protein_coding		3863		chr19	TogoVar
LHPP_chr10_124456823_124619141	124506684	AGATTTCA others(42): Show AGATTTCAGGTTGGCGGGTAGGGAAGATTTCAAGTGGGGTGGGTAAGGAG	A A	intron_variant intron_variant	MODIFIER	HG02738.hp2 HG02738.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0243 a0001c0001t0001g0243	1	185	0.0054	-49	c.624 others(66): Show c.624+8570_624+8618delCGGGTAGGGAAGATTTCAAGTGGGGTGG GTAAGGAGGATTTCAGGTTGG	LHPP	ENSG00000107902.14	transcript	ENST00000368842.10	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LHPP_chr10_124456823_124619141	124507365	CAGGATTT others(42): Show CAGGATTTCAGGTGGGGGGATAGGGAGTATTTCAGGTGGGGAGGGTAGGG	C C	intron_variant intron_variant	MODIFIER	HG02523.hp2 HG02523.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0076 a0001c0001t0001g0076	1	242	0.0041	-49	c.624 others(66): Show c.624+9251_624+9299delGGGGGATAGGGAGTATTTCAGGTGGGGA GGGTAGGGAGGATTTCAGGTG	LHPP	ENSG00000107902.14	transcript	ENST00000368842.10	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LHPP_chr10_124456823_124619141	124507402	GGGGAGGG others(42): Show GGGGAGGGTAGGGAGGATTTCAGGTGTGGAGGGTAGACAGGATTTCAGGT	G G	intron_variant intron_variant	MODIFIER	HG01515.hp2 HG04184.hp1 HG04204.hp2 others(2): Show HG01515.hp2 HG04184.hp1 HG04204.hp2 NA18961.hp1 NA19081.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0001c0001t0001 a0002c0002t0001	a0001c0001t0001g0001 a0001c0001t0001g0067 a0001c0001t0001g0156 others(2): Show a0001c0001t0001g0001 a0001c0001t0001g0067 a0001c0001t0001g0156 a0001c0001t0001g0171 a0002c0002t0001g0021	5	225	0.0222	-49	c.624 others(66): Show c.624+9278_624+9326delAGGGTAGGGAGGATTTCAGGTGTGGAGG GTAGACAGGATTTCAGGTGGG	LHPP	ENSG00000107902.14	transcript	ENST00000368842.10	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LHPP_chr10_124456823_124619141	124507409	GTAGGGAG others(42): Show GTAGGGAGGATTTCAGGTGTGGAGGGTAGACAGGATTTCAGGTGGGGGGA	G G	intron_variant intron_variant	MODIFIER	NA19012.hp1 NA19090.hp1 NA19012.hp1 NA19090.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0141 a0002c0002t0001g0195 a0002c0002t0001g0141 a0002c0002t0001g0195	2	255	0.0078	-49	c.624 others(66): Show c.624+9338_624+9386delGATTTCAGGTGTGGAGGGTAGACAGGAT TTCAGGTGGGGGGATAGGGAG	LHPP	ENSG00000107902.14	transcript	ENST00000368842.10	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LHPP_chr10_124456823_124619141	124507653	GGATAGGG others(42): Show GGATAGGGAGTATTTCAGGTGGGGAGGGTAGACAGGATTTCAGGTGTGGA	G G	intron_variant intron_variant	MODIFIER	HG00099.hp2 NA19090.hp1 HG00099.hp2 NA19090.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0001c0001t0001 a0002c0002t0001	a0001c0001t0001g0187 a0002c0002t0001g0195 a0001c0001t0001g0187 a0002c0002t0001g0195	2	258	0.0078	-49	c.625 others(66): Show c.625-9525_625-9477delATAGGGAGTATTTCAGGTGGGGAGGGTA GACAGGATTTCAGGTGTGGAG	LHPP	ENSG00000107902.14	transcript	ENST00000368842.10	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LHPP_chr10_124456823_124619141	124507796	GGGGGGGG others(42): Show GGGGGGGGTAGGGAGGATTTCAGGTGTGGAGGGTAGACAGGATTTCAGGT	G G	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0007 a0003c0004t0007	a0003c0004t0007g0006 a0003c0004t0007g0006	1	184	0.0054	-49	c.625 others(66): Show c.625-9358_625-9310delTGGAGGGTAGACAGGATTTCAGGTGGGG GGGTAGGGAGGATTTCAGGTG	LHPP	ENSG00000107902.14	transcript	ENST00000368842.10	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LINGO2_chr9_27932617_29218601	29188985	TGGGGCGG others(42): Show TGGGGCGGCTGGCCGGGCGGGGGGCTGACCCCCCCACCTACCTCCCAGAC	T T	intron_variant intron_variant	MODIFIER	HG03486.hp1 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0025 a0001c0001t0025	a0001c0001t0025g0055 a0001c0001t0025g0055	1	62	0.0161	-49	c.-49 others(70): Show c.-492+23888_-492+23936delGTCTGGGAGGTAGGTGGGGGGGTC AGCCCCCCGCCCGGCCAGCCGCCCC	LINGO2	ENSG00000174482.11	transcript	ENST00000698399.1	protein_coding	1/6			chr9	TogoVar
LIPG_chr18_49557057_49604185	49577657	CACCTCCC others(42): Show CACCTCCCTCCCGGACGGCACGGCTGGCCAGGCGGGGGGCTGACCCCCCA	C C	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00280.hp2 HG00423.hp2 others(16): Show HG00140.hp1 HG00280.hp2 HG00423.hp2 HG00733.hp2 HG00741.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp2 HG01123.hp2 HG01175.hp2 HG01361.hp2 HG03017.hp1 HG03453.hp2 HG03579.hp2 HG03942.hp1 NA18939.hp2 NA18947.hp1 NA18998.hp1 NA19084.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0003 a0001c0001t0052 a0001c0001t0053 others(8): Show a0001c0001t0003 a0001c0001t0052 a0001c0001t0053 a0001c0001t0084 a0001c0001t0085 a0001c0001t0112 a0002c0002t0005 a0002c0002t0009 a0002c0002t0071 a0002c0002t0072 a0002c0002t0073	a0001c0001t0003g0033 a0001c0001t0003g0037 a0001c0001t0052g0347 others(15): Show a0001c0001t0003g0033 a0001c0001t0003g0037 a0001c0001t0052g0347 a0001c0001t0053g0318 a0001c0001t0084g0249 a0001c0001t0085g0254 a0001c0001t0112g0040 a0002c0002t0005g0339 a0002c0002t0009g0024 a0002c0002t0009g0280 a0002c0002t0009g0325 a0002c0002t0009g0328 a0002c0002t0009g0331 a0002c0002t0009g0334 a0002c0002t0009g0337 a0002c0002t0071g0333 a0002c0002t0072g0336 a0002c0002t0073g0345	19	382	0.0497	-49	c.793 others(66): Show c.793+2082_793+2130delCGGCACGGCTGGCCAGGCGGGGGGCTGA CCCCCCAACCTCCCTCCCGGA	LIPG	ENSG00000101670.12	transcript	ENST00000261292.9	protein_coding	5/9		INFO_REALIGN_3_PRIME	chr18	TogoVar
LITAFD_chr16_8877351_8890350	8883747	AGTGAAGA others(42): Show AGTGAAGATGACGTCACCATTGAAAAGCACCCTTTAGGTCAGGTGCGGTG	A A	intron_variant intron_variant	MODIFIER	HG02155.hp2 HG02155.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0025 a0001c0001t0001g0025	1	404	0.0025	-49	c.-34 others(64): Show c.-34+463_-34+511delTGAAGATGACGTCACCATTGAAAAGCACCC TTTAGGTCAGGTGCGGTGG	LITAFD	ENSG00000283516.2	transcript	ENST00000636296.2	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr16	TogoVar
LMF1_chr16_848634_975984	858963	GCAGTGGT others(42): Show GCAGTGGTGTCACGGGACGGGTGTGCAGTGGTGTCACGGGACGCGTGTGC	G G	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG03516.hp1 HG02976.hp1 HG03516.hp1	a0009 a0009	a0009c0024 a0009c0024	a0009c0024t0001 a0009c0024t0001	a0009c0024t0001g0117 a0009c0024t0001g0118 a0009c0024t0001g0117 a0009c0024t0001g0118	2	268	0.0075	-49	c.153 others(68): Show c.1530-4306_1530-4258delGCACACGCGTCCCGTGACACCACTGC ACACCCGTCCCGTGACACCACTG	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	10/10			chr16	TogoVar
LMF1_chr16_848634_975984	859104	GCAGTGAT others(42): Show GCAGTGATGTCTCGGGACGGGTGTGCACTGATGTCACGGGACGGGTGTGC	G G	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02257.hp1	a0001 a0001	a0001c0023 a0001c0023	a0001c0023t0001 a0001c0023t0001	a0001c0023t0001g0246 a0001c0023t0001g0246	1	278	0.0036	-49	c.153 others(68): Show c.1530-4447_1530-4399delGCACACCCGTCCCGTGACATCAGTGC ACACCCGTCCCGAGACATCACTG	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	10/10			chr16	TogoVar
LMF1_chr16_848634_975984	859316	GCAGTGTT others(42): Show GCAGTGTTGTCACGGGACGGGTGTGCAGTGGTGTCTCGGGACGGGTGTGC	G G	intron_variant intron_variant	MODIFIER	HG03225.hp1 HG03225.hp1	a0007 a0007	a0007c0046 a0007c0046	a0007c0046t0004 a0007c0046t0004	a0007c0046t0004g0036 a0007c0046t0004g0036	1	167	0.0060	-49	c.153 others(68): Show c.1530-4659_1530-4611delGCACACCCGTCCCGAGACACCACTGC ACACCCGTCCCGTGACAACACTG	LMF1	ENSG00000103227.19	transcript	ENST00000262301.16	protein_coding	10/10			chr16	TogoVar
LOC112267897_chr13_63741741_63753176	63749392	GATCGTGA others(42): Show GATCGTGAATGACTTACATATTGTCTTTTGAATACATATTAATTTGCATC	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03139.hp2 HG03139.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	424	0.0024	-49	c.22 others(60): Show c.2203_*2251delATCGTGAATGACTTACATATTGTCTTTTGAATAC ATATTAATTTGCATC	LOC112267897	ENSG00000237378.3	transcript	ENST00000611641.1	protein_coding		1217		chr13	TogoVar
LONP1_chr19_5686834_5725146	5702290	ATCCGGGA others(42): Show ATCCGGGAGGGAGGTGGAGGCGTCAGCCCCCCGCCCAGCCAGCCGCCCCG	A A	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02257.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0059 a0001c0002t0001g0059	1	383	0.0026	-49	c.136 others(68): Show c.1368-1412_1368-1364delCGGGGCGGCTGGCTGGGCGGGGGGCT GACGCCTCCACCTCCCTCCCGGA	LONP1	ENSG00000196365.12	transcript	ENST00000360614.8	protein_coding	8/17			chr19	TogoVar
LPCAT2_chr16_55504072_55591666	55576446	ATAGACTG others(42): Show ATAGACTGACTGACTGACGCCAAAGTGGAATTATTTGTAAGGCCAGGGAG	A A	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG01106.hp2	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0033 a0002c0001t0033	a0002c0001t0033g0143 a0002c0001t0033g0143	1	312	0.0032	-49	c.131 others(68): Show c.1314+1724_1314+1772delGACTGACTGACGCCAAAGTGGAATTA TTTGTAAGGCCAGGGAGTAGACT	LPCAT2	ENSG00000087253.13	transcript	ENST00000262134.10	protein_coding	12/13		INFO_REALIGN_3_PRIME	chr16	TogoVar
LRBA_chr4_150259435_151020284	150660062	CGTCCGGG others(42): Show CGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCT	C C	intron_variant intron_variant	MODIFIER	NA18962.hp2 NA18962.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0077 a0001c0001t0002g0077	1	178	0.0056	-49	c.592 others(70): Show c.5921+23440_5921+23488delAGGGCGGCTGGCCGGGCGGGGGGC TGACCCCCCCACCTCCCTCCCGGAC	LRBA	ENSG00000198589.15	transcript	ENST00000651943.2	protein_coding	37/56			chr4	TogoVar
LRCH3_chr3_197786254_197893436	197887402	TCCCCCAG others(42): Show TCCCCCAGCAGAGCCCTTCCCATCACTGAACAGTGTTGGCGGCTGAGAGC	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0003 a0003	a0003c0010 a0003c0010	a0003c0010t0060 a0003c0010t0060	a0003c0010t0060g0007 a0003c0010t0060g0007	1	289	0.0035	-49	c.37 others(60): Show c.3765_*3813delACAGTGTTGGCGGCTGAGAGCCCCCCAGCAGAGC CCTTCCCATCACTGA	LRCH3	ENSG00000186001.14	transcript	ENST00000425562.7	protein_coding	21/21	3765	INFO_REALIGN_3_PRIME	chr3	TogoVar
LRCH3_chr3_197786254_197893436	197887489	GGGCTGAG others(42): Show GGGCTGAGAGCCCCCCAGCAGAGCCCTTCCCATCACTGAACAGTGTTGGC	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00544.hp1 HG00558.hp1 HG00733.hp1 others(42): Show HG00544.hp1 HG00558.hp1 HG00733.hp1 HG00733.hp2 HG00738.hp1 HG01123.hp1 HG01167.hp1 HG01169.hp2 HG01255.hp1 HG01515.hp1 HG01884.hp2 HG01928.hp2 HG01934.hp1 HG01981.hp1 HG02071.hp1 HG02080.hp1 HG02129.hp1 HG02135.hp2 HG02148.hp1 HG02155.hp2 HG02523.hp1 HG02572.hp1 HG02615.hp2 HG02647.hp2 HG02723.hp1 HG02723.hp2 HG02886.hp2 HG03225.hp2 HG03453.hp2 HG03579.hp2 HG03654.hp1 HG03669.hp2 HG03927.hp2 HG04204.hp1 NA18612.hp2 NA18906.hp2 NA18941.hp2 NA18948.hp1 NA18988.hp1 NA18988.hp2 NA19009.hp1 NA19057.hp2 NA19058.hp1 NA19240.hp1 NA20905.hp2	a0001 a0002 a0005 others(2): Show a0001 a0002 a0005 a0006 a0010	a0001c0001 a0001c0002 a0002c0003 others(5): Show a0001c0001 a0001c0002 a0002c0003 a0002c0006 a0002c0017 a0005c0015 a0006c0014 a0010c0013	a0001c0001t0002 a0001c0001t0009 a0001c0001t0032 others(17): Show a0001c0001t0002 a0001c0001t0009 a0001c0001t0032 a0001c0001t0036 a0001c0002t0009 a0002c0003t0002 a0002c0003t0009 a0002c0003t0013 a0002c0003t0020 a0002c0003t0028 a0002c0003t0031 a0002c0003t0039 a0002c0003t0055 a0002c0006t0018 a0002c0006t0019 a0002c0006t0047 a0002c0017t0020 a0005c0015t0013 a0006c0014t0009 a0010c0013t0018	a0001c0001t0002g0006 a0001c0001t0002g0018 a0001c0001t0002g0059 others(42): Show a0001c0001t0002g0006 a0001c0001t0002g0018 a0001c0001t0002g0059 a0001c0001t0002g0119 a0001c0001t0002g0131 a0001c0001t0002g0228 a0001c0001t0002g0230 a0001c0001t0002g0231 a0001c0001t0002g0288 a0001c0001t0009g0068 a0001c0001t0009g0110 a0001c0001t0032g0190 a0001c0001t0036g0122 a0001c0002t0009g0285 a0002c0003t0002g0013 a0002c0003t0002g0053 a0002c0003t0002g0075 a0002c0003t0002g0078 a0002c0003t0002g0092 a0002c0003t0002g0111 a0002c0003t0002g0115 a0002c0003t0002g0138 a0002c0003t0002g0157 a0002c0003t0002g0172 a0002c0003t0002g0270 a0002c0003t0002g0286 a0002c0003t0002g0287 a0002c0003t0009g0050 a0002c0003t0009g0239 a0002c0003t0013g0147 a0002c0003t0013g0184 a0002c0003t0013g0236 a0002c0003t0020g0215 a0002c0003t0028g0183 a0002c0003t0031g0088 a0002c0003t0039g0011 a0002c0003t0055g0031 a0002c0006t0018g0142 a0002c0006t0019g0263 a0002c0006t0019g0280 a0002c0006t0047g0048 a0002c0017t0020g0102 a0005c0015t0013g0274 a0006c0014t0009g0223 a0010c0013t0018g0173	45	289	0.1557	-49	c.38 others(60): Show c.3862_*3910delACAGTGTTGGCGGCTGAGAGCCCCCCAGCAGAGC CCTTCCCATCACTGA	LRCH3	ENSG00000186001.14	transcript	ENST00000425562.7	protein_coding	21/21	3862	INFO_REALIGN_3_PRIME	chr3	TogoVar
LRCH3_chr3_197786254_197893436	197887694	GCCCCCCA others(42): Show GCCCCCCAGCAGAGCCCTTCCCATCACTGACAGTGTCTGGGGCTGAGAGC	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01106.hp1 HG01106.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0059 a0001c0004t0059	a0001c0004t0059g0003 a0001c0004t0059g0003	1	290	0.0034	-49	c.40 others(60): Show c.4034_*4082delCAGCAGAGCCCTTCCCATCACTGACAGTGTCTGG GGCTGAGAGCCCCCC	LRCH3	ENSG00000186001.14	transcript	ENST00000425562.7	protein_coding	21/21	4034	INFO_REALIGN_3_PRIME	chr3	TogoVar
LRFN5_chr14_41601876_41909549	41674499	GGGGGGCT others(42): Show GGGGGGCTGACCCCTCCACCTCTCTCCAGGACGGGGCGGCTGGCCGGGCA	G G	intron_variant intron_variant	MODIFIER	HG02818.hp1 HG03516.hp2 NA18522.hp2 HG02818.hp1 HG03516.hp2 NA18522.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0009 a0001c0001t0004 a0001c0001t0009	a0001c0001t0004g0124 a0001c0001t0004g0125 a0001c0001t0009g0140 a0001c0001t0004g0124 a0001c0001t0004g0125 a0001c0001t0009g0140	3	278	0.0108	-49	c.-19 others(70): Show c.-197+65951_-197+65999delTCCACCTCTCTCCAGGACGGGGCG GCTGGCCGGGCAGGGGGCTGACCCC	LRFN5	ENSG00000165379.14	transcript	ENST00000298119.9	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr14	TogoVar
LRFN5_chr14_41601876_41909549	41674513	TCCACCTC others(42): Show TCCACCTCTCTCCAGGACGGGGCGGCTGGCCGGGCAGGGGGCTGACCCCC	T T	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02922.hp1 HG02970.hp1 others(1): Show HG02055.hp1 HG02922.hp1 HG02970.hp1 HG03486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0071 a0001c0001t0005g0072 a0001c0001t0005g0082 others(1): Show a0001c0001t0005g0071 a0001c0001t0005g0072 a0001c0001t0005g0082 a0001c0001t0005g0090	4	276	0.0145	-49	c.-19 others(70): Show c.-197+66008_-197+66056delTCTCCAGGACGGGGCGGCTGGCCG GGCAGGGGGCTGACCCCCCCACCTC	LRFN5	ENSG00000165379.14	transcript	ENST00000298119.9	protein_coding	1/5		INFO_REALIGN_3_PRIME	chr14	TogoVar
LRIG2_chr1_113068198_113137260	113069433	CGGCCAGC others(42): Show CGGCCAGCCGTGCCATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(105): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00280.hp2 HG00544.hp1 HG00609.hp2 HG00639.hp1 HG00639.hp2 HG00673.hp2 HG00735.hp2 HG00738.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01099.hp1 HG01109.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01358.hp2 HG01361.hp1 HG01433.hp2 HG01496.hp1 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01884.hp2 HG01891.hp1 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01952.hp1 HG01975.hp2 HG01993.hp1 HG01993.hp2 HG02056.hp1 HG02071.hp1 HG02165.hp1 HG02165.hp2 HG02273.hp1 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02559.hp2 HG02602.hp1 HG02602.hp2 HG02622.hp1 HG02683.hp1 HG02683.hp2 HG02735.hp1 HG02735.hp2 HG02818.hp1 HG02886.hp1 HG02896.hp1 HG02897.hp1 HG03017.hp1 HG03098.hp2 HG03239.hp2 HG03704.hp1 HG03704.hp2 HG03831.hp1 HG03942.hp2 HG04184.hp1 HG04228.hp2 HG06807.hp2 NA18747.hp1 NA18747.hp2 NA18940.hp1 NA18945.hp2 NA18946.hp1 NA18948.hp2 NA18951.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18960.hp2 NA18961.hp1 NA18964.hp1 NA18965.hp1 NA18965.hp2 NA18972.hp2 NA18985.hp1 NA18986.hp2 NA18991.hp2 NA18993.hp2 NA19002.hp1 NA19005.hp2 NA19011.hp1 NA19030.hp1 NA19057.hp1 NA19079.hp2 NA19081.hp2 NA19083.hp2 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA20129.hp1 NA20805.hp1 NA20905.hp1 NA20905.hp2	a0001 a0003 a0004 a0001 a0003 a0004	a0001c0001 a0001c0008 a0003c0004 others(1): Show a0001c0001 a0001c0008 a0003c0004 a0004c0007	a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 others(29): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 a0001c0001t0007 a0001c0001t0009 a0001c0001t0011 a0001c0001t0012 a0001c0001t0013 a0001c0001t0014 a0001c0001t0015 a0001c0001t0016 a0001c0001t0020 a0001c0001t0021 a0001c0001t0028 a0001c0001t0030 a0001c0001t0032 a0001c0001t0034 a0001c0001t0036 a0001c0001t0037 a0001c0001t0038 a0001c0001t0039 a0001c0001t0057 a0001c0001t0058 a0001c0001t0059 a0001c0001t0060 a0001c0001t0063 a0001c0001t0064 a0001c0001t0065 a0001c0001t0068 a0001c0008t0001 a0003c0004t0001 a0004c0007t0061	a0001c0001t0001g0002 a0001c0001t0001g0010 a0001c0001t0001g0011 others(104): Show a0001c0001t0001g0002 a0001c0001t0001g0010 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0026 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0040 a0001c0001t0001g0042 a0001c0001t0001g0044 a0001c0001t0001g0046 a0001c0001t0001g0051 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0063 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0095 a0001c0001t0001g0102 a0001c0001t0001g0109 a0001c0001t0001g0112 a0001c0001t0003g0105 a0001c0001t0003g0107 a0001c0001t0006g0017 a0001c0001t0006g0022 a0001c0001t0006g0029 a0001c0001t0006g0041 a0001c0001t0006g0045 a0001c0001t0006g0049 a0001c0001t0006g0110 a0001c0001t0006g0111 a0001c0001t0007g0018 a0001c0001t0007g0065 a0001c0001t0007g0084 a0001c0001t0007g0090 a0001c0001t0007g0091 a0001c0001t0007g0092 a0001c0001t0007g0113 a0001c0001t0009g0064 a0001c0001t0009g0097 a0001c0001t0009g0098 a0001c0001t0009g0099 a0001c0001t0009g0100 a0001c0001t0011g0103 a0001c0001t0012g0050 a0001c0001t0012g0056 a0001c0001t0012g0057 a0001c0001t0013g0009 a0001c0001t0013g0013 a0001c0001t0013g0055 a0001c0001t0014g0094 a0001c0001t0015g0007 a0001c0001t0015g0074 a0001c0001t0015g0077 a0001c0001t0016g0003 a0001c0001t0016g0104 a0001c0001t0016g0108 a0001c0001t0020g0020 a0001c0001t0020g0093 a0001c0001t0021g0003 a0001c0001t0021g0081 a0001c0001t0028g0047 a0001c0001t0028g0048 a0001c0001t0030g0006 a0001c0001t0032g0027 a0001c0001t0034g0101 a0001c0001t0036g0096 a0001c0001t0037g0019 a0001c0001t0038g0089 a0001c0001t0039g0025 a0001c0001t0057g0053 a0001c0001t0058g0052 a0001c0001t0059g0043 a0001c0001t0060g0062 a0001c0001t0063g0054 a0001c0001t0064g0014 a0001c0001t0065g0035 a0001c0001t0068g0021 a0001c0008t0001g0078 a0003c0004t0001g0008 a0004c0007t0061g0039	108	266	0.4060	-49	c.-39 others(60): Show c.-3973_-3925delGGCCAGCCGTGCCATCCGGGAGGGAGGTGGGGGG GTCAGCCCCCCGCCT	LRIG2	ENSG00000198799.12	transcript	ENST00000361127.6	protein_coding		3764		chr1	TogoVar
LRIG2_chr1_113068198_113137260	113070008	TGCCCGGC others(42): Show TGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01261.hp1 HG02056.hp1 NA18965.hp2 HG01261.hp1 HG02056.hp1 NA18965.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0006 a0001c0001t0013 a0001c0001t0001 a0001c0001t0006 a0001c0001t0013	a0001c0001t0001g0011 a0001c0001t0006g0111 a0001c0001t0013g0013 a0001c0001t0001g0011 a0001c0001t0006g0111 a0001c0001t0013g0013	3	266	0.0113	-49	c.-33 others(60): Show c.-3398_-3350delGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGG GGGGGTCGGCCCCCC	LRIG2	ENSG00000198799.12	transcript	ENST00000361127.6	protein_coding		3189		chr1	TogoVar
LRIG2_chr1_113068198_113137260	113070101	CCCCCCGC others(42): Show CCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGGTCAG	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01261.hp2 HG01934.hp2 HG01261.hp2 HG01934.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0037 a0001c0001t0007 a0001c0001t0037	a0001c0001t0007g0018 a0001c0001t0037g0019 a0001c0001t0007g0018 a0001c0001t0037g0019	2	266	0.0075	-49	c.-33 others(60): Show c.-3305_-3257delCCCCCGCCCGGCCAGCCGCCCCGTCCGGGAGGGA GGTGGGGGGGGTCAG	LRIG2	ENSG00000198799.12	transcript	ENST00000361127.6	protein_coding		3096		chr1	TogoVar
LRIG2_chr1_113068198_113137260	113070235	TGCCCGGC others(42): Show TGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGGGGGGGTCGGCCCCCC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02886.hp1 HG02886.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0015 a0001c0001t0015	a0001c0001t0015g0077 a0001c0001t0015g0077	1	182	0.0055	-49	c.-31 others(60): Show c.-3171_-3123delGCCCGGCCAGCCGCCCCGTCCGGGAGGGAGGTGG GGGGGTCGGCCCCCC	LRIG2	ENSG00000198799.12	transcript	ENST00000361127.6	protein_coding		2962		chr1	TogoVar
LRMDA_chr10_75426624_76565168	75878273	GGTTTTAT others(42): Show GGTTTTATTGAGTGGTAGAAGTAGCTCTCGGTGAGGTGGATGGGTGCAAA	G G	intron_variant intron_variant	MODIFIER	HG03486.hp2 NA18906.hp1 HG03486.hp2 NA18906.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0006 a0001c0002t0005 a0001c0002t0006	a0001c0002t0005g0032 a0001c0002t0006g0020 a0001c0002t0005g0032 a0001c0002t0006g0020	2	46	0.0435	-49	c.132 others(70): Show c.132-157706_132-157658delGGTGAGGTGGATGGGTGCAAAGTT TTATTGAGTGGTAGAAGTAGCTCTC	LRMDA	ENSG00000148655.16	transcript	ENST00000611255.5	protein_coding	2/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRMDA_chr10_75426624_76565168	75984195	TAAGTACT others(42): Show TAAGTACTGGCCGTATGGCTGGAGAAAGCTGCCCTGGGTCCTGCAAGGCC	T T	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG03139.hp2 HG03471.hp1 others(3): Show HG02145.hp2 HG03139.hp2 HG03471.hp1 NA18906.hp1 NA19043.hp1 NA19240.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0002c0003 a0001c0002 a0002c0003	a0001c0002t0002 a0001c0002t0003 a0001c0002t0006 others(3): Show a0001c0002t0002 a0001c0002t0003 a0001c0002t0006 a0001c0002t0019 a0002c0003t0009 a0002c0003t0017	a0001c0002t0002g0019 a0001c0002t0003g0004 a0001c0002t0006g0020 others(3): Show a0001c0002t0002g0019 a0001c0002t0003g0004 a0001c0002t0006g0020 a0001c0002t0019g0045 a0002c0003t0009g0024 a0002c0003t0017g0042	6	46	0.1304	-49	c.132 others(68): Show c.132-51811_132-51763delAGTACTGGCCGTATGGCTGGAGAAAG CTGCCCTGGGTCCTGCAAGGCCA	LRMDA	ENSG00000148655.16	transcript	ENST00000611255.5	protein_coding	2/6		INFO_REALIGN_3_PRIME	chr10	TogoVar
LRP2_chr2_169122109_169367534	169327059	GCAGCCGC others(42): Show GCAGCCGCCCAGTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGC	G G	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0045 a0045	a0045c0118 a0045c0118	a0045c0118t0003 a0045c0118t0003	a0045c0118t0003g0139 a0045c0118t0003g0139	1	248	0.0040	-49	c.80- others(64): Show c.80-6224_80-6176delGCCGGGCGGGGGGCTGACCCCCCCACCTCC CTCCCGGACTGGGCGGCTG	LRP2	ENSG00000081479.15	transcript	ENST00000649046.1	protein_coding	1/78			chr2	TogoVar
LRP2_chr2_169122109_169367534	169327070	GTCCGGGA others(42): Show GTCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCA	G G	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG03516.hp1 HG03579.hp2 HG01884.hp2 HG03516.hp1 HG03579.hp2	a0003 a0003	a0003c0019 a0003c0028 a0003c0059 a0003c0019 a0003c0028 a0003c0059	a0003c0019t0004 a0003c0028t0004 a0003c0059t0013 a0003c0019t0004 a0003c0028t0004 a0003c0059t0013	a0003c0019t0004g0234 a0003c0028t0004g0240 a0003c0059t0013g0232 a0003c0019t0004g0234 a0003c0028t0004g0240 a0003c0059t0013g0232	3	248	0.0121	-49	c.80- others(64): Show c.80-6235_80-6187delTGGGGCGGCTGGCCGGGCGGGGGGCTGACC CCCCCACCTCCCTCCCGGA	LRP2	ENSG00000081479.15	transcript	ENST00000649046.1	protein_coding	1/78			chr2	TogoVar
LRP2_chr2_169122109_169367534	169327119	ATCCGGGA others(42): Show ATCCGGGAGGGAGGTGGGGGGGTCAGCCCCCCGCCCGGCCAGCCGCCCCG	A A	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG01070.hp1 HG01071.hp2 others(3): Show HG00323.hp2 HG01070.hp1 HG01071.hp2 HG01257.hp2 HG01258.hp1 HG01361.hp2	a0001 a0018 a0032 others(1): Show a0001 a0018 a0032 a0033	a0001c0017 a0001c0039 a0018c0085 others(2): Show a0001c0017 a0001c0039 a0018c0085 a0032c0084 a0033c0038	a0001c0017t0001 a0001c0039t0001 a0018c0085t0001 others(2): Show a0001c0017t0001 a0001c0039t0001 a0018c0085t0001 a0032c0084t0005 a0033c0038t0017	a0001c0017t0001g0066 a0001c0017t0001g0067 a0001c0039t0001g0060 others(3): Show a0001c0017t0001g0066 a0001c0017t0001g0067 a0001c0039t0001g0060 a0018c0085t0001g0112 a0032c0084t0005g0087 a0033c0038t0017g0069	6	248	0.0242	-49	c.80- others(64): Show c.80-6284_80-6236delCGGGGCGGCTGGCCGGGCGGGGGGCTGACC CCCCCACCTCCCTCCCGGA	LRP2	ENSG00000081479.15	transcript	ENST00000649046.1	protein_coding	1/78			chr2	TogoVar

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