regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
CHRM2_chr7_136863652_137025213 | 136987885 | CTTATT | C | intron_variant | MODIFIER | HG02895.hp2 HG03139.hp2 HG03516.hp2 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0013a0001c0001t0014a0001c0001t0023others(1): Show | a0001c0001t0013g0068a0001c0001t0013g0069a0001c0001t0013g0070others(4): Show | 7 | 320 | 0.0219 | -5 | c.-12 others(24): Show |
CHRM2 | ENSG00000181072.12 | transcript | ENST00000680005.1 | protein_coding | 2/3 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHRM2_chr7_136863652_137025213 | 137012054 | GAATAT | G | intron_variant | MODIFIER | HG02615.hp2 HG02723.hp1 HG02809.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0018a0001c0001t0047 | a0001c0001t0018g0041a0001c0001t0018g0217a0001c0001t0018g0311others(1): Show | 4 | 320 | 0.0125 | -5 | c.-46 others(22): Show |
CHRM2 | ENSG00000181072.12 | transcript | ENST00000680005.1 | protein_coding | 3/3 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHRM3_chr1_239381568_239920450 | 239404718 | AAATAT | A | intron_variant | MODIFIER | HG02451.hp1 HG02970.hp1 |
a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0041a0001c0001t0005g0077 | 2 | 116 | 0.0172 | -5 | c.-52 others(26): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
CHRM3_chr1_239381568_239920450 | 239426485 | AGAAAG | A | intron_variant | MODIFIER | HG01106.hp2 HG02109.hp1 HG02615.hp1 others(8): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0012a0001c0001t0013others(8): Show | a0001c0001t0003g0115a0001c0001t0012g0028a0001c0001t0013g0085others(8): Show | 11 | 116 | 0.0948 | -5 | c.-52 others(26): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 1/6 | chr1 | TogoVar | ||||||
CHRM3_chr1_239381568_239920450 | 239488714 | CAAAAA | C | intron_variant | MODIFIER | HG00639.hp1 HG01981.hp2 HG02109.hp1 others(4): Show |
a0001a0003 | a0001c0001a0001c0005a0003c0004 | a0001c0001t0001a0001c0001t0015a0001c0001t0018others(4): Show | a0001c0001t0001g0054a0001c0001t0015g0033a0001c0001t0018g0022others(4): Show | 7 | 116 | 0.0603 | -5 | c.-52 others(24): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
CHRM3_chr1_239381568_239920450 | 239618465 | GTAGTA | G | intron_variant | MODIFIER | HG00140.hp2 HG00609.hp2 HG00639.hp2 others(21): Show |
a0001 | a0001c0001a0001c0005 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(13): Show | a0001c0001t0001g0005a0001c0001t0001g0010a0001c0001t0001g0109others(21): Show | 24 | 116 | 0.2069 | -5 | c.-31 others(26): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
CHRM3_chr1_239381568_239920450 | 239649484 | ATTCAG | A | intron_variant | MODIFIER | HG00438.hp2 HG00639.hp1 HG01109.hp2 others(26): Show |
a0001a0003a0004 | a0001c0001a0003c0004a0004c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(19): Show | a0001c0001t0001g0013a0001c0001t0001g0052a0001c0001t0001g0056others(26): Show | 29 | 116 | 0.2500 | -5 | c.-25 others(26): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 4/6 | chr1 | TogoVar | ||||||
CHRM3_chr1_239381568_239920450 | 239706160 | ATATAT | A | intron_variant | MODIFIER | NA18939.hp1 NA19012.hp1 |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0017 | a0001c0001t0002g0048a0001c0001t0017g0050 | 2 | 116 | 0.0172 | -5 | c.-14 others(26): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
CHRM3_chr1_239381568_239920450 | 239847945 | AGGAGG | A | intron_variant | MODIFIER | HG02723.hp2 HG02818.hp1 HG03195.hp1 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0009a0001c0001t0018others(3): Show | a0001c0001t0003g0039a0001c0001t0009g0111a0001c0001t0018g0022others(3): Show | 6 | 116 | 0.0517 | -5 | c.-20 others(24): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 6/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
CHRM5_chr15_33963497_34072458 | 33968099 | TAAAAA | T | upstream_gene_variant | MODIFIER | HG02486.hp2 HG03540.hp2 NA18943.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0021a0001c0001t0023a0001c0001t0028 | a0001c0001t0021g0117a0001c0001t0021g0118a0001c0001t0021g0119others(3): Show | 6 | 338 | 0.0178 | -5 | c.-14 others(16): Show |
CHRM5 | ENSG00000184984.10 | transcript | ENST00000383263.7 | protein_coding | 397 | chr15 | TogoVar | ||||||
CHRM5_chr15_33963497_34072458 | 33975932 | GAAGAA | G | intron_variant | MODIFIER | HG01109.hp1 HG01891.hp1 HG02145.hp1 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004a0001c0001t0026others(2): Show | a0001c0001t0001g0067a0001c0001t0001g0069a0001c0001t0001g0071others(4): Show | 7 | 338 | 0.0207 | -5 | c.-40 others(24): Show |
CHRM5 | ENSG00000184984.10 | transcript | ENST00000383263.7 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
CHRM5_chr15_33963497_34072458 | 33986099 | TTTTTG | T | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(299): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0001c0006others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(37): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0069others(295): Show | 302 | 338 | 0.8935 | -5 | c.-40 others(26): Show |
CHRM5 | ENSG00000184984.10 | transcript | ENST00000383263.7 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
CHRM5_chr15_33963497_34072458 | 34008914 | TTAAGA | T | intron_variant | MODIFIER | HG00558.hp2 HG00642.hp1 HG01168.hp1 others(36): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(2): Show | a0001c0001t0001g0141a0001c0001t0001g0180a0001c0001t0001g0181others(36): Show | 39 | 338 | 0.1154 | -5 | c.-40 others(26): Show |
CHRM5 | ENSG00000184984.10 | transcript | ENST00000383263.7 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
CHRM5_chr15_33963497_34072458 | 34014380 | AAAAAC | A | intron_variant | MODIFIER | HG01109.hp1 HG01168.hp2 HG01169.hp2 others(12): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0005a0001c0002t0008 | a0001c0001t0001g0069a0001c0001t0001g0071a0001c0001t0001g0173others(12): Show | 15 | 338 | 0.0444 | -5 | c.-40 others(26): Show |
CHRM5 | ENSG00000184984.10 | transcript | ENST00000383263.7 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
CHRM5_chr15_33963497_34072458 | 34017267 | ACAAAG | A | intron_variant | MODIFIER | HG01168.hp2 HG01169.hp2 HG01257.hp2 others(10): Show |
a0001 | a0001c0002 | a0001c0002t0005a0001c0002t0008 | a0001c0002t0005g0075a0001c0002t0005g0101a0001c0002t0005g0102others(10): Show | 13 | 338 | 0.0385 | -5 | c.-40 others(26): Show |
CHRM5 | ENSG00000184984.10 | transcript | ENST00000383263.7 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
CHRM5_chr15_33963497_34072458 | 34039207 | AGCGGG | A | intron_variant | MODIFIER | HG02886.hp1 HG03209.hp2 HG03225.hp1 others(4): Show |
a0001 | a0001c0001a0001c0009 | a0001c0001t0013a0001c0001t0026a0001c0001t0031others(1): Show | a0001c0001t0013g0032a0001c0001t0013g0033a0001c0001t0013g0038others(4): Show | 7 | 338 | 0.0207 | -5 | c.-40 others(24): Show |
CHRM5 | ENSG00000184984.10 | transcript | ENST00000383263.7 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
CHRNA10_chr11_3660587_3676384 | 3663089 | ATCATC | A | downstream_gene_variant | MODIFIER | HG00738.hp1 HG01258.hp1 HG02109.hp2 others(12): Show |
a0001a0003 | a0001c0001a0003c0005 | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(1): Show | a0001c0001t0001g0001a0001c0001t0001g0004a0001c0001t0001g0031others(6): Show | 15 | 450 | 0.0333 | -5 | c.*30 others(16): Show |
CHRNA10 | ENSG00000129749.3 | transcript | ENST00000250699.2 | protein_coding | 2497 | chr11 | TogoVar | ||||||
CHRNA10_chr11_3660587_3676384 | 3673837 | CAAAAA | C | upstream_gene_variant | MODIFIER | HG00140.hp2 HG00280.hp2 HG00735.hp1 others(11): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0002c0002t0006 | a0001c0001t0001g0001a0002c0002t0006g0019a0002c0002t0006g0020 | 14 | 450 | 0.0311 | -5 | c.-25 others(16): Show |
CHRNA10 | ENSG00000129749.3 | transcript | ENST00000250699.2 | protein_coding | 2454 | chr11 | TogoVar | ||||||
CHRNA1_chr2_174742592_174769472 | 174766345 | TGAAAA | T | upstream_gene_variant | MODIFIER | HG02818.hp1 HG02895.hp2 HG03041.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0005 | a0001c0001t0001g0058a0001c0001t0001g0133a0001c0001t0002g0059others(1): Show | 4 | 370 | 0.0108 | -5 | c.-19 others(16): Show |
CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 1874 | chr2 | TogoVar | ||||||
CHRNA1_chr2_174742592_174769472 | 174768159 | ATATAT | A | upstream_gene_variant | MODIFIER | NA18968.hp2 NA18974.hp1 NA19066.hp2 |
a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0003a0001c0002t0001g0075 | 3 | 370 | 0.0081 | -5 | c.-37 others(16): Show |
CHRNA1 | ENSG00000138435.16 | transcript | ENST00000348749.9 | protein_coding | 3688 | chr2 | TogoVar | ||||||
CHRNA3_chr15_78590309_78625996 | 78595271 | CTTTCT | C | downstream_gene_variant | MODIFIER | HG03491.hp1 HG03491.hp2 HG03492.hp1 |
a0002 | a0002c0002 | a0002c0002t0002 | a0002c0002t0002g0001a0002c0002t0002g0068a0002c0002t0002g0069 | 3 | 410 | 0.0073 | -5 | c.*13 others(16): Show |
CHRNA3 | ENSG00000080644.16 | transcript | ENST00000326828.6 | protein_coding | 37 | chr15 | TogoVar | ||||||
CHRNA3_chr15_78590309_78625996 | 78600540 | TTACTC | T | intron_variant | MODIFIER | HG01123.hp2 NA18975.hp1 NA19057.hp1 |
a0002 | a0002c0002a0002c0009 | a0002c0002t0005a0002c0009t0005 | a0002c0002t0005g0030a0002c0009t0005g0071 | 3 | 410 | 0.0073 | -5 | c.138 others(22): Show |
CHRNA3 | ENSG00000080644.16 | transcript | ENST00000326828.6 | protein_coding | 5/5 | chr15 | TogoVar | ||||||
CHRNA3_chr15_78590309_78625996 | 78621616 | TCAAAA | T | upstream_gene_variant | MODIFIER | HG00642.hp1 HG01256.hp1 HG01258.hp2 others(3): Show |
a0001 | a0001c0001a0001c0005a0001c0015 | a0001c0001t0001a0001c0005t0005a0001c0015t0017 | a0001c0001t0001g0045a0001c0001t0001g0212a0001c0001t0001g0216others(2): Show | 6 | 410 | 0.0146 | -5 | c.-82 others(14): Show |
CHRNA3 | ENSG00000080644.16 | transcript | ENST00000326828.6 | protein_coding | 621 | chr15 | TogoVar | ||||||
CHRNA5_chr15_78560520_78600269 | 78567263 | AAAAAG | A | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00140.hp2 others(52): Show |
a0001a0003a0004others(3): Show | a0001c0001a0003c0003a0004c0005others(3): Show | a0001c0001t0002a0001c0001t0008a0001c0001t0009others(10): Show | a0001c0001t0002g0154a0001c0001t0002g0155a0001c0001t0002g0156others(43): Show | 55 | 382 | 0.1440 | -5 | c.106 others(22): Show |
CHRNA5 | ENSG00000169684.13 | transcript | ENST00000299565.9 | protein_coding | 1/5 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
CHRNA5_chr15_78560520_78600269 | 78582491 | AAAAAG | A | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00140.hp2 others(69): Show |
a0001a0003a0004others(1): Show | a0001c0001a0003c0003a0004c0005others(1): Show | a0001c0001t0005a0001c0001t0007a0001c0001t0015others(9): Show | a0001c0001t0005g0001a0001c0001t0005g0034a0001c0001t0005g0211others(50): Show | 72 | 382 | 0.1885 | -5 | c.258 others(22): Show |
CHRNA5 | ENSG00000169684.13 | transcript | ENST00000299565.9 | protein_coding | 2/5 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
CHRNA7_chr15_32025515_32178018 | 32027719 | CCACTG | C | upstream_gene_variant | MODIFIER | HG00099.hp1 HG00438.hp1 HG00544.hp2 others(45): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(6): Show | a0001c0001t0001a0001c0001t0013a0001c0001t0027others(17): Show | a0001c0001t0001g0051a0001c0001t0001g0052a0001c0001t0001g0062others(44): Show | 48 | 307 | 0.1564 | -5 | c.-28 others(16): Show |
CHRNA7 | ENSG00000175344.19 | transcript | ENST00000306901.9 | protein_coding | 2795 | chr15 | TogoVar | ||||||
CHRNA7_chr15_32025515_32178018 | 32052197 | ATTTTT | A | intron_variant | MODIFIER | HG01169.hp1 HG01175.hp1 HG01358.hp2 others(4): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(4): Show | a0001c0001t0008a0001c0002t0002a0001c0003t0035others(4): Show | a0001c0001t0008g0118a0001c0002t0002g0181a0001c0003t0035g0024others(4): Show | 7 | 307 | 0.0228 | -5 | c.195 others(24): Show |
CHRNA7 | ENSG00000175344.19 | transcript | ENST00000306901.9 | protein_coding | 2/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
CHRNA7_chr15_32025515_32178018 | 32070669 | CTTTTT | C | intron_variant | MODIFIER | HG00408.hp1 HG00408.hp2 HG00438.hp2 others(88): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(8): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0008others(35): Show | a0001c0001t0001g0006a0001c0001t0001g0009a0001c0001t0001g0014others(87): Show | 91 | 307 | 0.2964 | -5 | c.196 others(24): Show |
CHRNA7 | ENSG00000175344.19 | transcript | ENST00000306901.9 | protein_coding | 2/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
CHRNA7_chr15_32025515_32178018 | 32119004 | AATAGT | A | intron_variant | MODIFIER | HG00741.hp1 HG01069.hp1 HG01069.hp2 others(21): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0016others(11): Show | a0001c0001t0001g0242a0001c0001t0003g0025a0001c0001t0003g0232others(21): Show | 24 | 307 | 0.0782 | -5 | c.350 others(22): Show |
CHRNA7 | ENSG00000175344.19 | transcript | ENST00000306901.9 | protein_coding | 4/9 | chr15 | TogoVar | ||||||
CHRNA7_chr15_32025515_32178018 | 32164913 | TAAAAA | T | intron_variant | MODIFIER | HG00323.hp1 HG01952.hp1 HG02895.hp2 others(4): Show |
a0001 | a0001c0001a0001c0005a0001c0008others(1): Show | a0001c0001t0001a0001c0001t0012a0001c0001t0013others(3): Show | a0001c0001t0001g0223a0001c0001t0001g0270a0001c0001t0012g0293others(4): Show | 7 | 307 | 0.0228 | -5 | c.990 others(22): Show |
CHRNA7 | ENSG00000175344.19 | transcript | ENST00000306901.9 | protein_coding | 9/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
CHRNA7_chr15_32025515_32178018 | 32166520 | TGATAA | T | intron_variant | MODIFIER | HG01081.hp1 HG01169.hp1 HG02258.hp1 others(4): Show |
a0001 | a0001c0001a0001c0011 | a0001c0001t0013a0001c0001t0053a0001c0001t0054others(2): Show | a0001c0001t0013g0204a0001c0001t0013g0205a0001c0001t0053g0081others(4): Show | 7 | 307 | 0.0228 | -5 | c.991 others(22): Show |
CHRNA7 | ENSG00000175344.19 | transcript | ENST00000306901.9 | protein_coding | 9/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | |||||
CHRNA9_chr4_40330333_40360217 | 40339279 | CAAAAA | C | intron_variant | MODIFIER | NA18948.hp2 NA18954.hp1 NA18955.hp2 others(3): Show |
a0002 | a0002c0003 | a0002c0003t0001 | a0002c0003t0001g0205a0002c0003t0001g0206a0002c0003t0001g0207others(3): Show | 6 | 420 | 0.0143 | -5 | c.365 others(22): Show |
CHRNA9 | ENSG00000174343.6 | transcript | ENST00000310169.3 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
CHRNA9_chr4_40330333_40360217 | 40352876 | GGTCAA | G | intron_variant | MODIFIER | HG02559.hp2 HG02622.hp1 HG02647.hp1 others(6): Show |
a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0022a0001c0002t0001g0041a0001c0002t0001g0042others(2): Show | 9 | 420 | 0.0214 | -5 | c.899 others(22): Show |
CHRNA9 | ENSG00000174343.6 | transcript | ENST00000310169.3 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
CHRNB2_chr1_154562778_154585013 | 154574056 | ATCTTG | A | intron_variant | MODIFIER | HG04228.hp1 NA19056.hp1 NA19057.hp1 |
a0001 | a0001c0001a0001c0004 | a0001c0001t0007a0001c0001t0030a0001c0004t0001 | a0001c0001t0007g0011a0001c0001t0030g0011a0001c0004t0001g0011 | 3 | 424 | 0.0071 | -5 | c.133 others(24): Show |
CHRNB2 | ENSG00000160716.6 | transcript | ENST00000368476.4 | protein_coding | 5/5 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
CHRNB3_chr8_42692366_42742407 | 42721722 | CAAACA | C | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(205): Show |
a0001 | a0001c0001a0001c0005 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(8): Show | a0001c0001t0001g0002a0001c0001t0001g0003a0001c0001t0001g0013others(200): Show | 208 | 282 | 0.7376 | -5 | c.250 others(22): Show |
CHRNB3 | ENSG00000147432.7 | transcript | ENST00000289957.3 | protein_coding | 3/5 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
CHRNB4_chr15_78619111_78646210 | 78621616 | TCAAAA | T | downstream_gene_variant | MODIFIER | HG01256.hp1 HG01258.hp2 HG01975.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0007 | a0001c0001t0001g0018a0001c0001t0001g0156a0001c0001t0007g0176others(1): Show | 5 | 416 | 0.0120 | -5 | c.*35 others(16): Show |
CHRNB4 | ENSG00000117971.12 | transcript | ENST00000261751.8 | protein_coding | 2494 | chr15 | TogoVar | ||||||
CHRND_chr2_232521160_232541664 | 232531946 | CAAAAA | C | intron_variant | MODIFIER | HG00099.hp2 HG00280.hp1 HG00323.hp1 others(95): Show |
a0001a0002a0008others(1): Show | a0001c0001a0001c0002a0001c0013others(3): Show | a0001c0001t0002a0001c0001t0012a0001c0002t0002others(7): Show | a0001c0001t0002g0012a0001c0001t0012g0012a0001c0002t0002g0001others(22): Show | 98 | 438 | 0.2237 | -5 | c.104 others(22): Show |
CHRND | ENSG00000135902.10 | transcript | ENST00000258385.8 | protein_coding | 9/11 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
CHST10_chr2_100386860_100422668 | 100408130 | TTAGTA | T | intron_variant | MODIFIER | HG00423.hp1 HG00544.hp2 HG00735.hp1 others(79): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0003a0001c0007others(5): Show | a0001c0001t0003a0001c0001t0005a0001c0001t0018others(13): Show | a0001c0001t0003g0005a0001c0001t0003g0007a0001c0001t0003g0023others(34): Show | 82 | 364 | 0.2253 | -5 | c.-32 others(22): Show |
CHST10 | ENSG00000115526.11 | transcript | ENST00000264249.8 | protein_coding | 2/6 | chr2 | TogoVar | ||||||
CHST11_chr12_104451948_104767014 | 104546475 | AAAAAG | A | intron_variant | MODIFIER | HG00423.hp1 HG00438.hp2 HG00544.hp1 others(35): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(12): Show | a0001c0001t0001g0002a0001c0001t0001g0007a0001c0001t0001g0033others(35): Show | 38 | 240 | 0.1583 | -5 | c.119 others(24): Show |
CHST11 | ENSG00000171310.11 | transcript | ENST00000303694.6 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
CHST11_chr12_104451948_104767014 | 104633293 | TAAAAG | T | intron_variant | MODIFIER | HG01884.hp2 HG02451.hp1 HG02896.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0017a0001c0001t0060 | a0001c0001t0001g0211a0001c0001t0017g0015a0001c0001t0017g0065others(1): Show | 4 | 240 | 0.0167 | -5 | c.204 others(24): Show |
CHST11 | ENSG00000171310.11 | transcript | ENST00000303694.6 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
CHST11_chr12_104451948_104767014 | 104750428 | CTTTTT | C | intron_variant | MODIFIER | HG01109.hp1 HG01256.hp2 HG01517.hp1 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0051 | a0001c0001t0001g0078a0001c0001t0001g0099a0001c0001t0001g0100others(4): Show | 7 | 240 | 0.0292 | -5 | c.205 others(22): Show |
CHST11 | ENSG00000171310.11 | transcript | ENST00000303694.6 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
CHST12_chr7_2398611_2453484 | 2408362 | CAAAAA | C | intron_variant | MODIFIER | HG00423.hp1 HG00597.hp2 HG00639.hp1 others(76): Show |
a0001a0004 | a0001c0001a0004c0004 | a0001c0001t0007a0001c0001t0020a0001c0001t0021others(64): Show | a0001c0001t0007g0010a0001c0001t0007g0029a0001c0001t0007g0067others(74): Show | 79 | 344 | 0.2297 | -5 | c.-78 others(22): Show |
CHST12 | ENSG00000136213.10 | transcript | ENST00000618655.2 | protein_coding | 1/1 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHST12_chr7_2398611_2453484 | 2414111 | CTTCTT | C | intron_variant | MODIFIER | HG01256.hp1 HG01258.hp2 HG01261.hp1 others(3): Show |
a0003 | a0003c0003 | a0003c0003t0018a0003c0003t0035a0003c0003t0092others(2): Show | a0003c0003t0018g0119a0003c0003t0018g0155a0003c0003t0035g0153others(3): Show | 6 | 344 | 0.0174 | -5 | c.-78 others(24): Show |
CHST12 | ENSG00000136213.10 | transcript | ENST00000618655.2 | protein_coding | 1/1 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
CHST12_chr7_2398611_2453484 | 2434579 | TAAAAA | T | 3_prime_UTR_variant | MODIFIER | HG00544.hp1 HG00597.hp2 HG00738.hp2 others(56): Show |
a0001a0004 | a0001c0001a0001c0006a0004c0004 | a0001c0001t0007a0001c0001t0020a0001c0001t0021others(45): Show | a0001c0001t0007g0010a0001c0001t0007g0029a0001c0001t0007g0067others(54): Show | 59 | 344 | 0.1715 | -5 | c.*72 others(14): Show |
CHST12 | ENSG00000136213.10 | transcript | ENST00000618655.2 | protein_coding | 2/2 | 728 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||
CHST12_chr7_2398611_2453484 | 2452501 | TGCCCG | T | downstream_gene_variant | MODIFIER | HG01243.hp2 HG01346.hp1 HG02735.hp2 |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0197a0001c0001t0217a0002c0002t0003 | a0001c0001t0197g0236a0001c0001t0217g0241a0002c0002t0003g0287 | 3 | 344 | 0.0087 | -5 | c.*18 others(18): Show |
CHST12 | ENSG00000136213.10 | transcript | ENST00000618655.2 | protein_coding | 4018 | chr7 | TogoVar | ||||||
CHST12_chr7_2398611_2453484 | 2452552 | GCCCTC | G | downstream_gene_variant | MODIFIER | HG00408.hp1 HG00673.hp2 HG01943.hp2 others(31): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0006a0002c0002others(2): Show | a0001c0001t0010a0001c0001t0012a0001c0001t0025others(29): Show | a0001c0001t0010g0030a0001c0001t0012g0019a0001c0001t0025g0074others(31): Show | 34 | 344 | 0.0988 | -5 | c.*18 others(18): Show |
CHST12 | ENSG00000136213.10 | transcript | ENST00000618655.2 | protein_coding | 4069 | chr7 | TogoVar | ||||||
CHST6_chr16_75467052_75500441 | 75491191 | ATATAT | A | intron_variant | MODIFIER | HG02622.hp2 HG03688.hp2 HG03927.hp1 |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0011a0001c0001t0019 | a0001c0001t0005g0172a0001c0001t0011g0065a0001c0001t0019g0307 | 3 | 371 | 0.0081 | -5 | c.-92 others(22): Show |
CHST6 | ENSG00000183196.10 | transcript | ENST00000332272.9 | protein_coding | 1/2 | chr16 | TogoVar | ||||||
CHST7_chrX_46568765_46603496 | 46569843 | ACTTCT | A | upstream_gene_variant | MODIFIER | HG02155.hp1 HG02735.hp1 HG04115.hp1 others(2): Show |
a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0072a0001c0002t0001g0073a0001c0002t0001g0074others(2): Show | 5 | 311 | 0.0161 | -5 | c.-40 others(16): Show |
CHST7 | ENSG00000147119.4 | transcript | ENST00000276055.4 | protein_coding | 3921 | chrX | TogoVar | ||||||
CHST7_chrX_46568765_46603496 | 46598149 | CTGTCT | C | 3_prime_UTR_variant | MODIFIER | HG03139.hp1 | a0001 | a0001c0001 | a0001c0001t0006 | a0001c0001t0006g0132 | 1 | 311 | 0.0032 | -5 | c.*42 others(14): Show |
CHST7 | ENSG00000147119.4 | transcript | ENST00000276055.4 | protein_coding | 2/2 | 22760 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||
CHST8_chr19_33616953_33778506 | 33618501 | CTTCTT | C | upstream_gene_variant | MODIFIER | HG01106.hp1 HG01168.hp1 HG02630.hp2 others(6): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0001t0004a0001c0002t0001others(1): Show | a0001c0001t0001g0211a0001c0001t0001g0213a0001c0001t0001g0215others(6): Show | 9 | 254 | 0.0354 | -5 | c.-39 others(16): Show |
CHST8 | ENSG00000124302.13 | transcript | ENST00000650847.1 | protein_coding | 3451 | chr19 | TogoVar |