view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
CHM_chrX_85856180_86052558 | 85967663 | CAAATT | C | intron_variant | MODIFIER | HG02135.hp1 | a0001 | a0001c0003 | a0001c0003t0005 | a0001c0003t0005g0227 | 1 | 245 | 0.0041 | -5 | c.315 others(22): Show |
CHM | ENSG00000188419.14 | transcript | ENST00000357749.7 | protein_coding | 4/14 | chrX | TogoVar | |||||||
CHM_chrX_85856180_86052558 | 85973300 | CAAAAA | C | intron_variant | MODIFIER | HG00323.hp2 HG00597.hp1 HG01070.hp2 others(17): Show |
a0001a0005 | a0001c0002a0005c0011 | a0001c0002t0001a0001c0002t0002a0005c0011t0006 | a0001c0002t0001g0058 a0001c0002t0001g0067 a0001c0002t0002g0041 others(17): Show |
20 | 245 | 0.0816 | -5 | c.314 others(22): Show |
CHM | ENSG00000188419.14 | transcript | ENST00000357749.7 | protein_coding | 4/14 | chrX | TogoVar | |||||||
CHM_chrX_85856180_86052558 | 86018000 | AAACAC | A | intron_variant | MODIFIER | HG02630.hp2 | a0001 | a0001c0001 | a0001c0001t0008 | a0001c0001t0008g0188 | 1 | 245 | 0.0041 | -5 | c.116 others(22): Show |
CHM | ENSG00000188419.14 | transcript | ENST00000357749.7 | protein_coding | 2/14 | chrX | TogoVar | |||||||
CHM_chrX_85856180_86052558 | 86026102 | CTTTTT | C | intron_variant | MODIFIER | HG01891.hp1 HG02145.hp1 HG02280.hp2 others(8): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0008others(1): Show | a0001c0001t0001g0044 a0001c0001t0001g0202 a0001c0001t0001g0203 others(8): Show |
11 | 245 | 0.0449 | -5 | c.116 others(22): Show |
CHM | ENSG00000188419.14 | transcript | ENST00000357749.7 | protein_coding | 2/14 | chrX | TogoVar | |||||||
CHN1_chr2_174793809_175010381 | 174847773 | CAAAAA | C | intron_variant | MODIFIER | HG02615.hp2 HG02809.hp1 HG02922.hp2 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004a0001c0001t0016 | a0001c0001t0001g0211 a0001c0001t0004g0262 a0001c0001t0004g0263 others(6): Show |
9 | 276 | 0.0326 | -5 | c.550 others(20): Show |
CHN1 | ENSG00000128656.15 | transcript | ENST00000409900.9 | protein_coding | 6/12 | chr2 | TogoVar | |||||||
CHN2_chr7_29189775_29519328 | 29262933 | TTAAAA | T | intron_variant | MODIFIER | HG00323.hp2 HG00738.hp1 HG01069.hp2 others(26): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0003others(1): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(10): Show | a0001c0001t0001g0009 a0001c0001t0001g0012 a0001c0001t0001g0015 others(26): Show |
29 | 232 | 0.1250 | -5 | c.49+ others(22): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
CHN2_chr7_29189775_29519328 | 29270674 | TAATAA | T | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp2 others(161): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0005others(7): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(41): Show | a0001c0001t0001g0005 a0001c0001t0001g0026 a0001c0001t0001g0029 others(161): Show |
164 | 232 | 0.7069 | -5 | c.49+ others(22): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
CHN2_chr7_29189775_29519328 | 29336759 | CAAAAA | C | intron_variant | MODIFIER | HG01175.hp1 HG01192.hp2 HG02055.hp2 others(5): Show |
a0001a0003 | a0001c0001a0001c0005a0003c0007 | a0001c0001t0001a0001c0001t0006a0001c0001t0009others(4): Show | a0001c0001t0001g0120 a0001c0001t0001g0130 a0001c0001t0006g0039 others(5): Show |
8 | 232 | 0.0345 | -5 | c.50- others(22): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
CHN2_chr7_29189775_29519328 | 29351311 | ATTTGT | A | intron_variant | MODIFIER | HG00140.hp1 HG00323.hp2 HG00639.hp1 others(50): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0005others(5): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(18): Show | a0001c0001t0001g0005 a0001c0001t0001g0009 a0001c0001t0001g0015 others(50): Show |
53 | 232 | 0.2285 | -5 | c.50- others(20): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
CHN2_chr7_29189775_29519328 | 29377024 | GTTTTA | G | intron_variant | MODIFIER | HG01168.hp1 HG01169.hp1 HG01978.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0012 a0001c0001t0001g0140 a0001c0001t0001g0141 |
3 | 232 | 0.0129 | -5 | c.144 others(22): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 3/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
CHN2_chr7_29189775_29519328 | 29381052 | CATAAG | C | intron_variant | MODIFIER | NA18991.hp1 NA19012.hp1 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0003a0001c0002t0004 | a0001c0001t0003g0016 a0001c0002t0004g0042 |
2 | 232 | 0.0086 | -5 | c.145 others(24): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 3/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
CHN2_chr7_29189775_29519328 | 29381809 | CAAAAA | C | intron_variant | MODIFIER | HG01169.hp2 HG02145.hp1 HG02572.hp2 others(3): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0003 | a0001c0001t0001a0001c0002t0002a0001c0002t0003others(2): Show | a0001c0001t0001g0026 a0001c0002t0002g0078 a0001c0002t0002g0171 others(3): Show |
6 | 232 | 0.0259 | -5 | c.145 others(24): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 3/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
CHN2_chr7_29189775_29519328 | 29441346 | TAAAAG | T | intron_variant | MODIFIER | HG02258.hp2 HG02976.hp1 HG06807.hp1 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0006a0001c0002t0002 | a0001c0001t0006g0036 a0001c0002t0002g0150 a0001c0002t0002g0168 |
3 | 232 | 0.0129 | -5 | c.577 others(24): Show |
CHN2 | ENSG00000106069.26 | transcript | ENST00000222792.11 | protein_coding | 6/12 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
CHODL_chr21_18239833_18272370 | 18258479 | ATTTAT | A | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00140.hp2 others(83): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0022a0001c0001t0023others(1): Show | a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0018 others(66): Show |
86 | 402 | 0.2139 | -5 | c.547 others(22): Show |
CHODL | ENSG00000154645.14 | transcript | ENST00000299295.7 | protein_coding | 3/5 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | ||||||
CHORDC1_chr11_90195429_90228049 | 90203787 | CTGAAA | C | intron_variant | MODIFIER | HG00323.hp1 HG00642.hp2 HG01106.hp2 others(10): Show |
a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0014 a0001c0001t0005g0047 a0001c0001t0005g0128 others(5): Show |
13 | 412 | 0.0316 | -5 | c.670 others(20): Show |
CHORDC1 | ENSG00000110172.12 | transcript | ENST00000320585.11 | protein_coding | 8/10 | chr11 | TogoVar | |||||||
CHP1_chr15_41226268_41286887 | 41271254 | CAAAAA | C | intron_variant | MODIFIER | HG00099.hp2 HG00544.hp1 HG00558.hp2 others(54): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(10): Show | a0001c0001t0001g0178 a0001c0001t0001g0179 a0001c0001t0001g0181 others(54): Show |
57 | 298 | 0.1913 | -5 | c.411 others(20): Show |
CHP1 | ENSG00000187446.12 | transcript | ENST00000334660.10 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
CHP2_chr16_23750026_23763935 | 23750933 | CTTTCT | C | upstream_gene_variant | MODIFIER | HG01169.hp1 HG02135.hp2 HG02145.hp1 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 a0001c0001t0001g0002 |
6 | 392 | 0.0153 | -5 | c.-41 others(16): Show |
CHP2 | ENSG00000166869.3 | transcript | ENST00000300113.3 | protein_coding | 4092 | chr16 | TogoVar | |||||||
CHP2_chr16_23750026_23763935 | 23750937 | CTTTTT | C | upstream_gene_variant | MODIFIER | HG01069.hp1 HG01070.hp1 HG01071.hp1 others(27): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0004 | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 others(6): Show |
30 | 392 | 0.0765 | -5 | c.-41 others(16): Show |
CHP2 | ENSG00000166869.3 | transcript | ENST00000300113.3 | protein_coding | 4088 | chr16 | TogoVar | |||||||
CHPT1_chr12_101692640_101734074 | 101706809 | TCTTTA | T | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp2 HG00741.hp1 others(6): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0003t0001 | a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0063 others(5): Show |
9 | 402 | 0.0224 | -5 | c.274 others(22): Show |
CHPT1 | ENSG00000111666.11 | transcript | ENST00000229266.8 | protein_coding | 1/8 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
CHPT1_chr12_101692640_101734074 | 101731674 | TATAAA | T | downstream_gene_variant | MODIFIER | HG00544.hp1 HG00597.hp2 HG02056.hp2 others(52): Show |
a0001a0002a0003others(1): Show | a0001c0001a0002c0002a0002c0010others(2): Show | a0001c0001t0001a0001c0001t0004a0002c0002t0001others(3): Show | a0001c0001t0001g0004 a0001c0001t0001g0007 a0001c0001t0001g0011 others(30): Show |
55 | 402 | 0.1368 | -5 | c.*27 others(16): Show |
CHPT1 | ENSG00000111666.11 | transcript | ENST00000229266.8 | protein_coding | 2601 | chr12 | TogoVar | |||||||
CHRAC1_chr8_140506322_140522154 | 140513913 | CTTTTT | C | intron_variant | MODIFIER | HG01069.hp1 HG01099.hp2 HG01123.hp2 others(16): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0005a0001c0001t0006 | a0001c0001t0001g0006 a0001c0001t0001g0014 a0001c0001t0001g0043 others(3): Show |
19 | 424 | 0.0448 | -5 | c.148 others(20): Show |
CHRAC1 | ENSG00000104472.10 | transcript | ENST00000220913.10 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
CHRDL1_chrX_110668856_110800817 | 110669079 | TTTATA | T | downstream_gene_variant | MODIFIER | HG00741.hp1 HG00741.hp2 |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0029 | a0001c0001t0005g0158 a0001c0001t0029g0138 |
2 | 172 | 0.0116 | -5 | c.*71 others(16): Show |
CHRDL1 | ENSG00000101938.15 | transcript | ENST00000372042.6 | protein_coding | 4776 | chrX | TogoVar | |||||||
CHRDL1_chrX_110668856_110800817 | 110674500 | CACACA | C | 3_prime_UTR_variant | MODIFIER | HG02027.hp1 | a0001 | a0001c0001 | a0001c0001t0027 | a0001c0001t0027g0104 | 1 | 172 | 0.0058 | -5 | c.*17 others(16): Show |
CHRDL1 | ENSG00000101938.15 | transcript | ENST00000372042.6 | protein_coding | 12/12 | 1726 | chrX | TogoVar | ||||||
CHRDL1_chrX_110668856_110800817 | 110685886 | ATTTTT | A | intron_variant | MODIFIER | HG02280.hp2 | a0001 | a0001c0002 | a0001c0002t0004 | a0001c0002t0004g0012 | 1 | 172 | 0.0058 | -5 | c.988 others(22): Show |
CHRDL1 | ENSG00000101938.15 | transcript | ENST00000372042.6 | protein_coding | 9/11 | chrX | TogoVar | |||||||
CHRDL1_chrX_110668856_110800817 | 110689656 | CATCTA | C | intron_variant | MODIFIER | HG02886.hp1 | a0004 | a0004c0005 | a0004c0005t0050 | a0004c0005t0050g0072 | 1 | 172 | 0.0058 | -5 | c.779 others(20): Show |
CHRDL1 | ENSG00000101938.15 | transcript | ENST00000372042.6 | protein_coding | 8/11 | chrX | TogoVar | |||||||
CHRDL1_chrX_110668856_110800817 | 110767598 | CAATAA | C | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(111): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0002c0003others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(34): Show | a0001c0001t0001g0002 a0001c0001t0001g0025 a0001c0001t0001g0026 others(111): Show |
114 | 172 | 0.6628 | -5 | c.95- others(20): Show |
CHRDL1 | ENSG00000101938.15 | transcript | ENST00000372042.6 | protein_coding | 2/11 | chrX | TogoVar | |||||||
CHRD_chr3_184375054_184394829 | 184385666 | CAAAAA | C | intron_variant | MODIFIER | HG01109.hp1 HG01169.hp1 HG01255.hp1 others(31): Show |
a0002a0019a0021 | a0002c0002a0002c0004a0002c0011others(5): Show | a0002c0002t0001a0002c0004t0001a0002c0011t0001others(5): Show | a0002c0002t0001g0153 a0002c0004t0001g0007 a0002c0004t0001g0010 others(12): Show |
34 | 428 | 0.0794 | -5 | c.181 others(22): Show |
CHRD | ENSG00000090539.16 | transcript | ENST00000204604.6 | protein_coding | 14/22 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
CHRD_chr3_184375054_184394829 | 184390191 | TCCCTC | T | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00323.hp2 others(70): Show |
a0001a0002a0005others(4): Show | a0001c0001a0001c0003a0001c0008others(9): Show | a0001c0001t0001a0001c0003t0001a0001c0008t0001others(9): Show | a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0006 others(36): Show |
73 | 428 | 0.1706 | -5 | c.*77 others(14): Show |
CHRD | ENSG00000090539.16 | transcript | ENST00000204604.6 | protein_coding | 363 | chr3 | TogoVar | |||||||
CHRFAM7A_chr15_30355566_30398540 | 30356069 | CAAAAA | C | downstream_gene_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG02735.hp1 others(2): Show |
a0002a0003a0009 | a0002c0010a0002c0028a0003c0003others(1): Show | a0002c0010t0008a0002c0028t0008a0003c0003t0022others(1): Show | a0002c0010t0008g0102 a0002c0010t0008g0105 a0002c0028t0008g0106 others(2): Show |
5 | 133 | 0.0376 | -5 | c.*62 others(16): Show |
CHRFAM7A | ENSG00000166664.15 | transcript | ENST00000299847.7 | protein_coding | 4496 | chr15 | TogoVar | |||||||
CHRM2_chr7_136863652_137025213 | 136889047 | CAAAAA | C | intron_variant | MODIFIER | HG01168.hp1 HG01169.hp1 HG01257.hp1 others(7): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0007a0001c0001t0008others(4): Show | a0001c0001t0002g0092 a0001c0001t0007g0287 a0001c0001t0008g0083 others(7): Show |
10 | 320 | 0.0313 | -5 | c.-12 others(26): Show |
CHRM2 | ENSG00000181072.12 | transcript | ENST00000680005.1 | protein_coding | 2/3 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
CHRM2_chr7_136863652_137025213 | 136942867 | TTTCTC | T | intron_variant | MODIFIER | HG01891.hp1 HG02895.hp2 HG02970.hp1 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0013a0001c0001t0014a0001c0001t0023others(1): Show | a0001c0001t0013g0068 a0001c0001t0013g0069 a0001c0001t0013g0070 others(4): Show |
7 | 320 | 0.0219 | -5 | c.-12 others(26): Show |
CHRM2 | ENSG00000181072.12 | transcript | ENST00000680005.1 | protein_coding | 2/3 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
CHRM2_chr7_136863652_137025213 | 136944356 | CGAGTT | C | intron_variant | MODIFIER | HG00323.hp2 HG00438.hp1 HG00558.hp1 others(116): Show |
a0001a0002a0004others(2): Show | a0001c0001a0001c0002a0001c0003others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(53): Show | a0001c0001t0001g0001 a0001c0001t0001g0013 a0001c0001t0001g0023 others(114): Show |
119 | 320 | 0.3719 | -5 | c.-12 others(26): Show |
CHRM2 | ENSG00000181072.12 | transcript | ENST00000680005.1 | protein_coding | 2/3 | chr7 | TogoVar | |||||||
CHRM2_chr7_136863652_137025213 | 136987885 | CTTATT | C | intron_variant | MODIFIER | HG02895.hp2 HG03139.hp2 HG03516.hp2 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0013a0001c0001t0014a0001c0001t0023others(1): Show | a0001c0001t0013g0068 a0001c0001t0013g0069 a0001c0001t0013g0070 others(4): Show |
7 | 320 | 0.0219 | -5 | c.-12 others(24): Show |
CHRM2 | ENSG00000181072.12 | transcript | ENST00000680005.1 | protein_coding | 2/3 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
CHRM2_chr7_136863652_137025213 | 137012054 | GAATAT | G | intron_variant | MODIFIER | HG02615.hp2 HG02723.hp1 HG02809.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0018a0001c0001t0047 | a0001c0001t0018g0041 a0001c0001t0018g0217 a0001c0001t0018g0311 others(1): Show |
4 | 320 | 0.0125 | -5 | c.-46 others(22): Show |
CHRM2 | ENSG00000181072.12 | transcript | ENST00000680005.1 | protein_coding | 3/3 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
CHRM3_chr1_239381568_239920450 | 239404718 | AAATAT | A | intron_variant | MODIFIER | HG02451.hp1 HG02970.hp1 |
a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0041 a0001c0001t0005g0077 |
2 | 116 | 0.0172 | -5 | c.-52 others(26): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
CHRM3_chr1_239381568_239920450 | 239426485 | AGAAAG | A | intron_variant | MODIFIER | HG01106.hp2 HG02109.hp1 HG02615.hp1 others(8): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0012a0001c0001t0013others(8): Show | a0001c0001t0003g0115 a0001c0001t0012g0028 a0001c0001t0013g0085 others(8): Show |
11 | 116 | 0.0948 | -5 | c.-52 others(26): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 1/6 | chr1 | TogoVar | |||||||
CHRM3_chr1_239381568_239920450 | 239488714 | CAAAAA | C | intron_variant | MODIFIER | HG00639.hp1 HG01981.hp2 HG02109.hp1 others(4): Show |
a0001a0003 | a0001c0001a0001c0005a0003c0004 | a0001c0001t0001a0001c0001t0015a0001c0001t0018others(4): Show | a0001c0001t0001g0054 a0001c0001t0015g0033 a0001c0001t0018g0022 others(4): Show |
7 | 116 | 0.0603 | -5 | c.-52 others(24): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
CHRM3_chr1_239381568_239920450 | 239618465 | GTAGTA | G | intron_variant | MODIFIER | HG00140.hp2 HG00609.hp2 HG00639.hp2 others(21): Show |
a0001 | a0001c0001a0001c0005 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(13): Show | a0001c0001t0001g0005 a0001c0001t0001g0010 a0001c0001t0001g0109 others(21): Show |
24 | 116 | 0.2069 | -5 | c.-31 others(26): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
CHRM3_chr1_239381568_239920450 | 239649484 | ATTCAG | A | intron_variant | MODIFIER | HG00438.hp2 HG00639.hp1 HG01109.hp2 others(26): Show |
a0001a0003a0004 | a0001c0001a0003c0004a0004c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(19): Show | a0001c0001t0001g0013 a0001c0001t0001g0052 a0001c0001t0001g0056 others(26): Show |
29 | 116 | 0.2500 | -5 | c.-25 others(26): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 4/6 | chr1 | TogoVar | |||||||
CHRM3_chr1_239381568_239920450 | 239706160 | ATATAT | A | intron_variant | MODIFIER | NA18939.hp1 NA19012.hp1 |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0017 | a0001c0001t0002g0048 a0001c0001t0017g0050 |
2 | 116 | 0.0172 | -5 | c.-14 others(26): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 5/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
CHRM3_chr1_239381568_239920450 | 239847945 | AGGAGG | A | intron_variant | MODIFIER | HG02723.hp2 HG02818.hp1 HG03195.hp1 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0009a0001c0001t0018others(3): Show | a0001c0001t0003g0039 a0001c0001t0009g0111 a0001c0001t0018g0022 others(3): Show |
6 | 116 | 0.0517 | -5 | c.-20 others(24): Show |
CHRM3 | ENSG00000133019.12 | transcript | ENST00000676153.1 | protein_coding | 6/6 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
CHRM5_chr15_33963497_34072458 | 33968099 | TAAAAA | T | upstream_gene_variant | MODIFIER | HG02486.hp2 HG03540.hp2 NA18943.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0021a0001c0001t0023a0001c0001t0028 | a0001c0001t0021g0117 a0001c0001t0021g0118 a0001c0001t0021g0119 others(3): Show |
6 | 338 | 0.0178 | -5 | c.-14 others(16): Show |
CHRM5 | ENSG00000184984.10 | transcript | ENST00000383263.7 | protein_coding | 397 | chr15 | TogoVar | |||||||
CHRM5_chr15_33963497_34072458 | 33975932 | GAAGAA | G | intron_variant | MODIFIER | HG01109.hp1 HG01891.hp1 HG02145.hp1 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004a0001c0001t0026others(2): Show | a0001c0001t0001g0067 a0001c0001t0001g0069 a0001c0001t0001g0071 others(4): Show |
7 | 338 | 0.0207 | -5 | c.-40 others(24): Show |
CHRM5 | ENSG00000184984.10 | transcript | ENST00000383263.7 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
CHRM5_chr15_33963497_34072458 | 33986099 | TTTTTG | T | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(299): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0001c0006others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(37): Show | a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0069 others(295): Show |
302 | 338 | 0.8935 | -5 | c.-40 others(26): Show |
CHRM5 | ENSG00000184984.10 | transcript | ENST00000383263.7 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
CHRM5_chr15_33963497_34072458 | 34008914 | TTAAGA | T | intron_variant | MODIFIER | HG00558.hp2 HG00642.hp1 HG01168.hp1 others(36): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(2): Show | a0001c0001t0001g0141 a0001c0001t0001g0180 a0001c0001t0001g0181 others(36): Show |
39 | 338 | 0.1154 | -5 | c.-40 others(26): Show |
CHRM5 | ENSG00000184984.10 | transcript | ENST00000383263.7 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
CHRM5_chr15_33963497_34072458 | 34014380 | AAAAAC | A | intron_variant | MODIFIER | HG01109.hp1 HG01168.hp2 HG01169.hp2 others(12): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0005a0001c0002t0008 | a0001c0001t0001g0069 a0001c0001t0001g0071 a0001c0001t0001g0173 others(12): Show |
15 | 338 | 0.0444 | -5 | c.-40 others(26): Show |
CHRM5 | ENSG00000184984.10 | transcript | ENST00000383263.7 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
CHRM5_chr15_33963497_34072458 | 34017267 | ACAAAG | A | intron_variant | MODIFIER | HG01168.hp2 HG01169.hp2 HG01257.hp2 others(10): Show |
a0001 | a0001c0002 | a0001c0002t0005a0001c0002t0008 | a0001c0002t0005g0075 a0001c0002t0005g0101 a0001c0002t0005g0102 others(10): Show |
13 | 338 | 0.0385 | -5 | c.-40 others(26): Show |
CHRM5 | ENSG00000184984.10 | transcript | ENST00000383263.7 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
CHRM5_chr15_33963497_34072458 | 34039207 | AGCGGG | A | intron_variant | MODIFIER | HG02886.hp1 HG03209.hp2 HG03225.hp1 others(4): Show |
a0001 | a0001c0001a0001c0009 | a0001c0001t0013a0001c0001t0026a0001c0001t0031others(1): Show | a0001c0001t0013g0032 a0001c0001t0013g0033 a0001c0001t0013g0038 others(4): Show |
7 | 338 | 0.0207 | -5 | c.-40 others(24): Show |
CHRM5 | ENSG00000184984.10 | transcript | ENST00000383263.7 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
CHRNA10_chr11_3660587_3676384 | 3663089 | ATCATC | A | downstream_gene_variant | MODIFIER | HG00738.hp1 HG01258.hp1 HG02109.hp2 others(12): Show |
a0001a0004 | a0001c0001a0004c0005 | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(1): Show | a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0030 others(6): Show |
15 | 450 | 0.0333 | -5 | c.*30 others(16): Show |
CHRNA10 | ENSG00000129749.3 | transcript | ENST00000250699.2 | protein_coding | 2497 | chr11 | TogoVar | |||||||
CHRNA10_chr11_3660587_3676384 | 3673837 | CAAAAA | C | upstream_gene_variant | MODIFIER | HG00140.hp2 HG00280.hp2 HG00735.hp1 others(11): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0002c0002t0006 | a0001c0001t0001g0001 a0002c0002t0006g0019 a0002c0002t0006g0020 |
14 | 450 | 0.0311 | -5 | c.-25 others(16): Show |
CHRNA10 | ENSG00000129749.3 | transcript | ENST00000250699.2 | protein_coding | 2454 | chr11 | TogoVar |