Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CNR2_chr1_23865515_23918362	23890876	TTCTTC TTCTTC	T T	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01891.hp2 HG02886.hp1 others(4): Show HG01884.hp2 HG01891.hp2 HG02886.hp1 HG02895.hp1 HG02897.hp1 HG02976.hp2 HG03486.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0004c0004 a0001c0001 a0004c0004	a0001c0001t0005 a0001c0001t0008 a0001c0001t0044 others(2): Show a0001c0001t0005 a0001c0001t0008 a0001c0001t0044 a0004c0004t0020 a0004c0004t0021	a0001c0001t0005g0001 a0001c0001t0008g0215 a0001c0001t0008g0216 others(4): Show a0001c0001t0005g0001 a0001c0001t0008g0215 a0001c0001t0008g0216 a0001c0001t0008g0218 a0001c0001t0044g0213 a0004c0004t0020g0231 a0004c0004t0021g0232	7	268	0.0261	-5	c.-45 others(24): Show c.-45-15219_-45-15215delGAAGA	CNR2	ENSG00000188822.8	transcript	ENST00000374472.5	protein_coding	1/1			chr1	TogoVar
CNR2_chr1_23865515_23918362	23898335	CTTTTT CTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG01258.hp2 HG01346.hp1 others(39): Show HG00639.hp1 HG01258.hp2 HG01346.hp1 HG01361.hp1 HG01884.hp1 HG01952.hp1 HG01952.hp2 HG01978.hp2 HG02071.hp1 HG02080.hp1 HG02145.hp1 HG02148.hp1 HG02148.hp2 HG02258.hp1 HG02572.hp1 HG02630.hp1 HG02735.hp1 HG02895.hp2 HG02897.hp2 HG03017.hp1 HG03516.hp1 HG03654.hp1 HG03710.hp2 HG06807.hp1 NA18940.hp1 NA18944.hp1 NA18944.hp2 NA18948.hp1 NA18979.hp1 NA18982.hp2 NA19000.hp1 NA19000.hp2 NA19001.hp1 NA19001.hp2 NA19007.hp1 NA19011.hp1 NA19011.hp2 NA19077.hp1 NA19077.hp2 NA19083.hp1 NA20129.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0006	a0001c0001 a0002c0002 a0003c0003 others(1): Show a0001c0001 a0002c0002 a0003c0003 a0006c0006	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(14): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 a0001c0001t0008 a0001c0001t0016 a0001c0001t0017 a0001c0001t0035 a0002c0002t0002 a0002c0002t0022 a0002c0002t0059 a0002c0002t0061 a0002c0002t0063 a0003c0003t0004 a0003c0003t0009 a0003c0003t0056 a0006c0006t0055	a0001c0001t0001g0004 a0001c0001t0001g0021 a0001c0001t0001g0058 others(39): Show a0001c0001t0001g0004 a0001c0001t0001g0021 a0001c0001t0001g0058 a0001c0001t0001g0078 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0104 a0001c0001t0001g0124 a0001c0001t0001g0137 a0001c0001t0001g0142 a0001c0001t0001g0170 a0001c0001t0001g0242 a0001c0001t0003g0053 a0001c0001t0003g0062 a0001c0001t0003g0094 a0001c0001t0003g0140 a0001c0001t0003g0238 a0001c0001t0005g0060 a0001c0001t0005g0184 a0001c0001t0005g0251 a0001c0001t0006g0210 a0001c0001t0008g0005 a0001c0001t0016g0150 a0001c0001t0017g0178 a0001c0001t0035g0046 a0002c0002t0002g0006 a0002c0002t0002g0159 a0002c0002t0002g0165 a0002c0002t0002g0201 a0002c0002t0022g0264 a0002c0002t0059g0101 a0002c0002t0061g0059 a0002c0002t0063g0258 a0003c0003t0004g0008 a0003c0003t0004g0009 a0003c0003t0004g0050 a0003c0003t0004g0163 a0003c0003t0004g0198 a0003c0003t0004g0203 a0003c0003t0009g0202 a0003c0003t0056g0189 a0006c0006t0055g0191	42	268	0.1567	-5	c.-46 others(24): Show c.-46+14906_-46+14910delAAAAA	CNR2	ENSG00000188822.8	transcript	ENST00000374472.5	protein_coding	1/1			chr1	TogoVar
CNR2_chr1_23865515_23918362	23913490	GGTTGA GGTTGA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01243.hp1 HG02109.hp1 HG02258.hp1 others(3): Show HG01243.hp1 HG02109.hp1 HG02258.hp1 HG02922.hp2 HG03139.hp1 HG03471.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0068 a0001c0001t0005 a0001c0001t0068	a0001c0001t0005g0247 a0001c0001t0005g0251 a0001c0001t0005g0252 others(3): Show a0001c0001t0005g0247 a0001c0001t0005g0251 a0001c0001t0005g0252 a0001c0001t0005g0253 a0001c0001t0005g0254 a0001c0001t0068g0245	6	268	0.0224	-5	c.-29 others(14): Show c.-295_-291delTCAAC	CNR2	ENSG00000188822.8	transcript	ENST00000374472.5	protein_coding		129		chr1	TogoVar
CNRIP1_chr2_68288010_68324949	68305244	CAAAAA CAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG00673.hp1 HG02055.hp1 others(7): Show HG00438.hp2 HG00673.hp1 HG02055.hp1 HG02559.hp1 HG02622.hp1 HG02622.hp2 NA18952.hp1 NA18959.hp1 NA18984.hp1 NA19074.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0003t0001 a0001c0001t0001 a0001c0003t0001	a0001c0001t0001g0006 a0001c0001t0001g0035 a0001c0001t0001g0063 others(5): Show a0001c0001t0001g0006 a0001c0001t0001g0035 a0001c0001t0001g0063 a0001c0001t0001g0211 a0001c0001t0001g0216 a0001c0001t0001g0234 a0001c0001t0001g0235 a0001c0003t0001g0253	10	424	0.0236	-5	c.331 others(24): Show c.331-11223_331-11219delTTTTT	CNRIP1	ENSG00000119865.9	transcript	ENST00000263655.4	protein_coding	2/2			chr2	TogoVar
CNRIP1_chr2_68288010_68324949	68305256	AAAAAT AAAAAT	A A	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00738.hp2 HG01069.hp2 others(44): Show HG00323.hp2 HG00738.hp2 HG01069.hp2 HG01074.hp1 HG01192.hp2 HG01256.hp1 HG01258.hp2 HG01346.hp2 HG01433.hp2 HG01515.hp1 HG01515.hp2 HG01517.hp2 HG01928.hp2 HG01952.hp1 HG01975.hp2 HG02015.hp2 HG02083.hp2 HG02165.hp2 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02523.hp2 HG02630.hp2 HG02735.hp2 HG02738.hp2 HG02809.hp1 HG02809.hp2 HG02965.hp2 HG03453.hp1 HG03834.hp1 HG03927.hp1 HG03942.hp1 HG04115.hp1 HG04199.hp2 HG06807.hp1 NA18747.hp1 NA18965.hp2 NA18972.hp1 NA18986.hp2 NA19006.hp1 NA19043.hp1 NA19064.hp1 NA19081.hp1 NA19088.hp2 NA19240.hp2 NA20300.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0002c0005	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0002t0008 a0001c0003t0001 a0002c0005t0001	a0001c0001t0001g0040 a0001c0001t0001g0117 a0001c0001t0001g0122 others(42): Show a0001c0001t0001g0040 a0001c0001t0001g0117 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0127 a0001c0001t0001g0136 a0001c0001t0001g0138 a0001c0001t0001g0145 a0001c0001t0001g0151 a0001c0001t0001g0197 a0001c0001t0001g0198 a0001c0001t0001g0199 a0001c0001t0001g0200 a0001c0001t0001g0203 a0001c0001t0001g0204 a0001c0001t0001g0231 a0001c0001t0002g0370 a0001c0002t0001g0008 a0001c0002t0001g0306 a0001c0002t0001g0339 a0001c0002t0001g0340 a0001c0002t0001g0342 a0001c0002t0001g0343 a0001c0002t0001g0344 a0001c0002t0001g0345 a0001c0002t0001g0347 a0001c0002t0001g0348 a0001c0002t0001g0350 a0001c0002t0001g0352 a0001c0002t0001g0356 a0001c0002t0001g0358 a0001c0002t0001g0359 a0001c0002t0001g0360 a0001c0002t0008g0380 a0001c0003t0001g0257 a0001c0003t0001g0270 a0001c0003t0001g0275 a0001c0003t0001g0276 a0001c0003t0001g0278 a0001c0003t0001g0280 a0001c0003t0001g0281 a0001c0003t0001g0284 a0002c0005t0001g0304 a0002c0005t0001g0305	47	424	0.1109	-5	c.331 others(24): Show c.331-11235_331-11231delATTTT	CNRIP1	ENSG00000119865.9	transcript	ENST00000263655.4	protein_coding	2/2			chr2	TogoVar
CNST_chr1_246561456_246673595	246585641	CAAAAA CAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01433.hp1 HG01884.hp2 HG02257.hp2 others(6): Show HG01433.hp1 HG01884.hp2 HG02257.hp2 HG02486.hp2 HG02622.hp1 HG03098.hp2 HG03139.hp2 HG03486.hp1 NA19240.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0008	a0001c0001 a0001c0006 a0002c0002 others(2): Show a0001c0001 a0001c0006 a0002c0002 a0003c0003 a0008c0011	a0001c0001t0004 a0001c0001t0005 a0001c0006t0001 others(3): Show a0001c0001t0004 a0001c0001t0005 a0001c0006t0001 a0002c0002t0015 a0003c0003t0001 a0008c0011t0015	a0001c0001t0004g0174 a0001c0001t0005g0155 a0001c0001t0005g0203 others(6): Show a0001c0001t0004g0174 a0001c0001t0005g0155 a0001c0001t0005g0203 a0001c0001t0005g0204 a0001c0001t0005g0205 a0001c0006t0001g0009 a0002c0002t0015g0168 a0003c0003t0001g0040 a0008c0011t0015g0213	9	320	0.0281	-5	c.-51 others(22): Show c.-51-5853_-51-5849delAAAAA	CNST	ENSG00000162852.14	transcript	ENST00000366513.9	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr1	TogoVar
CNST_chr1_246561456_246673595	246585663	ATATAC ATATAC	A A	intron_variant intron_variant	MODIFIER	HG01257.hp2 HG01346.hp1 HG02071.hp1 others(5): Show HG01257.hp2 HG01346.hp1 HG02071.hp1 HG03041.hp1 HG04184.hp1 NA18943.hp1 NA18993.hp2 NA19009.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0014	a0001c0001t0001g0061 a0001c0001t0001g0098 a0001c0001t0001g0182 others(5): Show a0001c0001t0001g0061 a0001c0001t0001g0098 a0001c0001t0001g0182 a0001c0001t0001g0197 a0001c0001t0002g0313 a0001c0001t0003g0073 a0001c0001t0003g0082 a0001c0001t0014g0164	8	320	0.0250	-5	c.-51 others(22): Show c.-51-5848_-51-5844delTATAC	CNST	ENSG00000162852.14	transcript	ENST00000366513.9	protein_coding	1/10			chr1	TogoVar
CNTD1_chr17_42793861_42816587	42801511	ATATAT ATATAT	A A	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG03225.hp2 HG03579.hp1 others(3): Show HG02258.hp1 HG03225.hp2 HG03579.hp1 HG04115.hp1 NA19089.hp2 NA19090.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0010 a0001c0001t0001 a0001c0001t0002 a0001c0001t0010	a0001c0001t0001g0067 a0001c0001t0001g0130 a0001c0001t0002g0087 others(3): Show a0001c0001t0001g0067 a0001c0001t0001g0130 a0001c0001t0002g0087 a0001c0001t0002g0088 a0001c0001t0002g0150 a0001c0001t0010g0232	6	306	0.0196	-5	c.170 others(22): Show c.170-2108_170-2104delTATAT	CNTD1	ENSG00000176563.10	transcript	ENST00000588408.6	protein_coding	1/6			chr17	TogoVar
CNTFR_chr9_34546433_34594724	34577836	GAGAAA GAGAAA	G G	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00558.hp1 HG00558.hp2 others(98): Show HG00408.hp1 HG00558.hp1 HG00558.hp2 HG00609.hp2 HG00621.hp2 HG00642.hp2 HG00673.hp1 HG00735.hp2 HG01074.hp1 HG01109.hp2 HG01168.hp1 HG01169.hp1 HG01192.hp1 HG01192.hp2 HG01257.hp1 HG01258.hp1 HG01433.hp1 HG01496.hp2 HG01928.hp2 HG01934.hp1 HG01943.hp1 HG01952.hp2 HG01981.hp2 HG02004.hp2 HG02040.hp1 HG02040.hp2 HG02056.hp2 HG02071.hp1 HG02074.hp1 HG02074.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp2 HG02258.hp1 HG02280.hp1 HG02280.hp2 HG02451.hp2 HG02559.hp1 HG02559.hp2 HG02602.hp1 HG02622.hp2 HG02630.hp2 HG02683.hp2 HG02738.hp1 HG02895.hp2 HG02897.hp2 HG02970.hp2 HG03017.hp2 HG03041.hp1 HG03195.hp1 HG03471.hp2 HG03516.hp2 HG03540.hp2 HG03688.hp1 HG03927.hp1 HG03942.hp1 HG04115.hp2 HG04184.hp2 HG04199.hp2 NA18906.hp1 NA18906.hp2 NA18940.hp1 NA18941.hp1 NA18945.hp1 NA18946.hp2 NA18950.hp2 NA18952.hp2 NA18956.hp2 NA18959.hp1 NA18964.hp1 NA18965.hp2 NA18968.hp1 NA18970.hp2 NA18974.hp2 NA18983.hp2 NA18985.hp2 NA18988.hp1 NA18993.hp2 NA18995.hp1 NA19002.hp1 NA19004.hp1 NA19007.hp1 NA19009.hp2 NA19030.hp1 NA19055.hp1 NA19064.hp1 NA19066.hp1 NA19072.hp1 NA19085.hp1 NA19086.hp1 NA19086.hp2 NA19087.hp1 NA19088.hp1 NA19089.hp1 NA19240.hp1	a0001 a0005 a0006 a0001 a0005 a0006	a0001c0001 a0001c0002 a0001c0004 others(4): Show a0001c0001 a0001c0002 a0001c0004 a0001c0011 a0001c0012 a0005c0006 a0006c0009	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0007 a0001c0001t0008 a0001c0002t0002 a0001c0004t0001 a0001c0011t0002 a0001c0012t0001 a0005c0006t0002 a0006c0009t0002	a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0021 others(68): Show a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0021 a0001c0001t0001g0032 a0001c0001t0001g0034 a0001c0001t0001g0064 a0001c0001t0001g0080 a0001c0001t0001g0113 a0001c0001t0001g0119 a0001c0001t0001g0121 a0001c0001t0001g0132 a0001c0001t0001g0137 a0001c0001t0001g0139 a0001c0001t0001g0168 a0001c0001t0001g0173 a0001c0001t0001g0174 a0001c0001t0001g0175 a0001c0001t0001g0203 a0001c0001t0001g0205 a0001c0001t0001g0210 a0001c0001t0001g0219 a0001c0001t0001g0261 a0001c0001t0001g0262 a0001c0001t0001g0263 a0001c0001t0001g0268 a0001c0001t0002g0010 a0001c0001t0002g0017 a0001c0001t0002g0020 a0001c0001t0002g0024 a0001c0001t0002g0033 a0001c0001t0002g0047 a0001c0001t0002g0115 a0001c0001t0002g0116 a0001c0001t0002g0117 a0001c0001t0002g0122 a0001c0001t0002g0124 a0001c0001t0002g0125 a0001c0001t0002g0126 a0001c0001t0002g0127 a0001c0001t0002g0133 a0001c0001t0002g0134 a0001c0001t0002g0135 a0001c0001t0002g0136 a0001c0001t0002g0140 a0001c0001t0002g0141 a0001c0001t0002g0142 a0001c0001t0002g0143 a0001c0001t0002g0147 a0001c0001t0002g0148 a0001c0001t0002g0149 a0001c0001t0002g0156 a0001c0001t0002g0172 a0001c0001t0002g0204 a0001c0001t0002g0222 a0001c0001t0002g0236 a0001c0001t0002g0264 a0001c0001t0003g0048 a0001c0001t0003g0049 a0001c0001t0003g0242 a0001c0001t0003g0251 a0001c0001t0007g0088 a0001c0001t0008g0114 a0001c0002t0002g0004 a0001c0002t0002g0120 a0001c0002t0002g0131 a0001c0002t0002g0157 a0001c0004t0001g0093 a0001c0011t0002g0265 a0001c0012t0001g0061 a0005c0006t0002g0123 a0006c0009t0002g0138	101	402	0.2512	-5	c.-1+ others(20): Show c.-1+3254_-1+3258delTTTCT	CNTFR	ENSG00000122756.15	transcript	ENST00000378980.8	protein_coding	2/9			chr9	TogoVar
CNTFR_chr9_34546433_34594724	34582276	CAAAAA CAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00323.hp2 HG00408.hp1 others(161): Show HG00099.hp2 HG00323.hp2 HG00408.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp2 HG00639.hp1 HG00642.hp1 HG00642.hp2 HG00733.hp1 HG00735.hp2 HG00741.hp1 HG01070.hp2 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01106.hp1 HG01106.hp2 HG01109.hp2 HG01123.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01192.hp2 HG01243.hp1 HG01255.hp2 HG01256.hp2 HG01257.hp2 HG01346.hp2 HG01496.hp2 HG01517.hp2 HG01884.hp1 HG01891.hp2 HG01928.hp2 HG01934.hp1 HG01943.hp1 HG01952.hp2 HG01978.hp2 HG01981.hp2 HG01993.hp1 HG02004.hp2 HG02040.hp2 HG02071.hp1 HG02074.hp1 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02280.hp2 HG02293.hp2 HG02300.hp2 HG02451.hp2 HG02486.hp1 HG02559.hp1 HG02572.hp2 HG02602.hp1 HG02622.hp2 HG02630.hp2 HG02647.hp2 HG02683.hp2 HG02698.hp2 HG02717.hp2 HG02735.hp1 HG02738.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp2 HG03017.hp2 HG03041.hp1 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03225.hp1 HG03239.hp1 HG03239.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03654.hp1 HG03688.hp1 HG03834.hp2 HG03942.hp2 HG04115.hp1 HG04184.hp1 HG06807.hp1 HG06807.hp2 NA18522.hp2 NA18747.hp1 NA18906.hp2 NA18940.hp1 NA18941.hp1 NA18944.hp1 NA18945.hp1 NA18946.hp2 NA18950.hp1 NA18950.hp2 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18964.hp1 NA18965.hp2 NA18968.hp1 NA18970.hp2 NA18974.hp2 NA18975.hp2 NA18982.hp2 NA18983.hp2 NA18985.hp1 NA18985.hp2 NA18988.hp1 NA18990.hp1 NA18993.hp2 NA18995.hp1 NA18998.hp2 NA19000.hp1 NA19002.hp1 NA19004.hp1 NA19007.hp1 NA19009.hp2 NA19030.hp2 NA19060.hp1 NA19060.hp2 NA19064.hp2 NA19066.hp1 NA19068.hp2 NA19070.hp2 NA19072.hp1 NA19077.hp1 NA19081.hp2 NA19085.hp1 NA19086.hp1 NA19087.hp1 NA19088.hp1 NA19089.hp1 NA19090.hp2 NA19240.hp1 NA20129.hp2 NA20300.hp1 NA20752.hp1 NA20805.hp1 NA20905.hp2 NA21309.hp1 homoSapiens_chm13v2.hp1	a0001 a0003 a0005 others(1): Show a0001 a0003 a0005 a0006	a0001c0001 a0001c0002 a0001c0003 others(5): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0011 a0003c0007 a0005c0006 a0006c0009	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(9): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 a0001c0001t0007 a0001c0002t0002 a0001c0003t0001 a0001c0004t0001 a0001c0011t0002 a0003c0007t0001 a0005c0006t0002 a0006c0009t0002	a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0006 others(106): Show a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0029 a0001c0001t0001g0032 a0001c0001t0001g0034 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0046 a0001c0001t0001g0053 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0063 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0086 a0001c0001t0001g0089 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0119 a0001c0001t0001g0121 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0132 a0001c0001t0001g0137 a0001c0001t0001g0139 a0001c0001t0001g0153 a0001c0001t0001g0155 a0001c0001t0001g0159 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0205 a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0209 a0001c0001t0001g0210 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0213 a0001c0001t0001g0214 a0001c0001t0001g0215 a0001c0001t0001g0217 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0221 a0001c0001t0001g0261 a0001c0001t0001g0262 a0001c0001t0001g0263 a0001c0001t0001g0266 a0001c0001t0002g0010 a0001c0001t0002g0017 a0001c0001t0002g0018 a0001c0001t0002g0019 a0001c0001t0002g0020 a0001c0001t0002g0024 a0001c0001t0002g0030 a0001c0001t0002g0033 a0001c0001t0002g0047 a0001c0001t0002g0090 a0001c0001t0002g0115 a0001c0001t0002g0116 a0001c0001t0002g0118 a0001c0001t0002g0122 a0001c0001t0002g0124 a0001c0001t0002g0125 a0001c0001t0002g0126 a0001c0001t0002g0127 a0001c0001t0002g0130 a0001c0001t0002g0133 a0001c0001t0002g0134 a0001c0001t0002g0135 a0001c0001t0002g0136 a0001c0001t0002g0140 a0001c0001t0002g0141 a0001c0001t0002g0142 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0156 a0001c0001t0002g0158 a0001c0001t0002g0204 a0001c0001t0002g0206 a0001c0001t0002g0222 a0001c0001t0002g0264 a0001c0001t0003g0074 a0001c0001t0003g0216 a0001c0001t0006g0045 a0001c0001t0007g0088 a0001c0002t0002g0004 a0001c0002t0002g0031 a0001c0002t0002g0120 a0001c0002t0002g0131 a0001c0002t0002g0157 a0001c0003t0001g0036 a0001c0004t0001g0093 a0001c0011t0002g0265 a0003c0007t0001g0223 a0005c0006t0002g0123 a0006c0009t0002g0138	164	402	0.4080	-5	c.-11 others(24): Show c.-111-1076_-111-1072delTTTTT	CNTFR	ENSG00000122756.15	transcript	ENST00000378980.8	protein_coding	1/9			chr9	TogoVar
CNTLN_chr9_17130040_17508923	17134399	GCAAAA GCAAAA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02965.hp2 HG03579.hp2 HG02965.hp2 HG03579.hp2	a0002 a0002	a0002c0013 a0002c0013	a0002c0013t0002 a0002c0013t0002	a0002c0013t0002g0209 a0002c0013t0002g0210 a0002c0013t0002g0209 a0002c0013t0002g0210	2	218	0.0092	-5	c.-66 others(14): Show c.-666_-662delCAAAA	CNTLN	ENSG00000044459.15	transcript	ENST00000380647.8	protein_coding		640		chr9	TogoVar
CNTLN_chr9_17130040_17508923	17140437	GGTTAT GGTTAT	G G	intron_variant intron_variant	MODIFIER	HG01928.hp1 HG01928.hp2 HG01934.hp2 others(2): Show HG01928.hp1 HG01928.hp2 HG01934.hp2 HG01975.hp1 HG01978.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0002 a0001c0001 a0003c0002	a0001c0001t0001 a0003c0002t0001 a0001c0001t0001 a0003c0002t0001	a0001c0001t0001g0200 a0001c0001t0001g0201 a0001c0001t0001g0202 others(2): Show a0001c0001t0001g0200 a0001c0001t0001g0201 a0001c0001t0001g0202 a0001c0001t0001g0203 a0003c0002t0001g0199	5	218	0.0229	-5	c.361 others(22): Show c.361-2847_361-2843delATGTT	CNTLN	ENSG00000044459.15	transcript	ENST00000380647.8	protein_coding	1/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
CNTLN_chr9_17130040_17508923	17158345	GTTTTC GTTTTC	G G	intron_variant intron_variant	MODIFIER	HG00544.hp1 HG00609.hp2 HG02735.hp2 others(8): Show HG00544.hp1 HG00609.hp2 HG02735.hp2 NA18612.hp1 NA18943.hp2 NA18947.hp2 NA18954.hp1 NA18989.hp2 NA19004.hp1 NA19060.hp2 NA19086.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0001 a0001c0004t0001	a0001c0004t0001g0005 a0001c0004t0001g0006 a0001c0004t0001g0007 others(8): Show a0001c0004t0001g0005 a0001c0004t0001g0006 a0001c0004t0001g0007 a0001c0004t0001g0008 a0001c0004t0001g0009 a0001c0004t0001g0010 a0001c0004t0001g0011 a0001c0004t0001g0012 a0001c0004t0001g0013 a0001c0004t0001g0014 a0001c0004t0001g0015	11	218	0.0505	-5	c.449 others(24): Show c.449+14977_449+14981delTTCTT	CNTLN	ENSG00000044459.15	transcript	ENST00000380647.8	protein_coding	2/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
CNTLN_chr9_17130040_17508923	17173420	CTTATT CTTATT	C C	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG02572.hp1 NA19240.hp1 HG00735.hp1 HG02572.hp1 NA19240.hp1	a0001 a0001	a0001c0027 a0001c0028 a0001c0029 a0001c0027 a0001c0028 a0001c0029	a0001c0027t0001 a0001c0028t0004 a0001c0029t0004 a0001c0027t0001 a0001c0028t0004 a0001c0029t0004	a0001c0027t0001g0143 a0001c0028t0004g0155 a0001c0029t0004g0028 a0001c0027t0001g0143 a0001c0028t0004g0155 a0001c0029t0004g0028	3	218	0.0138	-5	c.449 others(24): Show c.449+30048_449+30052delTTTTA	CNTLN	ENSG00000044459.15	transcript	ENST00000380647.8	protein_coding	2/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
CNTLN_chr9_17130040_17508923	17180346	TTATTA TTATTA	T T	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00408.hp1 HG00423.hp1 others(50): Show HG00140.hp1 HG00408.hp1 HG00423.hp1 HG00738.hp2 HG01069.hp2 HG01070.hp1 HG01071.hp1 HG01074.hp2 HG01109.hp2 HG01884.hp2 HG01934.hp1 HG01975.hp2 HG02132.hp1 HG02148.hp2 HG02257.hp2 HG02293.hp2 HG02486.hp1 HG02559.hp2 HG02572.hp2 HG02602.hp2 HG02622.hp2 HG02723.hp1 HG02809.hp1 HG02896.hp1 HG02897.hp2 HG02965.hp2 HG03041.hp2 HG03139.hp1 HG03239.hp1 HG03492.hp1 HG03492.hp2 HG03579.hp2 HG03704.hp1 HG03834.hp2 HG04204.hp2 NA18906.hp1 NA18949.hp2 NA18951.hp1 NA18974.hp1 NA18978.hp2 NA18984.hp1 NA19003.hp2 NA19011.hp1 NA19043.hp2 NA19057.hp1 NA19065.hp2 NA19066.hp1 NA19068.hp1 NA19079.hp2 NA19084.hp2 NA19087.hp2 NA20129.hp1 NA20300.hp2	a0001 a0002 a0005 others(5): Show a0001 a0002 a0005 a0007 a0012 a0014 a0015 a0021	a0001c0001 a0001c0014 a0002c0006 others(15): Show a0001c0001 a0001c0014 a0002c0006 a0002c0008 a0002c0013 a0002c0017 a0005c0005 a0005c0037 a0005c0038 a0007c0011 a0007c0022 a0007c0052 a0007c0053 a0012c0018 a0014c0021 a0015c0035 a0015c0036 a0021c0051	a0001c0001t0001 a0001c0014t0001 a0002c0006t0001 others(24): Show a0001c0001t0001 a0001c0014t0001 a0002c0006t0001 a0002c0006t0002 a0002c0006t0003 a0002c0008t0001 a0002c0013t0001 a0002c0013t0002 a0002c0017t0001 a0005c0005t0001 a0005c0005t0002 a0005c0005t0010 a0005c0037t0001 a0005c0038t0001 a0007c0011t0002 a0007c0011t0003 a0007c0011t0004 a0007c0011t0011 a0007c0022t0005 a0007c0052t0004 a0007c0053t0007 a0012c0018t0001 a0014c0021t0002 a0014c0021t0008 a0015c0035t0001 a0015c0036t0001 a0021c0051t0007	a0001c0001t0001g0124 a0001c0014t0001g0038 a0002c0006t0001g0029 others(50): Show a0001c0001t0001g0124 a0001c0014t0001g0038 a0002c0006t0001g0029 a0002c0006t0001g0030 a0002c0006t0001g0031 a0002c0006t0001g0033 a0002c0006t0001g0041 a0002c0006t0001g0044 a0002c0006t0001g0076 a0002c0006t0002g0032 a0002c0006t0002g0105 a0002c0006t0002g0144 a0002c0006t0003g0036 a0002c0008t0001g0026 a0002c0008t0001g0027 a0002c0008t0001g0035 a0002c0008t0001g0037 a0002c0013t0001g0045 a0002c0013t0002g0209 a0002c0013t0002g0210 a0002c0017t0001g0196 a0005c0005t0001g0075 a0005c0005t0001g0089 a0005c0005t0001g0090 a0005c0005t0001g0091 a0005c0005t0001g0092 a0005c0005t0001g0093 a0005c0005t0001g0094 a0005c0005t0001g0095 a0005c0005t0001g0096 a0005c0005t0001g0097 a0005c0005t0001g0101 a0005c0005t0002g0103 a0005c0005t0010g0098 a0005c0005t0010g0099 a0005c0037t0001g0100 a0005c0038t0001g0102 a0007c0011t0002g0109 a0007c0011t0003g0114 a0007c0011t0004g0110 a0007c0011t0004g0113 a0007c0011t0011g0112 a0007c0022t0005g0107 a0007c0022t0005g0117 a0007c0052t0004g0116 a0007c0053t0007g0118 a0012c0018t0001g0042 a0012c0018t0001g0043 a0014c0021t0002g0111 a0014c0021t0008g0115 a0015c0035t0001g0088 a0015c0036t0001g0104 a0021c0051t0007g0108	53	218	0.2431	-5	c.449 others(24): Show c.449+36999_449+37003delTATAT	CNTLN	ENSG00000044459.15	transcript	ENST00000380647.8	protein_coding	2/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
CNTLN_chr9_17130040_17508923	17232993	CAGAAA CAGAAA	C C	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00408.hp1 HG00423.hp1 others(62): Show HG00140.hp1 HG00408.hp1 HG00423.hp1 HG00738.hp2 HG01069.hp2 HG01070.hp1 HG01071.hp1 HG01074.hp1 HG01074.hp2 HG01109.hp2 HG01168.hp1 HG01192.hp1 HG01884.hp2 HG01934.hp1 HG01975.hp2 HG01978.hp2 HG02132.hp1 HG02148.hp2 HG02257.hp1 HG02257.hp2 HG02293.hp2 HG02486.hp1 HG02559.hp2 HG02572.hp2 HG02602.hp2 HG02622.hp2 HG02647.hp1 HG02723.hp1 HG02809.hp1 HG02886.hp2 HG02896.hp1 HG02897.hp2 HG02922.hp1 HG02965.hp2 HG03041.hp2 HG03139.hp1 HG03225.hp2 HG03239.hp1 HG03453.hp2 HG03471.hp2 HG03492.hp1 HG03492.hp2 HG03579.hp1 HG03579.hp2 HG03704.hp1 HG03834.hp2 HG04204.hp2 HG06807.hp1 NA18906.hp1 NA18949.hp2 NA18951.hp1 NA18974.hp1 NA18978.hp2 NA18984.hp1 NA19003.hp2 NA19043.hp2 NA19057.hp1 NA19065.hp2 NA19066.hp1 NA19068.hp1 NA19079.hp2 NA19084.hp2 NA19087.hp2 NA20129.hp1 NA20300.hp2	a0001 a0002 a0005 others(10): Show a0001 a0002 a0005 a0007 a0008 a0010 a0012 a0014 a0015 a0019 a0021 a0024 a0026	a0001c0001 a0001c0014 a0001c0031 others(22): Show a0001c0001 a0001c0014 a0001c0031 a0002c0006 a0002c0008 a0002c0013 a0002c0017 a0002c0048 a0005c0005 a0005c0037 a0005c0038 a0007c0011 a0007c0022 a0007c0052 a0007c0053 a0008c0010 a0010c0012 a0012c0018 a0014c0021 a0015c0035 a0015c0036 a0019c0047 a0021c0051 a0024c0054 a0026c0025	a0001c0001t0001 a0001c0014t0001 a0001c0031t0002 others(33): Show a0001c0001t0001 a0001c0014t0001 a0001c0031t0002 a0002c0006t0001 a0002c0006t0002 a0002c0006t0003 a0002c0008t0001 a0002c0008t0009 a0002c0013t0001 a0002c0013t0002 a0002c0017t0001 a0002c0048t0007 a0005c0005t0001 a0005c0005t0002 a0005c0005t0010 a0005c0037t0001 a0005c0038t0001 a0007c0011t0002 a0007c0011t0003 a0007c0011t0004 a0007c0011t0011 a0007c0022t0005 a0007c0052t0004 a0007c0053t0007 a0008c0010t0002 a0010c0012t0002 a0010c0012t0003 a0012c0018t0001 a0014c0021t0002 a0014c0021t0008 a0015c0035t0001 a0015c0036t0001 a0019c0047t0002 a0021c0051t0007 a0024c0054t0013 a0026c0025t0003	a0001c0001t0001g0124 a0001c0014t0001g0038 a0001c0031t0002g0048 others(62): Show a0001c0001t0001g0124 a0001c0014t0001g0038 a0001c0031t0002g0048 a0002c0006t0001g0029 a0002c0006t0001g0030 a0002c0006t0001g0031 a0002c0006t0001g0033 a0002c0006t0001g0041 a0002c0006t0001g0044 a0002c0006t0001g0076 a0002c0006t0002g0105 a0002c0006t0002g0144 a0002c0006t0003g0036 a0002c0008t0001g0026 a0002c0008t0001g0027 a0002c0008t0001g0035 a0002c0008t0001g0037 a0002c0008t0001g0039 a0002c0008t0001g0040 a0002c0008t0009g0034 a0002c0013t0001g0045 a0002c0013t0002g0209 a0002c0013t0002g0210 a0002c0017t0001g0196 a0002c0048t0007g0216 a0005c0005t0001g0075 a0005c0005t0001g0089 a0005c0005t0001g0090 a0005c0005t0001g0091 a0005c0005t0001g0092 a0005c0005t0001g0093 a0005c0005t0001g0094 a0005c0005t0001g0095 a0005c0005t0001g0096 a0005c0005t0001g0097 a0005c0005t0001g0101 a0005c0005t0002g0103 a0005c0005t0010g0098 a0005c0005t0010g0099 a0005c0037t0001g0100 a0005c0038t0001g0102 a0007c0011t0002g0109 a0007c0011t0003g0114 a0007c0011t0004g0110 a0007c0011t0004g0113 a0007c0011t0011g0112 a0007c0022t0005g0107 a0007c0022t0005g0117 a0007c0052t0004g0116 a0007c0053t0007g0118 a0008c0010t0002g0049 a0010c0012t0002g0018 a0010c0012t0002g0019 a0010c0012t0002g0020 a0010c0012t0003g0025 a0012c0018t0001g0042 a0012c0018t0001g0043 a0014c0021t0002g0111 a0014c0021t0008g0115 a0015c0035t0001g0088 a0015c0036t0001g0104 a0019c0047t0002g0046 a0021c0051t0007g0108 a0024c0054t0013g0047 a0026c0025t0003g0024	65	218	0.2982	-5	c.535 others(22): Show c.535-2662_535-2658delAAAAG	CNTLN	ENSG00000044459.15	transcript	ENST00000380647.8	protein_coding	3/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
CNTLN_chr9_17130040_17508923	17244213	TTTTTG TTTTTG	T T	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG02109.hp1 HG02258.hp1 others(3): Show HG01109.hp1 HG02109.hp1 HG02258.hp1 HG02895.hp1 HG02896.hp2 HG02897.hp1	a0001 a0011 a0013 a0001 a0011 a0013	a0001c0058 a0011c0015 a0013c0019 a0001c0058 a0011c0015 a0013c0019	a0001c0058t0001 a0011c0015t0002 a0013c0019t0002 a0001c0058t0001 a0011c0015t0002 a0013c0019t0002	a0001c0058t0001g0021 a0011c0015t0002g0213 a0011c0015t0002g0214 others(3): Show a0001c0058t0001g0021 a0011c0015t0002g0213 a0011c0015t0002g0214 a0011c0015t0002g0215 a0013c0019t0002g0119 a0013c0019t0002g0120	6	218	0.0275	-5	c.849 others(22): Show c.849+7630_849+7634delGTTTT	CNTLN	ENSG00000044459.15	transcript	ENST00000380647.8	protein_coding	5/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
CNTLN_chr9_17130040_17508923	17249349	TTTTTG TTTTTG	T T	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00423.hp1 HG00738.hp2 others(45): Show HG00140.hp1 HG00423.hp1 HG00738.hp2 HG01069.hp2 HG01070.hp1 HG01071.hp1 HG01074.hp2 HG01109.hp2 HG01168.hp1 HG01433.hp1 HG01884.hp2 HG01978.hp2 HG02257.hp2 HG02486.hp1 HG02559.hp2 HG02572.hp2 HG02602.hp2 HG02622.hp2 HG02723.hp1 HG02809.hp1 HG02896.hp1 HG02897.hp2 HG02965.hp2 HG03041.hp2 HG03098.hp1 HG03139.hp1 HG03239.hp1 HG03492.hp1 HG03492.hp2 HG03579.hp1 HG03579.hp2 HG03704.hp1 HG03834.hp2 HG04204.hp2 HG06807.hp1 NA18906.hp1 NA18951.hp1 NA18974.hp1 NA18978.hp2 NA18984.hp1 NA19003.hp2 NA19043.hp2 NA19057.hp1 NA19065.hp2 NA19068.hp1 NA19079.hp2 NA19087.hp2 NA20129.hp1	a0001 a0002 a0005 others(6): Show a0001 a0002 a0005 a0007 a0012 a0014 a0015 a0021 a0026	a0001c0001 a0001c0014 a0002c0006 others(16): Show a0001c0001 a0001c0014 a0002c0006 a0002c0008 a0002c0013 a0002c0017 a0005c0005 a0005c0037 a0005c0038 a0007c0011 a0007c0022 a0007c0052 a0007c0053 a0012c0018 a0014c0021 a0015c0035 a0015c0036 a0021c0051 a0026c0025	a0001c0001t0001 a0001c0001t0002 a0001c0014t0001 others(24): Show a0001c0001t0001 a0001c0001t0002 a0001c0014t0001 a0002c0006t0002 a0002c0008t0001 a0002c0008t0009 a0002c0013t0002 a0002c0017t0001 a0005c0005t0001 a0005c0005t0002 a0005c0005t0010 a0005c0037t0001 a0005c0038t0001 a0007c0011t0002 a0007c0011t0003 a0007c0011t0004 a0007c0011t0011 a0007c0022t0005 a0007c0052t0004 a0007c0053t0007 a0012c0018t0001 a0014c0021t0002 a0014c0021t0008 a0015c0035t0001 a0015c0036t0001 a0021c0051t0007 a0026c0025t0003	a0001c0001t0001g0205 a0001c0001t0002g0204 a0001c0014t0001g0038 others(45): Show a0001c0001t0001g0205 a0001c0001t0002g0204 a0001c0014t0001g0038 a0002c0006t0002g0105 a0002c0006t0002g0144 a0002c0008t0001g0026 a0002c0008t0001g0027 a0002c0008t0001g0035 a0002c0008t0001g0037 a0002c0008t0001g0039 a0002c0008t0001g0040 a0002c0008t0009g0034 a0002c0013t0002g0209 a0002c0013t0002g0210 a0002c0017t0001g0196 a0005c0005t0001g0075 a0005c0005t0001g0089 a0005c0005t0001g0090 a0005c0005t0001g0091 a0005c0005t0001g0092 a0005c0005t0001g0093 a0005c0005t0001g0094 a0005c0005t0001g0095 a0005c0005t0001g0096 a0005c0005t0001g0097 a0005c0005t0001g0101 a0005c0005t0002g0103 a0005c0005t0010g0098 a0005c0005t0010g0099 a0005c0037t0001g0100 a0005c0038t0001g0102 a0007c0011t0002g0109 a0007c0011t0003g0114 a0007c0011t0004g0110 a0007c0011t0004g0113 a0007c0011t0011g0112 a0007c0022t0005g0107 a0007c0022t0005g0117 a0007c0052t0004g0116 a0007c0053t0007g0118 a0012c0018t0001g0042 a0012c0018t0001g0043 a0014c0021t0002g0111 a0014c0021t0008g0115 a0015c0035t0001g0088 a0015c0036t0001g0104 a0021c0051t0007g0108 a0026c0025t0003g0024	48	218	0.2202	-5	c.849 others(24): Show c.849+12766_849+12770delGTTTT	CNTLN	ENSG00000044459.15	transcript	ENST00000380647.8	protein_coding	5/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
CNTLN_chr9_17130040_17508923	17277545	TAAGGA TAAGGA	T T	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG00621.hp2 HG00673.hp2 others(32): Show HG00597.hp1 HG00621.hp2 HG00673.hp2 HG02056.hp1 HG02109.hp2 HG02145.hp1 HG02145.hp2 HG02155.hp1 HG02280.hp2 HG02486.hp2 HG02630.hp1 HG02723.hp2 HG02809.hp2 HG02970.hp2 HG02976.hp1 HG03098.hp2 HG03209.hp2 HG03239.hp2 HG03486.hp2 HG04204.hp1 HG04228.hp2 NA18522.hp2 NA18940.hp1 NA18947.hp1 NA18949.hp1 NA18955.hp2 NA18986.hp1 NA19002.hp2 NA19011.hp2 NA19057.hp2 NA19060.hp1 NA19062.hp2 NA19068.hp2 NA19086.hp1 NA19087.hp1	a0004 a0006 a0018 others(4): Show a0004 a0006 a0018 a0023 a0028 a0029 a0030	a0004c0003 a0004c0055 a0006c0007 others(6): Show a0004c0003 a0004c0055 a0006c0007 a0006c0044 a0018c0043 a0023c0026 a0028c0045 a0029c0046 a0030c0024	a0004c0003t0001 a0004c0003t0002 a0004c0003t0016 others(11): Show a0004c0003t0001 a0004c0003t0002 a0004c0003t0016 a0004c0055t0002 a0006c0007t0002 a0006c0007t0006 a0006c0007t0014 a0006c0007t0015 a0006c0044t0002 a0018c0043t0002 a0023c0026t0001 a0028c0045t0001 a0029c0046t0001 a0030c0024t0001	a0004c0003t0001g0051 a0004c0003t0001g0052 a0004c0003t0001g0054 others(32): Show a0004c0003t0001g0051 a0004c0003t0001g0052 a0004c0003t0001g0054 a0004c0003t0001g0055 a0004c0003t0001g0056 a0004c0003t0001g0057 a0004c0003t0001g0059 a0004c0003t0001g0061 a0004c0003t0001g0062 a0004c0003t0001g0067 a0004c0003t0001g0068 a0004c0003t0001g0069 a0004c0003t0001g0071 a0004c0003t0001g0073 a0004c0003t0001g0125 a0004c0003t0002g0064 a0004c0003t0002g0072 a0004c0003t0002g0074 a0004c0003t0016g0070 a0004c0055t0002g0183 a0006c0007t0002g0077 a0006c0007t0002g0078 a0006c0007t0002g0079 a0006c0007t0002g0085 a0006c0007t0002g0086 a0006c0007t0002g0195 a0006c0007t0006g0080 a0006c0007t0014g0087 a0006c0007t0015g0083 a0006c0044t0002g0081 a0018c0043t0002g0084 a0023c0026t0001g0218 a0028c0045t0001g0063 a0029c0046t0001g0060 a0030c0024t0001g0058	35	218	0.1606	-5	c.983 others(22): Show c.983+3683_983+3687delGAAAG	CNTLN	ENSG00000044459.15	transcript	ENST00000380647.8	protein_coding	6/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
CNTLN_chr9_17130040_17508923	17284643	TTTCTC TTTCTC	T T	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG00597.hp2 HG00639.hp1 others(28): Show HG00544.hp2 HG00597.hp2 HG00639.hp1 HG00639.hp2 HG00735.hp2 HG01243.hp1 HG01255.hp1 HG01928.hp2 HG02132.hp2 HG02258.hp1 HG02615.hp2 HG02622.hp1 HG02647.hp2 HG02735.hp1 HG02970.hp1 HG02976.hp2 HG03041.hp1 HG03130.hp2 HG03225.hp1 HG03453.hp1 HG03471.hp1 HG03486.hp1 HG03516.hp1 HG03540.hp1 HG03834.hp1 NA18984.hp2 NA18989.hp1 NA19003.hp1 NA19062.hp1 NA19064.hp2 NA19240.hp2	a0001 a0003 a0009 others(2): Show a0001 a0003 a0009 a0016 a0020	a0001c0058 a0003c0002 a0003c0020 others(4): Show a0001c0058 a0003c0002 a0003c0020 a0009c0009 a0016c0039 a0016c0040 a0020c0041	a0001c0058t0001 a0003c0002t0001 a0003c0002t0002 others(11): Show a0001c0058t0001 a0003c0002t0001 a0003c0002t0002 a0003c0002t0003 a0003c0002t0004 a0003c0002t0006 a0003c0002t0009 a0003c0020t0005 a0009c0009t0001 a0009c0009t0002 a0009c0009t0008 a0016c0039t0001 a0016c0040t0003 a0020c0041t0002	a0001c0058t0001g0021 a0003c0002t0001g0135 a0003c0002t0001g0136 others(28): Show a0001c0058t0001g0021 a0003c0002t0001g0135 a0003c0002t0001g0136 a0003c0002t0001g0139 a0003c0002t0001g0140 a0003c0002t0001g0146 a0003c0002t0001g0149 a0003c0002t0001g0178 a0003c0002t0001g0179 a0003c0002t0001g0189 a0003c0002t0001g0199 a0003c0002t0001g0217 a0003c0002t0002g0148 a0003c0002t0002g0173 a0003c0002t0002g0181 a0003c0002t0002g0188 a0003c0002t0003g0137 a0003c0002t0004g0180 a0003c0002t0006g0198 a0003c0002t0009g0134 a0003c0020t0005g0145 a0003c0020t0005g0154 a0009c0009t0001g0152 a0009c0009t0002g0153 a0009c0009t0002g0186 a0009c0009t0002g0187 a0009c0009t0002g0208 a0009c0009t0008g0185 a0016c0039t0001g0151 a0016c0040t0003g0150 a0020c0041t0002g0147	31	218	0.1422	-5	c.983 others(24): Show c.983+10780_983+10784delCTCTT	CNTLN	ENSG00000044459.15	transcript	ENST00000380647.8	protein_coding	6/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
CNTLN_chr9_17130040_17508923	17299241	CAAAAA CAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG00597.hp2 HG00639.hp1 others(24): Show HG00544.hp2 HG00597.hp2 HG00639.hp1 HG00639.hp2 HG00735.hp2 HG01109.hp1 HG01243.hp1 HG01255.hp1 HG01928.hp2 HG02109.hp1 HG02132.hp2 HG02615.hp2 HG02622.hp1 HG02647.hp2 HG02735.hp1 HG02970.hp1 HG02976.hp2 HG03041.hp1 HG03130.hp2 HG03225.hp1 HG03516.hp1 HG03540.hp1 HG03834.hp1 NA18984.hp2 NA18989.hp1 NA19003.hp1 NA19062.hp1	a0003 a0009 a0013 others(2): Show a0003 a0009 a0013 a0016 a0020	a0003c0002 a0003c0020 a0009c0009 others(4): Show a0003c0002 a0003c0020 a0009c0009 a0013c0019 a0016c0039 a0016c0040 a0020c0041	a0003c0002t0001 a0003c0002t0002 a0003c0002t0009 others(8): Show a0003c0002t0001 a0003c0002t0002 a0003c0002t0009 a0003c0020t0005 a0009c0009t0001 a0009c0009t0002 a0009c0009t0008 a0013c0019t0002 a0016c0039t0001 a0016c0040t0003 a0020c0041t0002	a0003c0002t0001g0135 a0003c0002t0001g0136 a0003c0002t0001g0139 others(24): Show a0003c0002t0001g0135 a0003c0002t0001g0136 a0003c0002t0001g0139 a0003c0002t0001g0140 a0003c0002t0001g0146 a0003c0002t0001g0149 a0003c0002t0001g0178 a0003c0002t0001g0179 a0003c0002t0001g0199 a0003c0002t0001g0217 a0003c0002t0002g0148 a0003c0002t0002g0173 a0003c0002t0002g0188 a0003c0002t0009g0134 a0003c0020t0005g0145 a0003c0020t0005g0154 a0009c0009t0001g0152 a0009c0009t0002g0153 a0009c0009t0002g0186 a0009c0009t0002g0187 a0009c0009t0002g0208 a0009c0009t0008g0185 a0013c0019t0002g0119 a0013c0019t0002g0120 a0016c0039t0001g0151 a0016c0040t0003g0150 a0020c0041t0002g0147	27	218	0.1239	-5	c.114 others(22): Show c.1146+911_1146+915delAAAAA	CNTLN	ENSG00000044459.15	transcript	ENST00000380647.8	protein_coding	7/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
CNTLN_chr9_17130040_17508923	17344150	GTTTAT GTTTAT	G G	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00408.hp2 HG00423.hp2 others(105): Show HG00140.hp2 HG00408.hp2 HG00423.hp2 HG00544.hp1 HG00597.hp1 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00673.hp1 HG00673.hp2 HG00735.hp1 HG00738.hp1 HG01069.hp1 HG01070.hp2 HG01071.hp2 HG01168.hp2 HG01192.hp2 HG01243.hp2 HG01255.hp2 HG01433.hp1 HG01433.hp2 HG01884.hp1 HG01928.hp1 HG01934.hp2 HG01975.hp1 HG01978.hp1 HG02056.hp1 HG02056.hp2 HG02132.hp1 HG02145.hp2 HG02148.hp1 HG02155.hp1 HG02155.hp2 HG02258.hp2 HG02280.hp1 HG02293.hp1 HG02559.hp1 HG02572.hp1 HG02602.hp1 HG02615.hp1 HG02630.hp2 HG02647.hp2 HG02735.hp2 HG02886.hp1 HG02895.hp2 HG02922.hp2 HG02965.hp1 HG02976.hp2 HG03041.hp1 HG03098.hp1 HG03130.hp1 HG03139.hp2 HG03209.hp2 HG03225.hp2 HG03239.hp2 HG03486.hp2 HG03516.hp2 HG03540.hp2 HG03704.hp2 HG04204.hp1 HG04228.hp1 HG04228.hp2 HG06807.hp2 NA18522.hp1 NA18612.hp1 NA18612.hp2 NA18906.hp2 NA18940.hp1 NA18940.hp2 NA18943.hp1 NA18943.hp2 NA18947.hp1 NA18947.hp2 NA18949.hp1 NA18951.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18955.hp2 NA18974.hp2 NA18978.hp1 NA18986.hp1 NA18986.hp2 NA18989.hp2 NA19002.hp1 NA19002.hp2 NA19004.hp1 NA19004.hp2 NA19011.hp2 NA19043.hp1 NA19057.hp2 NA19060.hp1 NA19060.hp2 NA19062.hp2 NA19064.hp1 NA19065.hp1 NA19066.hp2 NA19068.hp2 NA19079.hp1 NA19084.hp1 NA19086.hp1 NA19086.hp2 NA19087.hp1 NA19240.hp1 NA20129.hp2 NA20300.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(11): Show a0001 a0002 a0003 a0004 a0008 a0009 a0010 a0017 a0023 a0025 a0027 a0028 a0029 a0030	a0001c0001 a0001c0004 a0001c0014 others(24): Show a0001c0001 a0001c0004 a0001c0014 a0001c0016 a0001c0023 a0001c0027 a0001c0028 a0001c0029 a0001c0030 a0001c0032 a0001c0050 a0002c0048 a0003c0002 a0003c0020 a0004c0003 a0004c0055 a0008c0010 a0008c0056 a0009c0009 a0010c0034 a0017c0033 a0023c0026 a0025c0057 a0027c0049 a0028c0045 a0029c0046 a0030c0024	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(34): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0007 a0001c0004t0001 a0001c0004t0002 a0001c0004t0003 a0001c0014t0002 a0001c0016t0001 a0001c0023t0003 a0001c0023t0012 a0001c0027t0001 a0001c0028t0004 a0001c0029t0004 a0001c0030t0001 a0001c0032t0006 a0001c0050t0001 a0002c0048t0007 a0003c0002t0001 a0003c0020t0005 a0004c0003t0001 a0004c0003t0002 a0004c0003t0016 a0004c0055t0002 a0008c0010t0002 a0008c0010t0004 a0008c0056t0002 a0009c0009t0001 a0009c0009t0002 a0010c0034t0001 a0017c0033t0001 a0023c0026t0001 a0025c0057t0002 a0027c0049t0001 a0028c0045t0001 a0029c0046t0001 a0030c0024t0001	a0001c0001t0001g0050 a0001c0001t0001g0065 a0001c0001t0001g0082 others(105): Show a0001c0001t0001g0050 a0001c0001t0001g0065 a0001c0001t0001g0082 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0124 a0001c0001t0001g0126 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0167 a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0175 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0001g0194 a0001c0001t0001g0200 a0001c0001t0001g0201 a0001c0001t0001g0202 a0001c0001t0001g0203 a0001c0001t0001g0205 a0001c0001t0002g0127 a0001c0001t0002g0138 a0001c0001t0002g0141 a0001c0001t0002g0163 a0001c0001t0002g0204 a0001c0001t0005g0133 a0001c0001t0007g0166 a0001c0004t0001g0005 a0001c0004t0001g0006 a0001c0004t0001g0007 a0001c0004t0001g0008 a0001c0004t0001g0009 a0001c0004t0001g0010 a0001c0004t0001g0011 a0001c0004t0001g0012 a0001c0004t0001g0013 a0001c0004t0001g0014 a0001c0004t0001g0015 a0001c0004t0001g0022 a0001c0004t0001g0023 a0001c0004t0002g0002 a0001c0004t0002g0017 a0001c0004t0003g0003 a0001c0014t0002g0161 a0001c0014t0002g0162 a0001c0016t0001g0128 a0001c0016t0001g0129 a0001c0016t0001g0168 a0001c0023t0003g0182 a0001c0023t0012g0184 a0001c0027t0001g0143 a0001c0028t0004g0155 a0001c0029t0004g0028 a0001c0030t0001g0197 a0001c0032t0006g0160 a0001c0050t0001g0123 a0002c0048t0007g0216 a0003c0002t0001g0212 a0003c0020t0005g0154 a0004c0003t0001g0051 a0004c0003t0001g0052 a0004c0003t0001g0054 a0004c0003t0001g0055 a0004c0003t0001g0056 a0004c0003t0001g0057 a0004c0003t0001g0059 a0004c0003t0001g0061 a0004c0003t0001g0062 a0004c0003t0001g0067 a0004c0003t0001g0068 a0004c0003t0001g0069 a0004c0003t0001g0071 a0004c0003t0001g0073 a0004c0003t0001g0125 a0004c0003t0001g0211 a0004c0003t0002g0064 a0004c0003t0002g0072 a0004c0003t0002g0074 a0004c0003t0016g0070 a0004c0055t0002g0183 a0008c0010t0002g0001 a0008c0010t0002g0142 a0008c0010t0002g0206 a0008c0010t0004g0207 a0008c0056t0002g0004 a0009c0009t0001g0152 a0009c0009t0002g0153 a0010c0034t0001g0174 a0017c0033t0001g0066 a0023c0026t0001g0218 a0025c0057t0002g0016 a0027c0049t0001g0053 a0028c0045t0001g0063 a0029c0046t0001g0060 a0030c0024t0001g0058	108	218	0.4954	-5	c.188 others(24): Show c.1886+1714_1886+1718delTATTT	CNTLN	ENSG00000044459.15	transcript	ENST00000380647.8	protein_coding	12/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
CNTLN_chr9_17130040_17508923	17370761	AATAAG AATAAG	A A	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG02922.hp1 HG02647.hp1 HG02922.hp1	a0001 a0008 a0001 a0008	a0001c0031 a0008c0010 a0001c0031 a0008c0010	a0001c0031t0002 a0008c0010t0002 a0001c0031t0002 a0008c0010t0002	a0001c0031t0002g0048 a0008c0010t0002g0049 a0001c0031t0002g0048 a0008c0010t0002g0049	2	218	0.0092	-5	c.198 others(24): Show c.1987+4048_1987+4052delAGATA	CNTLN	ENSG00000044459.15	transcript	ENST00000380647.8	protein_coding	13/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
CNTLN_chr9_17130040_17508923	17370972	AGAAAG AGAAAG	A A	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02559.hp2 HG02257.hp2 HG02559.hp2	a0007 a0014 a0007 a0014	a0007c0052 a0014c0021 a0007c0052 a0014c0021	a0007c0052t0004 a0014c0021t0002 a0007c0052t0004 a0014c0021t0002	a0007c0052t0004g0116 a0014c0021t0002g0111 a0007c0052t0004g0116 a0014c0021t0002g0111	2	218	0.0092	-5	c.198 others(24): Show c.1987+4259_1987+4263delAGGAA	CNTLN	ENSG00000044459.15	transcript	ENST00000380647.8	protein_coding	13/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
CNTLN_chr9_17130040_17508923	17495613	GTTAAT GTTAAT	G G	intron_variant intron_variant	MODIFIER	HG01433.hp2 HG01884.hp2 HG03139.hp1 HG01433.hp2 HG01884.hp2 HG03139.hp1	a0001 a0007 a0021 a0001 a0007 a0021	a0001c0001 a0007c0053 a0021c0051 a0001c0001 a0007c0053 a0021c0051	a0001c0001t0007 a0007c0053t0007 a0021c0051t0007 a0001c0001t0007 a0007c0053t0007 a0021c0051t0007	a0001c0001t0007g0166 a0007c0053t0007g0118 a0021c0051t0007g0108 a0001c0001t0007g0166 a0007c0053t0007g0118 a0021c0051t0007g0108	3	218	0.0138	-5	c.412 others(24): Show c.4120-6934_4120-6930delATTTA	CNTLN	ENSG00000044459.15	transcript	ENST00000380647.8	protein_coding	25/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
CNTLN_chr9_17130040_17508923	17500826	TTGTCA TTGTCA	T T	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG02109.hp2 HG02145.hp1 others(20): Show HG01192.hp1 HG02109.hp2 HG02145.hp1 HG02257.hp1 HG02280.hp2 HG02630.hp1 HG02630.hp2 HG02886.hp1 HG02895.hp1 HG02896.hp2 HG02897.hp1 HG02965.hp2 HG02976.hp1 HG03225.hp1 HG03453.hp1 HG03453.hp2 HG03540.hp2 HG03579.hp2 HG06807.hp2 NA18522.hp1 NA19011.hp1 NA19011.hp2 NA20129.hp1	a0001 a0002 a0003 others(7): Show a0001 a0002 a0003 a0004 a0006 a0007 a0010 a0011 a0018 a0025	a0001c0001 a0001c0004 a0001c0014 others(11): Show a0001c0001 a0001c0004 a0001c0014 a0002c0006 a0002c0013 a0003c0002 a0004c0003 a0006c0007 a0006c0044 a0007c0011 a0010c0012 a0011c0015 a0018c0043 a0025c0057	a0001c0001t0002 a0001c0004t0002 a0001c0014t0002 others(11): Show a0001c0001t0002 a0001c0004t0002 a0001c0014t0002 a0002c0006t0002 a0002c0013t0002 a0003c0002t0002 a0004c0003t0002 a0006c0007t0002 a0006c0044t0002 a0007c0011t0002 a0010c0012t0002 a0011c0015t0002 a0018c0043t0002 a0025c0057t0002	a0001c0001t0002g0141 a0001c0004t0002g0002 a0001c0014t0002g0161 others(20): Show a0001c0001t0002g0141 a0001c0004t0002g0002 a0001c0014t0002g0161 a0001c0014t0002g0162 a0002c0006t0002g0032 a0002c0013t0002g0209 a0002c0013t0002g0210 a0003c0002t0002g0181 a0003c0002t0002g0188 a0004c0003t0002g0064 a0006c0007t0002g0077 a0006c0007t0002g0085 a0006c0007t0002g0086 a0006c0044t0002g0081 a0007c0011t0002g0109 a0010c0012t0002g0018 a0010c0012t0002g0019 a0010c0012t0002g0020 a0011c0015t0002g0213 a0011c0015t0002g0214 a0011c0015t0002g0215 a0018c0043t0002g0084 a0025c0057t0002g0016	23	218	0.1055	-5	c.412 others(24): Show c.4120-1723_4120-1719delGTCAT	CNTLN	ENSG00000044459.15	transcript	ENST00000380647.8	protein_coding	25/25		INFO_REALIGN_3_PRIME	chr9	TogoVar
CNTN1_chr12_40687439_41077415	40690769	ATTATT ATTATT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00642.hp1 HG00673.hp2 HG00738.hp2 others(23): Show HG00642.hp1 HG00673.hp2 HG00738.hp2 HG00741.hp1 HG01070.hp1 HG01074.hp1 HG01361.hp2 HG01515.hp1 HG01517.hp2 HG01981.hp2 HG02015.hp1 HG02071.hp2 HG02273.hp1 HG02486.hp2 HG02818.hp1 HG02976.hp1 HG02976.hp2 HG03927.hp1 NA18944.hp2 NA18959.hp2 NA18973.hp2 NA18974.hp2 NA19007.hp1 NA19010.hp1 NA19010.hp2 NA19062.hp1	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0001c0002 a0001c0003 others(4): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0006 a0002c0007 a0004c0010	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0012 a0001c0002t0001 a0001c0003t0005 a0001c0003t0020 a0001c0005t0002 a0001c0006t0006 a0002c0007t0008 a0004c0010t0002	a0001c0001t0001g0049 a0001c0001t0002g0027 a0001c0001t0002g0030 others(23): Show a0001c0001t0001g0049 a0001c0001t0002g0027 a0001c0001t0002g0030 a0001c0001t0002g0045 a0001c0001t0002g0069 a0001c0001t0002g0091 a0001c0001t0002g0094 a0001c0001t0002g0110 a0001c0001t0005g0020 a0001c0001t0012g0012 a0001c0002t0001g0022 a0001c0002t0001g0028 a0001c0002t0001g0032 a0001c0002t0001g0089 a0001c0002t0001g0121 a0001c0002t0001g0145 a0001c0002t0001g0162 a0001c0002t0001g0215 a0001c0003t0005g0071 a0001c0003t0020g0165 a0001c0005t0002g0210 a0001c0006t0006g0051 a0002c0007t0008g0122 a0002c0007t0008g0123 a0002c0007t0008g0192 a0004c0010t0002g0026	26	230	0.1130	-5	c.-18 others(16): Show c.-1899_-1895delTTATT	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding		1669		chr12	TogoVar
CNTN1_chr12_40687439_41077415	40691010	ATTTTT ATTTTT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01109.hp2 HG02055.hp2 HG02109.hp2 others(4): Show HG01109.hp2 HG02055.hp2 HG02109.hp2 HG03130.hp1 HG03139.hp1 HG03209.hp1 HG03654.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0007 a0001c0001 a0002c0007	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(1): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0002c0007t0008	a0001c0001t0001g0223 a0001c0001t0003g0222 a0001c0001t0003g0224 others(4): Show a0001c0001t0001g0223 a0001c0001t0003g0222 a0001c0001t0003g0224 a0001c0001t0004g0054 a0001c0001t0004g0179 a0001c0001t0004g0184 a0002c0007t0008g0186	7	230	0.0304	-5	c.-16 others(16): Show c.-1658_-1654delTTTTT	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding		1428		chr12	TogoVar
CNTN1_chr12_40687439_41077415	40740157	CATGTT CATGTT	C C	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02717.hp2 NA18980.hp1 HG02615.hp1 HG02717.hp2 NA18980.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0003 a0001c0001t0001 a0001c0002t0003	a0001c0001t0001g0076 a0001c0001t0001g0230 a0001c0002t0003g0075 a0001c0001t0001g0076 a0001c0001t0001g0230 a0001c0002t0003g0075	3	230	0.0130	-5	c.-77 others(24): Show c.-77+47568_-77+47572delGTTAT	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding	1/23		INFO_REALIGN_3_PRIME	chr12	TogoVar
CNTN1_chr12_40687439_41077415	40822148	CTTTTT CTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01496.hp2 HG02145.hp1 HG02559.hp1 others(6): Show HG01496.hp2 HG02145.hp1 HG02559.hp1 HG02572.hp2 HG03041.hp1 HG03098.hp2 HG03209.hp2 NA18522.hp1 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0004 a0001c0001 a0001c0003 a0001c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 a0001c0003t0016 a0001c0004t0001 a0001c0004t0003 a0001c0004t0007	a0001c0001t0001g0208 a0001c0001t0002g0059 a0001c0001t0007g0058 others(6): Show a0001c0001t0001g0208 a0001c0001t0002g0059 a0001c0001t0007g0058 a0001c0003t0016g0226 a0001c0004t0001g0217 a0001c0004t0003g0168 a0001c0004t0003g0171 a0001c0004t0007g0057 a0001c0004t0007g0214	9	230	0.0391	-5	c.-76 others(24): Show c.-76-86189_-76-86185delTTTTT	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding	1/23		INFO_REALIGN_3_PRIME	chr12	TogoVar
CNTN1_chr12_40687439_41077415	40831011	TATATA TATATA	T T	intron_variant intron_variant	MODIFIER	HG01123.hp2 HG02895.hp1 HG01123.hp2 HG02895.hp1	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0002 a0001c0005t0002	a0001c0005t0002g0081 a0001c0005t0002g0173 a0001c0005t0002g0081 a0001c0005t0002g0173	2	230	0.0087	-5	c.-76 others(24): Show c.-76-77345_-76-77341delATATA	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding	1/23			chr12	TogoVar
CNTN1_chr12_40687439_41077415	40836262	CATATA CATATA	C C	intron_variant intron_variant	MODIFIER	HG02027.hp2 NA18959.hp1 NA18984.hp2 HG02027.hp2 NA18959.hp1 NA18984.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0001t0001 a0001c0001t0002 a0001c0002t0001	a0001c0001t0001g0043 a0001c0001t0002g0131 a0001c0002t0001g0205 a0001c0001t0001g0043 a0001c0001t0002g0131 a0001c0002t0001g0205	3	230	0.0130	-5	c.-76 others(24): Show c.-76-72090_-76-72086delAATAT	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding	1/23		INFO_REALIGN_3_PRIME	chr12	TogoVar
CNTN1_chr12_40687439_41077415	40920336	AGCTTT AGCTTT	A A	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00280.hp2 HG00408.hp1 others(43): Show HG00140.hp2 HG00280.hp2 HG00408.hp1 HG00408.hp2 HG01070.hp1 HG01123.hp1 HG01175.hp1 HG01256.hp2 HG01258.hp1 HG01361.hp2 HG01433.hp1 HG01496.hp1 HG01515.hp1 HG01981.hp1 HG02004.hp1 HG02015.hp1 HG02027.hp1 HG02071.hp1 HG02818.hp2 HG03130.hp2 HG03239.hp1 HG03704.hp1 HG03834.hp1 HG03927.hp1 HG04115.hp1 NA18522.hp2 NA18747.hp1 NA18906.hp1 NA18943.hp1 NA18944.hp2 NA18950.hp1 NA18953.hp2 NA18957.hp2 NA18959.hp1 NA18970.hp1 NA18974.hp2 NA18984.hp2 NA19006.hp2 NA19007.hp2 NA19010.hp1 NA19012.hp1 NA19062.hp1 NA19079.hp1 NA19083.hp2 NA19090.hp1 NA20129.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0001c0002 a0004c0010 a0001c0001 a0001c0002 a0004c0010	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0009 a0001c0001t0012 a0001c0001t0013 a0001c0001t0018 a0001c0002t0001 a0004c0010t0002	a0001c0001t0001g0007 a0001c0001t0001g0038 a0001c0001t0001g0042 others(43): Show a0001c0001t0001g0007 a0001c0001t0001g0038 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0049 a0001c0001t0001g0101 a0001c0001t0001g0114 a0001c0001t0001g0152 a0001c0001t0001g0206 a0001c0001t0001g0218 a0001c0001t0002g0005 a0001c0001t0002g0011 a0001c0001t0002g0016 a0001c0001t0002g0019 a0001c0001t0002g0027 a0001c0001t0002g0030 a0001c0001t0002g0045 a0001c0001t0002g0069 a0001c0001t0002g0087 a0001c0001t0002g0091 a0001c0001t0002g0094 a0001c0001t0002g0096 a0001c0001t0002g0100 a0001c0001t0002g0113 a0001c0001t0002g0130 a0001c0001t0002g0131 a0001c0001t0002g0141 a0001c0001t0002g0153 a0001c0001t0002g0158 a0001c0001t0002g0159 a0001c0001t0002g0175 a0001c0001t0002g0176 a0001c0001t0002g0180 a0001c0001t0002g0209 a0001c0001t0003g0010 a0001c0001t0003g0120 a0001c0001t0009g0181 a0001c0001t0009g0182 a0001c0001t0009g0183 a0001c0001t0012g0012 a0001c0001t0012g0125 a0001c0001t0013g0211 a0001c0001t0018g0048 a0001c0002t0001g0025 a0001c0002t0001g0090 a0004c0010t0002g0026	46	230	0.2000	-5	c.227 others(22): Show c.227+1573_227+1577delTTTGC	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding	4/23		INFO_REALIGN_3_PRIME	chr12	TogoVar
CNTN1_chr12_40687439_41077415	40952579	TTATAG TTATAG	T T	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG01069.hp2 HG01255.hp1 others(3): Show HG00099.hp1 HG01069.hp2 HG01255.hp1 HG02273.hp1 HG03704.hp2 NA21309.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0006 a0001c0006t0006	a0001c0006t0006g0015 a0001c0006t0006g0017 a0001c0006t0006g0018 others(3): Show a0001c0006t0006g0015 a0001c0006t0006g0017 a0001c0006t0006g0018 a0001c0006t0006g0021 a0001c0006t0006g0051 a0001c0006t0006g0119	6	230	0.0261	-5	c.168 others(24): Show c.1684-6532_1684-6528delTAGTA	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding	14/23		INFO_REALIGN_3_PRIME	chr12	TogoVar
CNTN1_chr12_40687439_41077415	40977764	CTGTTT CTGTTT	C C	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(71): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00323.hp2 HG00621.hp2 HG00642.hp2 HG00673.hp2 HG00733.hp1 HG00735.hp2 HG00738.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01169.hp2 HG01175.hp2 HG01255.hp1 HG01256.hp1 HG01258.hp2 HG01433.hp2 HG02004.hp2 HG02027.hp2 HG02071.hp2 HG02109.hp1 HG02145.hp1 HG02145.hp2 HG02148.hp2 HG02280.hp2 HG02300.hp2 HG02486.hp2 HG02559.hp2 HG02622.hp2 HG02717.hp2 HG02895.hp1 HG02976.hp2 HG03130.hp2 HG03195.hp2 HG03209.hp1 HG03225.hp2 HG03239.hp2 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp2 HG03704.hp2 NA18522.hp1 NA18943.hp2 NA18944.hp1 NA18950.hp2 NA18970.hp2 NA18973.hp2 NA18974.hp1 NA18980.hp2 NA18983.hp1 NA18984.hp1 NA18988.hp2 NA18989.hp1 NA19010.hp2 NA19011.hp1 NA19012.hp2 NA19062.hp2 NA19065.hp1 NA19066.hp2 NA19083.hp1 NA19083.hp2 NA19090.hp2 NA19091.hp2 NA19240.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0005 others(2): Show a0001c0001 a0001c0002 a0001c0005 a0001c0006 a0001c0013	a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 others(13): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 a0001c0001t0013 a0001c0001t0017 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0010 a0001c0002t0022 a0001c0002t0023 a0001c0002t0027 a0001c0005t0002 a0001c0005t0007 a0001c0006t0006 a0001c0013t0001	a0001c0001t0001g0063 a0001c0001t0001g0105 a0001c0001t0001g0212 others(71): Show a0001c0001t0001g0063 a0001c0001t0001g0105 a0001c0001t0001g0212 a0001c0001t0001g0223 a0001c0001t0001g0230 a0001c0001t0002g0059 a0001c0001t0002g0067 a0001c0001t0007g0006 a0001c0001t0007g0058 a0001c0001t0013g0211 a0001c0001t0017g0187 a0001c0002t0001g0001 a0001c0002t0001g0013 a0001c0002t0001g0014 a0001c0002t0001g0024 a0001c0002t0001g0028 a0001c0002t0001g0033 a0001c0002t0001g0034 a0001c0002t0001g0035 a0001c0002t0001g0036 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0047 a0001c0002t0001g0085 a0001c0002t0001g0089 a0001c0002t0001g0090 a0001c0002t0001g0092 a0001c0002t0001g0102 a0001c0002t0001g0103 a0001c0002t0001g0109 a0001c0002t0001g0112 a0001c0002t0001g0116 a0001c0002t0001g0121 a0001c0002t0001g0124 a0001c0002t0001g0129 a0001c0002t0001g0132 a0001c0002t0001g0136 a0001c0002t0001g0142 a0001c0002t0001g0145 a0001c0002t0001g0147 a0001c0002t0001g0149 a0001c0002t0001g0156 a0001c0002t0001g0157 a0001c0002t0001g0161 a0001c0002t0001g0162 a0001c0002t0001g0163 a0001c0002t0001g0169 a0001c0002t0001g0174 a0001c0002t0001g0189 a0001c0002t0001g0194 a0001c0002t0001g0195 a0001c0002t0001g0196 a0001c0002t0001g0197 a0001c0002t0001g0198 a0001c0002t0001g0203 a0001c0002t0001g0205 a0001c0002t0001g0215 a0001c0002t0002g0221 a0001c0002t0003g0060 a0001c0002t0010g0127 a0001c0002t0022g0172 a0001c0002t0023g0144 a0001c0002t0027g0041 a0001c0005t0002g0062 a0001c0005t0002g0081 a0001c0005t0002g0173 a0001c0005t0002g0207 a0001c0005t0007g0148 a0001c0006t0006g0015 a0001c0006t0006g0017 a0001c0006t0006g0018 a0001c0006t0006g0021 a0001c0006t0006g0119 a0001c0013t0001g0050	74	230	0.3217	-5	c.180 others(24): Show c.1805-3092_1805-3088delTTTTG	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding	15/23		INFO_REALIGN_3_PRIME	chr12	TogoVar
CNTN1_chr12_40687439_41077415	40984002	ATATAT ATATAT	A A	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00323.hp1 HG00438.hp1 others(19): Show HG00280.hp1 HG00323.hp1 HG00438.hp1 HG00642.hp1 HG01099.hp1 HG01106.hp2 HG01346.hp2 HG01361.hp1 HG02055.hp1 HG02280.hp1 HG02300.hp1 HG02572.hp2 HG02717.hp1 HG03041.hp2 HG03834.hp2 NA18957.hp1 NA18959.hp2 NA18977.hp2 NA18988.hp1 NA19043.hp1 NA20129.hp2 NA21309.hp2	a0001 a0003 a0001 a0003	a0001c0002 a0001c0003 a0003c0008 a0001c0002 a0001c0003 a0003c0008	a0001c0002t0005 a0001c0003t0002 a0001c0003t0003 others(6): Show a0001c0002t0005 a0001c0003t0002 a0001c0003t0003 a0001c0003t0005 a0001c0003t0011 a0001c0003t0016 a0001c0003t0019 a0001c0003t0020 a0003c0008t0002	a0001c0002t0005g0098 a0001c0003t0002g0108 a0001c0003t0002g0128 others(19): Show a0001c0002t0005g0098 a0001c0003t0002g0108 a0001c0003t0002g0128 a0001c0003t0003g0061 a0001c0003t0003g0064 a0001c0003t0003g0065 a0001c0003t0003g0066 a0001c0003t0005g0070 a0001c0003t0005g0071 a0001c0003t0005g0072 a0001c0003t0005g0082 a0001c0003t0005g0104 a0001c0003t0005g0155 a0001c0003t0005g0178 a0001c0003t0005g0191 a0001c0003t0005g0193 a0001c0003t0011g0199 a0001c0003t0011g0227 a0001c0003t0016g0226 a0001c0003t0019g0056 a0001c0003t0020g0165 a0003c0008t0002g0143	22	230	0.0957	-5	c.196 others(24): Show c.1963+2939_1963+2943delATTAT	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding	16/23		INFO_REALIGN_3_PRIME	chr12	TogoVar
CNTN1_chr12_40687439_41077415	41002107	CTTTTA CTTTTA	C C	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00323.hp1 HG00438.hp1 others(16): Show HG00280.hp1 HG00323.hp1 HG00438.hp1 HG00642.hp1 HG01099.hp1 HG01106.hp2 HG01346.hp2 HG01361.hp1 HG02055.hp1 HG02280.hp1 HG02300.hp1 HG02717.hp1 HG03579.hp1 HG03834.hp2 NA18957.hp1 NA18959.hp2 NA18977.hp2 NA18988.hp1 NA21309.hp2	a0001 a0003 a0001 a0003	a0001c0002 a0001c0003 a0003c0008 a0001c0002 a0001c0003 a0003c0008	a0001c0002t0003 a0001c0002t0005 a0001c0003t0002 others(6): Show a0001c0002t0003 a0001c0002t0005 a0001c0003t0002 a0001c0003t0003 a0001c0003t0005 a0001c0003t0011 a0001c0003t0019 a0001c0003t0020 a0003c0008t0002	a0001c0002t0003g0060 a0001c0002t0005g0098 a0001c0003t0002g0108 others(16): Show a0001c0002t0003g0060 a0001c0002t0005g0098 a0001c0003t0002g0108 a0001c0003t0002g0128 a0001c0003t0003g0061 a0001c0003t0005g0070 a0001c0003t0005g0071 a0001c0003t0005g0072 a0001c0003t0005g0082 a0001c0003t0005g0104 a0001c0003t0005g0155 a0001c0003t0005g0178 a0001c0003t0005g0191 a0001c0003t0005g0193 a0001c0003t0011g0199 a0001c0003t0011g0227 a0001c0003t0019g0056 a0001c0003t0020g0165 a0003c0008t0002g0143	19	230	0.0826	-5	c.211 others(24): Show c.2113+8853_2113+8857delATTTT	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding	17/23		INFO_REALIGN_3_PRIME	chr12	TogoVar
CNTN1_chr12_40687439_41077415	41007045	GTTTTT GTTTTT	G G	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG01123.hp2 HG02055.hp2 others(11): Show HG00738.hp2 HG01123.hp2 HG02055.hp2 HG02109.hp1 HG02145.hp2 HG02257.hp1 HG02486.hp1 HG02886.hp2 HG02895.hp1 HG03540.hp1 HG03834.hp1 NA18522.hp2 NA18906.hp1 NA18964.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0005 a0002c0007 a0001c0001 a0001c0005 a0002c0007	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0014 a0001c0001t0026 a0001c0005t0002 a0002c0007t0008	a0001c0001t0001g0063 a0001c0001t0001g0095 a0001c0001t0002g0011 others(11): Show a0001c0001t0001g0063 a0001c0001t0001g0095 a0001c0001t0002g0011 a0001c0001t0003g0010 a0001c0001t0003g0120 a0001c0001t0003g0200 a0001c0001t0004g0184 a0001c0001t0004g0225 a0001c0001t0014g0074 a0001c0001t0026g0190 a0001c0005t0002g0062 a0001c0005t0002g0081 a0001c0005t0002g0173 a0002c0007t0008g0122	14	230	0.0609	-5	c.211 others(24): Show c.2114-7155_2114-7151delTTTTT	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding	17/23		INFO_REALIGN_3_PRIME	chr12	TogoVar
CNTN1_chr12_40687439_41077415	41033495	TCTTTA TCTTTA	T T	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG03516.hp1 NA18906.hp2 HG00741.hp1 HG03516.hp1 NA18906.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0002 a0001c0005t0025 a0001c0005t0002 a0001c0005t0025	a0001c0005t0002g0053 a0001c0005t0002g0210 a0001c0005t0025g0052 a0001c0005t0002g0053 a0001c0005t0002g0210 a0001c0005t0025g0052	3	230	0.0130	-5	c.298 others(24): Show c.2980+4281_2980+4285delACTTT	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding	23/23		INFO_REALIGN_3_PRIME	chr12	TogoVar
CNTN1_chr12_40687439_41077415	41056886	AATATT AATATT	A A	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG00673.hp1 HG00735.hp1 others(26): Show HG00621.hp1 HG00673.hp1 HG00735.hp1 HG00738.hp2 HG01109.hp1 HG01109.hp2 HG01884.hp1 HG02004.hp1 HG02055.hp2 HG02148.hp1 HG02257.hp1 HG02615.hp2 HG02818.hp1 HG02886.hp1 HG02976.hp1 HG03139.hp1 HG03654.hp1 HG03927.hp2 NA18747.hp2 NA18952.hp1 NA18961.hp2 NA18964.hp1 NA18972.hp1 NA18973.hp1 NA18977.hp1 NA18980.hp1 NA18989.hp2 NA19011.hp2 NA19066.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0007 a0001c0001 a0002c0007	a0001c0001t0001 a0001c0001t0004 a0001c0001t0006 others(1): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0006 a0002c0007t0008	a0001c0001t0001g0037 a0001c0001t0001g0076 a0001c0001t0001g0077 others(26): Show a0001c0001t0001g0037 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0107 a0001c0001t0001g0160 a0001c0001t0001g0201 a0001c0001t0001g0218 a0001c0001t0001g0228 a0001c0001t0004g0029 a0001c0001t0004g0054 a0001c0001t0004g0073 a0001c0001t0004g0086 a0001c0001t0004g0093 a0001c0001t0004g0134 a0001c0001t0004g0137 a0001c0001t0004g0170 a0001c0001t0004g0179 a0001c0001t0004g0184 a0001c0001t0004g0216 a0001c0001t0004g0225 a0001c0001t0006g0106 a0002c0007t0008g0009 a0002c0007t0008g0122 a0002c0007t0008g0123 a0002c0007t0008g0186 a0002c0007t0008g0192	29	230	0.1261	-5	c.298 others(26): Show c.2981-13067_2981-13063delATATT	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding	23/23		INFO_REALIGN_3_PRIME	chr12	TogoVar
CNTN1_chr12_40687439_41077415	41058744	CCAAGG CCAAGG	C C	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG01109.hp2 HG02818.hp1 others(2): Show HG00738.hp2 HG01109.hp2 HG02818.hp1 HG02886.hp1 HG02976.hp1	a0002 a0002	a0002c0007 a0002c0007	a0002c0007t0008 a0002c0007t0008	a0002c0007t0008g0009 a0002c0007t0008g0122 a0002c0007t0008g0123 others(2): Show a0002c0007t0008g0009 a0002c0007t0008g0122 a0002c0007t0008g0123 a0002c0007t0008g0186 a0002c0007t0008g0192	5	230	0.0217	-5	c.298 others(26): Show c.2981-11214_2981-11210delCAAGG	CNTN1	ENSG00000018236.15	transcript	ENST00000551295.7	protein_coding	23/23			chr12	TogoVar
CNTN3_chr3_74257568_74619659	74327105	CCTTTT CCTTTT	C C	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG02735.hp1 HG03017.hp2 others(4): Show HG00438.hp2 HG02735.hp1 HG03017.hp2 HG03669.hp1 NA18956.hp2 NA19085.hp2 NA20752.hp1	a0001 a0012 a0001 a0012	a0001c0001 a0001c0002 a0001c0006 others(1): Show a0001c0001 a0001c0002 a0001c0006 a0012c0020	a0001c0001t0001 a0001c0002t0020 a0001c0006t0001 others(2): Show a0001c0001t0001 a0001c0002t0020 a0001c0006t0001 a0001c0006t0006 a0012c0020t0003	a0001c0001t0001g0111 a0001c0001t0001g0140 a0001c0002t0020g0007 others(4): Show a0001c0001t0001g0111 a0001c0001t0001g0140 a0001c0002t0020g0007 a0001c0006t0001g0142 a0001c0006t0006g0150 a0001c0006t0006g0159 a0012c0020t0003g0026	7	174	0.0402	-5	c.166 others(24): Show c.1668+7625_1668+7629delAAAAG	CNTN3	ENSG00000113805.9	transcript	ENST00000263665.7	protein_coding	13/22			chr3	TogoVar
CNTN3_chr3_74257568_74619659	74348227	AGATAT AGATAT	A A	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02451.hp2 HG02486.hp1 others(9): Show HG02280.hp2 HG02451.hp2 HG02486.hp1 HG02622.hp1 HG02647.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp2 HG03486.hp2 HG03540.hp1 NA19043.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0002 a0002c0004 a0002c0005 others(3): Show a0001c0002 a0002c0004 a0002c0005 a0002c0015 a0003c0003 a0003c0007	a0001c0002t0019 a0002c0004t0028 a0002c0005t0002 others(5): Show a0001c0002t0019 a0002c0004t0028 a0002c0005t0002 a0002c0015t0013 a0003c0003t0002 a0003c0003t0007 a0003c0003t0024 a0003c0007t0007	a0001c0002t0019g0002 a0002c0004t0028g0137 a0002c0005t0002g0037 others(9): Show a0001c0002t0019g0002 a0002c0004t0028g0137 a0002c0005t0002g0037 a0002c0005t0002g0066 a0002c0015t0013g0019 a0003c0003t0002g0033 a0003c0003t0002g0035 a0003c0003t0002g0036 a0003c0003t0007g0020 a0003c0003t0007g0074 a0003c0003t0024g0075 a0003c0007t0007g0073	12	174	0.0690	-5	c.136 others(26): Show c.1365-11574_1365-11570delATATC	CNTN3	ENSG00000113805.9	transcript	ENST00000263665.7	protein_coding	11/22			chr3	TogoVar
CNTN3_chr3_74257568_74619659	74367472	GTCTAA GTCTAA	G G	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01255.hp1 HG01884.hp1 others(11): Show HG01109.hp2 HG01255.hp1 HG01884.hp1 HG01952.hp1 HG02145.hp1 HG02257.hp1 HG02257.hp2 HG02280.hp2 HG02486.hp1 HG02559.hp2 HG02615.hp2 HG02896.hp1 HG03098.hp1 NA18906.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0005 a0002c0015 a0001c0001 a0002c0005 a0002c0015	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(7): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0008 a0001c0001t0009 a0001c0001t0014 a0001c0001t0022 a0002c0005t0002 a0002c0005t0006 a0002c0015t0013	a0001c0001t0001g0099 a0001c0001t0002g0069 a0001c0001t0002g0072 others(11): Show a0001c0001t0001g0099 a0001c0001t0002g0069 a0001c0001t0002g0072 a0001c0001t0002g0082 a0001c0001t0003g0029 a0001c0001t0008g0001 a0001c0001t0009g0084 a0001c0001t0009g0086 a0001c0001t0014g0051 a0001c0001t0022g0013 a0002c0005t0002g0037 a0002c0005t0002g0066 a0002c0005t0006g0160 a0002c0015t0013g0019	14	174	0.0805	-5	c.946 others(22): Show c.946+1712_946+1716delTTAGA	CNTN3	ENSG00000113805.9	transcript	ENST00000263665.7	protein_coding	8/22			chr3	TogoVar
CNTN3_chr3_74257568_74619659	74567314	ATTTTT ATTTTT	A A	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00609.hp2 HG01109.hp2 others(33): Show HG00323.hp2 HG00609.hp2 HG01109.hp2 HG01167.hp2 HG01169.hp2 HG01257.hp2 HG01261.hp2 HG01346.hp1 HG01884.hp1 HG01943.hp1 HG02145.hp2 HG02257.hp1 HG02258.hp1 HG02293.hp1 HG02615.hp1 HG02622.hp1 HG02647.hp1 HG02735.hp2 HG02922.hp1 HG02965.hp2 HG03017.hp1 HG03098.hp1 HG03139.hp1 HG03209.hp2 HG03579.hp2 HG03710.hp1 HG04184.hp2 HG04199.hp2 NA18906.hp2 NA18956.hp1 NA18977.hp2 NA18981.hp1 NA20129.hp2 NA20752.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0005 a0010 a0012	a0001c0001 a0001c0002 a0001c0008 others(7): Show a0001c0001 a0001c0002 a0001c0008 a0001c0009 a0001c0010 a0002c0004 a0003c0026 a0005c0013 a0010c0024 a0012c0020	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(22): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0008 a0001c0001t0009 a0001c0001t0011 a0001c0001t0014 a0001c0001t0018 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0004 a0001c0002t0010 a0001c0002t0012 a0001c0002t0018 a0001c0002t0019 a0001c0008t0015 a0001c0009t0002 a0001c0010t0003 a0002c0004t0028 a0003c0026t0010 a0005c0013t0003 a0010c0024t0002 a0012c0020t0003	a0001c0001t0001g0110 a0001c0001t0001g0118 a0001c0001t0001g0133 others(33): Show a0001c0001t0001g0110 a0001c0001t0001g0118 a0001c0001t0001g0133 a0001c0001t0002g0046 a0001c0001t0003g0023 a0001c0001t0003g0024 a0001c0001t0003g0029 a0001c0001t0004g0092 a0001c0001t0004g0138 a0001c0001t0008g0001 a0001c0001t0008g0003 a0001c0001t0009g0084 a0001c0001t0009g0086 a0001c0001t0011g0008 a0001c0001t0011g0009 a0001c0001t0014g0051 a0001c0001t0018g0173 a0001c0002t0001g0091 a0001c0002t0001g0107 a0001c0002t0001g0132 a0001c0002t0002g0044 a0001c0002t0003g0028 a0001c0002t0003g0047 a0001c0002t0004g0100 a0001c0002t0010g0004 a0001c0002t0012g0011 a0001c0002t0018g0174 a0001c0002t0019g0002 a0001c0008t0015g0030 a0001c0009t0002g0031 a0001c0010t0003g0025 a0002c0004t0028g0137 a0003c0026t0010g0005 a0005c0013t0003g0027 a0010c0024t0002g0054 a0012c0020t0003g0026	36	174	0.2069	-5	c.-80 others(24): Show c.-80-46127_-80-46123delAAAAA	CNTN3	ENSG00000113805.9	transcript	ENST00000263665.7	protein_coding	1/22			chr3	TogoVar
CNTN3_chr3_74257568_74619659	74601054	TATATA TATATA	T T	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG02015.hp2 HG00597.hp1 HG02015.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0002c0004 a0001c0002 a0002c0004	a0001c0002t0002 a0002c0004t0001 a0001c0002t0002 a0002c0004t0001	a0001c0002t0002g0056 a0002c0004t0001g0089 a0001c0002t0002g0056 a0002c0004t0001g0089	2	174	0.0115	-5	c.-81 others(24): Show c.-81+13332_-81+13336delTATAT	CNTN3	ENSG00000113805.9	transcript	ENST00000263665.7	protein_coding	1/22			chr3	TogoVar
CNTN4_chr3_2093866_3062959	2117839	ATTTAT ATTTAT	A A	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG01884.hp1 HG00642.hp1 HG01884.hp1	a0001 a0001	a0001c0005 a0001c0025 a0001c0005 a0001c0025	a0001c0005t0001 a0001c0025t0001 a0001c0005t0001 a0001c0025t0001	a0001c0005t0001g0096 a0001c0025t0001g0100 a0001c0005t0001g0096 a0001c0025t0001g0100	2	116	0.0172	-5	c.-14 others(26): Show c.-145+17203_-145+17207delTATTT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	2/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2253424	GAACGA GAACGA	G G	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG01169.hp1 HG01175.hp2 others(14): Show HG00140.hp2 HG01169.hp1 HG01175.hp2 HG01884.hp2 HG02559.hp1 HG02572.hp1 HG02572.hp2 HG02615.hp1 HG02622.hp2 HG02738.hp1 HG02809.hp1 HG03041.hp1 HG03041.hp2 HG03209.hp1 HG03471.hp1 HG03486.hp2 HG03516.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0001c0002 a0001c0003 others(4): Show a0001c0001 a0001c0002 a0001c0003 a0001c0005 a0001c0006 a0001c0024 a0003c0008	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(11): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0009 a0001c0002t0001 a0001c0002t0005 a0001c0003t0006 a0001c0005t0001 a0001c0005t0006 a0001c0005t0010 a0001c0006t0004 a0001c0024t0015 a0003c0008t0001	a0001c0001t0001g0033 a0001c0001t0002g0028 a0001c0001t0003g0058 others(14): Show a0001c0001t0001g0033 a0001c0001t0002g0028 a0001c0001t0003g0058 a0001c0001t0004g0042 a0001c0001t0004g0081 a0001c0001t0009g0052 a0001c0002t0001g0038 a0001c0002t0001g0110 a0001c0002t0005g0003 a0001c0003t0006g0040 a0001c0005t0001g0104 a0001c0005t0006g0010 a0001c0005t0010g0001 a0001c0005t0010g0085 a0001c0006t0004g0004 a0001c0024t0015g0057 a0003c0008t0001g0084	17	116	0.1466	-5	c.-14 others(26): Show c.-144-85750_-144-85746delGAAAC	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	2/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2260693	GTTTTC GTTTTC	G G	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02486.hp1 HG02451.hp1 HG02486.hp1	a0001 a0006 a0001 a0006	a0001c0001 a0006c0027 a0001c0001 a0006c0027	a0001c0001t0003 a0006c0027t0001 a0001c0001t0003 a0006c0027t0001	a0001c0001t0003g0008 a0006c0027t0001g0007 a0001c0001t0003g0008 a0006c0027t0001g0007	2	116	0.0172	-5	c.-14 others(26): Show c.-144-78465_-144-78461delCTTTT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	2/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2286894	CAAATG CAAATG	C C	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG06807.hp1 HG02258.hp1 HG06807.hp1	a0001 a0001	a0001c0006 a0001c0021 a0001c0006 a0001c0021	a0001c0006t0002 a0001c0021t0002 a0001c0006t0002 a0001c0021t0002	a0001c0006t0002g0026 a0001c0021t0002g0025 a0001c0006t0002g0026 a0001c0021t0002g0025	2	116	0.0172	-5	c.-14 others(26): Show c.-144-52283_-144-52279delAAATG	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	2/24			chr3	TogoVar

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