Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
CNTN4_chr3_2093866_3062959	2291713	ATATTT ATATTT	A A	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG02559.hp2 NA18906.hp2 HG01243.hp2 HG02559.hp2 NA18906.hp2	a0001 a0009 a0001 a0009	a0001c0002 a0001c0006 a0009c0012 a0001c0002 a0001c0006 a0009c0012	a0001c0002t0002 a0001c0006t0002 a0009c0012t0009 a0001c0002t0002 a0001c0006t0002 a0009c0012t0009	a0001c0002t0002g0102 a0001c0006t0002g0051 a0009c0012t0009g0093 a0001c0002t0002g0102 a0001c0006t0002g0051 a0009c0012t0009g0093	3	116	0.0259	-5	c.-14 others(26): Show c.-144-47444_-144-47440delTATTT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	2/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2292623	TTAGAG TTAGAG	T T	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00639.hp2 HG00642.hp1 others(25): Show HG00140.hp1 HG00639.hp2 HG00642.hp1 HG00738.hp1 HG00738.hp2 HG01175.hp2 HG01243.hp2 HG01256.hp2 HG01257.hp1 HG01261.hp1 HG01891.hp1 HG02074.hp2 HG02165.hp2 HG02257.hp2 HG02486.hp2 HG02523.hp2 HG02559.hp2 HG02647.hp1 HG02818.hp1 HG02897.hp1 HG03139.hp1 HG03209.hp1 HG03239.hp2 HG03453.hp1 HG03486.hp1 HG03831.hp2 NA18906.hp2 NA19043.hp2	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0007 a0009	a0001c0001 a0001c0002 a0001c0003 others(9): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0007 a0001c0023 a0002c0017 a0003c0008 a0007c0018 a0009c0012	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(20): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0008 a0001c0002t0001 a0001c0002t0002 a0001c0002t0005 a0001c0002t0007 a0001c0003t0001 a0001c0003t0002 a0001c0003t0006 a0001c0003t0011 a0001c0004t0001 a0001c0004t0002 a0001c0005t0001 a0001c0006t0002 a0001c0006t0004 a0001c0007t0016 a0001c0023t0004 a0002c0017t0008 a0003c0008t0013 a0007c0018t0003 a0009c0012t0009	a0001c0001t0001g0059 a0001c0001t0001g0099 a0001c0001t0002g0055 others(25): Show a0001c0001t0001g0059 a0001c0001t0001g0099 a0001c0001t0002g0055 a0001c0001t0002g0086 a0001c0001t0005g0054 a0001c0001t0005g0115 a0001c0001t0008g0089 a0001c0002t0001g0027 a0001c0002t0001g0029 a0001c0002t0002g0078 a0001c0002t0002g0102 a0001c0002t0005g0002 a0001c0002t0007g0112 a0001c0003t0001g0037 a0001c0003t0002g0061 a0001c0003t0006g0040 a0001c0003t0011g0113 a0001c0004t0001g0106 a0001c0004t0002g0076 a0001c0005t0001g0096 a0001c0006t0002g0051 a0001c0006t0004g0004 a0001c0007t0016g0105 a0001c0023t0004g0041 a0002c0017t0008g0067 a0003c0008t0013g0109 a0007c0018t0003g0062 a0009c0012t0009g0093	28	116	0.2414	-5	c.-14 others(26): Show c.-144-46552_-144-46548delGAGTA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	2/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2338629	ATAAAT ATAAAT	A A	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG00738.hp2 HG01257.hp1 others(8): Show HG00642.hp1 HG00738.hp2 HG01257.hp1 HG01891.hp1 HG02647.hp1 HG03041.hp1 HG03139.hp1 HG03209.hp1 HG03239.hp2 HG03486.hp1 NA19043.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0001c0002 a0001c0004 others(4): Show a0001c0001 a0001c0002 a0001c0004 a0001c0005 a0001c0006 a0001c0023 a0003c0008	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0002t0001 a0001c0004t0001 a0001c0005t0001 a0001c0006t0004 a0001c0023t0004 a0003c0008t0013	a0001c0001t0001g0033 a0001c0001t0001g0059 a0001c0001t0002g0086 others(8): Show a0001c0001t0001g0033 a0001c0001t0001g0059 a0001c0001t0002g0086 a0001c0001t0005g0054 a0001c0001t0005g0115 a0001c0002t0001g0029 a0001c0004t0001g0106 a0001c0005t0001g0096 a0001c0006t0004g0004 a0001c0023t0004g0041 a0003c0008t0013g0109	11	116	0.0948	-5	c.-14 others(22): Show c.-144-547_-144-543delAAATT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	2/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2478408	GTTTTT GTTTTT	G G	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG01891.hp1 HG02451.hp1 others(16): Show HG00438.hp1 HG01891.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02523.hp2 HG02559.hp1 HG02572.hp1 HG02615.hp1 HG02647.hp1 HG02886.hp1 HG02965.hp2 HG03041.hp2 HG03239.hp1 HG03516.hp1 HG06807.hp1 NA18990.hp2 NA19043.hp1 NA19043.hp2	a0001 a0006 a0001 a0006	a0001c0001 a0001c0002 a0001c0003 others(4): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0021 a0006c0027	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(10): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0002t0001 a0001c0003t0001 a0001c0004t0002 a0001c0004t0006 a0001c0005t0001 a0001c0005t0009 a0001c0005t0010 a0001c0021t0002 a0006c0027t0001	a0001c0001t0001g0059 a0001c0001t0002g0074 a0001c0001t0002g0086 others(16): Show a0001c0001t0001g0059 a0001c0001t0002g0074 a0001c0001t0002g0086 a0001c0001t0003g0008 a0001c0001t0003g0095 a0001c0001t0004g0081 a0001c0002t0001g0029 a0001c0002t0001g0110 a0001c0003t0001g0075 a0001c0004t0002g0064 a0001c0004t0002g0076 a0001c0004t0006g0068 a0001c0005t0001g0090 a0001c0005t0001g0092 a0001c0005t0001g0104 a0001c0005t0009g0091 a0001c0005t0010g0001 a0001c0021t0002g0025 a0006c0027t0001g0007	19	116	0.1638	-5	c.-88 others(24): Show c.-88-93000_-88-92996delTTTTT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	3/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2483031	TTGTAC TTGTAC	T T	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG02257.hp2 HG02559.hp2 others(6): Show HG01243.hp2 HG02257.hp2 HG02559.hp2 HG02572.hp2 HG02615.hp2 HG02647.hp2 HG02717.hp1 HG02886.hp2 HG02897.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0006 others(1): Show a0001c0001 a0001c0002 a0001c0006 a0001c0010	a0001c0001t0002 a0001c0001t0003 a0001c0001t0008 others(5): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0008 a0001c0002t0002 a0001c0002t0005 a0001c0002t0007 a0001c0006t0002 a0001c0010t0003	a0001c0001t0002g0030 a0001c0001t0003g0101 a0001c0001t0008g0089 others(6): Show a0001c0001t0002g0030 a0001c0001t0003g0101 a0001c0001t0008g0089 a0001c0002t0002g0102 a0001c0002t0005g0002 a0001c0002t0005g0003 a0001c0002t0007g0009 a0001c0006t0002g0051 a0001c0010t0003g0011	9	116	0.0776	-5	c.-88 others(24): Show c.-88-88381_-88-88377delACTGT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	3/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2520259	CTTTTT CTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01361.hp2 HG02647.hp1 HG02886.hp1 others(1): Show HG01361.hp2 HG02647.hp1 HG02886.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0005 a0001c0001 a0001c0002 a0001c0005	a0001c0001t0001 a0001c0001t0003 a0001c0002t0004 others(1): Show a0001c0001t0001 a0001c0001t0003 a0001c0002t0004 a0001c0005t0009	a0001c0001t0001g0059 a0001c0001t0003g0095 a0001c0002t0004g0017 others(1): Show a0001c0001t0001g0059 a0001c0001t0003g0095 a0001c0002t0004g0017 a0001c0005t0009g0091	4	116	0.0345	-5	c.-88 others(24): Show c.-88-51130_-88-51126delTTTTT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	3/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2575806	CTTCTT CTTCTT	C C	intron_variant intron_variant	MODIFIER	HG02132.hp1 HG02486.hp2 HG02572.hp2 others(2): Show HG02132.hp1 HG02486.hp2 HG02572.hp2 HG02809.hp2 HG03540.hp2	a0001 a0003 a0007 a0001 a0003 a0007	a0001c0001 a0001c0002 a0003c0019 others(1): Show a0001c0001 a0001c0002 a0003c0019 a0007c0018	a0001c0001t0001 a0001c0002t0005 a0001c0002t0007 others(2): Show a0001c0001t0001 a0001c0002t0005 a0001c0002t0007 a0003c0019t0002 a0007c0018t0003	a0001c0001t0001g0012 a0001c0002t0005g0003 a0001c0002t0007g0087 others(2): Show a0001c0001t0001g0012 a0001c0002t0005g0003 a0001c0002t0007g0087 a0003c0019t0002g0031 a0007c0018t0003g0062	5	116	0.0431	-5	c.55+ others(20): Show c.55+4251_55+4255delCTTTT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	4/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2591352	CTTTTT CTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01978.hp2 HG02738.hp2 HG03486.hp2 others(1): Show HG01978.hp2 HG02738.hp2 HG03486.hp2 HG03927.hp2	a0001 a0001	a0001c0002 a0001c0003 a0001c0024 a0001c0002 a0001c0003 a0001c0024	a0001c0002t0002 a0001c0003t0002 a0001c0024t0015 a0001c0002t0002 a0001c0003t0002 a0001c0024t0015	a0001c0002t0002g0035 a0001c0003t0002g0072 a0001c0003t0002g0073 others(1): Show a0001c0002t0002g0035 a0001c0003t0002g0072 a0001c0003t0002g0073 a0001c0024t0015g0057	4	116	0.0345	-5	c.55+ others(22): Show c.55+19820_55+19824delTTTTT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	4/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2604234	GCTAAT GCTAAT	G G	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02622.hp2 HG03130.hp1 HG02572.hp1 HG02622.hp2 HG03130.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0002 a0002c0016 a0003c0008 a0001c0002 a0002c0016 a0003c0008	a0001c0002t0001 a0002c0016t0003 a0003c0008t0001 a0001c0002t0001 a0002c0016t0003 a0003c0008t0001	a0001c0002t0001g0110 a0002c0016t0003g0079 a0003c0008t0001g0084 a0001c0002t0001g0110 a0002c0016t0003g0079 a0003c0008t0001g0084	3	116	0.0259	-5	c.55+ others(22): Show c.55+32679_55+32683delAATCT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	4/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2610150	CTATTT CTATTT	C C	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02572.hp1 HG02622.hp2 others(2): Show HG01243.hp1 HG02572.hp1 HG02622.hp2 HG02886.hp2 HG03130.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0002 a0002c0016 others(1): Show a0001c0001 a0001c0002 a0002c0016 a0003c0008	a0001c0001t0002 a0001c0001t0008 a0001c0002t0001 others(2): Show a0001c0001t0002 a0001c0001t0008 a0001c0002t0001 a0002c0016t0003 a0003c0008t0001	a0001c0001t0002g0030 a0001c0001t0008g0053 a0001c0002t0001g0110 others(2): Show a0001c0001t0002g0030 a0001c0001t0008g0053 a0001c0002t0001g0110 a0002c0016t0003g0079 a0003c0008t0001g0084	5	116	0.0431	-5	c.55+ others(22): Show c.55+38599_55+38603delATTTT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	4/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2750223	CTAATT CTAATT	C C	intron_variant intron_variant	MODIFIER	HG03453.hp2 NA18906.hp2 HG03453.hp2 NA18906.hp2	a0001 a0009 a0001 a0009	a0001c0006 a0009c0012 a0001c0006 a0009c0012	a0001c0006t0002 a0009c0012t0009 a0001c0006t0002 a0009c0012t0009	a0001c0006t0002g0060 a0009c0012t0009g0093 a0001c0006t0002g0060 a0009c0012t0009g0093	2	116	0.0172	-5	c.358 others(22): Show c.358+4529_358+4533delATTTA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	6/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2754817	GTTAAT GTTAAT	G G	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02559.hp1 HG02572.hp1 others(2): Show HG02451.hp1 HG02559.hp1 HG02572.hp1 HG03471.hp2 HG03516.hp1	a0001 a0006 a0001 a0006	a0001c0002 a0001c0005 a0006c0027 a0001c0002 a0001c0005 a0006c0027	a0001c0002t0001 a0001c0005t0001 a0006c0027t0001 a0001c0002t0001 a0001c0005t0001 a0006c0027t0001	a0001c0002t0001g0021 a0001c0002t0001g0110 a0001c0005t0001g0090 others(2): Show a0001c0002t0001g0021 a0001c0002t0001g0110 a0001c0005t0001g0090 a0001c0005t0001g0104 a0006c0027t0001g0007	5	116	0.0431	-5	c.358 others(22): Show c.358+9125_358+9129delTTTAA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	6/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2791003	AAGAGT AAGAGT	A A	intron_variant intron_variant	MODIFIER	HG01257.hp1 HG01257.hp2 HG01258.hp1 others(9): Show HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01978.hp1 HG02258.hp2 HG02451.hp1 HG02572.hp1 HG02647.hp2 HG02897.hp2 HG03516.hp1 HG03927.hp1 NA19043.hp1	a0001 a0006 a0001 a0006	a0001c0001 a0001c0002 a0001c0004 others(4): Show a0001c0001 a0001c0002 a0001c0004 a0001c0005 a0001c0007 a0001c0010 a0006c0027	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(7): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0002t0001 a0001c0004t0001 a0001c0004t0006 a0001c0005t0001 a0001c0007t0003 a0001c0010t0003 a0006c0027t0001	a0001c0001t0001g0050 a0001c0001t0003g0006 a0001c0001t0003g0095 others(9): Show a0001c0001t0001g0050 a0001c0001t0003g0006 a0001c0001t0003g0095 a0001c0001t0005g0098 a0001c0002t0001g0110 a0001c0004t0001g0097 a0001c0004t0001g0106 a0001c0004t0006g0044 a0001c0005t0001g0090 a0001c0007t0003g0034 a0001c0010t0003g0011 a0006c0027t0001g0007	12	116	0.1035	-5	c.359 others(24): Show c.359-28481_359-28477delGAGTA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	6/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2834898	CTTTTT CTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG02258.hp1 HG02486.hp1 others(4): Show HG00738.hp1 HG02258.hp1 HG02486.hp1 HG02647.hp2 HG03209.hp2 HG03486.hp2 NA18906.hp2	a0001 a0009 a0001 a0009	a0001c0001 a0001c0002 a0001c0005 others(4): Show a0001c0001 a0001c0002 a0001c0005 a0001c0006 a0001c0010 a0001c0024 a0009c0012	a0001c0001t0003 a0001c0002t0007 a0001c0005t0006 others(4): Show a0001c0001t0003 a0001c0002t0007 a0001c0005t0006 a0001c0006t0002 a0001c0010t0003 a0001c0024t0015 a0009c0012t0009	a0001c0001t0003g0008 a0001c0002t0007g0112 a0001c0005t0006g0032 others(4): Show a0001c0001t0003g0008 a0001c0002t0007g0112 a0001c0005t0006g0032 a0001c0006t0002g0026 a0001c0010t0003g0011 a0001c0024t0015g0057 a0009c0012t0009g0093	7	116	0.0603	-5	c.454 others(24): Show c.454+15337_454+15341delTTTTT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	7/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2853805	CTGATT CTGATT	C C	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00639.hp2 HG00735.hp2 others(42): Show HG00639.hp1 HG00639.hp2 HG00735.hp2 HG00738.hp2 HG01169.hp2 HG01243.hp1 HG01243.hp2 HG01261.hp2 HG01361.hp1 HG01884.hp1 HG01884.hp2 HG02074.hp2 HG02132.hp2 HG02165.hp2 HG02258.hp2 HG02486.hp2 HG02523.hp2 HG02559.hp1 HG02615.hp2 HG02647.hp1 HG02683.hp1 HG02683.hp2 HG02717.hp2 HG02738.hp1 HG02809.hp1 HG02897.hp1 HG02897.hp2 HG03041.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03209.hp2 HG03239.hp1 HG03453.hp1 HG03516.hp1 HG03516.hp2 HG03654.hp1 HG03831.hp2 HG03927.hp2 NA18906.hp1 NA18906.hp2 NA18990.hp1 NA18990.hp2 NA19043.hp2 NA20300.hp1	a0001 a0002 a0003 others(4): Show a0001 a0002 a0003 a0004 a0005 a0007 a0009	a0001c0001 a0001c0002 a0001c0003 others(12): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0007 a0001c0009 a0001c0025 a0002c0015 a0002c0016 a0003c0008 a0004c0011 a0005c0026 a0007c0018 a0009c0012	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(26): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0008 a0001c0001t0009 a0001c0002t0001 a0001c0002t0002 a0001c0002t0005 a0001c0002t0012 a0001c0003t0001 a0001c0003t0002 a0001c0003t0003 a0001c0003t0011 a0001c0004t0002 a0001c0005t0001 a0001c0005t0006 a0001c0007t0003 a0001c0007t0016 a0001c0009t0014 a0001c0025t0001 a0002c0015t0003 a0002c0016t0003 a0003c0008t0013 a0004c0011t0003 a0005c0026t0017 a0007c0018t0003 a0009c0012t0009	a0001c0001t0001g0033 a0001c0001t0001g0049 a0001c0001t0001g0059 others(42): Show a0001c0001t0001g0033 a0001c0001t0001g0049 a0001c0001t0001g0059 a0001c0001t0002g0086 a0001c0001t0003g0006 a0001c0001t0003g0058 a0001c0001t0003g0101 a0001c0001t0004g0042 a0001c0001t0005g0054 a0001c0001t0008g0043 a0001c0001t0008g0053 a0001c0001t0009g0052 a0001c0002t0001g0027 a0001c0002t0001g0038 a0001c0002t0001g0108 a0001c0002t0002g0035 a0001c0002t0002g0063 a0001c0002t0002g0078 a0001c0002t0002g0102 a0001c0002t0005g0002 a0001c0002t0012g0013 a0001c0003t0001g0045 a0001c0003t0001g0075 a0001c0003t0001g0094 a0001c0003t0001g0116 a0001c0003t0002g0061 a0001c0003t0003g0015 a0001c0003t0011g0113 a0001c0004t0002g0064 a0001c0004t0002g0076 a0001c0005t0001g0090 a0001c0005t0001g0104 a0001c0005t0006g0032 a0001c0007t0003g0034 a0001c0007t0016g0105 a0001c0009t0014g0039 a0001c0025t0001g0100 a0002c0015t0003g0103 a0002c0016t0003g0079 a0003c0008t0013g0109 a0004c0011t0003g0065 a0004c0011t0003g0111 a0005c0026t0017g0047 a0007c0018t0003g0062 a0009c0012t0009g0093	45	116	0.3879	-5	c.455 others(24): Show c.455-12945_455-12941delGATTT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	7/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2894710	TAAAAG TAAAAG	T T	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG02886.hp1 NA18906.hp2 HG02486.hp1 HG02886.hp1 NA18906.hp2	a0001 a0009 a0001 a0009	a0001c0001 a0001c0005 a0009c0012 a0001c0001 a0001c0005 a0009c0012	a0001c0001t0003 a0001c0005t0009 a0009c0012t0009 a0001c0001t0003 a0001c0005t0009 a0009c0012t0009	a0001c0001t0003g0008 a0001c0005t0009g0091 a0009c0012t0009g0093 a0001c0001t0003g0008 a0001c0005t0009g0091 a0009c0012t0009g0093	3	116	0.0259	-5	c.941 others(22): Show c.941-5971_941-5967delAGAAA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	10/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2930372	TATAAC TATAAC	T T	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02258.hp1 HG03453.hp2 others(3): Show HG02257.hp1 HG02258.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG06807.hp1	a0001 a0001	a0001c0005 a0001c0006 a0001c0021 others(2): Show a0001c0005 a0001c0006 a0001c0021 a0001c0022 a0001c0023	a0001c0005t0010 a0001c0006t0002 a0001c0021t0002 others(2): Show a0001c0005t0010 a0001c0006t0002 a0001c0021t0002 a0001c0022t0003 a0001c0023t0004	a0001c0005t0010g0085 a0001c0006t0002g0026 a0001c0006t0002g0060 others(3): Show a0001c0005t0010g0085 a0001c0006t0002g0026 a0001c0006t0002g0060 a0001c0021t0002g0025 a0001c0022t0003g0083 a0001c0023t0004g0041	6	116	0.0517	-5	c.135 others(24): Show c.1358+4597_1358+4601delACATA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	13/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2946699	TTTTTC TTTTTC	T T	intron_variant intron_variant	MODIFIER	HG01361.hp2 HG02257.hp2 HG02615.hp1 others(1): Show HG01361.hp2 HG02257.hp2 HG02615.hp1 HG02622.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0002c0014 a0001c0001 a0001c0002 a0002c0014	a0001c0001t0004 a0001c0001t0008 a0001c0002t0004 others(1): Show a0001c0001t0004 a0001c0001t0008 a0001c0002t0004 a0002c0014t0001	a0001c0001t0004g0081 a0001c0001t0008g0089 a0001c0002t0004g0017 others(1): Show a0001c0001t0004g0081 a0001c0001t0008g0089 a0001c0002t0004g0017 a0002c0014t0001g0016	4	116	0.0345	-5	c.135 others(26): Show c.1358+20925_1358+20929delCTTTT	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	13/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	2983213	CAAAAA CAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02132.hp1 HG02257.hp1 HG02258.hp2 others(4): Show HG02132.hp1 HG02257.hp1 HG02258.hp2 HG03239.hp1 HG03239.hp2 HG03654.hp2 NA18906.hp1	a0001 a0002 a0008 a0001 a0002 a0008	a0001c0001 a0001c0004 a0001c0007 others(3): Show a0001c0001 a0001c0004 a0001c0007 a0001c0022 a0002c0015 a0008c0028	a0001c0001t0001 a0001c0001t0005 a0001c0004t0002 others(4): Show a0001c0001t0001 a0001c0001t0005 a0001c0004t0002 a0001c0007t0003 a0001c0022t0003 a0002c0015t0003 a0008c0028t0001	a0001c0001t0001g0012 a0001c0001t0005g0115 a0001c0004t0002g0064 others(4): Show a0001c0001t0001g0012 a0001c0001t0005g0115 a0001c0004t0002g0064 a0001c0007t0003g0034 a0001c0022t0003g0083 a0002c0015t0003g0103 a0008c0028t0001g0023	7	116	0.0603	-5	c.135 others(24): Show c.1359-5094_1359-5090delAAAAA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	13/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	3003684	CAAAAA CAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02451.hp1 HG02572.hp1 others(3): Show HG01891.hp2 HG02451.hp1 HG02572.hp1 HG02965.hp2 HG03209.hp1 HG03516.hp1	a0001 a0006 a0001 a0006	a0001c0002 a0001c0005 a0001c0006 others(1): Show a0001c0002 a0001c0005 a0001c0006 a0006c0027	a0001c0002t0001 a0001c0005t0001 a0001c0006t0003 others(2): Show a0001c0002t0001 a0001c0005t0001 a0001c0006t0003 a0001c0006t0004 a0006c0027t0001	a0001c0002t0001g0110 a0001c0005t0001g0090 a0001c0005t0001g0092 others(3): Show a0001c0002t0001g0110 a0001c0005t0001g0090 a0001c0005t0001g0092 a0001c0006t0003g0069 a0001c0006t0004g0004 a0006c0027t0001g0007	6	116	0.0517	-5	c.148 others(26): Show c.1486+15238_1486+15242delAAAAA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	14/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	3010465	TAAAAA TAAAAA	T T	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00140.hp2 HG00735.hp1 others(27): Show HG00140.hp1 HG00140.hp2 HG00735.hp1 HG00738.hp1 HG00738.hp2 HG01169.hp2 HG01256.hp1 HG01256.hp2 HG01258.hp2 HG01261.hp2 HG02074.hp2 HG02132.hp1 HG02165.hp1 HG02523.hp2 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02683.hp1 HG02717.hp2 HG02818.hp1 HG03041.hp1 HG03239.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03516.hp2 HG03831.hp1 HG03927.hp1 NA19043.hp1 NA19043.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0001c0002 a0001c0004 others(6): Show a0001c0001 a0001c0002 a0001c0004 a0001c0005 a0001c0007 a0001c0023 a0001c0024 a0002c0017 a0004c0011	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(14): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0008 a0001c0002t0002 a0001c0002t0007 a0001c0004t0001 a0001c0004t0002 a0001c0005t0010 a0001c0007t0004 a0001c0007t0016 a0001c0023t0004 a0001c0024t0015 a0002c0017t0008 a0004c0011t0003	a0001c0001t0001g0012 a0001c0001t0001g0033 a0001c0001t0001g0049 others(27): Show a0001c0001t0001g0012 a0001c0001t0001g0033 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0099 a0001c0001t0002g0028 a0001c0001t0002g0055 a0001c0001t0002g0086 a0001c0001t0003g0095 a0001c0001t0003g0101 a0001c0001t0004g0042 a0001c0001t0004g0081 a0001c0001t0005g0018 a0001c0001t0005g0019 a0001c0001t0005g0054 a0001c0001t0005g0115 a0001c0001t0008g0043 a0001c0002t0002g0063 a0001c0002t0007g0112 a0001c0004t0001g0020 a0001c0004t0001g0036 a0001c0004t0002g0022 a0001c0004t0002g0076 a0001c0005t0010g0085 a0001c0007t0004g0066 a0001c0007t0016g0105 a0001c0023t0004g0041 a0001c0024t0015g0057 a0002c0017t0008g0067 a0004c0011t0003g0111	30	116	0.2586	-5	c.148 others(26): Show c.1487-15623_1487-15619delAAAAA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding	14/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
CNTN4_chr3_2093866_3062959	3060284	TGTTGA TGTTGA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00140.hp1 HG00438.hp1 HG00639.hp1 others(53): Show HG00140.hp1 HG00438.hp1 HG00639.hp1 HG00642.hp1 HG00642.hp2 HG01169.hp2 HG01175.hp2 HG01243.hp2 HG01256.hp1 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp2 HG01361.hp2 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01978.hp1 HG01978.hp2 HG02074.hp1 HG02132.hp1 HG02132.hp2 HG02257.hp1 HG02258.hp1 HG02258.hp2 HG02486.hp1 HG02523.hp1 HG02523.hp2 HG02602.hp1 HG02615.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02717.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp2 HG02965.hp1 HG03130.hp2 HG03139.hp1 HG03209.hp1 HG03209.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03540.hp2 HG03654.hp1 HG03927.hp1 HG03927.hp2 HG06807.hp1 NA18906.hp1 NA18990.hp2 NA19043.hp2 NA20300.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0005	a0001c0001 a0001c0002 a0001c0003 others(14): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0001c0006 a0001c0007 a0001c0009 a0001c0010 a0001c0013 a0001c0021 a0001c0022 a0002c0015 a0003c0008 a0003c0019 a0004c0011 a0005c0026	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(31): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0009 a0001c0002t0001 a0001c0002t0002 a0001c0002t0004 a0001c0002t0007 a0001c0002t0012 a0001c0003t0001 a0001c0003t0002 a0001c0003t0003 a0001c0003t0006 a0001c0004t0001 a0001c0004t0002 a0001c0004t0006 a0001c0005t0001 a0001c0005t0006 a0001c0006t0002 a0001c0006t0003 a0001c0006t0004 a0001c0007t0003 a0001c0009t0004 a0001c0010t0003 a0001c0013t0007 a0001c0021t0002 a0001c0022t0003 a0002c0015t0003 a0003c0008t0013 a0003c0019t0002 a0004c0011t0003 a0005c0026t0017	a0001c0001t0001g0012 a0001c0001t0001g0049 a0001c0001t0001g0050 others(53): Show a0001c0001t0001g0012 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0099 a0001c0001t0002g0074 a0001c0001t0002g0086 a0001c0001t0003g0008 a0001c0001t0003g0058 a0001c0001t0004g0081 a0001c0001t0005g0018 a0001c0001t0005g0019 a0001c0001t0005g0098 a0001c0001t0005g0115 a0001c0001t0009g0052 a0001c0002t0001g0027 a0001c0002t0001g0029 a0001c0002t0001g0108 a0001c0002t0002g0035 a0001c0002t0002g0063 a0001c0002t0002g0102 a0001c0002t0004g0017 a0001c0002t0007g0009 a0001c0002t0007g0080 a0001c0002t0007g0087 a0001c0002t0012g0013 a0001c0003t0001g0014 a0001c0003t0001g0045 a0001c0003t0001g0075 a0001c0003t0001g0094 a0001c0003t0002g0073 a0001c0003t0002g0107 a0001c0003t0003g0015 a0001c0003t0003g0046 a0001c0003t0006g0040 a0001c0004t0001g0097 a0001c0004t0001g0106 a0001c0004t0002g0064 a0001c0004t0002g0076 a0001c0004t0006g0044 a0001c0005t0001g0096 a0001c0005t0006g0032 a0001c0006t0002g0026 a0001c0006t0002g0060 a0001c0006t0003g0069 a0001c0006t0004g0004 a0001c0007t0003g0034 a0001c0009t0004g0005 a0001c0010t0003g0011 a0001c0013t0007g0056 a0001c0021t0002g0025 a0001c0022t0003g0083 a0002c0015t0003g0103 a0003c0008t0013g0109 a0003c0019t0002g0031 a0004c0011t0003g0111 a0005c0026t0017g0047	56	116	0.4828	-5	c.40 others(16): Show c.4065_*4069delGTTGA	CNTN4	ENSG00000144619.15	transcript	ENST00000418658.6	protein_coding		2326		chr3	TogoVar
CNTN5_chr11_99015949_100363885	99028704	CAAGGT CAAGGT	C C	intron_variant intron_variant	MODIFIER	HG00733.hp2 HG01099.hp1 HG01123.hp2 others(7): Show HG00733.hp2 HG01099.hp1 HG01123.hp2 HG01243.hp2 HG01496.hp2 HG01934.hp2 HG02735.hp2 HG02895.hp1 HG02976.hp2 NA19070.hp2	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0008	a0001c0001 a0002c0002 a0003c0003 others(2): Show a0001c0001 a0002c0002 a0003c0003 a0004c0004 a0008c0010	a0001c0001t0004 a0001c0001t0012 a0001c0001t0014 others(5): Show a0001c0001t0004 a0001c0001t0012 a0001c0001t0014 a0002c0002t0005 a0002c0002t0022 a0003c0003t0002 a0004c0004t0001 a0008c0010t0005	a0001c0001t0004g0010 a0001c0001t0012g0018 a0001c0001t0014g0016 others(7): Show a0001c0001t0004g0010 a0001c0001t0012g0018 a0001c0001t0014g0016 a0002c0002t0005g0015 a0002c0002t0022g0013 a0003c0003t0002g0011 a0003c0003t0002g0012 a0003c0003t0002g0061 a0004c0004t0001g0017 a0008c0010t0005g0014	10	66	0.1515	-5	c.-21 others(24): Show c.-210+7437_-210+7441delGGTAA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	1/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99139614	ATCTTT ATCTTT	A A	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01123.hp1 NA20300.hp1 HG01081.hp2 HG01123.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0005 a0001c0001t0010 a0001c0001t0003 a0001c0001t0005 a0001c0001t0010	a0001c0001t0003g0060 a0001c0001t0005g0048 a0001c0001t0010g0047 a0001c0001t0003g0060 a0001c0001t0005g0048 a0001c0001t0010g0047	3	66	0.0455	-5	c.-21 others(28): Show c.-210+118349_-210+118353delTTCTT	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	1/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99193975	ATAGAG ATAGAG	A A	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02602.hp2 HG02257.hp2 HG02602.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0015 a0001c0001t0001 a0001c0001t0015	a0001c0001t0001g0053 a0001c0001t0015g0064 a0001c0001t0001g0053 a0001c0001t0015g0064	2	66	0.0303	-5	c.-20 others(28): Show c.-209-131370_-209-131366delTAGAG	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	1/24			chr11	TogoVar
CNTN5_chr11_99015949_100363885	99332308	CATCTT CATCTT	C C	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG00733.hp2 HG00735.hp1 others(63): Show HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01123.hp1 HG01123.hp2 HG01169.hp1 HG01169.hp2 HG01243.hp1 HG01243.hp2 HG01496.hp1 HG01496.hp2 HG01934.hp1 HG01934.hp2 HG02004.hp1 HG02004.hp2 HG02109.hp1 HG02109.hp2 HG02132.hp1 HG02132.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02602.hp1 HG02602.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02965.hp1 HG02965.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03130.hp1 HG03130.hp2 HG03471.hp1 HG03471.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18939.hp1 NA18939.hp2 NA18957.hp1 NA18957.hp2 NA19000.hp1 NA19000.hp2 NA19043.hp1 NA19043.hp2 NA19070.hp1 NA19070.hp2 NA20300.hp1 NA20300.hp2	a0001 a0002 a0003 others(13): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007 a0008 a0009 a0010 a0011 a0012 a0013 a0014 a0015 a0016	a0001c0001 a0002c0002 a0003c0003 others(13): Show a0001c0001 a0002c0002 a0003c0003 a0004c0004 a0005c0005 a0006c0006 a0007c0011 a0008c0010 a0009c0016 a0010c0013 a0011c0007 a0012c0014 a0013c0008 a0014c0009 a0015c0012 a0016c0015	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(39): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0014 a0001c0001t0015 a0001c0001t0016 a0002c0002t0001 a0002c0002t0003 a0002c0002t0004 a0002c0002t0005 a0002c0002t0008 a0002c0002t0021 a0002c0002t0022 a0003c0003t0002 a0003c0003t0007 a0003c0003t0017 a0004c0004t0001 a0004c0004t0003 a0004c0004t0010 a0004c0004t0018 a0005c0005t0002 a0005c0005t0020 a0006c0006t0001 a0006c0006t0011 a0006c0006t0013 a0006c0006t0014 a0007c0011t0009 a0008c0010t0005 a0009c0016t0019 a0010c0013t0011 a0011c0007t0013 a0012c0014t0008 a0013c0008t0007 a0014c0009t0023 a0015c0012t0005 a0016c0015t0008	a0001c0001t0001g0004 a0001c0001t0001g0008 a0001c0001t0001g0020 others(63): Show a0001c0001t0001g0004 a0001c0001t0001g0008 a0001c0001t0001g0020 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0003g0021 a0001c0001t0003g0022 a0001c0001t0003g0060 a0001c0001t0004g0010 a0001c0001t0004g0029 a0001c0001t0004g0044 a0001c0001t0005g0048 a0001c0001t0006g0032 a0001c0001t0006g0040 a0001c0001t0006g0066 a0001c0001t0009g0043 a0001c0001t0009g0063 a0001c0001t0010g0023 a0001c0001t0010g0047 a0001c0001t0011g0062 a0001c0001t0012g0018 a0001c0001t0012g0030 a0001c0001t0014g0016 a0001c0001t0015g0064 a0001c0001t0016g0049 a0002c0002t0001g0003 a0002c0002t0003g0036 a0002c0002t0003g0037 a0002c0002t0004g0007 a0002c0002t0004g0039 a0002c0002t0005g0015 a0002c0002t0008g0019 a0002c0002t0021g0055 a0002c0002t0022g0013 a0003c0003t0002g0002 a0003c0003t0002g0011 a0003c0003t0002g0012 a0003c0003t0002g0027 a0003c0003t0002g0061 a0003c0003t0007g0034 a0003c0003t0007g0057 a0003c0003t0017g0065 a0004c0004t0001g0017 a0004c0004t0001g0035 a0004c0004t0003g0045 a0004c0004t0010g0006 a0004c0004t0018g0028 a0005c0005t0002g0001 a0005c0005t0002g0041 a0005c0005t0002g0051 a0005c0005t0020g0024 a0006c0006t0001g0005 a0006c0006t0011g0033 a0006c0006t0013g0025 a0006c0006t0014g0058 a0007c0011t0009g0042 a0008c0010t0005g0014 a0009c0016t0019g0059 a0010c0013t0011g0009 a0011c0007t0013g0050 a0012c0014t0008g0026 a0013c0008t0007g0038 a0014c0009t0023g0046 a0015c0012t0005g0056 a0016c0015t0008g0031	66	66	1.0000	-5	c.-71 others(22): Show c.-71+6827_-71+6831delCTTAT	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	2/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99373070	ATGGTG ATGGTG	A A	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG00735.hp1 HG01081.hp2 others(4): Show HG00733.hp1 HG00735.hp1 HG01081.hp2 HG01123.hp2 HG01496.hp2 HG02257.hp2 NA19043.hp1	a0001 a0003 a0007 others(1): Show a0001 a0003 a0007 a0015	a0001c0001 a0003c0003 a0007c0011 others(1): Show a0001c0001 a0003c0003 a0007c0011 a0015c0012	a0001c0001t0009 a0001c0001t0010 a0001c0001t0012 others(4): Show a0001c0001t0009 a0001c0001t0010 a0001c0001t0012 a0001c0001t0015 a0003c0003t0002 a0007c0011t0009 a0015c0012t0005	a0001c0001t0009g0063 a0001c0001t0010g0047 a0001c0001t0012g0018 others(4): Show a0001c0001t0009g0063 a0001c0001t0010g0047 a0001c0001t0012g0018 a0001c0001t0015g0064 a0003c0003t0002g0012 a0007c0011t0009g0042 a0015c0012t0005g0056	7	66	0.1061	-5	c.-71 others(24): Show c.-71+47587_-71+47591delTGGTG	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	2/24			chr11	TogoVar
CNTN5_chr11_99015949_100363885	99388982	CTTATT CTTATT	C C	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01099.hp1 HG01123.hp1 others(11): Show HG01081.hp2 HG01099.hp1 HG01123.hp1 HG01169.hp1 HG02109.hp1 HG02723.hp2 HG02735.hp1 HG02895.hp2 HG02976.hp1 HG06807.hp2 NA18939.hp2 NA18957.hp1 NA19000.hp2 NA20300.hp2	a0001 a0003 a0004 others(4): Show a0001 a0003 a0004 a0005 a0011 a0014 a0016	a0001c0001 a0003c0003 a0004c0004 others(4): Show a0001c0001 a0003c0003 a0004c0004 a0005c0005 a0011c0007 a0014c0009 a0016c0015	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(9): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0001t0009 a0001c0001t0010 a0003c0003t0007 a0004c0004t0010 a0005c0005t0002 a0011c0007t0013 a0014c0009t0023 a0016c0015t0008	a0001c0001t0001g0020 a0001c0001t0001g0052 a0001c0001t0003g0060 others(11): Show a0001c0001t0001g0020 a0001c0001t0001g0052 a0001c0001t0003g0060 a0001c0001t0004g0010 a0001c0001t0004g0044 a0001c0001t0006g0032 a0001c0001t0009g0043 a0001c0001t0010g0047 a0003c0003t0007g0034 a0004c0004t0010g0006 a0005c0005t0002g0001 a0011c0007t0013g0050 a0014c0009t0023g0046 a0016c0015t0008g0031	14	66	0.2121	-5	c.-71 others(24): Show c.-71+63556_-71+63560delATTTT	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	2/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99403008	CTTTTT CTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00733.hp2 HG00738.hp2 HG01081.hp1 others(10): Show HG00733.hp2 HG00738.hp2 HG01081.hp1 HG01243.hp1 HG02976.hp2 HG03041.hp1 HG03471.hp2 NA18522.hp2 NA18957.hp1 NA18957.hp2 NA19000.hp1 NA19070.hp2 NA20300.hp1	a0001 a0002 a0003 others(4): Show a0001 a0002 a0003 a0004 a0005 a0006 a0012	a0001c0001 a0002c0002 a0003c0003 others(4): Show a0001c0001 a0002c0002 a0003c0003 a0004c0004 a0005c0005 a0006c0006 a0012c0014	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 others(10): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0001t0014 a0002c0002t0004 a0002c0002t0022 a0003c0003t0002 a0003c0003t0007 a0004c0004t0001 a0004c0004t0018 a0005c0005t0002 a0006c0006t0014 a0012c0014t0008	a0001c0001t0001g0052 a0001c0001t0004g0029 a0001c0001t0005g0048 others(10): Show a0001c0001t0001g0052 a0001c0001t0004g0029 a0001c0001t0005g0048 a0001c0001t0014g0016 a0002c0002t0004g0039 a0002c0002t0022g0013 a0003c0003t0002g0002 a0003c0003t0007g0057 a0004c0004t0001g0017 a0004c0004t0018g0028 a0005c0005t0002g0041 a0006c0006t0014g0058 a0012c0014t0008g0026	13	66	0.1970	-5	c.-71 others(24): Show c.-71+77536_-71+77540delTTTTT	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	2/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99432459	TCTTTC TCTTTC	T T	intron_variant intron_variant	MODIFIER	HG02132.hp1 HG02735.hp1 HG02132.hp1 HG02735.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0016 a0001c0001t0006 a0001c0001t0016	a0001c0001t0006g0032 a0001c0001t0016g0049 a0001c0001t0006g0032 a0001c0001t0016g0049	2	66	0.0303	-5	c.-71 others(26): Show c.-71+106980_-71+106984delCCTTT	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	2/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99433371	ATGTGT ATGTGT	A A	intron_variant intron_variant	MODIFIER	HG00733.hp2 HG00735.hp1 HG00738.hp2 others(7): Show HG00733.hp2 HG00735.hp1 HG00738.hp2 HG01099.hp1 HG01123.hp2 HG01243.hp2 HG01496.hp2 HG02004.hp2 HG02602.hp2 NA18957.hp1	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0005 a0007 a0008	a0001c0001 a0002c0002 a0003c0003 others(3): Show a0001c0001 a0002c0002 a0003c0003 a0005c0005 a0007c0011 a0008c0010	a0001c0001t0001 a0001c0001t0004 a0001c0001t0012 others(5): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0012 a0002c0002t0022 a0003c0003t0002 a0005c0005t0002 a0007c0011t0009 a0008c0010t0005	a0001c0001t0001g0004 a0001c0001t0001g0052 a0001c0001t0001g0053 others(7): Show a0001c0001t0001g0004 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0004g0010 a0001c0001t0012g0018 a0002c0002t0022g0013 a0003c0003t0002g0012 a0005c0005t0002g0041 a0007c0011t0009g0042 a0008c0010t0005g0014	10	66	0.1515	-5	c.-71 others(26): Show c.-71+107888_-71+107892delTGTGT	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	2/24			chr11	TogoVar
CNTN5_chr11_99015949_100363885	99448730	TTTTTA TTTTTA	T T	intron_variant intron_variant	MODIFIER	HG00733.hp2 HG01099.hp1 HG03130.hp2 others(2): Show HG00733.hp2 HG01099.hp1 HG03130.hp2 NA18957.hp1 NA20300.hp2	a0001 a0002 a0016 a0001 a0002 a0016	a0001c0001 a0002c0002 a0016c0015 a0001c0001 a0002c0002 a0016c0015	a0001c0001t0001 a0001c0001t0004 a0001c0001t0006 others(2): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0006 a0002c0002t0022 a0016c0015t0008	a0001c0001t0001g0052 a0001c0001t0004g0010 a0001c0001t0006g0040 others(2): Show a0001c0001t0001g0052 a0001c0001t0004g0010 a0001c0001t0006g0040 a0002c0002t0022g0013 a0016c0015t0008g0031	5	66	0.0758	-5	c.-70 others(26): Show c.-70-107355_-70-107351delATTTT	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	2/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99523597	GATAGA GATAGA	G G	intron_variant intron_variant	MODIFIER	HG01123.hp1 HG01496.hp1 HG02109.hp1 others(2): Show HG01123.hp1 HG01496.hp1 HG02109.hp1 HG02886.hp1 NA18522.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0002c0002 a0003c0003 others(1): Show a0001c0001 a0002c0002 a0003c0003 a0004c0004	a0001c0001t0003 a0002c0002t0021 a0003c0003t0002 others(2): Show a0001c0001t0003 a0002c0002t0021 a0003c0003t0002 a0003c0003t0007 a0004c0004t0010	a0001c0001t0003g0060 a0002c0002t0021g0055 a0003c0003t0002g0027 others(2): Show a0001c0001t0003g0060 a0002c0002t0021g0055 a0003c0003t0002g0027 a0003c0003t0007g0057 a0004c0004t0010g0006	5	66	0.0758	-5	c.-70 others(24): Show c.-70-32496_-70-32492delTAGAA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	2/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99523649	TAGAAC TAGAAC	T T	intron_variant intron_variant	MODIFIER	HG02004.hp1 HG03130.hp2 NA19043.hp1 HG02004.hp1 HG03130.hp2 NA19043.hp1	a0001 a0015 a0001 a0015	a0001c0001 a0015c0012 a0001c0001 a0015c0012	a0001c0001t0001 a0001c0001t0006 a0015c0012t0005 a0001c0001t0001 a0001c0001t0006 a0015c0012t0005	a0001c0001t0001g0054 a0001c0001t0006g0040 a0015c0012t0005g0056 a0001c0001t0001g0054 a0001c0001t0006g0040 a0015c0012t0005g0056	3	66	0.0455	-5	c.-70 others(24): Show c.-70-32487_-70-32483delACAGA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	2/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99523663	TCAGAA TCAGAA	T T	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG00738.hp1 HG01081.hp1 others(8): Show HG00733.hp1 HG00738.hp1 HG01081.hp1 HG01081.hp2 HG01099.hp2 HG01243.hp1 HG02004.hp1 HG02735.hp2 HG02976.hp2 HG03130.hp1 HG06807.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0002c0002 a0003c0003 others(1): Show a0001c0001 a0002c0002 a0003c0003 a0004c0004	a0001c0001t0001 a0001c0001t0009 a0001c0001t0010 others(5): Show a0001c0001t0001 a0001c0001t0009 a0001c0001t0010 a0002c0002t0003 a0002c0002t0004 a0003c0003t0002 a0004c0004t0001 a0004c0004t0018	a0001c0001t0001g0020 a0001c0001t0001g0054 a0001c0001t0009g0063 others(8): Show a0001c0001t0001g0020 a0001c0001t0001g0054 a0001c0001t0009g0063 a0001c0001t0010g0047 a0002c0002t0003g0036 a0002c0002t0003g0037 a0002c0002t0004g0039 a0003c0003t0002g0061 a0004c0004t0001g0017 a0004c0004t0001g0035 a0004c0004t0018g0028	11	66	0.1667	-5	c.-70 others(24): Show c.-70-32451_-70-32447delCAGAA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	2/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99523704	CAGAAT CAGAAT	C C	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG00733.hp2 HG00735.hp2 others(41): Show HG00733.hp1 HG00733.hp2 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01169.hp1 HG01243.hp1 HG01243.hp2 HG01496.hp1 HG01934.hp1 HG02004.hp1 HG02109.hp1 HG02109.hp2 HG02132.hp1 HG02132.hp2 HG02258.hp1 HG02258.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp2 HG02886.hp2 HG02895.hp1 HG02965.hp1 HG02965.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp2 HG03130.hp1 HG03471.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18939.hp2 NA18957.hp2 NA19000.hp1 NA19000.hp2 NA19043.hp2 NA19070.hp2 NA20300.hp1 NA20300.hp2	a0001 a0002 a0003 others(7): Show a0001 a0002 a0003 a0004 a0005 a0006 a0008 a0010 a0014 a0016	a0001c0001 a0002c0002 a0003c0003 others(7): Show a0001c0001 a0002c0002 a0003c0003 a0004c0004 a0005c0005 a0006c0006 a0008c0010 a0010c0013 a0014c0009 a0016c0015	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(28): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0014 a0001c0001t0016 a0002c0002t0003 a0002c0002t0004 a0002c0002t0005 a0002c0002t0008 a0002c0002t0021 a0002c0002t0022 a0003c0003t0002 a0003c0003t0007 a0004c0004t0001 a0004c0004t0003 a0004c0004t0010 a0004c0004t0018 a0005c0005t0002 a0005c0005t0020 a0006c0006t0011 a0006c0006t0013 a0006c0006t0014 a0008c0010t0005 a0010c0013t0011 a0014c0009t0023 a0016c0015t0008	a0001c0001t0001g0008 a0001c0001t0001g0020 a0001c0001t0001g0054 others(41): Show a0001c0001t0001g0008 a0001c0001t0001g0020 a0001c0001t0001g0054 a0001c0001t0003g0021 a0001c0001t0003g0022 a0001c0001t0004g0010 a0001c0001t0004g0029 a0001c0001t0004g0044 a0001c0001t0005g0048 a0001c0001t0009g0043 a0001c0001t0009g0063 a0001c0001t0010g0023 a0001c0001t0010g0047 a0001c0001t0011g0062 a0001c0001t0012g0030 a0001c0001t0014g0016 a0001c0001t0016g0049 a0002c0002t0003g0036 a0002c0002t0003g0037 a0002c0002t0004g0007 a0002c0002t0004g0039 a0002c0002t0005g0015 a0002c0002t0008g0019 a0002c0002t0021g0055 a0002c0002t0022g0013 a0003c0003t0002g0002 a0003c0003t0002g0061 a0003c0003t0007g0034 a0004c0004t0001g0017 a0004c0004t0001g0035 a0004c0004t0003g0045 a0004c0004t0010g0006 a0004c0004t0018g0028 a0005c0005t0002g0001 a0005c0005t0002g0041 a0005c0005t0002g0051 a0005c0005t0020g0024 a0006c0006t0011g0033 a0006c0006t0013g0025 a0006c0006t0014g0058 a0008c0010t0005g0014 a0010c0013t0011g0009 a0014c0009t0023g0046 a0016c0015t0008g0031	44	66	0.6667	-5	c.-70 others(24): Show c.-70-32419_-70-32415delGAATA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	2/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99584972	AAAACT AAAACT	A A	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG00738.hp2 HG01081.hp1 others(26): Show HG00733.hp1 HG00738.hp2 HG01081.hp1 HG01081.hp2 HG01123.hp2 HG01169.hp1 HG01169.hp2 HG01496.hp2 HG01934.hp1 HG01934.hp2 HG02004.hp1 HG02004.hp2 HG02132.hp1 HG02132.hp2 HG02257.hp2 HG02258.hp2 HG02602.hp1 HG02602.hp2 HG02735.hp1 HG02735.hp2 HG02976.hp2 HG03130.hp1 HG06807.hp2 NA18522.hp1 NA18939.hp1 NA18939.hp2 NA18957.hp1 NA19000.hp1 NA19070.hp2	a0001 a0002 a0003 others(4): Show a0001 a0002 a0003 a0004 a0005 a0006 a0014	a0001c0001 a0002c0002 a0003c0003 others(4): Show a0001c0001 a0002c0002 a0003c0003 a0004c0004 a0005c0005 a0006c0006 a0014c0009	a0001c0001t0001 a0001c0001t0006 a0001c0001t0009 others(15): Show a0001c0001t0001 a0001c0001t0006 a0001c0001t0009 a0001c0001t0010 a0001c0001t0012 a0001c0001t0014 a0001c0001t0015 a0001c0001t0016 a0002c0002t0004 a0003c0003t0002 a0003c0003t0017 a0004c0004t0001 a0004c0004t0003 a0004c0004t0018 a0005c0005t0002 a0006c0006t0001 a0006c0006t0014 a0014c0009t0023	a0001c0001t0001g0004 a0001c0001t0001g0020 a0001c0001t0001g0052 others(26): Show a0001c0001t0001g0004 a0001c0001t0001g0020 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0006g0032 a0001c0001t0006g0066 a0001c0001t0009g0043 a0001c0001t0009g0063 a0001c0001t0010g0047 a0001c0001t0012g0018 a0001c0001t0012g0030 a0001c0001t0014g0016 a0001c0001t0015g0064 a0001c0001t0016g0049 a0002c0002t0004g0007 a0003c0003t0002g0011 a0003c0003t0002g0012 a0003c0003t0002g0061 a0003c0003t0017g0065 a0004c0004t0001g0017 a0004c0004t0001g0035 a0004c0004t0003g0045 a0004c0004t0018g0028 a0005c0005t0002g0041 a0005c0005t0002g0051 a0006c0006t0001g0005 a0006c0006t0014g0058 a0014c0009t0023g0046	29	66	0.4394	-5	c.55+ others(22): Show c.55+28707_55+28711delCTAAA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	3/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99613675	TTATAG TTATAG	T T	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01496.hp1 HG01934.hp1 others(12): Show HG01243.hp2 HG01496.hp1 HG01934.hp1 HG02004.hp1 HG02602.hp2 HG02723.hp1 HG02723.hp2 HG02965.hp1 HG02976.hp1 HG03041.hp2 HG03130.hp2 NA18939.hp2 NA19070.hp2 NA20300.hp1 NA20300.hp2	a0001 a0002 a0003 others(4): Show a0001 a0002 a0003 a0006 a0008 a0014 a0016	a0001c0001 a0002c0002 a0003c0003 others(4): Show a0001c0001 a0002c0002 a0003c0003 a0006c0006 a0008c0010 a0014c0009 a0016c0015	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 others(10): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0010 a0001c0001t0012 a0001c0001t0014 a0002c0002t0021 a0003c0003t0007 a0006c0006t0011 a0008c0010t0005 a0014c0009t0023 a0016c0015t0008	a0001c0001t0001g0008 a0001c0001t0001g0053 a0001c0001t0001g0054 others(12): Show a0001c0001t0001g0008 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0004g0044 a0001c0001t0005g0048 a0001c0001t0006g0040 a0001c0001t0010g0023 a0001c0001t0012g0030 a0001c0001t0014g0016 a0002c0002t0021g0055 a0003c0003t0007g0034 a0006c0006t0011g0033 a0008c0010t0005g0014 a0014c0009t0023g0046 a0016c0015t0008g0031	15	66	0.2273	-5	c.55+ others(22): Show c.55+57409_55+57413delTAGTA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	3/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99619361	CATAAT CATAAT	C C	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG02258.hp2 HG01081.hp1 HG02258.hp2	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0003 a0004c0004t0018 a0004c0004t0003 a0004c0004t0018	a0004c0004t0003g0045 a0004c0004t0018g0028 a0004c0004t0003g0045 a0004c0004t0018g0028	2	66	0.0303	-5	c.55+ others(22): Show c.55+63096_55+63100delATATA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	3/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99637010	CAAAAA CAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02258.hp2 HG02895.hp1 others(1): Show HG02258.hp1 HG02258.hp2 HG02895.hp1 NA20300.hp1	a0001 a0002 a0004 others(1): Show a0001 a0002 a0004 a0010	a0001c0001 a0002c0002 a0004c0004 others(1): Show a0001c0001 a0002c0002 a0004c0004 a0010c0013	a0001c0001t0005 a0002c0002t0005 a0004c0004t0003 others(1): Show a0001c0001t0005 a0002c0002t0005 a0004c0004t0003 a0010c0013t0011	a0001c0001t0005g0048 a0002c0002t0005g0015 a0004c0004t0003g0045 others(1): Show a0001c0001t0005g0048 a0002c0002t0005g0015 a0004c0004t0003g0045 a0010c0013t0011g0009	4	66	0.0606	-5	c.55+ others(22): Show c.55+80768_55+80772delAAAAA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	3/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99675013	GGTTTT GGTTTT	G G	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02895.hp1 NA20300.hp1 HG02258.hp1 HG02895.hp1 NA20300.hp1	a0001 a0002 a0010 a0001 a0002 a0010	a0001c0001 a0002c0002 a0010c0013 a0001c0001 a0002c0002 a0010c0013	a0001c0001t0005 a0002c0002t0005 a0010c0013t0011 a0001c0001t0005 a0002c0002t0005 a0010c0013t0011	a0001c0001t0005g0048 a0002c0002t0005g0015 a0010c0013t0011g0009 a0001c0001t0005g0048 a0002c0002t0005g0015 a0010c0013t0011g0009	3	66	0.0455	-5	c.55+ others(24): Show c.55+118774_55+118778delTGTTT	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	3/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99682300	AAAGAG AAAGAG	A A	intron_variant intron_variant	MODIFIER	HG01169.hp1 HG01934.hp2 HG01169.hp1 HG01934.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0009 a0003c0003t0002 a0001c0001t0009 a0003c0003t0002	a0001c0001t0009g0043 a0003c0003t0002g0011 a0001c0001t0009g0043 a0003c0003t0002g0011	2	66	0.0303	-5	c.55+ others(24): Show c.55+126038_55+126042delAGAGA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	3/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99725540	TTTGCC TTTGCC	T T	intron_variant intron_variant	MODIFIER	HG00733.hp2 HG00735.hp1 HG00738.hp2 others(40): Show HG00733.hp2 HG00735.hp1 HG00738.hp2 HG01081.hp1 HG01099.hp1 HG01123.hp2 HG01169.hp1 HG01169.hp2 HG01243.hp1 HG01243.hp2 HG01496.hp1 HG01496.hp2 HG01934.hp2 HG02004.hp1 HG02004.hp2 HG02109.hp1 HG02257.hp1 HG02257.hp2 HG02258.hp2 HG02602.hp2 HG02723.hp1 HG02735.hp1 HG02735.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp2 HG02965.hp1 HG02976.hp1 HG03041.hp1 HG03041.hp2 HG03130.hp1 HG03130.hp2 HG03471.hp1 NA18522.hp1 NA18522.hp2 NA18939.hp1 NA18939.hp2 NA18957.hp1 NA19000.hp1 NA19043.hp1 NA19070.hp1 NA19070.hp2 NA20300.hp2	a0001 a0002 a0003 others(12): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007 a0008 a0009 a0011 a0012 a0013 a0014 a0015 a0016	a0001c0001 a0002c0002 a0003c0003 others(12): Show a0001c0001 a0002c0002 a0003c0003 a0004c0004 a0005c0005 a0006c0006 a0007c0011 a0008c0010 a0009c0016 a0011c0007 a0012c0014 a0013c0008 a0014c0009 a0015c0012 a0016c0015	a0001c0001t0001 a0001c0001t0004 a0001c0001t0006 others(30): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0006 a0001c0001t0009 a0001c0001t0010 a0001c0001t0012 a0001c0001t0014 a0001c0001t0015 a0002c0002t0001 a0002c0002t0004 a0002c0002t0021 a0002c0002t0022 a0003c0003t0002 a0003c0003t0007 a0003c0003t0017 a0004c0004t0001 a0004c0004t0003 a0004c0004t0010 a0004c0004t0018 a0005c0005t0002 a0005c0005t0020 a0006c0006t0001 a0006c0006t0011 a0006c0006t0014 a0007c0011t0009 a0008c0010t0005 a0009c0016t0019 a0011c0007t0013 a0012c0014t0008 a0013c0008t0007 a0014c0009t0023 a0015c0012t0005 a0016c0015t0008	a0001c0001t0001g0004 a0001c0001t0001g0008 a0001c0001t0001g0052 others(40): Show a0001c0001t0001g0004 a0001c0001t0001g0008 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0004g0010 a0001c0001t0006g0032 a0001c0001t0006g0040 a0001c0001t0009g0043 a0001c0001t0010g0023 a0001c0001t0012g0018 a0001c0001t0014g0016 a0001c0001t0015g0064 a0002c0002t0001g0003 a0002c0002t0004g0007 a0002c0002t0004g0039 a0002c0002t0021g0055 a0002c0002t0022g0013 a0003c0003t0002g0011 a0003c0003t0002g0012 a0003c0003t0002g0027 a0003c0003t0002g0061 a0003c0003t0007g0034 a0003c0003t0007g0057 a0003c0003t0017g0065 a0004c0004t0001g0035 a0004c0004t0003g0045 a0004c0004t0010g0006 a0004c0004t0018g0028 a0005c0005t0002g0041 a0005c0005t0020g0024 a0006c0006t0001g0005 a0006c0006t0011g0033 a0006c0006t0014g0058 a0007c0011t0009g0042 a0008c0010t0005g0014 a0009c0016t0019g0059 a0011c0007t0013g0050 a0012c0014t0008g0026 a0013c0008t0007g0038 a0014c0009t0023g0046 a0015c0012t0005g0056 a0016c0015t0008g0031	43	66	0.6515	-5	c.56- others(22): Show c.56-93996_56-93992delGCCTT	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	3/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99744543	TAAAAA TAAAAA	T T	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG01081.hp1 HG01099.hp2 others(5): Show HG00738.hp1 HG01081.hp1 HG01099.hp2 HG02004.hp1 HG02109.hp1 HG02109.hp2 HG02258.hp2 HG02965.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0002c0002 a0004c0004 a0001c0001 a0002c0002 a0004c0004	a0001c0001t0001 a0001c0001t0003 a0002c0002t0003 others(3): Show a0001c0001t0001 a0001c0001t0003 a0002c0002t0003 a0004c0004t0003 a0004c0004t0010 a0004c0004t0018	a0001c0001t0001g0054 a0001c0001t0003g0021 a0001c0001t0003g0022 others(5): Show a0001c0001t0001g0054 a0001c0001t0003g0021 a0001c0001t0003g0022 a0002c0002t0003g0036 a0002c0002t0003g0037 a0004c0004t0003g0045 a0004c0004t0010g0006 a0004c0004t0018g0028	8	66	0.1212	-5	c.56- others(22): Show c.56-74975_56-74971delAAAAA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	3/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99794238	AGCAAT AGCAAT	A A	intron_variant intron_variant	MODIFIER	HG02132.hp2 NA18939.hp2 NA19000.hp2 HG02132.hp2 NA18939.hp2 NA19000.hp2	a0005 a0014 a0005 a0014	a0005c0005 a0014c0009 a0005c0005 a0014c0009	a0005c0005t0002 a0014c0009t0023 a0005c0005t0002 a0014c0009t0023	a0005c0005t0002g0001 a0005c0005t0002g0051 a0014c0009t0023g0046 a0005c0005t0002g0001 a0005c0005t0002g0051 a0014c0009t0023g0046	3	66	0.0455	-5	c.56- others(22): Show c.56-25305_56-25301delGCAAT	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	3/24			chr11	TogoVar
CNTN5_chr11_99015949_100363885	99839112	TAAAAC TAAAAC	T T	intron_variant intron_variant	MODIFIER	HG01123.hp1 HG02109.hp2 HG02965.hp2 HG01123.hp1 HG02109.hp2 HG02965.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0021 a0001c0001t0003g0022 a0001c0001t0003g0060 a0001c0001t0003g0021 a0001c0001t0003g0022 a0001c0001t0003g0060	3	66	0.0455	-5	c.278 others(22): Show c.278-5736_278-5732delACAAA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	4/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99841891	TATATA TATATA	T T	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG01169.hp1 HG01934.hp1 others(9): Show HG01081.hp1 HG01169.hp1 HG01934.hp1 HG02257.hp1 HG02258.hp2 HG02602.hp1 HG02602.hp2 HG03471.hp2 HG06807.hp1 NA18957.hp1 NA20300.hp1 NA20300.hp2	a0001 a0004 a0006 others(2): Show a0001 a0004 a0006 a0009 a0016	a0001c0001 a0004c0004 a0006c0006 others(2): Show a0001c0001 a0004c0004 a0006c0006 a0009c0016 a0016c0015	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 others(8): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0009 a0001c0001t0012 a0004c0004t0003 a0004c0004t0018 a0006c0006t0013 a0009c0016t0019 a0016c0015t0008	a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0004g0029 others(9): Show a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0004g0029 a0001c0001t0005g0048 a0001c0001t0006g0066 a0001c0001t0009g0043 a0001c0001t0012g0030 a0004c0004t0003g0045 a0004c0004t0018g0028 a0006c0006t0013g0025 a0009c0016t0019g0059 a0016c0015t0008g0031	12	66	0.1818	-5	c.278 others(22): Show c.278-2960_278-2956delATATA	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	4/24			chr11	TogoVar
CNTN5_chr11_99015949_100363885	99841892	ATATAT ATATAT	A A	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG00735.hp1 HG02257.hp2 others(2): Show HG00733.hp1 HG00735.hp1 HG02257.hp2 HG02723.hp2 HG02735.hp2	a0001 a0003 a0007 a0001 a0003 a0007	a0001c0001 a0003c0003 a0007c0011 a0001c0001 a0003c0003 a0007c0011	a0001c0001t0004 a0001c0001t0009 a0001c0001t0015 others(2): Show a0001c0001t0004 a0001c0001t0009 a0001c0001t0015 a0003c0003t0002 a0007c0011t0009	a0001c0001t0004g0044 a0001c0001t0009g0063 a0001c0001t0015g0064 others(2): Show a0001c0001t0004g0044 a0001c0001t0009g0063 a0001c0001t0015g0064 a0003c0003t0002g0061 a0007c0011t0009g0042	5	66	0.0758	-5	c.278 others(22): Show c.278-2958_278-2954delATATT	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	4/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99919802	ATTTAT ATTTAT	A A	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG00735.hp2 HG00738.hp1 others(19): Show HG00735.hp1 HG00735.hp2 HG00738.hp1 HG01099.hp2 HG01243.hp1 HG01243.hp2 HG01934.hp2 HG02004.hp2 HG02109.hp1 HG02257.hp1 HG02602.hp1 HG02735.hp1 HG02895.hp2 HG02965.hp1 HG03041.hp1 HG03041.hp2 HG03130.hp1 HG03471.hp2 NA18939.hp1 NA19000.hp2 NA19070.hp2 NA20300.hp2	a0001 a0002 a0003 others(9): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007 a0008 a0009 a0011 a0012 a0016	a0001c0001 a0002c0002 a0003c0003 others(9): Show a0001c0001 a0002c0002 a0003c0003 a0004c0004 a0005c0005 a0006c0006 a0007c0011 a0008c0010 a0009c0016 a0011c0007 a0012c0014 a0016c0015	a0001c0001t0001 a0001c0001t0004 a0001c0001t0006 others(17): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0006 a0001c0001t0010 a0001c0001t0011 a0001c0001t0014 a0002c0002t0003 a0002c0002t0004 a0003c0003t0002 a0003c0003t0017 a0004c0004t0001 a0004c0004t0010 a0005c0005t0002 a0006c0006t0011 a0007c0011t0009 a0008c0010t0005 a0009c0016t0019 a0011c0007t0013 a0012c0014t0008 a0016c0015t0008	a0001c0001t0001g0004 a0001c0001t0004g0029 a0001c0001t0006g0032 others(19): Show a0001c0001t0001g0004 a0001c0001t0004g0029 a0001c0001t0006g0032 a0001c0001t0006g0066 a0001c0001t0010g0023 a0001c0001t0011g0062 a0001c0001t0014g0016 a0002c0002t0003g0036 a0002c0002t0003g0037 a0002c0002t0004g0039 a0003c0003t0002g0011 a0003c0003t0017g0065 a0004c0004t0001g0035 a0004c0004t0010g0006 a0005c0005t0002g0001 a0006c0006t0011g0033 a0007c0011t0009g0042 a0008c0010t0005g0014 a0009c0016t0019g0059 a0011c0007t0013g0050 a0012c0014t0008g0026 a0016c0015t0008g0031	22	66	0.3333	-5	c.673 others(22): Show c.673+3686_673+3690delTATTT	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	7/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
CNTN5_chr11_99015949_100363885	99945483	TCTGTG TCTGTG	T T	intron_variant intron_variant	MODIFIER	HG02976.hp2 NA19043.hp2 HG02976.hp2 NA19043.hp2	a0002 a0004 a0002 a0004	a0002c0002 a0004c0004 a0002c0002 a0004c0004	a0002c0002t0008 a0004c0004t0001 a0002c0002t0008 a0004c0004t0001	a0002c0002t0008g0019 a0004c0004t0001g0017 a0002c0002t0008g0019 a0004c0004t0001g0017	2	66	0.0303	-5	c.674 others(24): Show c.674-11321_674-11317delTGTGC	CNTN5	ENSG00000149972.12	transcript	ENST00000524871.6	protein_coding	7/24		INFO_REALIGN_3_PRIME	chr11	TogoVar

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