regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GALNT9_chr12_132191372_132334589 | 132233502 | CCCTAGTG others(568): Show |
C | intron_variant | MODIFIER | NA18945.hp1 | a0001 | a0001c0009 | a0001c0009t0002 | a0001c0009t0002g0177 | 1 | 183 | 0.0055 | -575 | c.107 others(21): Show |
GALNT9 | ENSG00000182870.13 | transcript | ENST00000328957.13 | protein_coding | 6/10 | chr12 | TogoVar | ||||||
MAD1L1_chr7_1810795_2237945 | 2058452 | AGGCTGGA others(568): Show |
A | intron_variant | MODIFIER | NA18963.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0085 | 1 | 264 | 0.0038 | -575 | c.121 others(21): Show |
MAD1L1 | ENSG00000002822.16 | transcript | ENST00000265854.12 | protein_coding | 12/18 | chr7 | TogoVar | ||||||
NKD2_chr5_1003802_1043943 | 1026001 | TCAGCCCA others(568): Show |
T | intron_variant | MODIFIER | HG00099.hp2 HG00323.hp2 HG00438.hp1 others(87): Show |
a0001a0002a0004others(1): Show | a0001c0001a0001c0002a0001c0008others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(17): Show | a0001c0001t0001g0001a0001c0001t0001g0010a0001c0001t0001g0012others(76): Show | 90 | 319 | 0.2821 | -575 | c.142 others(17): Show |
NKD2 | ENSG00000145506.14 | transcript | ENST00000296849.10 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PRDM15_chr21_41793225_41884344 | 41844607 | TCCCCCTC others(568): Show |
T | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp1 |
a0001 | a0001c0001 | a0001c0001t0017 | a0001c0001t0017g0160a0001c0001t0017g0161 | 2 | 406 | 0.0049 | -575 | c.640 others(17): Show |
PRDM15 | ENSG00000141956.14 | transcript | ENST00000398548.6 | protein_coding | 6/23 | chr21 | TogoVar | ||||||
RASA3_chr13_113972783_114137623 | 114006700 | TCCCCCCT others(568): Show |
T | intron_variant | MODIFIER | HG03471.hp1 | a0001 | a0001c0011 | a0001c0011t0001 | a0001c0011t0001g0042 | 1 | 67 | 0.0149 | -575 | c.174 others(17): Show |
RASA3 | ENSG00000185989.11 | transcript | ENST00000334062.8 | protein_coding | 18/23 | chr13 | TogoVar | ||||||
DGKB_chr7_14140049_14907751 | 14211748 | ATTTACTC others(567): Show |
A | intron_variant | MODIFIER | HG02258.hp2 | a0002 | a0002c0005 | a0002c0005t0011 | a0002c0005t0011g0062 | 1 | 148 | 0.0068 | -574 | c.212 others(21): Show |
DGKB | ENSG00000136267.14 | transcript | ENST00000402815.6 | protein_coding | 23/25 | chr7 | TogoVar | ||||||
DGKB_chr7_14140049_14907751 | 14211801 | ATGTTTTG others(567): Show |
A | intron_variant | MODIFIER | HG03130.hp1 | a0001 | a0001c0008 | a0001c0008t0003 | a0001c0008t0003g0077 | 1 | 148 | 0.0068 | -574 | c.212 others(21): Show |
DGKB | ENSG00000136267.14 | transcript | ENST00000402815.6 | protein_coding | 23/25 | chr7 | TogoVar | ||||||
JPH2_chr20_44101590_44192188 | 44161632 | CTCTGAAA others(567): Show |
C | intron_variant | MODIFIER | NA18962.hp2 NA19066.hp2 |
a0001 | a0001c0001a0001c0006 | a0001c0001t0049a0001c0006t0105 | a0001c0001t0049g0076a0001c0006t0105g0313 | 2 | 338 | 0.0059 | -574 | c.380 others(17): Show |
JPH2 | ENSG00000149596.7 | transcript | ENST00000372980.4 | protein_coding | 1/5 | chr20 | TogoVar | ||||||
NWD2_chr4_37239743_37454463 | 37330789 | GTACAATA others(567): Show |
G | intron_variant | MODIFIER | HG00408.hp2 HG00597.hp2 HG00609.hp2 others(43): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0004others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(11): Show | a0001c0001t0001g0010a0001c0001t0001g0011a0001c0001t0001g0012others(43): Show | 46 | 296 | 0.1554 | -574 | c.240 others(17): Show |
NWD2 | ENSG00000174145.8 | transcript | ENST00000309447.6 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
PARVB_chr22_44019302_44177939 | 44094540 | GGTGCGGT others(567): Show |
G | intron_variant | MODIFIER | HG02809.hp2 HG06807.hp1 |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0014 | a0001c0001t0005g0204a0001c0001t0014g0196 | 2 | 332 | 0.0060 | -574 | c.202 others(16): Show |
PARVB | ENSG00000188677.15 | transcript | ENST00000338758.12 | protein_coding | 2/12 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | |||||
PCMT1_chr6_149744741_149816419 | 149762543 | TCTATGAT others(567): Show |
T | intron_variant | MODIFIER | HG01109.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0155 | 1 | 334 | 0.0030 | -574 | c.56- others(15): Show |
PCMT1 | ENSG00000120265.21 | transcript | ENST00000464889.7 | protein_coding | 1/7 | chr6 | TogoVar | ||||||
PTPRD_chr9_8309246_10618002 | 9933698 | GAATTGAA others(567): Show |
G | intron_variant | MODIFIER | HG02559.hp2 | a0001 | a0001c0005 | a0001c0005t0001 | a0001c0005t0001g0019 | 1 | 34 | 0.0294 | -574 | c.-36 others(19): Show |
PTPRD | ENSG00000153707.19 | transcript | ENST00000381196.9 | protein_coding | 5/45 | chr9 | TogoVar | ||||||
SGTA_chr19_2749715_2788273 | 2773408 | TCCGAGGG others(567): Show |
T | intron_variant | MODIFIER | HG01243.hp1 HG02257.hp1 HG02970.hp2 |
a0001 | a0001c0003 | a0001c0003t0003 | a0001c0003t0003g0014a0001c0003t0003g0051 | 3 | 396 | 0.0076 | -574 | c.-23 others(17): Show |
SGTA | ENSG00000104969.11 | transcript | ENST00000221566.7 | protein_coding | 1/11 | chr19 | TogoVar | ||||||
SHOX_chrX_625791_656584 | 647604 | GGCCTCCC others(567): Show |
G | 3_prime_UTR_variant | MODIFIER | HG01891.hp1 HG02109.hp1 HG02970.hp2 others(1): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0090a0001c0001t0096a0001c0003t0190others(1): Show | a0001c0001t0090g0084a0001c0001t0096g0121a0001c0003t0190g0123others(1): Show | 4 | 220 | 0.0182 | -574 | c.*30 others(11): Show |
SHOX | ENSG00000185960.15 | transcript | ENST00000686671.1 | protein_coding | 5/5 | 3037 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||
TWIST2_chr2_238843085_238915534 | 238880515 | AGTGTGTT others(567): Show |
A | intron_variant | MODIFIER | HG02622.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0293 | 1 | 338 | 0.0030 | -574 | c.*36 others(19): Show |
TWIST2 | ENSG00000233608.5 | transcript | ENST00000612363.2 | protein_coding | 1/1 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
ZNF516_chr18_76352682_76500242 | 76392812 | AAGGCAGG others(567): Show |
A | intron_variant | MODIFIER | HG00609.hp1 | a0001 | a0001c0001 | a0001c0001t0018 | a0001c0001t0018g0199 | 1 | 346 | 0.0029 | -574 | c.181 others(21): Show |
ZNF516 | ENSG00000101493.11 | transcript | ENST00000443185.7 | protein_coding | 3/6 | chr18 | TogoVar | ||||||
CACNA1H_chr16_1148106_1226768 | 1190979 | TTTCGGTG others(566): Show |
T | intron_variant | MODIFIER | HG02055.hp1 HG02572.hp1 HG03579.hp2 |
a0001a0003a0030 | a0001c0001a0003c0028a0030c0067 | a0001c0001t0001a0003c0028t0004a0030c0067t0020 | a0001c0001t0001g0322a0003c0028t0004g0325a0030c0067t0020g0323 | 3 | 338 | 0.0089 | -573 | c.300 others(17): Show |
CACNA1H | ENSG00000196557.14 | transcript | ENST00000348261.11 | protein_coding | 2/34 | chr16 | TogoVar | ||||||
CACNA1H_chr16_1148106_1226768 | 1191298 | CTTACTCA others(566): Show |
C | intron_variant | MODIFIER | HG01109.hp2 | a0001 | a0001c0031 | a0001c0031t0001 | a0001c0031t0001g0217 | 1 | 338 | 0.0030 | -573 | c.300 others(17): Show |
CACNA1H | ENSG00000196557.14 | transcript | ENST00000348261.11 | protein_coding | 2/34 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |||||
EDIL3_chr5_83935554_84389880 | 84113206 | GGTAGTCT others(566): Show |
G | intron_variant | MODIFIER | HG02683.hp2 | a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0017 | 1 | 158 | 0.0063 | -573 | c.470 others(17): Show |
EDIL3 | ENSG00000164176.13 | transcript | ENST00000296591.10 | protein_coding | 5/10 | chr5 | TogoVar | ||||||
EIF3B_chr7_2349827_2385745 | 2377465 | GATGGAGG others(566): Show |
G | intron_variant | MODIFIER | HG01099.hp2 HG01175.hp2 HG01981.hp2 others(4): Show |
a0001a0002a0007 | a0001c0001a0001c0003a0002c0002others(1): Show | a0001c0001t0005a0001c0003t0001a0002c0002t0001others(1): Show | a0001c0001t0005g0008a0001c0001t0005g0180a0001c0003t0001g0223others(3): Show | 7 | 384 | 0.0182 | -573 | c.215 others(17): Show |
EIF3B | ENSG00000106263.19 | transcript | ENST00000360876.9 | protein_coding | 15/18 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |||||
FER_chr5_108742897_109201841 | 108969615 | TTGAACAC others(566): Show |
T | intron_variant | MODIFIER | HG03139.hp1 | a0003 | a0003c0009 | a0003c0009t0002 | a0003c0009t0002g0058 | 1 | 138 | 0.0073 | -573 | c.165 others(21): Show |
FER | ENSG00000151422.14 | transcript | ENST00000281092.9 | protein_coding | 13/19 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
GALNT9_chr12_132191372_132334589 | 132234592 | AGACAGCG others(566): Show |
A | intron_variant | MODIFIER | HG02895.hp2 HG03486.hp1 |
a0001 | a0001c0001a0001c0026 | a0001c0001t0001a0001c0026t0014 | a0001c0001t0001g0149a0001c0026t0014g0052 | 2 | 183 | 0.0109 | -573 | c.107 others(21): Show |
GALNT9 | ENSG00000182870.13 | transcript | ENST00000328957.13 | protein_coding | 6/10 | chr12 | TogoVar | ||||||
LAMP1_chr13_113292239_113328672 | 113314053 | CCCGTGTG others(566): Show |
C | intron_variant | MODIFIER | NA19010.hp1 | a0002 | a0002c0002 | a0002c0002t0002 | a0002c0002t0002g0021 | 1 | 354 | 0.0028 | -573 | c.562 others(17): Show |
LAMP1 | ENSG00000185896.11 | transcript | ENST00000332556.5 | protein_coding | 4/8 | chr13 | TogoVar | ||||||
OTUD7A_chr15_31470398_31875673 | 31510730 | AACATACA others(566): Show |
A | intron_variant | MODIFIER | HG02896.hp1 HG02897.hp1 |
a0001 | a0001c0002 | a0001c0002t0024 | a0001c0002t0024g0217a0001c0002t0024g0218 | 2 | 244 | 0.0082 | -573 | c.894 others(17): Show |
OTUD7A | ENSG00000169918.10 | transcript | ENST00000307050.6 | protein_coding | 8/12 | chr15 | TogoVar | ||||||
RABEP1_chr17_5277284_5391340 | 5374099 | ATCTGTCA others(566): Show |
A | intron_variant | MODIFIER | HG02965.hp2 HG03041.hp1 |
a0001 | a0001c0004 | a0001c0004t0012 | a0001c0004t0012g0164a0001c0004t0012g0165 | 2 | 352 | 0.0057 | -573 | c.202 others(18): Show |
RABEP1 | ENSG00000029725.17 | transcript | ENST00000537505.6 | protein_coding | 13/17 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
SLC12A7_chr5_1045384_1117063 | 1071000 | GAGCCCCC others(566): Show |
G | intron_variant | MODIFIER | NA19011.hp1 | a0001 | a0001c0009 | a0001c0009t0002 | a0001c0009t0002g0114 | 1 | 118 | 0.0085 | -573 | c.224 others(19): Show |
SLC12A7 | ENSG00000113504.21 | transcript | ENST00000264930.10 | protein_coding | 17/23 | chr5 | TogoVar | ||||||
SLC66A2_chr18_79897420_79956653 | 79919702 | CAGGAACC others(566): Show |
C | intron_variant | MODIFIER | HG02723.hp1 HG03486.hp1 |
a0001 | a0001c0001 | a0001c0001t0007a0001c0001t0021 | a0001c0001t0007g0269a0001c0001t0021g0268 | 2 | 352 | 0.0057 | -573 | c.392 others(15): Show |
SLC66A2 | ENSG00000122490.19 | transcript | ENST00000397778.7 | protein_coding | 4/5 | chr18 | TogoVar | ||||||
SLC66A2_chr18_79897420_79956653 | 79920619 | AGGAACCG others(566): Show |
A | intron_variant | MODIFIER | HG01243.hp1 HG01243.hp2 HG01891.hp1 others(18): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0015a0001c0001t0023others(1): Show | a0001c0001t0002g0006a0001c0001t0002g0007a0001c0001t0002g0149others(16): Show | 21 | 352 | 0.0597 | -573 | c.392 others(17): Show |
SLC66A2 | ENSG00000122490.19 | transcript | ENST00000397778.7 | protein_coding | 4/5 | chr18 | TogoVar | ||||||
TDRD12_chr19_32714767_32834580 | 32729359 | GGGTATCT others(566): Show |
G | intron_variant | MODIFIER | NA18956.hp1 | a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0136 | 1 | 380 | 0.0026 | -573 | c.25- others(15): Show |
TDRD12 | ENSG00000173809.18 | transcript | ENST00000639142.2 | protein_coding | 1/32 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | |||||
ABCC4_chr13_95014835_95306451 | 95185628 | CACACTGC others(565): Show |
C | intron_variant | MODIFIER | HG02630.hp1 | a0002 | a0002c0072 | a0002c0072t0002 | a0002c0072t0002g0041 | 1 | 248 | 0.0040 | -572 | c.154 others(18): Show |
ABCC4 | ENSG00000125257.16 | transcript | ENST00000645237.2 | protein_coding | 11/30 | chr13 | TogoVar | ||||||
ABR_chr17_998519_1184981 | 1052434 | TTCACAGG others(565): Show |
T | intron_variant | MODIFIER | HG02015.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0148 | 1 | 337 | 0.0030 | -572 | c.156 others(19): Show |
ABR | ENSG00000159842.16 | transcript | ENST00000302538.10 | protein_coding | 14/22 | chr17 | TogoVar | ||||||
ABR_chr17_998519_1184981 | 1052522 | TTCACAGG others(565): Show |
T | intron_variant | MODIFIER | HG03710.hp1 | a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0255 | 1 | 337 | 0.0030 | -572 | c.156 others(19): Show |
ABR | ENSG00000159842.16 | transcript | ENST00000302538.10 | protein_coding | 14/22 | chr17 | TogoVar | ||||||
ABR_chr17_998519_1184981 | 1052815 | GGGGCTGG others(565): Show |
G | intron_variant | MODIFIER | HG00639.hp2 HG02080.hp1 HG02698.hp2 others(5): Show |
a0001 | a0001c0001a0001c0007 | a0001c0001t0002a0001c0001t0004a0001c0001t0006others(4): Show | a0001c0001t0002g0084a0001c0001t0004g0293a0001c0001t0006g0075others(5): Show | 8 | 337 | 0.0237 | -572 | c.156 others(19): Show |
ABR | ENSG00000159842.16 | transcript | ENST00000302538.10 | protein_coding | 14/22 | chr17 | TogoVar | ||||||
ANKRD30B_chr18_14743172_14859667 | 14858104 | CTCCCAGA others(565): Show |
C | downstream_gene_variant | MODIFIER | HG01106.hp1 HG01255.hp2 |
a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0275a0001c0001t0003g0279 | 2 | 316 | 0.0063 | -572 | c.*39 others(11): Show |
ANKRD30B | ENSG00000180777.15 | transcript | ENST00000690538.1 | protein_coding | 3438 | chr18 | TogoVar | ||||||
DIRAS1_chr19_2709567_2726372 | 2713669 | CCACCTCC others(565): Show |
C | downstream_gene_variant | MODIFIER | HG04115.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0004 | 1 | 412 | 0.0024 | -572 | c.*29 others(11): Show |
DIRAS1 | ENSG00000176490.5 | transcript | ENST00000323469.5 | protein_coding | 897 | chr19 | TogoVar | ||||||
DIRAS1_chr19_2709567_2726372 | 2713732 | TCCCATCC others(565): Show |
T | downstream_gene_variant | MODIFIER | HG00408.hp1 HG00423.hp1 HG00438.hp1 others(114): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0005a0001c0001t0007others(11): Show | a0001c0001t0001g0004a0001c0001t0001g0008a0001c0001t0001g0021others(23): Show | 117 | 412 | 0.2840 | -572 | c.*29 others(11): Show |
DIRAS1 | ENSG00000176490.5 | transcript | ENST00000323469.5 | protein_coding | 834 | chr19 | TogoVar | ||||||
DLGAP2_chr8_732628_1713476 | 1406175 | GTATTGAG others(565): Show |
G | intron_variant | MODIFIER | HG02647.hp2 | a0002 | a0002c0001 | a0002c0001t0002 | a0002c0001t0002g0013 | 1 | 40 | 0.0250 | -572 | c.107 others(19): Show |
DLGAP2 | ENSG00000198010.13 | transcript | ENST00000637795.2 | protein_coding | 3/14 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
GAL3ST2_chr2_241771822_241809287 | 241806950 | CCTTCCCT others(565): Show |
C | downstream_gene_variant | MODIFIER | HG02040.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0199 | 1 | 314 | 0.0032 | -572 | c.*27 others(11): Show |
GAL3ST2 | ENSG00000154252.12 | transcript | ENST00000192314.7 | protein_coding | 2664 | chr2 | TogoVar | ||||||
HNRNPR_chr1_23299688_23349284 | 23324300 | AGCTCACG others(565): Show |
A | intron_variant | MODIFIER | NA18969.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0030 | 1 | 354 | 0.0028 | -572 | c.499 others(16): Show |
HNRNPR | ENSG00000125944.22 | transcript | ENST00000302271.11 | protein_coding | 5/10 | chr1 | TogoVar | ||||||
LILRA6_chr19_54231590_54247790 | 54233207 | CCATGGGC others(565): Show |
C | downstream_gene_variant | MODIFIER | HG00280.hp2 HG00323.hp1 HG01074.hp1 others(59): Show |
a0001a0002a0003others(16): Show | a0001c0001a0002c0002a0002c0070others(19): Show | a0001c0001t0028a0001c0001t0032a0001c0001t0034others(34): Show | a0001c0001t0028g0067a0001c0001t0032g0082a0001c0001t0034g0059others(42): Show | 62 | 450 | 0.1378 | -572 | c.*51 others(11): Show |
LILRA6 | ENSG00000244482.11 | transcript | ENST00000396365.7 | protein_coding | 3382 | chr19 | TogoVar | ||||||
NEU4_chr2_241804193_241822413 | 241806923 | CCTCAGCC others(565): Show |
C | upstream_gene_variant | MODIFIER | NA19057.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0009 | 1 | 319 | 0.0031 | -572 | c.-23 others(11): Show |
NEU4 | ENSG00000204099.12 | transcript | ENST00000407683.6 | protein_coding | 2269 | chr2 | TogoVar | ||||||
NEU4_chr2_241804193_241822413 | 241806950 | CCTTCCCT others(565): Show |
C | upstream_gene_variant | MODIFIER | HG02040.hp1 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0002 | 1 | 319 | 0.0031 | -572 | c.-23 others(11): Show |
NEU4 | ENSG00000204099.12 | transcript | ENST00000407683.6 | protein_coding | 2242 | chr2 | TogoVar | ||||||
NEU4_chr2_241804193_241822413 | 241806995 | CCCCTCAG others(565): Show |
C | upstream_gene_variant | MODIFIER | NA19003.hp1 | a0002 | a0002c0008 | a0002c0008t0002 | a0002c0008t0002g0138 | 1 | 319 | 0.0031 | -572 | c.-22 others(11): Show |
NEU4 | ENSG00000204099.12 | transcript | ENST00000407683.6 | protein_coding | 2197 | chr2 | TogoVar | ||||||
PARVB_chr22_44019302_44177939 | 44114394 | ATTGTTAC others(565): Show |
A | intron_variant | MODIFIER | HG01256.hp2 HG01258.hp1 HG02074.hp1 others(15): Show |
a0001a0003 | a0001c0001a0001c0002a0003c0006others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(13): Show | a0001c0001t0001g0069a0001c0001t0001g0316a0001c0001t0002g0068others(15): Show | 18 | 332 | 0.0542 | -572 | c.274 others(17): Show |
PARVB | ENSG00000188677.15 | transcript | ENST00000338758.12 | protein_coding | 3/12 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | |||||
SMOC2_chr6_168436184_168672992 | 168560546 | GCCCTGAG others(565): Show |
G | intron_variant | MODIFIER | HG00280.hp1 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0086 | 1 | 180 | 0.0056 | -572 | c.637 others(19): Show |
SMOC2 | ENSG00000112562.20 | transcript | ENST00000356284.7 | protein_coding | 7/12 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
SMOC2_chr6_168436184_168672992 | 168560936 | ATTCTTGG others(565): Show |
A | intron_variant | MODIFIER | NA18944.hp2 NA19088.hp2 |
a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0019a0001c0002t0002g0020 | 2 | 180 | 0.0111 | -572 | c.637 others(19): Show |
SMOC2 | ENSG00000112562.20 | transcript | ENST00000356284.7 | protein_coding | 7/12 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | |||||
SNTG2_chr2_945849_1372613 | 1106846 | GAGTGGTC others(565): Show |
G | intron_variant | MODIFIER | HG00323.hp2 HG00735.hp2 HG01074.hp2 others(6): Show |
a0001a0002a0003others(3): Show | a0001c0001a0002c0003a0003c0008others(3): Show | a0001c0001t0001a0002c0003t0001a0003c0008t0001others(4): Show | a0001c0001t0001g0057a0002c0003t0001g0098a0002c0003t0001g0183others(6): Show | 9 | 190 | 0.0474 | -572 | c.325 others(17): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 4/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
SNTG2_chr2_945849_1372613 | 1107886 | TAGTGGAC others(565): Show |
T | intron_variant | MODIFIER | HG02970.hp2 | a0005 | a0005c0006 | a0005c0006t0001 | a0005c0006t0001g0082 | 1 | 190 | 0.0053 | -572 | c.325 others(18): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 4/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
SNTG2_chr2_945849_1372613 | 1108416 | GTGCTGTC others(565): Show |
G | intron_variant | MODIFIER | HG02738.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0035 | 1 | 190 | 0.0053 | -572 | c.325 others(19): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 4/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
TWIST2_chr2_238843085_238915534 | 238880217 | ATTAGTGT others(565): Show |
A | intron_variant | MODIFIER | HG00140.hp2 HG00438.hp2 HG00642.hp1 others(14): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003 | a0001c0001t0001g0085a0001c0001t0001g0127a0001c0001t0001g0133others(14): Show | 17 | 338 | 0.0503 | -572 | c.*36 others(19): Show |
TWIST2 | ENSG00000233608.5 | transcript | ENST00000612363.2 | protein_coding | 1/1 | INFO_REALIGN_3_PRIME | chr2 | TogoVar |