regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
CNTNAP4_chr16_76272401_76565757 | 76472025 | ACTATCAC others(558): Show |
A | intron_variant | MODIFIER | HG01081.hp2 HG02895.hp1 HG02897.hp2 others(1): Show |
a0001a0015 | a0001c0001a0001c0004a0015c0034 | a0001c0001t0015a0001c0004t0006a0015c0034t0006 | a0001c0001t0015g0099a0001c0001t0015g0272a0001c0004t0006g0225others(1): Show | 4 | 274 | 0.0146 | -565 | c.165 others(19): Show |
CNTNAP4 | ENSG00000152910.19 | transcript | ENST00000611870.5 | protein_coding | 10/23 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |||||
DDX51_chr12_132131594_132149319 | 132134897 | CCCGAGTG others(558): Show |
C | downstream_gene_variant | MODIFIER | HG03579.hp2 NA19007.hp1 |
a0002a0004 | a0002c0002a0004c0004 | a0002c0002t0020a0004c0004t0006 | a0002c0002t0020g0029a0004c0004t0006g0081 | 2 | 334 | 0.0060 | -565 | c.*38 others(11): Show |
DDX51 | ENSG00000185163.10 | transcript | ENST00000397333.4 | protein_coding | 1696 | chr12 | TogoVar | ||||||
PDS5B_chr13_32581452_32783019 | 32596635 | TTACATCC others(558): Show |
T | intron_variant | MODIFIER | NA19240.hp2 | a0001 | a0001c0001 | a0001c0001t0012 | a0001c0001t0012g0287 | 1 | 334 | 0.0030 | -565 | c.-20 others(19): Show |
PDS5B | ENSG00000083642.19 | transcript | ENST00000315596.15 | protein_coding | 1/34 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
SNTG2_chr2_945849_1372613 | 1343615 | CCCCTGTT others(558): Show |
C | intron_variant | MODIFIER | HG02071.hp2 HG02165.hp1 |
a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0029a0001c0002t0001g0126 | 2 | 190 | 0.0105 | -565 | c.148 others(21): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 16/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
SNTG2_chr2_945849_1372613 | 1343728 | CCCCTGTT others(558): Show |
C | intron_variant | MODIFIER | HG02630.hp1 HG03209.hp1 |
a0004 | a0004c0004 | a0004c0004t0001 | a0004c0004t0001g0180a0004c0004t0001g0181 | 2 | 190 | 0.0105 | -565 | c.148 others(21): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 16/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
SNTG2_chr2_945849_1372613 | 1343954 | CCCCTGTT others(558): Show |
C | intron_variant | MODIFIER | HG00735.hp1 HG01257.hp2 HG03710.hp1 |
a0003 | a0003c0007a0003c0008 | a0003c0007t0001a0003c0008t0001 | a0003c0007t0001g0080a0003c0008t0001g0060a0003c0008t0001g0095 | 3 | 190 | 0.0158 | -565 | c.148 others(21): Show |
SNTG2 | ENSG00000172554.12 | transcript | ENST00000308624.10 | protein_coding | 16/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
TUBGCP2_chr10_133273635_133313872 | 133291220 | AGAGAGGG others(558): Show |
A | intron_variant | MODIFIER | HG03225.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0240 | 1 | 284 | 0.0035 | -565 | c.121 others(18): Show |
TUBGCP2 | ENSG00000130640.15 | transcript | ENST00000252936.8 | protein_coding | 8/17 | chr10 | TogoVar | ||||||
ARRDC5_chr19_4885437_4907896 | 4885592 | CTCGGGAG others(557): Show |
C | downstream_gene_variant | MODIFIER | HG03491.hp1 HG03492.hp1 NA18939.hp2 others(5): Show |
a0001a0006 | a0001c0001a0006c0009 | a0001c0001t0001a0006c0009t0001 | a0001c0001t0001g0221a0001c0001t0001g0222a0001c0001t0001g0239others(5): Show | 8 | 412 | 0.0194 | -564 | c.*48 others(11): Show |
ARRDC5 | ENSG00000205784.4 | transcript | ENST00000650722.2 | protein_coding | 4844 | chr19 | TogoVar | ||||||
BRSK2_chr11_1384934_1467689 | 1430118 | GTCTGGTC others(557): Show |
G | intron_variant | MODIFIER | NA18990.hp2 | a0002 | a0002c0002 | a0002c0002t0007 | a0002c0002t0007g0306 | 1 | 360 | 0.0028 | -564 | c.92- others(15): Show |
BRSK2 | ENSG00000174672.16 | transcript | ENST00000528841.6 | protein_coding | 1/19 | chr11 | TogoVar | ||||||
BRSK2_chr11_1384934_1467689 | 1430165 | GTCTGGTC others(557): Show |
G | intron_variant | MODIFIER | HG00323.hp1 HG01109.hp1 |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0006a0002c0002t0005 | a0001c0001t0006g0214a0002c0002t0005g0216 | 2 | 360 | 0.0056 | -564 | c.92- others(15): Show |
BRSK2 | ENSG00000174672.16 | transcript | ENST00000528841.6 | protein_coding | 1/19 | chr11 | TogoVar | ||||||
CAMK1D_chr10_12344547_12840545 | 12775556 | AGGTGAGA others(557): Show |
A | intron_variant | MODIFIER | HG01168.hp2 HG01928.hp1 NA18948.hp2 others(3): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0001t0036a0001c0002t0004others(2): Show | a0001c0001t0001g0016a0001c0001t0001g0176a0001c0001t0036g0125others(3): Show | 6 | 214 | 0.0280 | -564 | c.565 others(17): Show |
CAMK1D | ENSG00000183049.14 | transcript | ENST00000619168.5 | protein_coding | 5/10 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |||||
CCNY_chr10_35331509_35577667 | 35370386 | TGTGATCC others(557): Show |
T | intron_variant | MODIFIER | HG02559.hp1 HG02723.hp2 HG02818.hp1 others(5): Show |
a0001a0003 | a0001c0001a0003c0004 | a0001c0001t0008a0001c0001t0009a0003c0004t0009 | a0001c0001t0008g0138a0001c0001t0008g0139a0001c0001t0008g0140others(5): Show | 8 | 296 | 0.0270 | -564 | c.154 others(19): Show |
CCNY | ENSG00000108100.18 | transcript | ENST00000374704.8 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |||||
DPH7_chr9_137549444_137583925 | 137567394 | TGGGTGAC others(557): Show |
T | intron_variant | MODIFIER | HG00280.hp2 HG00323.hp2 HG00438.hp1 others(23): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0005 | a0001c0001t0002g0019a0001c0001t0002g0141a0001c0001t0002g0251others(22): Show | 26 | 340 | 0.0765 | -564 | c.641 others(17): Show |
DPH7 | ENSG00000148399.13 | transcript | ENST00000277540.7 | protein_coding | 5/8 | chr9 | TogoVar | ||||||
FOXN3_chr14_89151177_89422233 | 89362210 | GCACCACC others(557): Show |
G | intron_variant | MODIFIER | NA19240.hp1 | a0001 | a0001c0001 | a0001c0001t0051 | a0001c0001t0051g0165 | 1 | 230 | 0.0044 | -564 | c.544 others(19): Show |
FOXN3 | ENSG00000053254.16 | transcript | ENST00000557258.6 | protein_coding | 2/5 | chr14 | TogoVar | ||||||
GRTP1_chr13_113319163_113369130 | 113346254 | GAGAGCAG others(557): Show |
G | intron_variant | MODIFIER | HG02451.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0023 | 1 | 288 | 0.0035 | -564 | c.466 others(17): Show |
GRTP1 | ENSG00000139835.14 | transcript | ENST00000375431.9 | protein_coding | 4/7 | chr13 | TogoVar | ||||||
GRTP1_chr13_113319163_113369130 | 113346501 | CGGGAGGA others(557): Show |
C | intron_variant | MODIFIER | NA18963.hp2 NA18995.hp1 NA19064.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002a0001c0001t0001g0192a0001c0001t0001g0224others(1): Show | 5 | 288 | 0.0174 | -564 | c.466 others(17): Show |
GRTP1 | ENSG00000139835.14 | transcript | ENST00000375431.9 | protein_coding | 4/7 | chr13 | TogoVar | ||||||
GRTP1_chr13_113319163_113369130 | 113347200 | GGCCGAGA others(557): Show |
G | intron_variant | MODIFIER | HG02630.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0022 | 1 | 288 | 0.0035 | -564 | c.466 others(17): Show |
GRTP1 | ENSG00000139835.14 | transcript | ENST00000375431.9 | protein_coding | 4/7 | chr13 | TogoVar | ||||||
KNDC1_chr10_133155219_133231412 | 133222580 | TGTGTGTG others(557): Show |
T | intron_variant | MODIFIER | HG00323.hp1 HG00423.hp1 HG00438.hp2 others(128): Show |
a0001a0002a0004others(12): Show | a0001c0001a0001c0068a0002c0002others(27): Show | a0001c0001t0002a0001c0068t0002a0002c0002t0002others(34): Show | a0001c0001t0002g0081a0001c0001t0002g0193a0001c0001t0002g0205others(126): Show | 131 | 332 | 0.3946 | -564 | c.501 others(19): Show |
KNDC1 | ENSG00000171798.19 | transcript | ENST00000304613.8 | protein_coding | 29/29 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |||||
KNDC1_chr10_133155219_133231412 | 133222622 | TGTGTCTG others(557): Show |
T | intron_variant | MODIFIER | HG01243.hp1 HG03516.hp2 HG06807.hp2 |
a0003a0022 | a0003c0015a0003c0032a0022c0030 | a0003c0015t0002a0003c0032t0010a0022c0030t0010 | a0003c0015t0002g0237a0003c0032t0010g0308a0022c0030t0010g0309 | 3 | 332 | 0.0090 | -564 | c.501 others(19): Show |
KNDC1 | ENSG00000171798.19 | transcript | ENST00000304613.8 | protein_coding | 29/29 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |||||
LPP_chr3_188149157_188895671 | 188784927 | TATATATA others(557): Show |
T | intron_variant | MODIFIER | HG01081.hp1 | a0001 | a0001c0006 | a0001c0006t0032 | a0001c0006t0032g0005 | 1 | 76 | 0.0132 | -564 | c.141 others(21): Show |
LPP | ENSG00000145012.15 | transcript | ENST00000617246.5 | protein_coding | 9/11 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
NOC4L_chr12_132139457_132157468 | 132149576 | CACACCAC others(557): Show |
C | intron_variant | MODIFIER | HG02965.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0008 | 1 | 294 | 0.0034 | -564 | c.901 others(15): Show |
NOC4L | ENSG00000184967.7 | transcript | ENST00000330579.6 | protein_coding | 9/14 | chr12 | TogoVar | ||||||
PDS5B_chr13_32581452_32783019 | 32596636 | TACATCCT others(557): Show |
T | intron_variant | MODIFIER | HG02717.hp2 HG03225.hp1 NA20129.hp1 |
a0001 | a0001c0001 | a0001c0001t0012 | a0001c0001t0012g0288a0001c0001t0012g0289a0001c0001t0012g0290 | 3 | 334 | 0.0090 | -564 | c.-20 others(19): Show |
PDS5B | ENSG00000083642.19 | transcript | ENST00000315596.15 | protein_coding | 1/34 | chr13 | TogoVar | ||||||
SHC2_chr19_411589_466033 | 431432 | CGGGCAGA others(557): Show |
C | intron_variant | MODIFIER | HG02486.hp1 | a0001 | a0001c0001 | a0001c0001t0011 | a0001c0001t0011g0038 | 1 | 212 | 0.0047 | -564 | c.111 others(18): Show |
SHC2 | ENSG00000129946.11 | transcript | ENST00000264554.11 | protein_coding | 8/12 | chr19 | TogoVar | ||||||
CLEC1B_chr12_9988075_10004121 | 10002011 | CTGGGAGT others(556): Show |
C | upstream_gene_variant | MODIFIER | NA19058.hp2 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0004 | 1 | 462 | 0.0022 | -563 | c.-34 others(11): Show |
CLEC1B | ENSG00000165682.15 | transcript | ENST00000298527.11 | protein_coding | 2891 | chr12 | TogoVar | ||||||
SLC17A9_chr20_62947709_62974585 | 62971564 | TTGAGTTG others(556): Show |
T | downstream_gene_variant | MODIFIER | NA18940.hp1 NA18969.hp1 NA19054.hp2 others(2): Show |
a0001 | a0001c0003 | a0001c0003t0001 | a0001c0003t0001g0018a0001c0003t0001g0190 | 5 | 432 | 0.0116 | -563 | c.*40 others(11): Show |
SLC17A9 | ENSG00000101194.18 | transcript | ENST00000370351.9 | protein_coding | 1980 | chr20 | TogoVar | ||||||
C7orf50_chr7_992006_1143247 | 1128591 | CCACCGTC others(555): Show |
C | intron_variant | MODIFIER | HG02258.hp1 HG03209.hp2 HG06807.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0007a0001c0001t0008 | a0001c0001t0005g0294a0001c0001t0005g0295a0001c0001t0007g0150others(1): Show | 4 | 326 | 0.0123 | -562 | c.-1- others(15): Show |
C7orf50 | ENSG00000146540.15 | transcript | ENST00000397098.8 | protein_coding | 1/4 | chr7 | TogoVar | ||||||
C7orf50_chr7_992006_1143247 | 1128623 | CATCTCGG others(555): Show |
C | intron_variant | MODIFIER | HG02027.hp2 HG02132.hp2 NA18945.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0069a0001c0001t0001g0070a0001c0001t0001g0072others(1): Show | 4 | 326 | 0.0123 | -562 | c.-1- others(15): Show |
C7orf50 | ENSG00000146540.15 | transcript | ENST00000397098.8 | protein_coding | 1/4 | chr7 | TogoVar | ||||||
C7orf50_chr7_992006_1143247 | 1128683 | CCACCGTC others(555): Show |
C | intron_variant | MODIFIER | HG02723.hp2 | a0002 | a0002c0002 | a0002c0002t0003 | a0002c0002t0003g0301 | 1 | 326 | 0.0031 | -562 | c.-1- others(15): Show |
C7orf50 | ENSG00000146540.15 | transcript | ENST00000397098.8 | protein_coding | 1/4 | chr7 | TogoVar | ||||||
CNN2_chr19_1021608_1044065 | 1033758 | GACGGTGT others(555): Show |
G | intron_variant | MODIFIER | HG03688.hp1 | a0001 | a0001c0011 | a0001c0011t0004 | a0001c0011t0004g0156 | 1 | 390 | 0.0026 | -562 | c.390 others(17): Show |
CNN2 | ENSG00000064666.15 | transcript | ENST00000263097.9 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | |||||
DHX36_chr3_154267546_154329487 | 154288183 | AAAAACCA others(555): Show |
A | intron_variant | MODIFIER | NA19002.hp2 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0305 | 1 | 366 | 0.0027 | -562 | c.203 others(17): Show |
DHX36 | ENSG00000174953.14 | transcript | ENST00000496811.6 | protein_coding | 17/24 | chr3 | TogoVar | ||||||
ERC1_chr12_986223_1500931 | 1121947 | ATCTCTAT others(555): Show |
A | intron_variant | MODIFIER | HG01243.hp1 HG02258.hp1 HG03225.hp2 |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0004a0002c0002t0052a0002c0002t0100 | a0001c0001t0004g0078a0002c0002t0052g0154a0002c0002t0100g0134 | 3 | 162 | 0.0185 | -562 | c.156 others(19): Show |
ERC1 | ENSG00000082805.21 | transcript | ENST00000360905.9 | protein_coding | 7/18 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
KNDC1_chr10_133155219_133231412 | 133222582 | TGTGTGTG others(555): Show |
T | intron_variant | MODIFIER | HG02698.hp1 | a0017 | a0017c0057 | a0017c0057t0002 | a0017c0057t0002g0074 | 1 | 332 | 0.0030 | -562 | c.501 others(19): Show |
KNDC1 | ENSG00000171798.19 | transcript | ENST00000304613.8 | protein_coding | 29/29 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |||||
OTOGL_chr12_80094537_80385880 | 80286990 | TAGATCAT others(555): Show |
T | intron_variant | MODIFIER | HG02717.hp2 | a0007 | a0007c0031 | a0007c0031t0015 | a0007c0031t0015g0163 | 1 | 168 | 0.0060 | -562 | c.292 others(19): Show |
OTOGL | ENSG00000165899.12 | transcript | ENST00000547103.7 | protein_coding | 26/58 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
ZNF512B_chr20_63951704_63974930 | 63964914 | CACCACTG others(555): Show |
C | intron_variant | MODIFIER | HG01099.hp1 HG01167.hp1 HG01169.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0021 | 3 | 356 | 0.0084 | -562 | c.103 others(17): Show |
ZNF512B | ENSG00000196700.9 | transcript | ENST00000369888.6 | protein_coding | 5/16 | chr20 | TogoVar | ||||||
ARHGAP39_chr8_144524179_144690846 | 144624682 | TCACTGCA others(554): Show |
T | intron_variant | MODIFIER | HG02683.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0184 | 1 | 246 | 0.0041 | -561 | c.-81 others(19): Show |
ARHGAP39 | ENSG00000147799.12 | transcript | ENST00000377307.7 | protein_coding | 1/11 | chr8 | TogoVar | ||||||
CFAP46_chr10_132803392_132947570 | 132914022 | CCCCCGCC others(554): Show |
C | intron_variant | MODIFIER | HG01346.hp2 HG04228.hp2 NA18939.hp2 others(1): Show |
a0001a0003a0007 | a0001c0096a0003c0012a0007c0008others(1): Show | a0001c0096t0002a0003c0012t0002a0007c0008t0002others(1): Show | a0001c0096t0002g0035a0003c0012t0002g0055a0007c0008t0002g0075others(1): Show | 4 | 246 | 0.0163 | -561 | c.212 others(18): Show |
CFAP46 | ENSG00000171811.14 | transcript | ENST00000368586.10 | protein_coding | 17/57 | chr10 | TogoVar | ||||||
CFAP46_chr10_132803392_132947570 | 132914127 | CCCCGAGG others(554): Show |
C | intron_variant | MODIFIER | NA20300.hp2 | a0017 | a0017c0026 | a0017c0026t0002 | a0017c0026t0002g0097 | 1 | 246 | 0.0041 | -561 | c.212 others(18): Show |
CFAP46 | ENSG00000171811.14 | transcript | ENST00000368586.10 | protein_coding | 17/57 | chr10 | TogoVar | ||||||
DIP2C_chr10_269201_694668 | 345889 | TCACCCAA others(554): Show |
T | intron_variant | MODIFIER | HG02647.hp2 HG03130.hp1 |
a0001 | a0001c0004a0001c0018 | a0001c0004t0003a0001c0018t0003 | a0001c0004t0003g0078a0001c0018t0003g0011 | 2 | 88 | 0.0227 | -561 | c.323 others(18): Show |
DIP2C | ENSG00000151240.18 | transcript | ENST00000280886.12 | protein_coding | 26/36 | chr10 | TogoVar | ||||||
INPP5A_chr10_132532787_132788480 | 132717273 | GCTGGCCC others(554): Show |
G | intron_variant | MODIFIER | HG01261.hp1 HG02109.hp1 HG02145.hp1 others(6): Show |
a0001 | a0001c0005a0001c0006a0001c0007 | a0001c0005t0001a0001c0005t0002a0001c0005t0018others(4): Show | a0001c0005t0001g0185a0001c0005t0001g0186a0001c0005t0002g0039others(6): Show | 9 | 204 | 0.0441 | -561 | c.647 others(17): Show |
INPP5A | ENSG00000068383.19 | transcript | ENST00000368594.8 | protein_coding | 8/15 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | |||||
KCNG2_chr18_79792938_79905100 | 79885890 | GGGGACAC others(554): Show |
G | intron_variant | MODIFIER | HG02109.hp2 HG02559.hp1 HG02572.hp2 others(5): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0002c0002t0001 | a0001c0001t0001g0139a0001c0001t0001g0157a0001c0001t0001g0177others(5): Show | 8 | 312 | 0.0256 | -561 | c.625 others(19): Show |
KCNG2 | ENSG00000178342.5 | transcript | ENST00000316249.4 | protein_coding | 3/3 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | |||||
LUC7L_chr16_183990_234449 | 186034 | AGGAATAC others(554): Show |
A | downstream_gene_variant | MODIFIER | HG01993.hp1 HG02071.hp2 HG03927.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0189a0001c0001t0001g0219a0001c0001t0001g0244 | 3 | 350 | 0.0086 | -561 | c.*26 others(11): Show |
LUC7L | ENSG00000007392.17 | transcript | ENST00000293872.13 | protein_coding | 2955 | chr16 | TogoVar | ||||||
MYOM2_chr8_2040046_2150456 | 2085560 | CTGCGTGG others(554): Show |
C | intron_variant | MODIFIER | HG00735.hp1 NA19005.hp1 |
a0007a0068 | a0007c0100a0068c0082 | a0007c0100t0001a0068c0082t0001 | a0007c0100t0001g0337a0068c0082t0001g0260 | 2 | 403 | 0.0050 | -561 | c.164 others(17): Show |
MYOM2 | ENSG00000036448.10 | transcript | ENST00000262113.9 | protein_coding | 14/36 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | |||||
PRKCA_chr17_66297613_66815743 | 66798617 | GTGGTGGT others(554): Show |
G | intron_variant | MODIFIER | HG02056.hp1 | a0001 | a0001c0001 | a0001c0001t0070 | a0001c0001t0070g0063 | 1 | 178 | 0.0056 | -561 | c.185 others(19): Show |
PRKCA | ENSG00000154229.12 | transcript | ENST00000413366.8 | protein_coding | 16/16 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
SMOC2_chr6_168436184_168672992 | 168593701 | GGGCATCT others(554): Show |
G | intron_variant | MODIFIER | HG00280.hp2 HG00423.hp1 HG00423.hp2 others(17): Show |
a0001a0004 | a0001c0001a0001c0002a0004c0009 | a0001c0001t0001a0001c0001t0003a0001c0002t0002others(1): Show | a0001c0001t0001g0098a0001c0001t0001g0103a0001c0001t0001g0132others(17): Show | 20 | 180 | 0.1111 | -561 | c.638 others(17): Show |
SMOC2 | ENSG00000112562.20 | transcript | ENST00000356284.7 | protein_coding | 7/12 | chr6 | TogoVar | ||||||
TMEM239_chr20_2811364_2823062 | 2822501 | TAAAAGAA others(554): Show |
T | downstream_gene_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00140.hp2 others(316): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0003a0002c0002others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(16): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0012others(33): Show | 319 | 400 | 0.7975 | -561 | c.*54 others(11): Show |
TMEM239 | ENSG00000198326.10 | transcript | ENST00000380585.2 | protein_coding | 4440 | chr20 | TogoVar | ||||||
TUBGCP5_chr15_22994177_23044569 | 23043122 | CTGCCAGA others(554): Show |
C | upstream_gene_variant | MODIFIER | NA18982.hp1 NA18992.hp2 NA19076.hp1 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0002 | a0001c0001t0001g0010a0001c0002t0002g0096a0001c0002t0002g0252 | 3 | 351 | 0.0086 | -561 | c.-41 others(11): Show |
TUBGCP5 | ENSG00000275835.5 | transcript | ENST00000615383.5 | protein_coding | 3554 | chr15 | TogoVar | ||||||
USP49_chr6_41784896_41900375 | 41897032 | GCCTGTAA others(554): Show |
G | upstream_gene_variant | MODIFIER | HG00280.hp2 HG00323.hp1 HG00408.hp2 others(55): Show |
a0001a0002a0005 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0001a0001c0001t0015a0001c0002t0012others(6): Show | a0001c0001t0001g0221a0001c0001t0015g0063a0001c0001t0015g0219others(55): Show | 58 | 384 | 0.1510 | -561 | c.-24 others(11): Show |
USP49 | ENSG00000164663.15 | transcript | ENST00000682992.1 | protein_coding | 1658 | chr6 | TogoVar | ||||||
WRAP73_chr1_3625770_3655103 | 3643812 | CGGCCCCG others(554): Show |
C | intron_variant | MODIFIER | HG00642.hp2 HG01257.hp1 HG01258.hp1 others(6): Show |
a0002 | a0002c0004 | a0002c0004t0001 | a0002c0004t0001g0007a0002c0004t0001g0032 | 9 | 382 | 0.0236 | -561 | c.339 others(17): Show |
WRAP73 | ENSG00000116213.16 | transcript | ENST00000270708.12 | protein_coding | 3/11 | chr1 | TogoVar | ||||||
WRAP73_chr1_3625770_3655103 | 3643860 | CAGCGGCC others(554): Show |
C | intron_variant | MODIFIER | HG03130.hp2 | a0003 | a0003c0005 | a0003c0005t0001 | a0003c0005t0001g0056 | 1 | 382 | 0.0026 | -561 | c.339 others(17): Show |
WRAP73 | ENSG00000116213.16 | transcript | ENST00000270708.12 | protein_coding | 3/11 | chr1 | TogoVar | ||||||
ZNF516_chr18_76352682_76500242 | 76392926 | GGGGGGAG others(554): Show |
G | intron_variant | MODIFIER | NA19090.hp2 | a0001 | a0001c0001 | a0001c0001t0023 | a0001c0001t0023g0097 | 1 | 346 | 0.0029 | -561 | c.181 others(21): Show |
ZNF516 | ENSG00000101493.11 | transcript | ENST00000443185.7 | protein_coding | 3/6 | chr18 | TogoVar |