view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
LBP_chr20_38341482_38382013 | 38379954 | AGTGATAG others(2052): Show |
A | downstream_gene_variant | MODIFIER | HG02486.hp2 HG03710.hp2 |
a0001a0005 | a0001c0001a0005c0006 | a0001c0001t0001a0005c0006t0001 | a0001c0001t0001g0316a0005c0006t0001g0058 | 2 | 394 | 0.0051 | -2059 | c.*32 others(11): Show |
LBP | ENSG00000129988.6 | transcript | ENST00000217407.3 | protein_coding | 2942 | chr20 | TogoVar | |||||||
NEU4_chr2_241804193_241822413 | 241805711 | CTCCCCCC others(2052): Show |
C | upstream_gene_variant | MODIFIER | HG00438.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0003 | 1 | 319 | 0.0031 | -2059 | c.-35 others(11): Show |
NEU4 | ENSG00000204099.12 | transcript | ENST00000407683.6 | protein_coding | 3481 | chr2 | TogoVar | |||||||
PHF20_chr20_35767015_35955370 | 35803365 | TCAGGCTG others(2052): Show |
T | intron_variant | MODIFIER | HG03688.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0003 | 1 | 206 | 0.0049 | -2059 | c.83+ others(15): Show |
PHF20 | ENSG00000025293.17 | transcript | ENST00000374012.8 | protein_coding | 2/17 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
ADPRHL1_chr13_113394611_113458488 | 113435015 | GGCACCCA others(2051): Show |
G | intron_variant | MODIFIER | HG02572.hp2 HG03130.hp1 HG03471.hp2 |
a0001a0004 | a0001c0065a0004c0019 | a0001c0065t0016a0004c0019t0097a0004c0019t0098 | a0001c0065t0016g0079a0004c0019t0097g0055a0004c0019t0098g0112 | 3 | 262 | 0.0115 | -2058 | c.380 others(17): Show |
ADPRHL1 | ENSG00000153531.15 | transcript | ENST00000612156.3 | protein_coding | 2/7 | chr13 | TogoVar | |||||||
ASMT_chrX_1610059_1648081 | 1637215 | ACATGAGG others(2049): Show |
A | intron_variant | MODIFIER | HG01516.hp2 NA18973.hp1 |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0002c0002t0002 | a0001c0001t0001g0041a0002c0002t0002g0199 | 2 | 223 | 0.0090 | -2056 | c.910 others(16): Show |
ASMT | ENSG00000196433.13 | transcript | ENST00000381241.9 | protein_coding | 8/8 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
CPEB1_chr15_82538201_82652363 | 82621350 | AGTGGCTC others(2049): Show |
A | intron_variant | MODIFIER | HG02132.hp1 | a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0331 | 1 | 354 | 0.0028 | -2056 | c.271 others(17): Show |
CPEB1 | ENSG00000214575.10 | transcript | ENST00000684509.1 | protein_coding | 3/12 | chr15 | TogoVar | |||||||
PRKCZ_chr1_2045411_2190395 | 2121830 | GTGGTAGT others(2047): Show |
G | intron_variant | MODIFIER | NA19002.hp2 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0099 | 1 | 286 | 0.0035 | -2054 | c.335 others(19): Show |
PRKCZ | ENSG00000067606.17 | transcript | ENST00000378567.8 | protein_coding | 4/17 | chr1 | TogoVar | |||||||
SLC25A33_chr1_9534465_9590173 | 9535553 | ATGCCACT others(2047): Show |
A | upstream_gene_variant | MODIFIER | HG00280.hp2 HG00323.hp2 HG00423.hp2 others(110): Show |
a0001 | a0001c0001a0001c0003a0001c0008 | a0001c0001t0002a0001c0001t0005a0001c0001t0007others(14): Show | a0001c0001t0002g0212a0001c0001t0002g0213a0001c0001t0002g0214others(110): Show | 113 | 362 | 0.3122 | -2054 | c.-41 others(11): Show |
SLC25A33 | ENSG00000171612.7 | transcript | ENST00000302692.7 | protein_coding | 3911 | chr1 | TogoVar | |||||||
TMTC1_chr12_29495840_29788942 | 29691448 | AAACTGGT others(2047): Show |
A | intron_variant | MODIFIER | HG00140.hp1 HG00423.hp2 HG00438.hp1 others(76): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0005others(11): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(54): Show | a0001c0001t0001g0155a0001c0001t0001g0181a0001c0001t0002g0089others(76): Show | 79 | 276 | 0.2862 | -2054 | c.938 others(19): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 5/17 | chr12 | TogoVar | |||||||
GAL3ST2_chr2_241771822_241809287 | 241805556 | ACCCTCCC others(2044): Show |
A | downstream_gene_variant | MODIFIER | HG02080.hp1 | a0003 | a0003c0003 | a0003c0003t0001 | a0003c0003t0001g0007 | 1 | 314 | 0.0032 | -2051 | c.*13 others(11): Show |
GAL3ST2 | ENSG00000154252.12 | transcript | ENST00000192314.7 | protein_coding | 1270 | chr2 | TogoVar | |||||||
NEU4_chr2_241804193_241822413 | 241805556 | ACCCTCCC others(2044): Show |
A | upstream_gene_variant | MODIFIER | HG02080.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0137 | 1 | 319 | 0.0031 | -2051 | c.-37 others(11): Show |
NEU4 | ENSG00000204099.12 | transcript | ENST00000407683.6 | protein_coding | 3636 | chr2 | TogoVar | |||||||
SCN3A_chr2_165082526_165209050 | 165158183 | GTGGTTTC others(2044): Show |
G | intron_variant | MODIFIER | HG00140.hp1 HG00438.hp1 HG00544.hp2 others(98): Show |
a0001a0002a0006others(2): Show | a0001c0001a0001c0002a0001c0003others(14): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(29): Show | a0001c0001t0001g0064a0001c0001t0001g0065a0001c0001t0001g0070others(97): Show | 101 | 314 | 0.3217 | -2051 | c.103 others(19): Show |
SCN3A | ENSG00000153253.20 | transcript | ENST00000283254.12 | protein_coding | 9/27 | chr2 | TogoVar | |||||||
PCGF3_chr4_700832_775089 | 744955 | TCCGTGGA others(2042): Show |
T | intron_variant | MODIFIER | HG02135.hp1 | a0001 | a0001c0003 | a0001c0003t0010 | a0001c0003t0010g0128 | 1 | 366 | 0.0027 | -2049 | c.462 others(16): Show |
PCGF3 | ENSG00000185619.19 | transcript | ENST00000362003.10 | protein_coding | 8/10 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
ADGRV1_chr5_90553797_91169437 | 90686000 | GAAAAGAC others(2041): Show |
G | intron_variant | MODIFIER | HG01891.hp1 HG03041.hp1 |
a0054a0055 | a0054c0057a0055c0058 | a0054c0057t0001a0055c0058t0003 | a0054c0057t0001g0145a0055c0058t0003g0060 | 2 | 158 | 0.0127 | -2048 | c.649 others(16): Show |
ADGRV1 | ENSG00000164199.18 | transcript | ENST00000405460.9 | protein_coding | 29/89 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
PCGF3_chr4_700832_775089 | 744984 | CCCGGGGG others(2041): Show |
C | intron_variant | MODIFIER | HG02698.hp2 | a0001 | a0001c0001 | a0001c0001t0008 | a0001c0001t0008g0281 | 1 | 366 | 0.0027 | -2048 | c.462 others(16): Show |
PCGF3 | ENSG00000185619.19 | transcript | ENST00000362003.10 | protein_coding | 8/10 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
RETREG2_chr2_219173275_219190475 | 219188430 | AAAAAAAA others(2038): Show |
A | downstream_gene_variant | MODIFIER | HG02965.hp1 NA19006.hp1 |
a0002 | a0002c0001 | a0002c0001t0001a0002c0001t0046 | a0002c0001t0001g0002a0002c0001t0046g0002 | 2 | 430 | 0.0047 | -2045 | c.*58 others(11): Show |
RETREG2 | ENSG00000144567.11 | transcript | ENST00000430297.7 | protein_coding | 2956 | chr2 | TogoVar | |||||||
CCDC92B_chr17_2715801_2754652 | 2735440 | CTTTTTTT others(2037): Show |
C | intron_variant | MODIFIER | HG02683.hp1 | a0002 | a0002c0002 | a0002c0002t0002 | a0002c0002t0002g0341 | 1 | 418 | 0.0024 | -2044 | c.-23 others(16): Show |
CCDC92B | ENSG00000277200.2 | transcript | ENST00000614400.2 | protein_coding | 1/3 | chr17 | TogoVar | |||||||
MAGEA4_chrX_151907889_151930170 | 151913961 | CCGCCATC others(2037): Show |
C | intron_variant | MODIFIER | HG02735.hp1 HG03239.hp1 HG03491.hp2 others(1): Show |
a0002 | a0002c0001 | a0002c0001t0002 | a0002c0001t0002g0010 | 4 | 344 | 0.0116 | -2044 | c.-13 others(19): Show |
MAGEA4 | ENSG00000147381.12 | transcript | ENST00000276344.6 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
MAGEA4_chrX_151907889_151930170 | 151913994 | CTACCAAC others(2037): Show |
C | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(151): Show |
a0001a0002a0003others(4): Show | a0001c0002a0001c0003a0001c0004others(10): Show | a0001c0002t0002a0001c0002t0003a0001c0002t0004others(17): Show | a0001c0002t0002g0001a0001c0002t0002g0036a0001c0002t0002g0038others(60): Show | 154 | 344 | 0.4477 | -2044 | c.-13 others(19): Show |
MAGEA4 | ENSG00000147381.12 | transcript | ENST00000276344.6 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
MAGEA4_chrX_151907889_151930170 | 151915682 | CGACCCCA others(2037): Show |
C | intron_variant | MODIFIER | HG00323.hp1 HG00408.hp2 HG00423.hp1 others(166): Show |
a0001a0002a0008others(2): Show | a0001c0002a0001c0004a0001c0009others(6): Show | a0001c0002t0001a0001c0002t0003a0001c0004t0001others(9): Show | a0001c0002t0001g0002a0001c0002t0001g0003a0001c0002t0001g0011others(60): Show | 169 | 344 | 0.4913 | -2044 | c.-13 others(19): Show |
MAGEA4 | ENSG00000147381.12 | transcript | ENST00000276344.6 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
RETREG2_chr2_219173275_219190475 | 219188431 | AAAAAAAA others(2037): Show |
A | downstream_gene_variant | MODIFIER | HG00099.hp2 HG00280.hp1 HG00280.hp2 others(127): Show |
a0001a0002a0005 | a0001c0002a0002c0001a0005c0007 | a0001c0002t0038a0001c0002t0039a0002c0001t0001others(14): Show | a0001c0002t0038g0001a0001c0002t0039g0001a0002c0001t0001g0001others(22): Show | 130 | 430 | 0.3023 | -2044 | c.*58 others(11): Show |
RETREG2 | ENSG00000144567.11 | transcript | ENST00000430297.7 | protein_coding | 2957 | chr2 | TogoVar | |||||||
RETREG2_chr2_219173275_219190475 | 219188432 | AAAAAAAA others(2036): Show |
A | downstream_gene_variant | MODIFIER | HG00558.hp2 HG01168.hp1 HG01192.hp1 others(6): Show |
a0002a0009 | a0002c0001a0009c0016 | a0002c0001t0001a0002c0001t0005a0009c0016t0005 | a0002c0001t0001g0002a0002c0001t0005g0002a0002c0001t0005g0010others(1): Show | 9 | 430 | 0.0209 | -2043 | c.*58 others(11): Show |
RETREG2 | ENSG00000144567.11 | transcript | ENST00000430297.7 | protein_coding | 2958 | chr2 | TogoVar | |||||||
MAGEA4_chrX_151907889_151930170 | 151914676 | CCCTCCAC others(2035): Show |
C | intron_variant | MODIFIER | NA18991.hp2 | a0002 | a0002c0001 | a0002c0001t0002 | a0002c0001t0002g0127 | 1 | 344 | 0.0029 | -2042 | c.-13 others(19): Show |
MAGEA4 | ENSG00000147381.12 | transcript | ENST00000276344.6 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
FAM149A_chr4_186099704_186180337 | 186173694 | CAGCAGCA others(2034): Show |
C | splice_region_variant | LOW | NA19062.hp1 | a0006 | a0006c0023 | a0006c0023t0080 | a0006c0023t0080g0127 | 1 | 390 | 0.0026 | -2041 | c.*17 others(11): Show |
FAM149A | ENSG00000109794.14 | transcript | ENST00000706927.1 | protein_coding | 14/14 | chr4 | TogoVar | |||||||
SMYD3_chr1_245744347_246512279 | 245974745 | GGCCCAGG others(2033): Show |
G | intron_variant | MODIFIER | NA18965.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0071 | 1 | 150 | 0.0067 | -2040 | c.532 others(19): Show |
SMYD3 | ENSG00000185420.19 | transcript | ENST00000490107.6 | protein_coding | 5/11 | chr1 | TogoVar | |||||||
MAGEA4_chrX_151907889_151930170 | 151914810 | TCCGCTTC others(2032): Show |
T | intron_variant | MODIFIER | NA18956.hp1 | a0002 | a0002c0001 | a0002c0001t0001 | a0002c0001t0001g0039 | 1 | 344 | 0.0029 | -2039 | c.-13 others(19): Show |
MAGEA4 | ENSG00000147381.12 | transcript | ENST00000276344.6 | protein_coding | 1/2 | chrX | TogoVar | |||||||
MACROD2_chr20_13990516_16058197 | 15321085 | GTTTCAAA others(2030): Show |
G | intron_variant | MODIFIER | HG01081.hp1 HG01168.hp2 NA18970.hp2 others(1): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0002a0001c0001t0004a0002c0002t0007others(1): Show | a0001c0001t0002g0015a0001c0001t0004g0016a0002c0002t0007g0013others(1): Show | 4 | 24 | 0.1667 | -2037 | c.540 others(19): Show |
MACROD2 | ENSG00000172264.19 | transcript | ENST00000684519.1 | protein_coding | 6/17 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
TOX4_chr14_21472195_21504170 | 21484465 | CAGCCTCC others(2030): Show |
C | intron_variant | MODIFIER | HG00099.hp2 HG00408.hp1 HG00423.hp2 others(205): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0004 | a0001c0001t0001a0001c0001t0005a0001c0001t0011others(13): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0008others(113): Show | 208 | 400 | 0.5200 | -2037 | c.76- others(14): Show |
TOX4 | ENSG00000092203.15 | transcript | ENST00000448790.7 | protein_coding | 2/8 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
CTNNA1_chr5_138748425_138940034 | 138900379 | TTATGAGA others(2029): Show |
T | intron_variant | MODIFIER | NA20129.hp2 | a0001 | a0001c0002 | a0001c0002t0003 | a0001c0002t0003g0020 | 1 | 180 | 0.0056 | -2036 | c.129 others(19): Show |
CTNNA1 | ENSG00000044115.21 | transcript | ENST00000302763.12 | protein_coding | 9/17 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
PRKCZ_chr1_2045411_2190395 | 2121830 | GTGGTAGT others(2029): Show |
G | intron_variant | MODIFIER | NA18942.hp2 NA18997.hp2 |
a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0098a0001c0002t0001g0102 | 2 | 286 | 0.0070 | -2036 | c.335 others(19): Show |
PRKCZ | ENSG00000067606.17 | transcript | ENST00000378567.8 | protein_coding | 4/17 | chr1 | TogoVar | |||||||
AHI1_chr6_135278532_135502740 | 135287747 | TGAAACTA others(2027): Show |
T | intron_variant | MODIFIER | HG00639.hp1 HG02922.hp2 |
a0001 | a0001c0013a0001c0018 | a0001c0013t0007a0001c0018t0007 | a0001c0013t0007g0168a0001c0018t0007g0175 | 2 | 220 | 0.0091 | -2034 | c.358 others(18): Show |
AHI1 | ENSG00000135541.22 | transcript | ENST00000265602.11 | protein_coding | 28/28 | chr6 | TogoVar | |||||||
DHRSX_chrX_2214506_2505976 | 2278138 | AAGAGAGA others(2026): Show |
A | intron_variant | MODIFIER | HG02293.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0047 | 1 | 50 | 0.0200 | -2033 | c.388 others(19): Show |
DHRSX | ENSG00000169084.15 | transcript | ENST00000334651.11 | protein_coding | 4/6 | chrX | TogoVar | |||||||
GOLGA8B_chr15_34520095_34588651 | 34558804 | TGCTTGCA others(2026): Show |
T | intron_variant | MODIFIER | HG00408.hp1 HG00423.hp2 HG00558.hp1 others(40): Show |
a0002a0003a0012others(3): Show | a0002c0002a0003c0003a0012c0023others(3): Show | a0002c0002t0002a0002c0002t0009a0002c0002t0010others(8): Show | a0002c0002t0002g0001a0002c0002t0002g0002a0002c0002t0002g0006others(38): Show | 43 | 198 | 0.2172 | -2033 | c.-11 others(21): Show |
GOLGA8B | ENSG00000215252.12 | transcript | ENST00000683415.1 | protein_coding | 1/23 | chr15 | TogoVar | |||||||
SLC17A5_chr6_73588379_73658992 | 73630875 | CGTTTCTA others(2026): Show |
C | intron_variant | MODIFIER | HG02559.hp1 HG02896.hp1 HG02897.hp2 |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0096a0001c0001t0002g0097a0001c0001t0002g0099 | 3 | 324 | 0.0093 | -2033 | c.819 others(17): Show |
SLC17A5 | ENSG00000119899.13 | transcript | ENST00000355773.6 | protein_coding | 6/10 | chr6 | TogoVar | |||||||
KANTR_chrX_53089142_53132438 | 53105904 | GTGGAGTG others(2025): Show |
G | intron_variant | MODIFIER | HG01243.hp1 HG01891.hp2 HG02622.hp1 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0005a0001c0001t0017 | a0001c0001t0001g0048a0001c0001t0001g0049a0001c0001t0005g0033others(3): Show | 6 | 249 | 0.0241 | -2032 | c.-80 others(19): Show |
KANTR | ENSG00000232593.8 | transcript | ENST00000604062.7 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
VAV1_chr19_6767708_6862361 | 6779005 | TAGCTGGG others(2025): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG00735.hp2 HG01123.hp2 others(3): Show |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0001a0002c0003t0003 | a0001c0001t0001g0251a0001c0001t0001g0253a0001c0001t0001g0258others(3): Show | 6 | 306 | 0.0196 | -2032 | c.204 others(17): Show |
VAV1 | ENSG00000141968.8 | transcript | ENST00000602142.6 | protein_coding | 1/26 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
EIF3CL_chr16_28374715_28408841 | 28406810 | GATCACCT others(2024): Show |
G | upstream_gene_variant | MODIFIER | HG02895.hp2 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0094 | 1 | 172 | 0.0058 | -2031 | c.-50 others(11): Show |
EIF3CL | ENSG00000205609.13 | transcript | ENST00000380876.5 | protein_coding | 2970 | chr16 | TogoVar | |||||||
PHACTR4_chr1_28364740_28505364 | 28408830 | TATGCCCG others(2024): Show |
T | intron_variant | MODIFIER | HG01071.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0046 | 1 | 228 | 0.0044 | -2031 | c.16+ others(15): Show |
PHACTR4 | ENSG00000204138.13 | transcript | ENST00000373839.8 | protein_coding | 2/13 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
P2RX5_chr17_3668227_3701155 | 3685659 | CCAGCCTG others(2023): Show |
C | intron_variant | MODIFIER | NA20300.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0338 | 1 | 362 | 0.0028 | -2030 | c.981 others(16): Show |
P2RX5 | ENSG00000083454.23 | transcript | ENST00000225328.10 | protein_coding | 9/11 | chr17 | TogoVar | |||||||
IKBKB_chr8_42266302_42337460 | 42298082 | ATGTGAGT others(2022): Show |
A | intron_variant | MODIFIER | HG02074.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0234 | 1 | 278 | 0.0036 | -2029 | c.388 others(17): Show |
IKBKB | ENSG00000104365.16 | transcript | ENST00000520810.6 | protein_coding | 5/21 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
SHISA9_chr16_12896598_13245416 | 13200608 | GCTCCAAG others(2022): Show |
G | intron_variant | MODIFIER | HG00099.hp1 HG00544.hp1 HG00738.hp1 others(51): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(35): Show | a0001c0001t0001g0087a0001c0001t0001g0120a0001c0001t0002g0012others(51): Show | 54 | 214 | 0.2523 | -2029 | c.692 others(16): Show |
SHISA9 | ENSG00000237515.10 | transcript | ENST00000558583.3 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
AZGP1_chr7_99961730_99981031 | 99967078 | GTCCTGCG others(2020): Show |
G | exon_loss_variant | HIGH | NA18952.hp2 NA18984.hp2 |
a0000 | a0000c0007 | a0000c0007t0001 | a0000c0007t0001g0091a0000c0007t0001g0092 | 2 | 432 | 0.0046 | -2027 | c.338 others(11): Show |
AZGP1 | ENSG00000160862.13 | transcript | ENST00000292401.9 | protein_coding | 3/4 | 832/1181 | chr7 | TogoVar | ||||||
DHRSX_chrX_2214506_2505976 | 2280270 | AAGAGAGA others(2019): Show |
A | intron_variant | MODIFIER | NA18522.hp1 | a0002 | a0002c0002 | a0002c0002t0004 | a0002c0002t0004g0035 | 1 | 50 | 0.0200 | -2026 | c.388 others(18): Show |
DHRSX | ENSG00000169084.15 | transcript | ENST00000334651.11 | protein_coding | 4/6 | chrX | TogoVar | |||||||
DHRSX_chrX_2214506_2505976 | 2280317 | GGGAGAGA others(2019): Show |
G | intron_variant | MODIFIER | HG02895.hp1 | a0002 | a0002c0002 | a0002c0002t0004 | a0002c0002t0004g0031 | 1 | 50 | 0.0200 | -2026 | c.388 others(18): Show |
DHRSX | ENSG00000169084.15 | transcript | ENST00000334651.11 | protein_coding | 4/6 | chrX | TogoVar | |||||||
IQCH_chr15_67249786_67506804 | 67355503 | TGGTGTGA others(2019): Show |
T | exon_loss_variant others(4): Show |
HIGH | HG01081.hp1 | a0005 | a0005c0008 | a0005c0008t0001 | a0005c0008t0001g0048 | 1 | 276 | 0.0036 | -2026 | c.638 others(16): Show |
IQCH | ENSG00000103599.20 | transcript | ENST00000335894.9 | protein_coding | 7/21 | chr15 | TogoVar | |||||||
SMKR1_chr7_129497531_129517918 | 129501338 | CGTCACCT others(2019): Show |
C | exon_loss_variant others(1): Show |
HIGH | HG02486.hp2 HG02572.hp1 HG02717.hp2 others(2): Show |
a0002 | a0002c0002 | a0002c0002t0003 | a0002c0002t0003g0013 | 5 | 422 | 0.0119 | -2026 | c.-14 others(11): Show |
SMKR1 | ENSG00000240204.3 | transcript | ENST00000462322.3 | protein_coding | 1/2 | chr7 | TogoVar | |||||||
PEBP1_chr12_118131124_118150584 | 118131321 | CGAGTAGC others(2018): Show |
C | upstream_gene_variant | MODIFIER | HG01109.hp1 HG02970.hp2 NA20300.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0025 | 3 | 426 | 0.0070 | -2025 | c.-48 others(11): Show |
PEBP1 | ENSG00000089220.5 | transcript | ENST00000261313.3 | protein_coding | 4802 | chr12 | TogoVar | |||||||
SPATA5_chr4_122918078_123324433 | 123001925 | CTGTGTGG others(2018): Show |
C | intron_variant | MODIFIER | NA18966.hp2 NA18982.hp2 |
a0001 | a0001c0001 | a0001c0001t0008 | a0001c0001t0008g0091a0001c0001t0008g0092 | 2 | 262 | 0.0076 | -2025 | c.186 others(21): Show |
SPATA5 | ENSG00000145375.9 | transcript | ENST00000274008.5 | protein_coding | 10/15 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
DLGAP2_chr8_732628_1713476 | 1393580 | TGAGTCGT others(2017): Show |
T | intron_variant | MODIFIER | HG02258.hp1 HG02976.hp2 HG03486.hp2 others(2): Show |
a0001a0002 | a0001c0002a0001c0009a0002c0001 | a0001c0002t0001a0001c0002t0002a0001c0002t0022others(2): Show | a0001c0002t0001g0015a0001c0002t0002g0021a0001c0002t0022g0034others(2): Show | 5 | 40 | 0.1250 | -2024 | c.107 others(21): Show |
DLGAP2 | ENSG00000198010.13 | transcript | ENST00000637795.2 | protein_coding | 3/14 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
USP32_chr17_60172327_60397133 | 60334536 | CAAAAAAT others(2017): Show |
C | intron_variant | MODIFIER | HG00639.hp2 HG00642.hp2 HG00738.hp1 others(48): Show |
a0001 | a0001c0001a0001c0005 | a0001c0001t0001a0001c0005t0001 | a0001c0001t0001g0012a0001c0001t0001g0013a0001c0001t0001g0014others(48): Show | 51 | 152 | 0.3355 | -2024 | c.186 others(18): Show |
USP32 | ENSG00000170832.13 | transcript | ENST00000300896.9 | protein_coding | 2/33 | chr17 | TogoVar |