view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
PTP4A2_chr1_31901421_31943368 | 31908111 | AAAATATA others(75): Show |
A | 3_prime_UTR_variant | MODIFIER | HG01081.hp2 HG01106.hp2 HG04115.hp1 |
a0001 | a0001c0001 | a0001c0001t0030a0001c0001t0073 | a0001c0001t0030g0005 a0001c0001t0073g0013 |
3 | 354 | 0.0085 | -82 | c.*65 others(91): Show |
PTP4A2 | ENSG00000184007.22 | transcript | ENST00000647444.2 | protein_coding | 6/6 | 659 | chr1 | TogoVar | ||||||
PTP4A2_chr1_31901421_31943368 | 31908113 | AATATATA others(75): Show |
A | 3_prime_UTR_variant | MODIFIER | HG03453.hp1 | a0001 | a0001c0001 | a0001c0001t0158 | a0001c0001t0158g0015 | 1 | 354 | 0.0028 | -82 | c.*65 others(91): Show |
PTP4A2 | ENSG00000184007.22 | transcript | ENST00000647444.2 | protein_coding | 6/6 | 657 | chr1 | TogoVar | ||||||
PXDN_chr2_1626887_1749515 | 1703714 | GGGGGGGC others(75): Show |
G | intron_variant | MODIFIER | HG03195.hp2 | a0001 | a0001c0006 | a0001c0006t0027 | a0001c0006t0027g0304 | 1 | 322 | 0.0031 | -82 | c.201 others(101): Show |
PXDN | ENSG00000130508.11 | transcript | ENST00000252804.9 | protein_coding | 1/22 | chr2 | TogoVar | |||||||
RASA3_chr13_113972783_114137623 | 114103682 | TGATGACA others(75): Show |
T | intron_variant | MODIFIER | HG02738.hp1 | a0001 | a0001c0005 | a0001c0005t0001 | a0001c0005t0001g0016 | 1 | 67 | 0.0149 | -82 | c.55+ others(99): Show |
RASA3 | ENSG00000185989.11 | transcript | ENST00000334062.8 | protein_coding | 1/23 | chr13 | TogoVar | |||||||
RBFOX1_chr16_6014024_7718340 | 7029139 | TGTGTATA others(75): Show |
T | intron_variant | MODIFIER | HG02630.hp1 HG03453.hp1 |
a0001 | a0001c0001 | a0001c0001t0007a0001c0001t0008 | a0001c0001t0007g0039 a0001c0001t0008g0034 |
2 | 68 | 0.0294 | -82 | c.-15 others(101): Show |
RBFOX1 | ENSG00000078328.23 | transcript | ENST00000550418.6 | protein_coding | 3/15 | chr16 | TogoVar | |||||||
RBM20_chr10_110639336_110844468 | 110767084 | CCCCCCCA others(75): Show |
C | intron_variant | MODIFIER | HG01175.hp2 HG01516.hp2 |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0003t0001 | a0001c0001t0001g0100 a0001c0003t0001g0026 |
2 | 268 | 0.0075 | -82 | c.192 others(101): Show |
RBM20 | ENSG00000203867.8 | transcript | ENST00000369519.4 | protein_coding | 1/13 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
RNFT2_chr12_116733315_116858631 | 116841812 | TATATAAA others(75): Show |
T | intron_variant | MODIFIER | HG03130.hp2 | a0001 | a0001c0001 | a0001c0001t0045 | a0001c0001t0045g0114 | 1 | 268 | 0.0037 | -82 | c.120 others(101): Show |
RNFT2 | ENSG00000135119.15 | transcript | ENST00000257575.9 | protein_coding | 10/10 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
RPS6KA6_chrX_84053350_84193199 | 84191533 | TATATATA others(75): Show |
T | upstream_gene_variant | MODIFIER | HG02280.hp2 | a0001 | a0001c0001 | a0001c0001t0090 | a0001c0001t0090g0081 | 1 | 272 | 0.0037 | -82 | c.-37 others(93): Show |
RPS6KA6 | ENSG00000072133.12 | transcript | ENST00000262752.5 | protein_coding | 3335 | chrX | TogoVar | |||||||
RPS6KA6_chrX_84053350_84193199 | 84191659 | TATATATA others(75): Show |
T | upstream_gene_variant | MODIFIER | HG01069.hp1 HG01123.hp1 HG01243.hp1 others(3): Show |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0005a0001c0001t0027a0001c0001t0028others(2): Show | a0001c0001t0005g0171 a0001c0001t0005g0227 a0001c0001t0027g0170 others(3): Show |
6 | 272 | 0.0221 | -82 | c.-38 others(93): Show |
RPS6KA6 | ENSG00000072133.12 | transcript | ENST00000262752.5 | protein_coding | 3461 | chrX | TogoVar | |||||||
RPS6KA6_chrX_84053350_84193199 | 84191783 | TATATATA others(75): Show |
T | upstream_gene_variant | MODIFIER | HG03041.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0188 | 1 | 272 | 0.0037 | -82 | c.-39 others(93): Show |
RPS6KA6 | ENSG00000072133.12 | transcript | ENST00000262752.5 | protein_coding | 3585 | chrX | TogoVar | |||||||
RSU1_chr10_16585611_16822424 | 16645924 | ATATACAC others(75): Show |
A | intron_variant | MODIFIER | HG00140.hp2 HG01070.hp2 HG01884.hp2 others(5): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0004a0001c0001t0011a0001c0001t0034others(4): Show | a0001c0001t0004g0022 a0001c0001t0011g0030 a0001c0001t0011g0032 others(5): Show |
8 | 190 | 0.0421 | -82 | c.731 others(101): Show |
RSU1 | ENSG00000148484.18 | transcript | ENST00000345264.10 | protein_coding | 8/8 | chr10 | TogoVar | |||||||
SAMD9_chr7_93094518_93122979 | 93117721 | GTCTAGAA others(75): Show |
G | intron_variant | MODIFIER | HG01123.hp1 | a0002 | a0002c0003 | a0002c0003t0002 | a0002c0003t0002g0050 | 1 | 392 | 0.0026 | -82 | c.-11 others(98): Show |
SAMD9 | ENSG00000205413.8 | transcript | ENST00000379958.3 | protein_coding | 1/2 | chr7 | TogoVar | |||||||
SASH3_chrX_129774949_129800201 | 129789075 | CTGGGCAA others(75): Show |
C | intron_variant | MODIFIER | HG03942.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0185 | 1 | 307 | 0.0033 | -82 | c.300 others(97): Show |
SASH3 | ENSG00000122122.10 | transcript | ENST00000356892.4 | protein_coding | 3/7 | chrX | TogoVar | |||||||
SATB2_chr2_199264505_199462939 | 199361924 | AGATGGGG others(75): Show |
A | intron_variant | MODIFIER | HG03239.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0175 | 1 | 254 | 0.0039 | -82 | c.700 others(99): Show |
SATB2 | ENSG00000119042.18 | transcript | ENST00000417098.6 | protein_coding | 6/10 | chr2 | TogoVar | |||||||
SAXO1_chr9_18922650_19038209 | 18942027 | CCAACTCA others(75): Show |
C | intron_variant | MODIFIER | HG00099.hp2 HG01070.hp1 HG01074.hp1 others(46): Show |
a0001a0002a0003others(6): Show | a0001c0001a0002c0002a0003c0003others(6): Show | a0001c0001t0006a0001c0001t0008a0001c0001t0012others(22): Show | a0001c0001t0006g0141 a0001c0001t0008g0104 a0001c0001t0008g0105 others(45): Show |
49 | 364 | 0.1346 | -82 | c.219 others(97): Show |
SAXO1 | ENSG00000155875.15 | transcript | ENST00000380534.9 | protein_coding | 2/3 | chr9 | TogoVar | |||||||
SCFD2_chr4_52867982_53371061 | 53237775 | CCCCCCCA others(75): Show |
C | intron_variant | MODIFIER | NA18970.hp2 NA19060.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0054 a0001c0001t0001g0055 |
2 | 162 | 0.0124 | -82 | c.131 others(103): Show |
SCFD2 | ENSG00000184178.17 | transcript | ENST00000401642.8 | protein_coding | 4/8 | chr4 | TogoVar | |||||||
SCN9A_chr2_166190185_166380944 | 166191652 | TATATATA others(75): Show |
T | downstream_gene_variant | MODIFIER | HG03710.hp1 | a0001 | a0001c0001 | a0001c0001t0015 | a0001c0001t0015g0149 | 1 | 296 | 0.0034 | -82 | c.*69 others(93): Show |
SCN9A | ENSG00000169432.19 | transcript | ENST00000642356.2 | protein_coding | 3532 | chr2 | TogoVar | |||||||
SCNN1D_chr1_1275436_1297025 | 1276537 | GGCATGAT others(75): Show |
G | upstream_gene_variant | MODIFIER | HG02451.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0243 | 1 | 290 | 0.0035 | -82 | c.-41 others(93): Show |
SCNN1D | ENSG00000162572.21 | transcript | ENST00000379116.10 | protein_coding | 3898 | chr1 | TogoVar | |||||||
SDK1_chr7_3296252_4274000 | 4194328 | GTATGTGT others(75): Show |
G | intron_variant | MODIFIER | HG00558.hp2 HG00639.hp1 HG01081.hp1 others(31): Show |
a0001a0002a0003others(10): Show | a0001c0004a0001c0005a0001c0010others(28): Show | a0001c0004t0001a0001c0005t0001a0001c0005t0051others(31): Show | a0001c0004t0001g0039 a0001c0005t0001g0023 a0001c0005t0051g0030 others(31): Show |
34 | 116 | 0.2931 | -82 | c.509 others(103): Show |
SDK1 | ENSG00000146555.20 | transcript | ENST00000404826.7 | protein_coding | 35/44 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
SEC23A_chr14_39026919_39108235 | 39094227 | TATATATA others(75): Show |
T | intron_variant | MODIFIER | NA20905.hp2 | a0001 | a0001c0003 | a0001c0003t0001 | a0001c0003t0001g0072 | 1 | 366 | 0.0027 | -82 | c.222 others(98): Show |
SEC23A | ENSG00000100934.15 | transcript | ENST00000307712.11 | protein_coding | 2/19 | chr14 | TogoVar | |||||||
SEMA5A_chr5_9030033_9551075 | 9191881 | AGTGTGAG others(75): Show |
A | intron_variant | MODIFIER | HG03471.hp1 | a0001 | a0001c0001 | a0001c0001t0035 | a0001c0001t0035g0059 | 1 | 134 | 0.0075 | -82 | c.106 others(101): Show |
SEMA5A | ENSG00000112902.12 | transcript | ENST00000382496.10 | protein_coding | 10/22 | chr5 | TogoVar | |||||||
SEMA5A_chr5_9030033_9551075 | 9380874 | GAGTGTAA others(75): Show |
G | intron_variant | MODIFIER | HG04115.hp2 | a0001 | a0001c0006 | a0001c0006t0001 | a0001c0006t0001g0024 | 1 | 134 | 0.0075 | -82 | c.-77 others(97): Show |
SEMA5A | ENSG00000112902.12 | transcript | ENST00000382496.10 | protein_coding | 2/22 | chr5 | TogoVar | |||||||
SEPTIN8_chr5_132745819_132782239 | 132770055 | GTGTGTGT others(75): Show |
G | intron_variant | MODIFIER | HG03579.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0079 | 1 | 326 | 0.0031 | -82 | c.31- others(97): Show |
SEPTIN8 | ENSG00000164402.14 | transcript | ENST00000378719.7 | protein_coding | 1/9 | chr5 | TogoVar | |||||||
SETX_chr9_132256356_132359986 | 132269836 | CGAGACAC others(75): Show |
C | intron_variant | MODIFIER | HG00099.hp2 HG00323.hp2 HG00408.hp1 others(175): Show |
a0002a0003a0004others(18): Show | a0002c0002a0003c0003a0003c0024others(23): Show | a0002c0002t0003a0002c0002t0014a0002c0002t0024others(30): Show | a0002c0002t0003g0004 a0002c0002t0003g0006 a0002c0002t0003g0007 others(174): Show |
178 | 362 | 0.4917 | -82 | c.720 others(99): Show |
SETX | ENSG00000107290.14 | transcript | ENST00000224140.6 | protein_coding | 24/25 | chr9 | TogoVar | |||||||
SFSWAP_chr12_131706090_131804738 | 131734788 | TCTCCCTG others(75): Show |
T | intron_variant | MODIFIER | HG01361.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0201 | 1 | 318 | 0.0031 | -82 | c.108 others(101): Show |
SFSWAP | ENSG00000061936.10 | transcript | ENST00000261674.9 | protein_coding | 7/17 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
SGK1_chr6_134164256_134323112 | 134213549 | AATGTCCT others(75): Show |
A | intron_variant | MODIFIER | HG01517.hp1 HG03831.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0154 a0001c0001t0001g0222 |
2 | 250 | 0.0080 | -82 | c.286 others(99): Show |
SGK1 | ENSG00000118515.12 | transcript | ENST00000367858.10 | protein_coding | 2/13 | chr6 | TogoVar | |||||||
SGTA_chr19_2749715_2788273 | 2772765 | ATGGGTGA others(75): Show |
A | intron_variant | MODIFIER | HG00621.hp2 HG01261.hp2 HG02080.hp1 others(34): Show |
a0001 | a0001c0003a0001c0004 | a0001c0003t0003a0001c0003t0005a0001c0003t0021others(2): Show | a0001c0003t0003g0029 a0001c0003t0003g0030 a0001c0003t0003g0031 others(34): Show |
37 | 396 | 0.0934 | -82 | c.-23 others(99): Show |
SGTA | ENSG00000104969.11 | transcript | ENST00000221566.7 | protein_coding | 1/11 | chr19 | TogoVar | |||||||
SGTA_chr19_2749715_2788273 | 2772970 | GTGGGTGA others(75): Show |
G | intron_variant | MODIFIER | HG02165.hp1 HG02922.hp1 NA18522.hp2 others(2): Show |
a0001 | a0001c0002a0001c0003a0001c0005 | a0001c0002t0002a0001c0003t0004a0001c0005t0002 | a0001c0002t0002g0075 a0001c0002t0002g0078 a0001c0002t0002g0080 others(2): Show |
5 | 396 | 0.0126 | -82 | c.-23 others(99): Show |
SGTA | ENSG00000104969.11 | transcript | ENST00000221566.7 | protein_coding | 1/11 | chr19 | TogoVar | |||||||
SGTA_chr19_2749715_2788273 | 2773238 | AGGGACAC others(75): Show |
A | intron_variant | MODIFIER | NA20752.hp1 | a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0080 | 1 | 396 | 0.0025 | -82 | c.-23 others(99): Show |
SGTA | ENSG00000104969.11 | transcript | ENST00000221566.7 | protein_coding | 1/11 | chr19 | TogoVar | |||||||
SGTA_chr19_2749715_2788273 | 2773585 | GTGGGTGA others(75): Show |
G | intron_variant | MODIFIER | HG00099.hp1 HG00423.hp2 HG00438.hp2 others(69): Show |
a0001 | a0001c0002a0001c0003a0001c0005others(3): Show | a0001c0002t0002a0001c0003t0003a0001c0005t0002others(3): Show | a0001c0002t0002g0001 a0001c0002t0002g0003 a0001c0002t0002g0010 others(55): Show |
72 | 396 | 0.1818 | -82 | c.-23 others(99): Show |
SGTA | ENSG00000104969.11 | transcript | ENST00000221566.7 | protein_coding | 1/11 | chr19 | TogoVar | |||||||
SGTA_chr19_2749715_2788273 | 2773594 | ACGGCCAC others(75): Show |
A | intron_variant | MODIFIER | HG00280.hp2 NA18612.hp1 NA18954.hp2 others(3): Show |
a0001 | a0001c0002 | a0001c0002t0002a0001c0002t0019 | a0001c0002t0002g0022 a0001c0002t0002g0085 a0001c0002t0002g0086 others(2): Show |
6 | 396 | 0.0152 | -82 | c.-23 others(99): Show |
SGTA | ENSG00000104969.11 | transcript | ENST00000221566.7 | protein_coding | 1/11 | chr19 | TogoVar | |||||||
SGTA_chr19_2749715_2788273 | 2773872 | GTGGGTGA others(75): Show |
G | intron_variant | MODIFIER | HG03579.hp2 | a0001 | a0001c0003 | a0001c0003t0005 | a0001c0003t0005g0335 | 1 | 396 | 0.0025 | -82 | c.-23 others(99): Show |
SGTA | ENSG00000104969.11 | transcript | ENST00000221566.7 | protein_coding | 1/11 | chr19 | TogoVar | |||||||
SGTA_chr19_2749715_2788273 | 2773900 | TCCGAGGG others(75): Show |
T | intron_variant | MODIFIER | NA18522.hp2 NA18948.hp1 NA18952.hp2 others(5): Show |
a0001a0003 | a0001c0003a0003c0013 | a0001c0003t0003a0001c0003t0004a0003c0013t0003 | a0001c0003t0003g0052 a0001c0003t0003g0154 a0001c0003t0003g0155 others(5): Show |
8 | 396 | 0.0202 | -82 | c.-23 others(99): Show |
SGTA | ENSG00000104969.11 | transcript | ENST00000221566.7 | protein_coding | 1/11 | chr19 | TogoVar | |||||||
SH2D1A_chrX_124341563_124378160 | 124350595 | GAATATAT others(75): Show |
G | intron_variant | MODIFIER | HG03098.hp1 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0154 | 1 | 318 | 0.0031 | -82 | c.137 others(99): Show |
SH2D1A | ENSG00000183918.18 | transcript | ENST00000371139.9 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||||
SHOX_chrX_625791_656584 | 647191 | CTCAGCCT others(75): Show |
C | 3_prime_UTR_variant | MODIFIER | HG01361.hp1 HG02886.hp1 HG02886.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0016a0001c0001t0102a0001c0001t0146others(2): Show | a0001c0001t0016g0069 a0001c0001t0016g0074 a0001c0001t0102g0100 others(3): Show |
6 | 220 | 0.0273 | -82 | c.*28 others(93): Show |
SHOX | ENSG00000185960.15 | transcript | ENST00000686671.1 | protein_coding | 5/5 | 2804 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
SHOX_chrX_625791_656584 | 647604 | GGCCTCCC others(75): Show |
G | 3_prime_UTR_variant | MODIFIER | HG00099.hp1 HG00323.hp1 HG00558.hp2 others(37): Show |
a0001a0002a0005 | a0001c0001a0002c0002a0005c0004 | a0001c0001t0001a0001c0001t0006a0001c0001t0055others(31): Show | a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0001g0028 others(36): Show |
40 | 220 | 0.1818 | -82 | c.*30 others(93): Show |
SHOX | ENSG00000185960.15 | transcript | ENST00000686671.1 | protein_coding | 5/5 | 3050 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
SHOX_chrX_625791_656584 | 647768 | GGCCTCCC others(75): Show |
G | 3_prime_UTR_variant | MODIFIER | HG02257.hp2 HG02809.hp1 HG02886.hp1 others(7): Show |
a0001 | a0001c0001 | a0001c0001t0016a0001c0001t0084a0001c0001t0087others(6): Show | a0001c0001t0016g0069 a0001c0001t0016g0074 a0001c0001t0084g0048 others(7): Show |
10 | 220 | 0.0455 | -82 | c.*32 others(93): Show |
SHOX | ENSG00000185960.15 | transcript | ENST00000686671.1 | protein_coding | 5/5 | 3201 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
SHOX_chrX_625791_656584 | 647850 | AGCCTCCC others(75): Show |
A | 3_prime_UTR_variant | MODIFIER | HG00544.hp1 HG00558.hp1 HG02165.hp2 |
a0001 | a0001c0001 | a0001c0001t0139a0001c0001t0147a0001c0001t0148 | a0001c0001t0139g0085 a0001c0001t0147g0210 a0001c0001t0148g0183 |
3 | 220 | 0.0136 | -82 | c.*33 others(93): Show |
SHOX | ENSG00000185960.15 | transcript | ENST00000686671.1 | protein_coding | 5/5 | 3385 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
SHOX_chrX_625791_656584 | 648103 | TGAGTAGC others(75): Show |
T | 3_prime_UTR_variant | MODIFIER | NA19060.hp1 | a0001 | a0001c0001 | a0001c0001t0135 | a0001c0001t0135g0107 | 1 | 220 | 0.0046 | -82 | c.*35 others(93): Show |
SHOX | ENSG00000185960.15 | transcript | ENST00000686671.1 | protein_coding | 5/5 | 3529 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
SIRT2_chr19_38873560_38904618 | 38902484 | TGCTTTTG others(75): Show |
T | upstream_gene_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(337): Show |
a0001a0002a0003others(5): Show | a0001c0001a0001c0003a0002c0002others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(13): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0009 others(254): Show |
340 | 426 | 0.7981 | -82 | c.-30 others(93): Show |
SIRT2 | ENSG00000068903.21 | transcript | ENST00000249396.12 | protein_coding | 2867 | chr19 | TogoVar | |||||||
SLC22A1_chr6_160116815_160163718 | 160125692 | GTGCTAAG others(75): Show |
G | intron_variant | MODIFIER | NA18989.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0234 | 1 | 416 | 0.0024 | -82 | c.411 others(99): Show |
SLC22A1 | ENSG00000175003.15 | transcript | ENST00000366963.9 | protein_coding | 1/10 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | ||||||
SLC22A1_chr6_160116815_160163718 | 160126674 | CTGGTGCT others(75): Show |
C | intron_variant | MODIFIER | HG02055.hp2 HG02622.hp2 HG02976.hp2 others(2): Show |
a0001 | a0001c0012a0001c0024a0001c0025 | a0001c0012t0001a0001c0024t0001a0001c0025t0001 | a0001c0012t0001g0337 a0001c0012t0001g0339 a0001c0012t0001g0340 others(2): Show |
5 | 416 | 0.0120 | -82 | c.412 others(99): Show |
SLC22A1 | ENSG00000175003.15 | transcript | ENST00000366963.9 | protein_coding | 1/10 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | ||||||
SLC29A4_chr7_5277943_5311912 | 5282364 | AGGAAGAG others(75): Show |
A | upstream_gene_variant | MODIFIER | NA18975.hp2 | a0001 | a0001c0001 | a0001c0001t0188 | a0001c0001t0188g0024 | 1 | 408 | 0.0025 | -82 | c.-72 others(91): Show |
SLC29A4 | ENSG00000164638.11 | transcript | ENST00000396872.8 | protein_coding | 578 | chr7 | TogoVar | |||||||
SLC6A3_chr5_1387794_1450440 | 1392895 | CCCCTCCC others(75): Show |
C | 3_prime_UTR_variant | MODIFIER | HG03195.hp1 HG03516.hp2 |
a0001 | a0001c0002 | a0001c0002t0023 | a0001c0002t0023g0172 a0001c0002t0023g0173 |
2 | 373 | 0.0054 | -82 | c.*17 others(93): Show |
SLC6A3 | ENSG00000142319.18 | transcript | ENST00000270349.12 | protein_coding | 15/15 | 1758 | chr5 | TogoVar | ||||||
SMOC2_chr6_168436184_168672992 | 168654063 | CTCCTGAG others(75): Show |
C | intron_variant | MODIFIER | HG00099.hp2 HG00738.hp2 HG01081.hp2 others(5): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0004a0001c0003t0004 | a0001c0001t0001g0094 a0001c0001t0001g0142 a0001c0001t0004g0118 others(5): Show |
8 | 180 | 0.0444 | -82 | c.128 others(99): Show |
SMOC2 | ENSG00000112562.20 | transcript | ENST00000356284.7 | protein_coding | 11/12 | chr6 | TogoVar | |||||||
SMOC2_chr6_168436184_168672992 | 168654514 | TACCTGAG others(75): Show |
T | intron_variant | MODIFIER | HG02109.hp2 | a0001 | a0001c0002 | a0001c0002t0002 | a0001c0002t0002g0039 | 1 | 180 | 0.0056 | -82 | c.128 others(101): Show |
SMOC2 | ENSG00000112562.20 | transcript | ENST00000356284.7 | protein_coding | 11/12 | INFO_REALIGN_3_PRIME | chr6 | TogoVar | ||||||
SMYD3_chr1_245744347_246512279 | 246395642 | ACAGTCAG others(75): Show |
A | intron_variant | MODIFIER | HG00597.hp1 HG00738.hp2 HG01081.hp2 others(32): Show |
a0001a0002a0004 | a0001c0001a0001c0002a0001c0012others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0002t0001others(7): Show | a0001c0001t0001g0008 a0001c0001t0001g0036 a0001c0001t0001g0042 others(32): Show |
35 | 150 | 0.2333 | -82 | c.165 others(101): Show |
SMYD3 | ENSG00000185420.19 | transcript | ENST00000490107.6 | protein_coding | 1/11 | chr1 | TogoVar | |||||||
SOGA1_chr20_36772447_36868538 | 36858393 | AACACACA others(75): Show |
A | intron_variant | MODIFIER | HG01070.hp1 HG01516.hp1 HG01517.hp1 others(8): Show |
a0001a0002 | a0001c0001a0001c0007a0001c0009others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0035others(4): Show | a0001c0001t0001g0205 a0001c0001t0001g0207 a0001c0001t0001g0209 others(8): Show |
11 | 282 | 0.0390 | -82 | c.687 others(99): Show |
SOGA1 | ENSG00000149639.15 | transcript | ENST00000237536.9 | protein_coding | 1/14 | chr20 | TogoVar | |||||||
SORCS2_chr4_7187538_7747827 | 7724539 | GTGATAGT others(75): Show |
G | intron_variant | MODIFIER | HG02280.hp1 HG03209.hp2 NA18522.hp1 |
a0001a0005 | a0001c0001a0001c0037a0005c0020 | a0001c0001t0013a0001c0037t0020a0005c0020t0020 | a0001c0001t0013g0125 a0001c0037t0020g0017 a0005c0020t0020g0037 |
3 | 168 | 0.0179 | -82 | c.261 others(99): Show |
SORCS2 | ENSG00000184985.17 | transcript | ENST00000507866.6 | protein_coding | 19/26 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | ||||||
SPPL2B_chr19_2323684_2360095 | 2347755 | CTCTCTCC others(75): Show |
C | intron_variant | MODIFIER | HG03041.hp2 | a0002 | a0002c0005 | a0002c0005t0004 | a0002c0005t0004g0183 | 1 | 414 | 0.0024 | -82 | c.135 others(101): Show |
SPPL2B | ENSG00000005206.17 | transcript | ENST00000613503.5 | protein_coding | 13/14 | INFO_REALIGN_3_PRIME | chr19 | TogoVar |